Study

Curated
Ivanov et al., 2015
Longevity GWAS Using the Drosophila Genetic Reference Panel
[10.1093/gerona/glv047][FBrf0230043]

Description

This study measured the lifespan of virgin females. Genes in the target of the rapamycin pathway or carbohydrate metabolism seem to be associated with lifespan; including the InterPro term DUF227, which has been previously associated with lifespan determination.

Comments from curator

Data were extracted from the Supplementary Table 1 in the Supplementary data section.

Of note, part of the lifespan data is coming from another study: (Arya et al, 2010)

The Wolbachia infection status is a binary value, compatible with PLINK, i.e. values can be 1 (not infected) or 2 (infected). This phenotype was actually taken from another study: (Huang et al, 2014)

197 DGRP lines 185 available 12 genotyped

DGRP_021 DGRP_026 DGRP_028 DGRP_031 DGRP_032 DGRP_038 DGRP_040 DGRP_041 DGRP_042 DGRP_045 DGRP_048 DGRP_049 DGRP_057 DGRP_059 DGRP_069 DGRP_073 DGRP_075 DGRP_083 DGRP_085 DGRP_088 DGRP_091 DGRP_093 DGRP_100 DGRP_101 DGRP_105 DGRP_109 DGRP_129 DGRP_136 DGRP_138 DGRP_142 DGRP_149 DGRP_153 DGRP_158 DGRP_161 DGRP_176 DGRP_177 DGRP_181 DGRP_189 DGRP_195 DGRP_208 DGRP_217 DGRP_223 DGRP_227 DGRP_228 DGRP_229 DGRP_233 DGRP_235 DGRP_237 DGRP_239 DGRP_256 DGRP_280 DGRP_287 DGRP_303 DGRP_306 DGRP_307 DGRP_309 DGRP_310 DGRP_313 DGRP_315 DGRP_317 DGRP_318 DGRP_320 DGRP_321 DGRP_324 DGRP_325 DGRP_332 DGRP_335 DGRP_338 DGRP_340 DGRP_348 DGRP_350 DGRP_352 DGRP_354 DGRP_355 DGRP_356 DGRP_357 DGRP_358 DGRP_359 DGRP_360 DGRP_362 DGRP_365 DGRP_367 DGRP_370 DGRP_371 DGRP_373 DGRP_374 DGRP_375 DGRP_377 DGRP_379 DGRP_380 DGRP_381 DGRP_382 DGRP_383 DGRP_385 DGRP_386 DGRP_391 DGRP_392 DGRP_395 DGRP_399 DGRP_405 DGRP_406 DGRP_409 DGRP_426 DGRP_427 DGRP_437 DGRP_439 DGRP_440 DGRP_441 DGRP_443 DGRP_461 DGRP_486 DGRP_491 DGRP_492 DGRP_502 DGRP_505 DGRP_508 DGRP_509 DGRP_513 DGRP_517 DGRP_528 DGRP_530 DGRP_531 DGRP_535 DGRP_551 DGRP_555 DGRP_559 DGRP_563 DGRP_566 DGRP_584 DGRP_589 DGRP_595 DGRP_596 DGRP_627 DGRP_630 DGRP_634 DGRP_639 DGRP_642 DGRP_646 DGRP_703 DGRP_705 DGRP_707 DGRP_712 DGRP_714 DGRP_716 DGRP_721 DGRP_727 DGRP_730 DGRP_732 DGRP_737 DGRP_738 DGRP_748 DGRP_757 DGRP_761 DGRP_765 DGRP_774 DGRP_776 DGRP_783 DGRP_786 DGRP_787 DGRP_790 DGRP_796 DGRP_799 DGRP_801 DGRP_802 DGRP_804 DGRP_805 DGRP_808 DGRP_810 DGRP_812 DGRP_818 DGRP_819 DGRP_820 DGRP_821 DGRP_822 DGRP_837 DGRP_843 DGRP_849 DGRP_850 DGRP_852 DGRP_853 DGRP_855 DGRP_857 DGRP_859 DGRP_861 DGRP_879 DGRP_882 DGRP_884 DGRP_887 DGRP_890 DGRP_892 DGRP_894 DGRP_897 DGRP_900 DGRP_907 DGRP_908 DGRP_911 DGRP_913

Datasets

Dataset Phenotypes DGRP lines
Summary dataset 5 phenotypes
WolbachiaStatus md_Lifespan mn_Lifespan sd_Lifespan
197 DGRP lines
DGRP_049
DGRP_158
DGRP_223
DGRP_233
DGRP_237
DGRP_325
DGRP_367
DGRP_530
DGRP_642
DGRP_727
DGRP_887
DGRP_894
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