DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=3.392e^-2)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2279 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2L	16326537	2L_16326537_SNP [dm3] 2L_16326537_SNP [dm6]	A	G	4.420e^-7	0.406	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	14912734	2L_14912734_SNP [dm3] 2L_14912734_SNP [dm6]	T	C	6.970e^-7	0.406	INTRON CG42313
2L	14912715	2L_14912715_INS [dm3] 2L_14912715_INS [dm6]	A	ACTTTTGA	7.665e^-7	0.406	INTRON CG42313
2L	14912738	2L_14912738_DEL [dm3] 2L_14912738_DEL [dm6]	AA	A	8.734e^-7	0.406	INTRON CG42313
2L	14915358	2L_14915358_SNP [dm3] 2L_14915358_SNP [dm6]	C	A	1.226e^-6	0.406	INTRON CG42313
3L	16879529	3L_16879529_SNP [dm3] 3L_16886429_SNP [dm6]	A	T	1.300e^-6	0.406	UPSTREAM Lmpt INTRON Lmpt
3L	3870760	3L_3870760_SNP [dm3] 3L_3870760_SNP [dm6]	T	C	1.767e^-6	0.473	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	16325796	2L_16325796_SNP [dm3] 2L_16325796_SNP [dm6]	C	A	2.159e^-6	0.506	UPSTREAM cact INTRON cact	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	14830401	3R_14830401_SNP [dm3] 3R_19004679_SNP [dm6]	G	C	2.794e^-6	0.582	INTRON gukh	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2R	11876525	2R_11876525_SNP [dm3] 2R_15989020_SNP [dm6]	C	T	4.029e^-6	0.641	UTR_5_PRIME Strn-Mlck DOWNSTREAM CR45021 & 1 other
3L	15633363	3L_15633363_SNP [dm3] 3L_15640263_SNP [dm6]	G	A	4.449e^-6	0.641	INTRON comm3	TF binding site mE1_TFBS_inv
2R	6058520	2R_6058520_SNP [dm3] 2R_10171015_SNP [dm6]	C	T	4.606e^-6	0.641	INTRON KCNQ
3R	13000134	3R_13000134_SNP [dm3] 3R_17174412_SNP [dm6]	T	A	4.745e^-6	0.641	INTRON Mur89F
3R	13000140	3R_13000140_DEL [dm3] 3R_17174418_DEL [dm6]	GG	G	4.791e^-6	0.641	INTRON Mur89F
3R	17796336	3R_17796336_SNP [dm3] 3R_21970614_SNP [dm6]	G	T	5.143e^-6	0.643	INTRON Eip93F	TF binding site BDTNP1_TFBS_z
3L	19647436	3L_19647436_SNP [dm3] 3L_19654336_SNP [dm6]	G	T	6.366e^-6	0.654	INTRON tey
2L	16326158	2L_16326158_SNP [dm3] 2L_16326158_SNP [dm6]	A	G	6.378e^-6	0.654	UTR_5_PRIME cact UPSTREAM cact & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	9816259	2R_9816259_SNP [dm3] 2R_13928754_SNP [dm6]	T	A	6.461e^-6	0.654	INTRON shot
3R	15462935	3R_15462935_SNP [dm3] 3R_19637213_SNP [dm6]	G	A	7.393e^-6	0.654	SYNONYMOUS_CODING subdued
2L	16325829	2L_16325829_SNP [dm3] 2L_16325829_SNP [dm6]	C	T	7.736e^-6	0.654	UPSTREAM cact INTRON cact	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	10324392	2R_10324392_SNP [dm3] 2R_14436887_SNP [dm6]	G	T	7.826e^-6	0.654	INTRON Oaz	TF binding site mE1_TFBS_HSA
2L	16326443	2L_16326443_SNP [dm3] 2L_16326443_SNP [dm6]	A	G	7.836e^-6	0.654	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	16326832	2L_16326832_SNP [dm3] 2L_16326832_SNP [dm6]	T	A	8.970e^-6	0.654	UPSTREAM CG4278 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	16326950	2L_16326950_SNP [dm3] 2L_16326950_SNP [dm6]	C	G	9.830e^-6	0.654	UPSTREAM CG4278 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	16326903	2L_16326903_SNP [dm3] 2L_16326903_SNP [dm6]	T	G	1.061e^-5	0.654	UPSTREAM CG4278 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	6177225	2R_6177225_SNP [dm3] 2R_10289720_SNP [dm6]	G	C	1.145e^-5	0.654	INTRON CAP
3L	3870748	3L_3870748_SNP [dm3] 3L_3870748_SNP [dm6]	A	G	1.197e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	20437820	3L_20437820_SNP [dm3] 3L_20444720_SNP [dm6]	C	T	1.214e^-5	0.654	UPSTREAM CG5910 INTRON CG5910
2R	10205940	2R_10205940_SNP [dm3] 2R_14318435_SNP [dm6]	C	T	1.224e^-5	0.654	INTRON Shroom
2L	16326169	2L_16326169_SNP [dm3] 2L_16326169_SNP [dm6]	C	T	1.245e^-5	0.654	UTR_5_PRIME cact UPSTREAM cact & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	12584713	2R_12584713_SNP [dm3] 2R_16697208_SNP [dm6]	G	A	1.328e^-5	0.654	INTRON CG30463
