©2022-2024 Deplancke lab, EPFL, 1015 Lausanne
| Reference | Phenotypes | Categories | Status | Publication date | Submitted by | |
|---|---|---|---|---|---|---|
| Howick et al., 2017 The genetic architecture of defence as resistance to and tolerance of bacterial infection in Drosophila melanogaster [10.1111/mec.14017][FBrf0235063] |
BacterialLoad_PR BacterialLoad_PR_ADJ Tolerance_PRettgeri pc_Surv_PRettgeri pc_Surv_PRettgeriADJ | Immunity Resistance | Curated |
2017-02-28 | Roel Bevers | |
| Najarro et al., 2017 Loci Contributing to Boric Acid Toxicity in Two Reference Populations of Drosophila melanogaster [10.1534/g3.117.041418][FBrf0235744] |
LifespanBoricAcid | Resistance Toxicity | Curated |
2017-05-31 | Roel Bevers | |
| Jordan et al., 2012 Genome-Wide Association for Sensitivity to Chronic Oxidative Stress in Drosophila melanogaster [10.1371/journal.pone.0038722][FBrf0218606] |
mn_NegGeotaxis_CTRL mn_NegGeotaxis_MSB mn_StartleResp_CTRL mn_StartleResp_MSB | Locomotion Ageing Resistance Life history traits | Curated |
2012-06-07 | Roel Bevers | |
| He et al., 2016 Epistatic partners of neurogenic genes modulate Drosophila olfactory behavior [10.1111/gbb.12279][FBrf0230854] |
Canton S(B)/DGRP Sema-5cBG2386/DGRP neurBG2391/DGRP | Behaviour | Under curation |
2016-01-31 | romain.rochepeau | |
| Shorter et al., 2015 Genetic architecture of natural variation in Drosophila melanogaster aggressive behavior [10.1073/pnas.1510104112][FBrf0228967] |
mn_AggressionScore | Behaviour | Curated |
2015-07-06 | Roel Bevers | |
| Morozova et al., 2015 Polymorphisms in early neurodevelopmental genes affect natural variation in alcohol sensitivity in adult drosophila [10.1186/s12864-015-2064-5][FBrf0229987] |
mn_AlcoholSens_E1 mn_AlcoholSens_E2 mn_AlcoholTolerance se_AlcoholSens_E1 se_AlcoholSens_E2 se_AlcoholTolerance | Metabolism Resistance Toxicity | Curated |
2015-11-30 | Roel Bevers | |
| Wang et al., 2017 The genetic basis for variation in resistance to infection in the Drosophila melanogaster genetic reference panel [10.1371/journal.ppat.1006260][FBrf0235068] |
LT50_Metarhizium_Ani LT50_Pseudomonas_Aer | Resistance Immunity | Curated |
2017-03-02 | Roel Bevers | |
| Battlay et al., 2016 Genomic and Transcriptomic Associations Identify a New Insecticide Resistance Phenotype for the Selective Sweep at the Cyp6g1 Locus of Drosophila melanogaster [10.1534/g3.116.031054][FBrf0233124] |
LD50_Azinphos_Methyl mn_Surv_Azinpho_0_25 mn_Surv_Azinpho_0_5 mn_Surv_Azinpho_1_0 mn_Surv_Azinpho_2_0 | Resistance Toxicity Metabolism | Curated |
2016-07-31 | Roel Bevers | |
| Carbone et al., 2016 Genetic architecture of natural variation in visual senescence in Drosophila [10.1073/pnas.1613833113][FBrf0233864] |
mn_PhototaxDark_wk1 mn_PhototaxLight_wk1 mn_PhototaxisScor_1w mn_PhototaxisScor_2w mn_PhototaxisScor_4w se_PhototaxDark_wk1 se_PhototaxLight_wk1 se_PhototaxisScor_1w se_PhototaxisScor_2w se_PhototaxisScor_4w | Ageing Sensory Life history traits | Curated |
2016-10-24 | Roel Bevers | |
| Lavoy et al., 2018 Genetic Modifiers of Neurodegeneration in a Drosophila Model of Parkinson’s Disease [10.1534/genetics.118.301119][FBrf0239578] |