2L	6197565	2L_6197565_SNP [dm3] 2L_6197565_SNP [dm6]	C	T	1.406e^-5	0.654	INTRON CG34380	TF binding site BDTNP1_TFBS_twi
3L	4084128	3L_4084128_SNP [dm3] 3L_4084128_SNP [dm6]	A	G	1.407e^-5	0.654	INTRON Gad1
3R	23057296	3R_23057296_DEL [dm3] 3R_27231574_DEL [dm6]	CA	C	1.411e^-5	0.654	UTR_3_PRIME CG31064 INTRON CG31064
2L	7529168	2L_7529168_SNP [dm3] 2L_7529168_SNP [dm6]	C	A	1.451e^-5	0.654	INTRON RapGAP1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_zfh1
2L	16326616	2L_16326616_INS [dm3] 2L_16326616_INS [dm6]	T	TAGGGGTTT	1.457e^-5	0.654	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2L	16324092	2L_16324092_SNP [dm3] 2L_16324092_SNP [dm6]	C	G	1.466e^-5	0.654	INTRON cact	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	1942366	2L_1942366_SNP [dm3] 2L_1942366_SNP [dm6]	G	A	1.472e^-5	0.654	SYNONYMOUS_CODING CG7337
3R	10605544	3R_10605544_SNP [dm3] 3R_14779822_SNP [dm6]	A	G	1.492e^-5	0.654	INTRON jvl
2L	16326197	2L_16326197_SNP [dm3] 2L_16326197_SNP [dm6]	C	A	1.539e^-5	0.654	UTR_5_PRIME cact UPSTREAM cact & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	16325461	2L_16325461_SNP [dm3] 2L_16325461_SNP [dm6]	C	A	1.615e^-5	0.654	UPSTREAM cact INTRON cact	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	10205961	2R_10205961_SNP [dm3] 2R_14318456_SNP [dm6]	G	A	1.643e^-5	0.654	INTRON Shroom
2L	16326156	2L_16326156_SNP [dm3] 2L_16326156_SNP [dm6]	G	A	1.684e^-5	0.654	UTR_5_PRIME cact UPSTREAM cact & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	4715470	2L_4715470_DEL [dm3] 2L_4715470_DEL [dm6]	TAT	T	1.711e^-5	0.654	INTRON CG34351
2L	7529190	2L_7529190_SNP [dm3] 2L_7529190_SNP [dm6]	T	G	1.839e^-5	0.654	INTRON RapGAP1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_zfh1
2R	19305454	2R_19305454_SNP [dm3] 2R_23417931_SNP [dm6]	G	A	1.887e^-5	0.654	DOWNSTREAM CG30411 INTRON CG9812
2L	16326619	2L_16326619_SNP [dm3] 2L_16326619_SNP [dm6]	T	G	1.897e^-5	0.654	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	16596717	2L_16596717_SNP [dm3] 2L_16596717_SNP [dm6]	T	G	1.901e^-5	0.654	INTRON CG42389
3R	17026179	3R_17026179_SNP [dm3] 3R_21200457_SNP [dm6]	A	T	1.966e^-5	0.654	INTRON SNF4Agamma	TF binding site mE1_TFBS_cad mE1_TFBS_Trl
3R	10605618	3R_10605618_SNP [dm3] 3R_14779896_SNP [dm6]	C	A	2.061e^-5	0.654	INTRON jvl
2R	20141475	2R_20141475_SNP [dm3] 2R_24253952_SNP [dm6]	G	A	2.065e^-5	0.654	NON_SYNONYMOUS_CODING nord	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	3022275	3L_3022275_SNP [dm3] 3L_3022275_SNP [dm6]	T	A	2.066e^-5	0.654	INTERGENIC
3R	17025786	3R_17025786_SNP [dm3] 3R_21200064_SNP [dm6]	T	G	2.093e^-5	0.654	UPSTREAM SNF4Agamma INTRON SNF4Agamma
3L	20309767	3L_20309767_SNP [dm3] 3L_20316667_SNP [dm6]	T	A	2.144e^-5	0.654	UPSTREAM Spn77Ba DOWNSTREAM alphaSnap INTRON CR43875
3L	5284725	3L_5284725_SNP [dm3] 3L_5291625_SNP [dm6]	C	G	2.214e^-5	0.654	INTERGENIC	TF binding site mE1_TFBS_inv
X	11407791	X_11407791_SNP [dm3] X_11513758_SNP [dm6]	A	G	2.223e^-5	0.654	INTRON Drak
3R	10054000	3R_10054000_SNP [dm3] 3R_14228278_SNP [dm6]	T	C	2.228e^-5	0.654	SYNONYMOUS_CODING CG9624
2R	1735455	2R_1735455_SNP [dm3] 2R_5847950_SNP [dm6]	A	T	2.307e^-5	0.654	INTRON dpr12	TF binding site mE1_TFBS_chinmo
3R	7757809	3R_7757809_SNP [dm3] 3R_11932087_SNP [dm6]	G	T	2.307e^-5	0.654	INTRON Cad87A & 1 other
3R	17025482	3R_17025482_SNP [dm3] 3R_21199760_SNP [dm6]	T	G	2.313e^-5	0.654	UTR_5_PRIME SNF4Agamma UPSTREAM SNF4Agamma INTRON SNF4Agamma	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	1936698	2L_1936698_SNP [dm3] 2L_1936698_SNP [dm6]	A	G	2.337e^-5	0.654	SYNONYMOUS_CODING CG7337	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	16326874	2L_16326874_SNP [dm3] 2L_16326874_SNP [dm6]	C	G	2.427e^-5	0.654	UPSTREAM CG4278 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	17025744	3R_17025744_SNP [dm3] 3R_21200022_SNP [dm6]	T	A	2.459e^-5	0.654	UPSTREAM SNF4Agamma INTRON SNF4Agamma