W2 Vial 1 ascension (cm) W2 Vial 2 ascension (cm) W2 Vial 3 ascension (cm) W2 Vial 4 ascension (cm) W6 Vial 1 ascension (cm) W6 Vial 2 ascension (cm) W6 Vial 3 ascension (cm) W6 Vial 4 ascension (cm) Week 2 mean ascension (cm) Week 6 mean ascension (cm) | Behaviour | Under curation |
2018-07-31 | romain.rochepeau | |
| Davis et al., 2021 Characterizing dopaminergic neuron vulnerability using genome-wide analysis [10.1093/genetics/iyab081][FBrf0252031] |
AVG PPL1 neurons | Behaviour | Under curation |
2021-08-08 | romain.rochepeau | |
| Duneau et al., 2018 Signatures of insecticide selection in the genome of Drosophila melanogaster [10.1101/287250] |
Delta_Alive.at.48h Experience 1 Delta_Alive.at.48h Experience 2 Delta_Alive.at.48h Experience 3 Delta_Alive.at.48h Experience 4 Delta_Alive.at.48h Experience 5 Delta_Death.at.48h Experience 1 Delta_Death.at.48h Experience 2 Delta_Death.at.48h Experience 3 Delta_Death.at.48h Experience 4 Delta_Death.at.48h Experience 5 Sample.size Experience 1 Sample.size Experience 2 Sample.size Experience 3 Sample.size Experience 4 Sample.size Experience 5 | Resistance | Under curation |
2018-03-22 | romain.rochepeau | |
| Watanabe et al., 2018 Genetic networks underlying natural variation in basal and induced activity levels in Drosophila melanogaster [10.1101/444380] |
ActivityTotal_2hrs Activity_5min Treatment | Behaviour | Under curation |
2018-10-15 | romain.rochepeau | |
| Chi et al., 2021 RNA-binding protein syncrip regulates starvation-induced hyperactivity in adult Drosophila [10.1371/journal.pgen.1009396][FBrf0248324] |
Baseline_mean Baseline_sem DA_mean DA_sem Starvation Resistance | Behaviour | Under curation |
2021-02-21 | romain.rochepeau | |
| Zhou et al., 2016 The Genetic Basis for Variation in Sensitivity to Lead Toxicity in Drosophila melanogaster [10.1289/ehp.1510513][FBrf0233045] |
gp_Dev_Time_Lead gp_Viability_Lead mn_Dev_Time mn_Dev_Time_Lead mn_Tot_Activity mn_Tot_Activity_Lead mn_Viability mn_Viability_Lead | Toxicity Life history traits | Curated |
2016-06-30 | Roel Bevers | |
| Mitchell et al., 2017 α-amanitin resistance in Drosophila melanogaster: A genome-wide association approach [10.1371/journal.pone.0173162][FBrf0234898] |
LC50_Alpha_Amanitin Surv_AAmanitin_0_2ug Surv_AAmanitin_2ug | Resistance Toxicity | Curated |
2017-02-26 | Roel Bevers | |
| Morgante et al., 2015 Genetic Architecture of Micro-Environmental Plasticity in Drosophila melanogaster [10.1038/srep09785][FBrf0228381] |
ChillComaRec StartleRes StarvationRes sd_ChillComaRec sd_StartleRes sd_StarvationRes se_ChillComaRec se_StartleRes se_StarvationRes | Resistance Behaviour Locomotion | Curated |
2015-09-21 | Roel Bevers | |
| Campbell et al., 2019 Genome-Wide Association Analysis of Anoxia Tolerance in Drosophila melanogaster [10.1534/g3.119.400421][FBrf0243370] |
Mean SE Variance | Resistance | Under curation |
2019-08-31 | romain.rochepeau | |
| Dembeck et al., 2015 Genetic architecture of natural variation in cuticular hydrocarbon composition in Drosophila melanogaster [10.7554/eLife.09861][FBrf0230707] |