2L	8910753	2L_8910753_SNP [dm3] 2L_8910753_SNP [dm6]	C	T	2.509e^-5	0.654	INTRON CG34398
2L	16326097	2L_16326097_SNP [dm3] 2L_16326097_SNP [dm6]	C	T	2.526e^-5	0.654	UTR_5_PRIME cact UPSTREAM cact & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	10605598	3R_10605598_SNP [dm3] 3R_14779876_SNP [dm6]	T	C	2.548e^-5	0.654	INTRON jvl
X	12041668	X_12041668_SNP [dm3] X_12147635_SNP [dm6]	C	T	2.660e^-5	0.654	INTRON Ten-a
3L	3577953	3L_3577953_SNP [dm3] 3L_3577953_SNP [dm6]	G	C	2.699e^-5	0.654	INTRON Eip63E
2L	4040895	2L_4040895_SNP [dm3] 2L_4040895_SNP [dm6]	A	G	2.714e^-5	0.654	INTRON ed
3R	11264187	3R_11264187_MNP [dm3] 3R_15438465_MNP [dm6]	AGT	GTA	2.750e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	11264181	3R_11264181_SNP [dm3] 3R_15438459_SNP [dm6]	A	G	2.799e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	10605605	3R_10605605_SNP [dm3] 3R_14779883_SNP [dm6]	C	G	2.884e^-5	0.654	INTRON jvl
2R	7039634	2R_7039634_SNP [dm3] 2R_11152129_SNP [dm6]	G	A	2.931e^-5	0.654	INTRON CG13229
2R	7039638	2R_7039638_SNP [dm3] 2R_11152133_SNP [dm6]	T	G	2.931e^-5	0.654	INTRON CG13229
3L	10271533	3L_10271533_SNP [dm3] 3L_10278433_SNP [dm6]	C	T	2.931e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2L	8910670	2L_8910670_SNP [dm3] 2L_8910670_SNP [dm6]	T	C	2.963e^-5	0.654	INTRON CG34398
3R	11264174	3R_11264174_SNP [dm3] 3R_15438452_SNP [dm6]	A	T	2.966e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	11264175	3R_11264175_SNP [dm3] 3R_15438453_SNP [dm6]	G	T	2.966e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	11264177	3R_11264177_SNP [dm3] 3R_15438455_SNP [dm6]	G	A	2.966e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	23057252	3R_23057252_INS [dm3] 3R_27231530_INS [dm6]	T	TCATGTT	2.996e^-5	0.654	UTR_3_PRIME CG31064 INTRON CG31064
3R	23057254	3R_23057254_DEL [dm3] 3R_27231532_DEL [dm6]	CAGATTA	C	2.996e^-5	0.654	UTR_3_PRIME CG31064 INTRON CG31064
3L	3870779	3L_3870779_SNP [dm3] 3L_3870779_SNP [dm6]	T	C	3.043e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	1413069	3L_1413069_SNP [dm3] 3L_1413069_SNP [dm6]	A	T	3.078e^-5	0.654	NON_SYNONYMOUS_CODING CG9168 INTRON Ptp61F
2R	10331982	2R_10331982_SNP [dm3] 2R_14444477_SNP [dm6]	G	A	3.083e^-5	0.654	INTRON Oaz	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
2R	17964424	2R_17964424_SNP [dm3] 2R_22076919_SNP [dm6]	C	T	3.142e^-5	0.654	SYNONYMOUS_CODING GlcT-1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	18989607	3R_18989607_SNP [dm3] 3R_23163885_SNP [dm6]	T	A	3.145e^-5	0.654	INTERGENIC
2R	9816196	2R_9816196_SNP [dm3] 2R_13928691_SNP [dm6]	A	G	3.151e^-5	0.654	INTRON shot
2L	20693856	2L_20693856_SNP [dm3] 2L_20693856_SNP [dm6]	G	A	3.227e^-5	0.654	INTRON Hr38
3L	11402066	3L_11402066_SNP [dm3] 3L_11408966_SNP [dm6]	C	G	3.332e^-5	0.654	INTERGENIC
2L	16324441	2L_16324441_SNP [dm3] 2L_16324441_SNP [dm6]	G	C	3.348e^-5	0.654	NON_SYNONYMOUS_CODING cact	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	15634259	2L_15634259_SNP [dm3] 2L_15634259_SNP [dm6]	T	C	3.371e^-5	0.654	UTR_3_PRIME CG18480
2R	9823699	2R_9823699_SNP [dm3] 2R_13936194_SNP [dm6]	G	T	3.535e^-5	0.654	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
X	9777218	X_9777218_SNP [dm3] X_9883185_SNP [dm6]	G	T	3.597e^-5	0.654	UTR_3_PRIME CG9689 DOWNSTREAM CG9689	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3L	20452700	3L_20452700_SNP [dm3] 3L_20459600_SNP [dm6]	T	C	3.615e^-5	0.654	UTR_5_PRIME CG5195
2L	15768457	2L_15768457_SNP [dm3] 2L_15768457_SNP [dm6]	T	A	3.637e^-5	0.654	UPSTREAM wek DOWNSTREAM Ku80 INTERGENIC	TF binding site BDTNP1_TFBS_Med
3L	11402148	3L_11402148_SNP [dm3] 3L_11409048_SNP [dm6]	T	A	3.722e^-5	0.654	INTERGENIC
2L	16328501	2L_16328501_SNP [dm3] 2L_16328501_SNP [dm6]	A	C	3.783e^-5	0.654	NON_SYNONYMOUS_CODING mRpL4 DOWNSTREAM CG4278	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	16326403	2L_16326403_SNP [dm3] 2L_16326403_SNP [dm6]	A	C	3.787e^-5	0.654	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	11264182	3R_11264182_SNP [dm3] 3R_15438460_SNP [dm6]	G	A	3.793e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	10789851	2L_10789851_SNP [dm3] 2L_10789851_SNP [dm6]	A	T	3.862e^-5	0.654	UPSTREAM CG31870 INTRON CG31869
3R	25131738	3R_25131738_DEL [dm3] 3R_29306016_DEL [dm6]	GCAA	G	3.863e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2R	10912314	2R_10912314_SNP [dm3] 2R_15024809_SNP [dm6]	A	T	3.958e^-5	0.654	NON_SYNONYMOUS_CODING Obp51a UPSTREAM CR45256 INTRON hbs	TF binding site BDTNP1_TFBS_dl
3L	7746810	3L_7746810_SNP [dm3] 3L_7753710_SNP [dm6]	G	T	3.991e^-5	0.654	UPSTREAM CG7409 INTRON CG32373
3L	11047427	3L_11047427_SNP [dm3] 3L_11054327_SNP [dm6]	A	T	3.994e^-5	0.654	UTR_5_PRIME CG7888
3L	12659158	3L_12659158_SNP [dm3] 3L_12666058_SNP [dm6]	A	T	4.011e^-5	0.654	INTERGENIC
3R	16839917	3R_16839917_SNP [dm3] 3R_21014195_SNP [dm6]	G	C	4.028e^-5	0.654	UTR_3_PRIME Calx DOWNSTREAM Calx
2R	10870153	2R_10870153_SNP [dm3] 2R_14982648_SNP [dm6]	C	T	4.062e^-5	0.654	INTRON pcs	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	11402135	3L_11402135_SNP [dm3] 3L_11409035_SNP [dm6]	T	A	4.252e^-5	0.654	INTERGENIC
2L	8910752	2L_8910752_SNP [dm3] 2L_8910752_SNP [dm6]	C	T	4.284e^-5	0.654	INTRON CG34398
3L	11402132	3L_11402132_SNP [dm3] 3L_11409032_SNP [dm6]	A	C	4.310e^-5	0.654	INTERGENIC
3R	11264125	3R_11264125_INS [dm3] 3R_15438403_INS [dm6]	A	AT	4.313e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	11264127	3R_11264127_SNP [dm3] 3R_15438405_SNP [dm6]	T	A	4.313e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	11402078	3L_11402078_INS [dm3] 3L_11408978_INS [dm6]	T	TA	4.385e^-5	0.654	INTERGENIC
3L	11402091	3L_11402091_SNP [dm3] 3L_11408991_SNP [dm6]	T	A	4.385e^-5	0.654	INTERGENIC
3L	11402097	3L_11402097_SNP [dm3] 3L_11408997_SNP [dm6]	C	A	4.385e^-5	0.654	INTERGENIC
3L	11402142	3L_11402142_INS [dm3] 3L_11409042_INS [dm6]	T	TG	4.385e^-5	0.654	INTERGENIC
3L	11402160	3L_11402160_SNP [dm3] 3L_11409060_SNP [dm6]	T	C	4.385e^-5	0.654	INTERGENIC
X	5470052	X_5470052_SNP [dm3] X_5576019_SNP [dm6]	C	T	4.410e^-5	0.654	INTERGENIC
2R	10324528	2R_10324528_SNP [dm3] 2R_14437023_SNP [dm6]	T	C	4.412e^-5	0.654	INTRON Oaz	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	11264161	3R_11264161_SNP [dm3] 3R_15438439_SNP [dm6]	G	A	4.437e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2R	10413626	2R_10413626_SNP [dm3] 2R_14526121_SNP [dm6]	T	A	4.447e^-5	0.654	UPSTREAM ttv INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2L	8910745	2L_8910745_SNP [dm3] 2L_8910745_SNP [dm6]	G	A	4.483e^-5	0.654	INTRON CG34398
2L	20874246	2L_20874246_SNP [dm3] 2L_20874246_SNP [dm6]	C	G	4.491e^-5	0.654	INTRON sky & 1 other EXON CR44981	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	11264160	3R_11264160_SNP [dm3] 3R_15438438_SNP [dm6]	A	T	4.634e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	16572054	2L_16572054_SNP [dm3] 2L_16572054_SNP [dm6]	G	A	4.676e^-5	0.654	INTRON CG42389
3R	7718298	3R_7718298_SNP [dm3] 3R_11892576_SNP [dm6]	G	A	4.688e^-5	0.654	SYNONYMOUS_CODING CG6971 DOWNSTREAM CG31368 & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	18016866	3R_18016866_SNP [dm3] 3R_22191144_SNP [dm6]	G	T	4.694e^-5	0.654	INTRON SKIP