Cuticul_11_9_Me_C23 Cuticul_13_11_Me_C25 Cuticul_2_Me_C22 Cuticul_2_Me_C24 Cuticul_2_Me_C25 Cuticul_2_Me_C26 Cuticul_2_Me_C26_C27 Cuticul_2_Me_C27_C28 Cuticul_2_Me_C28_C29 Cuticul_2_Me_C29_C30 Cuticul_2_Me_C30 Cuticul_3_Me_C23 Cuticul_3_Me_C23_C24 Cuticul_3_Me_C25 Cuticul_3_Me_C25_C26 Cuticul_3_Me_C27_C28 Cuticul_5_9_C25_1_2 Cuticul_5_9_C27_1_2 Cuticul_5_9_C29_1_2 Cuticul_5_C23_1 Cuticul_5_C24_1 Cuticul_5_C25_1 Cuticul_5_C27_1 Cuticul_5_Me_C25 Cuticul_6_10_C25_2 Cuticul_6_10_C26_2 Cuticul_6_C23_1 Cuticul_6_C24_1 Cuticul_6_C26_1 Cuticul_7_11_C23_2 Cuticul_7_11_C24_2 Cuticul_7_11_C25_2 Cuticul_7_11_C26_2 Cuticul_7_11_C31_2 Cuticul_7_C23_1 Cuticul_7_C24_1 Cuticul_7_C25_1 Cuticul_7_C26_1 Cuticul_7_C27_1 Cuticul_7_C29_1 Cuticul_8_12_C26_2 Cuticul_8_12_C28_2 Cuticul_8_C25_1 Cuticul_9_13_C25_2 Cuticul_9_13_C27_2 Cuticul_9_C23_1 Cuticul_9_C25_1 Cuticul_NI_20 Cuticul_NI_33 Cuticul_NI_34 Cuticul_NI_54 Cuticul_NI_7 Cuticul_n_C21 Cuticul_n_C22 Cuticul_n_C23 Cuticul_n_C24 Cuticul_n_C25 Cuticul_n_C26 Cuticul_n_C27 Cuticul_n_C28 Cuticul_n_C29 Cuticul_n_C31 Cuticul_x_C22_1_l2 Cuticul_x_C22_1_l3 Cuticul_x_C23_1 Cuticul_x_y_C24_2 | Appearance Anatomy | Curated |
2015-11-13 | Roel Bevers | |
| Spierer et al., 2021 Natural variation in the regulation of neurodevelopmental genes modifies flight performance in Drosophila [10.1371/journal.pgen.1008887][FBrf0248437] |
Flight phenotype score | Behaviour | Under curation |
2021-03-17 | romain.rochepeau | |
| Okada et al., 2019 Sex‐dependent and sex‐independent regulatory systems of size variation in natural populations [10.15252/msb.20199012][FBrf0244128] |
absoluteCS relativeCS wing.size | Appearance | Under curation |
2019-10-31 | romain.rochepeau | |
| Green et al., 2018 Cisand trans-acting variants contribute to survivorship in a naïve Drosophila melanogasterpopulation exposed to ryanoid insecticides [10.1101/502161] |
0.5μg/mL survivorship phenotype 1μg/mL survivorship phenotype 2μg/mL survivorship phenotype 3μg/mL survivorship phenotype 4μg/mL survivorship phenotype 5μg/mL survivorship phenotype LC50 phenotype | Resistance Metabolism | Under curation |
2018-12-19 | romain.rochepeau | |
| Rajpurohit et al., 2018 Spatiotemporal dynamics and genome-wide association analysis of desiccation tolerance in Drosophila melanogaster [10.1111/mec.14814][FBrf0239872] |
Dessication Survival (in hours) In(2L)t In(2R)NS In(2R)Y1 In(2R)Y2 In(2R)Y3 In(2R)Y4 In(2R)Y5 In(2R)Y6 In(2R)Y7 In(3L)M In(3L)P In(3L)Y In(3R)C In(3R)K In(3R)Mo In(3R)P Infection Status Inversion Status (yes/no) | Resistance Metabolism | Under curation |
2018-08-31 | romain.rochepeau | |
| Ørsted et al., 2017 Environmental variation partitioned into separate heritable components [10.1111/evo.13391][FBrf0237717] |
CTmin 23C Mean CTmin 23C SE Inversion_2L_t Inversion_2R_NS Inversion_3R_K Inversion_3R_Mo Inversion_3R_P V.AE Mean V.AE SE V.WE Mean V.WE SE V.plast Mean V.plast SE V.v.plast Mean V.v.plast SE WolbachiaStatus grp | Resistance Genome architecture | Under curation |
2017-12-31 | romain.rochepeau | |
| Lafuente et al., 2018 Genetic basis of thermal plasticity variation in Drosophila melanogasterbody size [10.1101/268201] |
Body part Length (mm) Temperature | Appearance | Under curation |