3R	25131745	3R_25131745_SNP [dm3] 3R_29306023_SNP [dm6]	A	G	4.703e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	8910301	2L_8910301_SNP [dm3] 2L_8910301_SNP [dm6]	T	A	4.708e^-5	0.654	INTRON CG34398
2R	9997574	2R_9997574_SNP [dm3] 2R_14110069_SNP [dm6]	C	G	4.735e^-5	0.654	INTRON Prosap
2R	12584719	2R_12584719_SNP [dm3] 2R_16697214_SNP [dm6]	A	T	4.750e^-5	0.654	INTRON CG30463
3R	17680456	3R_17680456_SNP [dm3] 3R_21854734_SNP [dm6]	T	C	4.772e^-5	0.654	INTRON glec	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_Trl
3L	11402134	3L_11402134_SNP [dm3] 3L_11409034_SNP [dm6]	T	C	4.816e^-5	0.654	INTERGENIC
2L	15634250	2L_15634250_SNP [dm3] 2L_15634250_SNP [dm6]	T	A	4.882e^-5	0.654	UTR_3_PRIME CG18480
2L	19224689	2L_19224689_SNP [dm3] 2L_19224689_SNP [dm6]	A	G	4.890e^-5	0.654	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	1413070	3L_1413070_SNP [dm3] 3L_1413070_SNP [dm6]	T	A	4.933e^-5	0.654	NON_SYNONYMOUS_CODING CG9168 INTRON Ptp61F
3R	11264168	3R_11264168_SNP [dm3] 3R_15438446_SNP [dm6]	A	T	4.972e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	3870740	3L_3870740_SNP [dm3] 3L_3870740_SNP [dm6]	T	C	4.977e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	17747948	2R_17747948_INS [dm3] 2R_21860443_INS [dm6]	C	CC	4.985e^-5	0.654	UPSTREAM CG9294 INTERGENIC
3R	10605555	3R_10605555_SNP [dm3] 3R_14779833_SNP [dm6]	T	A	5.007e^-5	0.654	INTRON jvl
2R	14897058	2R_14897058_SNP [dm3] 2R_19009553_SNP [dm6]	T	A	5.012e^-5	0.654	DOWNSTREAM tn INTERGENIC
2R	9797171	2R_9797171_SNP [dm3] 2R_13909666_SNP [dm6]	G	A	5.037e^-5	0.654	INTRON shot
3L	7283299	3L_7283299_SNP [dm3] 3L_7290199_SNP [dm6]	C	A	5.141e^-5	0.654	INTRON unc-13-4A
2L	2011700	2L_2011700_SNP [dm3] 2L_2011700_SNP [dm6]	C	T	5.148e^-5	0.654	UPSTREAM CG4238 & 2 others INTRON CG4238
2R	9724738	2R_9724738_SNP [dm3] 2R_13837233_SNP [dm6]	C	T	5.166e^-5	0.654	INTRON CG6347
3L	18198873	3L_18198873_SNP [dm3] 3L_18205773_SNP [dm6]	T	C	5.191e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_inv
2L	16326625	2L_16326625_DEL [dm3] 2L_16326625_DEL [dm6]	CC	C	5.205e^-5	0.654	UPSTREAM CG4278 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3R	11264171	3R_11264171_SNP [dm3] 3R_15438449_SNP [dm6]	A	C	5.311e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
X	8006958	X_8006958_SNP [dm3] X_8112925_SNP [dm6]	C	T	5.322e^-5	0.654	INTRON Gclc
3R	19091144	3R_19091144_SNP [dm3] 3R_23265422_SNP [dm6]	T	C	5.464e^-5	0.654	UTR_3_PRIME orb DOWNSTREAM orb
3R	17790811	3R_17790811_SNP [dm3] 3R_21965089_SNP [dm6]	T	G	5.583e^-5	0.654	INTRON Eip93F
2L	18742238	2L_18742238_SNP [dm3] 2L_18742238_SNP [dm6]	A	T	5.607e^-5	0.654	INTERGENIC
2L	16596984	2L_16596984_DEL [dm3] 2L_16596984_DEL [dm6]	AAG	A	5.618e^-5	0.654	INTRON CG42389	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16596995	2L_16596995_INS [dm3] 2L_16596995_INS [dm6]	TG	AATCAA	5.618e^-5	0.654	INTRON CG42389	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	11264134	3R_11264134_INS [dm3] 3R_15438412_INS [dm6]	A	ATA	5.619e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	11047732	3L_11047732_SNP [dm3] 3L_11054632_SNP [dm6]	T	G	5.628e^-5	0.654	UPSTREAM CG7888 INTRON CG7888
3L	7195449	3L_7195449_SNP [dm3] 3L_7202349_SNP [dm6]	G	A	5.630e^-5	0.654	INTERGENIC
X	3191308	X_3191308_SNP [dm3] X_3297275_SNP [dm6]	C	A	5.640e^-5	0.654	INTRON dnc
3R	7718075	3R_7718075_SNP [dm3] 3R_11892353_SNP [dm6]	T	G	5.670e^-5	0.654	UTR_3_PRIME CG31368 & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	26135068	3R_26135068_SNP [dm3] 3R_30309346_SNP [dm6]	C	A	5.703e^-5	0.654	INTRON hdc	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26135069	3R_26135069_SNP [dm3] 3R_30309347_SNP [dm6]	T	C	5.703e^-5	0.654	INTRON hdc	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	18016868	3R_18016868_SNP [dm3] 3R_22191146_SNP [dm6]	A	G	5.744e^-5	0.654	INTRON SKIP