2018-03-06 | romain.rochepeau | |
| Patel et al., 2021 Identification of genetic modifiers of lifespan on a high sugar diet in the Drosophila Genetic Reference Panel [10.1016/j.heliyon.2021.e07153][FBrf0249297] |
Average Lifespan | Life history traits | Under curation |
2021-05-31 | romain.rochepeau | |
| Arya et al., 2015 The Genetic Basis for Variation in Olfactory Behavior in Drosophila melanogaster [10.1093/chemse/bjv001][FBrf0228128] |
mn_Resp_1_Acetophen mn_Resp_1_Hexanol mn_Resp_2_Heptanone mn_Resp_2_PhenylEthy mn_Resp_Benzaldehyde mn_Resp_Citral mn_Resp_EthylAcetate mn_Resp_EthylButyrat mn_Resp_Eugenol mn_Resp_Helional mn_Resp_Hexanal mn_Resp_I_Carvone mn_Resp_MethylSalicy mn_Resp_d_Carvone | Olfactory Sensory Behaviour | Curated |
2015-04-30 | Roel Bevers | |
| Evangelou et al., 2018 Unpredictable effects of the genetic background of transgenic lines in physiological quantitative traits [10.1101/494419] |
Branching_O2_5pc Fecal_PH_PAeruginosa Fecundity Survival_Paeruginosa midgut_mitosis_PA pc_Defecation_Paerug | Metabolism Life history traits | Under curation |
2018-12-12 | romain.rochepeau | |
| Huang et al., 2020 Context-dependent genetic architecture of Drosophila life span [10.1371/journal.pbio.3000645][FBrf0245198] |
Lifespan_18C Lifespan_25C Lifespan_28C sd_Lifespan_Env_18 sd_Lifespan_Env_25 sd_Lifespan_Env_28 | Ageing Life history traits Evolution | Curated |
2020-03-04 | Roel Bevers | |
| Rohde et al., 2018 Functional Validation of Candidate Genes Detected by Genomic Feature Models [10.1534/g3.118.200082][FBrf0238818] |
Mean | Behaviour | Under curation |
2018-04-30 | romain.rochepeau | |
| Montgomery et al., 2014 Genome-Wide Association Analysis of Tolerance to Methylmercury Toxicity in Drosophila Implicates Myogenic and Neuromuscular Developmental Pathways [10.1371/journal.pone.0110375][FBrf0226648] |
idx_Surv_10MeHg idx_Surv_10MeHg_CAFF idx_Surv_15MeHg idx_Surv_5MeHg idx_Surv_cum_MeHg pc_Surv_MeHg_0 pc_Surv_MeHg_0_CAFF pc_Surv_MeHg_10 pc_Surv_MeHg_10_CAFF pc_Surv_MeHg_15 pc_Surv_MeHg_5 | Fecundity Resistance Toxicity | Curated |
2014-10-30 | Roel Bevers | |
| Ivanov et al., 2015 Longevity GWAS Using the Drosophila Genetic Reference Panel [10.1093/gerona/glv047][FBrf0230043] |
WolbachiaStatus md_Lifespan mn_Lifespan sd_Lifespan | Ageing | Curated |
2015-11-30 | Roel Bevers | |
| Rohde et al., 2019 Genetic Signatures of Drug Response Variability in Drosophila melanogaster [10.1534/genetics.119.302381][FBrf0243724] |
Food_Intake_MPH Food_Intake_SUC Locomot_Activity_MPH Locomot_Activity_SUC | Locomotion Behaviour | Curated |
2019-09-30 | romain.rochepeau | |
| Vonesch et al., 2016 Genome-Wide Analysis Reveals Novel Regulators of Growth in Drosophila melanogaster [10.1371/journal.pgen.1005616][FBrf0230608] |
Eye_Area Eye_Interocular_Dist Head_Width Shoulder_Width Thorax_Length Wing_ACV_Length Wing_Anterior_to_L2 Wing_Area Wing_CentroidSize Wing_Intervein_Area1 Wing_Intervein_Area2 Wing_Intervein_Area3 Wing_Intervein_Area4 Wing_Intervein_Area5 Wing_Intervein_Area6 Wing_Intervein_Area7 Wing_Intervein_Area8 Wing_L1_Vein_Length Wing_L2_Vein_Length Wing_L3_Vein_Length Wing_L4_Vein_Length Wing_L5_Vein_Length Wing_L6_Vein_Length Wing_Length Wing_PCV_Length Wing_Posterior_to_L5 Wing_Width | Anatomy Appearance Organ Size | Curated |