3R	11264140	3R_11264140_INS [dm3] 3R_15438418_INS [dm6]	T	AATAA	5.766e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	18989609	3R_18989609_SNP [dm3] 3R_23163887_SNP [dm6]	C	T	5.779e^-5	0.654	INTERGENIC
2L	12325711	2L_12325711_SNP [dm3] 2L_12325711_SNP [dm6]	C	G	5.811e^-5	0.654	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	7110241	2L_7110241_SNP [dm3] 2L_7110241_SNP [dm6]	T	C	5.828e^-5	0.654	INTRON Pvf3
3L	11402118	3L_11402118_SNP [dm3] 3L_11409018_SNP [dm6]	G	A	5.842e^-5	0.654	INTERGENIC
3L	4277052	3L_4277052_SNP [dm3] 3L_4277052_SNP [dm6]	G	A	5.863e^-5	0.654	SYNONYMOUS_CODING CG1273 UPSTREAM CG1311	TF binding site mE1_TFBS_sens
3L	11402102	3L_11402102_SNP [dm3] 3L_11409002_SNP [dm6]	T	A	5.970e^-5	0.656	INTERGENIC
4	257125	4_257125_SNP [dm3] 4_236499_SNP [dm6]	C	T	5.989e^-5	0.656	INTRON CG1674	TF binding site mE1_TFBS_kn
3R	16666232	3R_16666232_SNP [dm3] 3R_20840510_SNP [dm6]	G	T	6.072e^-5	0.656	DOWNSTREAM Synd INTERGENIC	transposable element FlyBase
2R	11878259	2R_11878259_SNP [dm3] 2R_15990754_SNP [dm6]	G	A	6.088e^-5	0.656	DOWNSTREAM Pex11 INTRON CG8314	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	15768772	2L_15768772_SNP [dm3] 2L_15768772_SNP [dm6]	A	G	6.121e^-5	0.656	SYNONYMOUS_CODING Ku80 UPSTREAM wek	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	20874245	2L_20874245_SNP [dm3] 2L_20874245_SNP [dm6]	T	A	6.165e^-5	0.656	INTRON sky & 1 other EXON CR44981	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	16326533	2L_16326533_SNP [dm3] 2L_16326533_SNP [dm6]	G	T	6.171e^-5	0.656	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	10521904	2R_10521904_SNP [dm3] 2R_14634399_SNP [dm6]	G	T	6.194e^-5	0.656	INTERGENIC
2R	15171610	2R_15171610_SNP [dm3] 2R_19284105_SNP [dm6]	G	A	6.205e^-5	0.656	UPSTREAM CG11906 DOWNSTREAM CG10476 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_GATAe mE1_TFBS_HSA
2R	10727820	2R_10727820_SNP [dm3] 2R_14840315_SNP [dm6]	A	G	6.232e^-5	0.656	INTERGENIC
3L	17141925	3L_17141925_SNP [dm3] 3L_17148825_SNP [dm6]	A	G	6.309e^-5	0.656	UPSTREAM Rbp6 INTRON Rbp6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	10413598	2R_10413598_SNP [dm3] 2R_14526093_SNP [dm6]	G	A	6.425e^-5	0.656	UPSTREAM ttv INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	19399201	X_19399201_SNP [dm3] X_19505168_SNP [dm6]	A	G	6.425e^-5	0.656	UPSTREAM Pfrx INTRON Pfrx & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	19600776	2L_19600776_SNP [dm3] 2L_19600776_SNP [dm6]	T	G	6.458e^-5	0.656	INTRON Lar & 1 other
3L	11402157	3L_11402157_SNP [dm3] 3L_11409057_SNP [dm6]	G	A	6.484e^-5	0.656	INTERGENIC
3R	20843150	3R_20843150_SNP [dm3] 3R_25017428_SNP [dm6]	C	T	6.573e^-5	0.656	SYNONYMOUS_CODING tnc
2L	15292568	2L_15292568_SNP [dm3] 2L_15292568_SNP [dm6]	T	A	6.584e^-5	0.656	UTR_5_PRIME ms_2_35Ci UPSTREAM CG15260
3R	12799447	3R_12799447_SNP [dm3] 3R_16973725_SNP [dm6]	G	A	6.586e^-5	0.656	INTERGENIC
X	5470050	X_5470050_SNP [dm3] X_5576017_SNP [dm6]	A	G	6.598e^-5	0.656	INTERGENIC
2R	10324435	2R_10324435_SNP [dm3] 2R_14436930_SNP [dm6]	A	G	6.605e^-5	0.656	INTRON Oaz	TF binding site mE1_TFBS_HSA
2R	4573080	2R_4573080_SNP [dm3] 2R_8685575_SNP [dm6]	G	C	6.639e^-5	0.656	INTERGENIC	TF binding site mE1_TFBS_inv
2R	11520811	2R_11520811_SNP [dm3] 2R_15633306_SNP [dm6]	A	G	6.645e^-5	0.656	INTRON CG42524
X	5353315	X_5353315_SNP [dm3] X_5459282_SNP [dm6]	G	A	6.717e^-5	0.659	INTRON SPR
2L	16596887	2L_16596887_SNP [dm3] 2L_16596887_SNP [dm6]	C	T	6.776e^-5	0.661	INTRON CG42389	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10438454	3R_10438454_SNP [dm3] 3R_14612732_SNP [dm6]	A	T	6.816e^-5	0.662	INTRON CG14853
3L	18269976	3L_18269976_SNP [dm3] 3L_18276876_SNP [dm6]	C	T	7.029e^-5	0.679	INTERGENIC
2L	1163679	2L_1163679_SNP [dm3] 2L_1163679_SNP [dm6]	A	G	7.190e^-5	0.687	UTR_5_PRIME CG5080 UPSTREAM IntS14 INTRON CG5080	TF binding site mE1_TFBS_cad mE1_TFBS_Trl
3L	16447907	3L_16447907_SNP [dm3] 3L_16454807_SNP [dm6]	G	A	7.205e^-5	0.687	INTRON CG33158	TF binding site BDTNP1_TFBS_dl
2L	11189726	2L_11189726_SNP [dm3] 2L_11189726_SNP [dm6]	C	A	7.258e^-5	0.687	INTRON Ca-beta	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	26319148	3R_26319148_SNP [dm3] 3R_30493426_SNP [dm6]	A	T	7.314e^-5	0.687	INTRON PH4alphaMP	TF binding site mE1_TFBS_cad
2L	14915647	2L_14915647_SNP [dm3] 2L_14915647_SNP [dm6]	A	G	7.316e^-5	0.687	INTRON CG42313
2R	19046914	2R_19046914_SNP [dm3] 2R_23159391_SNP [dm6]	G	A	7.332e^-5	0.687	SYNONYMOUS_CODING CG9899
2L	4715549	2L_4715549_SNP [dm3] 2L_4715549_SNP [dm6]	C	T	7.423e^-5	0.69	INTRON CG34351
3R	11264157	3R_11264157_SNP [dm3] 3R_15438435_SNP [dm6]	G	A	7.529e^-5	0.69	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	10572391	2L_10572391_SNP [dm3] 2L_10572391_SNP [dm6]	T	C	7.529e^-5	0.69	INTRON Trim9
2R	10105140	2R_10105140_SNP [dm3] 2R_14217635_SNP [dm6]	T	A	7.563e^-5	0.69	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	15042794	3L_15042794_SNP [dm3] 3L_15049694_SNP [dm6]	C	T	7.563e^-5	0.69	UTR_3_PRIME CG18581 UPSTREAM CG43678 DOWNSTREAM CG12310 INTRON Sytbeta	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	26333278	3R_26333278_SNP [dm3] 3R_30507556_SNP [dm6]	C	T	7.584e^-5	0.69	SPLICE_SITE_REGION CG15539 UPSTREAM CG34041 DOWNSTREAM mir-4908 INTRON CG15539
3L	8692607	3L_8692607_SNP [dm3] 3L_8699507_SNP [dm6]	A	T	7.647e^-5	0.692	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	4142730	3L_4142730_SNP [dm3] 3L_4142730_SNP [dm6]	G	A	7.701e^-5	0.692	UPSTREAM CG32260 DOWNSTREAM Akh INTRON CG32260
2L	2013356	2L_2013356_SNP [dm3] 2L_2013356_SNP [dm6]	G	A	7.736e^-5	0.692	UPSTREAM tRNA:CR31669 INTRON CG4238	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3R	23057357	3R_23057357_SNP [dm3] 3R_27231635_SNP [dm6]	T	A	7.783e^-5	0.692	UTR_3_PRIME CG31064 INTRON CG31064
2R	10324573	2R_10324573_SNP [dm3] 2R_14437068_SNP [dm6]	C	T	7.940e^-5	0.692	INTRON Oaz	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	21931883	3L_21931883_SNP [dm3] 3L_21938783_SNP [dm6]	A	C	8.082e^-5	0.692	UTR_3_PRIME DNApol-eta DOWNSTREAM CG7442
2L	16326532	2L_16326532_SNP [dm3] 2L_16326532_SNP [dm6]	A	T	8.131e^-5	0.692	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	12011465	2R_12011465_SNP [dm3] 2R_16123960_SNP [dm6]	T	C	8.199e^-5	0.692	INTRON CG30095	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_disco
3L	3843236	3L_3843236_SNP [dm3] 3L_3843236_SNP [dm6]	T	G	8.277e^-5	0.692	DOWNSTREAM enc INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
3L	11402093	3L_11402093_SNP [dm3] 3L_11408993_SNP [dm6]	G	A	8.284e^-5	0.692	INTERGENIC
2L	16596896	2L_16596896_SNP [dm3] 2L_16596896_SNP [dm6]	G	T	8.295e^-5	0.692	INTRON CG42389	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17134628	3L_17134628_SNP [dm3] 3L_17141528_SNP [dm6]	A	T	8.319e^-5	0.692	INTRON Rbp6
3L	11402083	3L_11402083_INS [dm3] 3L_11408983_INS [dm6]	A	ACATA	8.384e^-5	0.692	INTERGENIC
3R	10438368	3R_10438368_SNP [dm3] 3R_14612646_SNP [dm6]	C	T	8.460e^-5	0.692	INTRON CG14853
3R	17004554	3R_17004554_SNP [dm3] 3R_21178832_SNP [dm6]	C	T	8.490e^-5	0.692	SYNONYMOUS_CODING SNF4Agamma	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	18016855	3R_18016855_SNP [dm3] 3R_22191133_SNP [dm6]	G	A	8.501e^-5	0.692	INTRON SKIP