2016-01-10 | Roel Bevers | |
| Lovejoy et al., 2021 Genetic basis of susceptibility to low‐dose paraquat and variation between the sexes in Drosophila melanogaster [10.1111/mec.15878][FBrf0248852] |
Allele_11072708 Allele_11080173 Allele_11081287 Allele_13581579 Allele_13581582 Allele_13581589 Allele_13761853 Allele_13781355 Allele_14049489 Allele_14049491 Allele_14049501 Allele_3903304 Allele_4648968 Allele_9015205 Block BlockLetter CG14380_CT CG42404_CT Climbing_Control Climbing_PQ ControlDA DAControl DADifference DAParaquat FBS FC FP HSC70_4_CT HeightClimbed HscC HscP IscUC IscUP IscU_CT MBS MC MP ParaquatDA Paraquat_Climbing RPL32C RPL32P RPL32_CT Resistance Sc2C Sc2P Sc2_CT Susceptibility_C_PQ Susceptible Treatment_C Treatment_Control TyrRC TyrRP TyrR_CT Unnamed_0 Vial cg14380C cg14380P cg42404C cg42404P cpoC cpoP cpo_CT nAcRalpha_34E_CT nachrC nachrP | Sensory Behaviour | Under curation |
2021-04-30 | romain.rochepeau | |
| Katzenberger et al., 2015 Death following traumatic brain injury in Drosophila is associated with intestinal barrier dysfunction [10.7554/eLife.04790][FBrf0227948] |
mn_MortalityInd sd_MortalityInd | Resistance Life history traits | Curated |
2015-03-04 | Roel Bevers | |
| Najarro et al., 2015 Identifying Loci Contributing to Natural Variation in Xenobiotic Resistance in Drosophila [10.1371/journal.pgen.1005663][FBrf0230275] |
Lifespan_Caffeine | Resistance Toxicity | Curated |
2015-11-29 | Roel Bevers | |
| Rodrigues et al., 2022 The genetic basis and adult reproductive consequences of developmental thermal plasticity [10.1111/1365-2656.13664][FBrf0253732] |
Larvae Line_Status Mating Temperature Vial daughters1 daughters2 daughters3 daughtersTotal productivity1 productivity2 productivity3 productivityTotal pupae3 sons1 sons2 sons3 sonsTotal | Life history traits | Under curation |
2022-05-31 | romain.rochepeau | |
| Bonfini et al., 2021 Multiscale analysis reveals that diet-dependent midgut plasticity emerges from alterations in both stem cell niche coupling and enterocyte size [10.7554/elife.64125] |
Gut_Number additional_code alias anteriorLength anteriorwidth block code diet image middleLength posteriorLength posteriorwidth totalLength | Development Organ Size Metabolism | Under curation |
2021-09-22 | romain.rochepeau | |
| Huang et al., 2014 Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines [10.1101/gr.171546.113][FBrf0225536] |
Inversion_2L_t Inversion_2R_NS Inversion_2R_Y1 Inversion_2R_Y2 Inversion_2R_Y3 Inversion_2R_Y4 Inversion_2R_Y5 Inversion_2R_Y6 Inversion_2R_Y7 Inversion_3L_M Inversion_3L_P Inversion_3L_Y Inversion_3R_C Inversion_3R_K Inversion_3R_Mo Inversion_3R_P SegregVariants_2L SegregVariants_2R SegregVariants_3L SegregVariants_3R SegregVariants_X TotalVariants_2L TotalVariants_2R TotalVariants_3L TotalVariants_3R TotalVariants_X WolbachiaStatus mn_GenomeSize pc_SegregVariants_2L pc_SegregVariants_2R pc_SegregVariants_3L pc_SegregVariants_3R pc_SegregVariants_X se_GenomeSize | Genome architecture Microbiota | Curated |
2014-06-30 | Roel Bevers |