3L	19959309	3L_19959309_SNP [dm3] 3L_19966209_SNP [dm6]	T	A	8.527e^-5	0.692	INTRON Ac76E
3L	7195404	3L_7195404_SNP [dm3] 3L_7202304_SNP [dm6]	C	T	8.531e^-5	0.692	INTERGENIC
3R	11264156	3R_11264156_SNP [dm3] 3R_15438434_SNP [dm6]	C	A	8.546e^-5	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	15768453	2L_15768453_SNP [dm3] 2L_15768453_SNP [dm6]	A	G	8.581e^-5	0.692	UPSTREAM wek DOWNSTREAM Ku80 INTERGENIC	TF binding site BDTNP1_TFBS_Med
2L	16326259	2L_16326259_SNP [dm3] 2L_16326259_SNP [dm6]	A	G	8.597e^-5	0.692	UPSTREAM cact & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	3536270	2L_3536270_SNP [dm3] 2L_3536270_SNP [dm6]	T	A	8.607e^-5	0.692	INTERGENIC
3L	4287017	3L_4287017_INS [dm3] 3L_4287017_INS [dm6]	C	CC	8.708e^-5	0.692	UPSTREAM TfIIEbeta DOWNSTREAM CG1316 INTERGENIC	TF binding site BDTNP1_TFBS_Med
3L	18269977	3L_18269977_SNP [dm3] 3L_18276877_SNP [dm6]	T	G	8.734e^-5	0.692	INTERGENIC
3R	25964921	3R_25964921_SNP [dm3] 3R_30139199_SNP [dm6]	A	C	8.846e^-5	0.692	INTRON AdoR
3L	11402140	3L_11402140_SNP [dm3] 3L_11409040_SNP [dm6]	C	A	8.850e^-5	0.692	INTERGENIC
2L	15454213	2L_15454213_SNP [dm3] 2L_15454213_SNP [dm6]	C	A	8.866e^-5	0.692	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	2008417	2L_2008417_SNP [dm3] 2L_2008417_SNP [dm6]	T	C	8.887e^-5	0.692	UTR_5_PRIME Nplp4 UPSTREAM Nplp4 & 1 other DOWNSTREAM CR45712	TF binding site mE1_TFBS_cad
3L	11402071	3L_11402071_SNP [dm3] 3L_11408971_SNP [dm6]	C	T	8.892e^-5	0.692	INTERGENIC
3L	11402076	3L_11402076_SNP [dm3] 3L_11408976_SNP [dm6]	T	G	8.892e^-5	0.692	INTERGENIC
3R	11264153	3R_11264153_SNP [dm3] 3R_15438431_SNP [dm6]	T	A	8.913e^-5	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	11264154	3R_11264154_SNP [dm3] 3R_15438432_SNP [dm6]	T	A	8.913e^-5	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	16400307	3L_16400307_SNP [dm3] 3L_16407207_SNP [dm6]	T	C	8.935e^-5	0.692	SYNONYMOUS_CODING fax	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2L	18630287	2L_18630287_SNP [dm3] 2L_18630287_SNP [dm6]	C	A	9.012e^-5	0.692	INTRON MESR3
2L	19631005	2L_19631005_SNP [dm3] 2L_19631005_SNP [dm6]	C	A	9.051e^-5	0.692	INTRON Lar
3R	20844834	3R_20844834_SNP [dm3] 3R_25019112_SNP [dm6]	A	G	9.102e^-5	0.692	NON_SYNONYMOUS_CODING tnc	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	25266664	3R_25266664_SNP [dm3] 3R_29440942_SNP [dm6]	A	G	9.141e^-5	0.692	INTRON Ptp99A
3L	1411623	3L_1411623_SNP [dm3] 3L_1411623_SNP [dm6]	G	A	9.151e^-5	0.692	SYNONYMOUS_CODING CG9168 INTRON Ptp61F	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens
3L	4142990	3L_4142990_SNP [dm3] 3L_4142990_SNP [dm6]	T	G	9.192e^-5	0.692	UPSTREAM CG32260 DOWNSTREAM Akh INTRON CG32260
2L	20475639	2L_20475639_SNP [dm3] 2L_20475639_SNP [dm6]	C	A	9.211e^-5	0.692	INTRON CR44980	TF binding site BDTNP1_TFBS_twi
2R	10413600	2R_10413600_SNP [dm3] 2R_14526095_SNP [dm6]	A	T	9.220e^-5	0.692	UPSTREAM ttv INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3L	4277097	3L_4277097_SNP [dm3] 3L_4277097_SNP [dm6]	C	T	9.326e^-5	0.692	SYNONYMOUS_CODING CG1273 UPSTREAM CG1311	TF binding site mE1_TFBS_sens
X	4960893	X_4960893_SNP [dm3] X_5066860_SNP [dm6]	G	T	9.327e^-5	0.692	NON_SYNONYMOUS_CODING ovo	TF binding site mE1_TFBS_chinmo
3R	10450230	3R_10450230_SNP [dm3] 3R_14624508_SNP [dm6]	A	G	9.385e^-5	0.692	INTRON put	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	17947463	2R_17947463_SNP [dm3] 2R_22059958_SNP [dm6]	A	T	9.450e^-5	0.692	NON_SYNONYMOUS_CODING CG13501 UPSTREAM Snp	TF binding site mE1_TFBS_chinmo
3R	25964787	3R_25964787_SNP [dm3] 3R_30139065_SNP [dm6]	T	C	9.454e^-5	0.692	INTRON AdoR
2R	10324212	2R_10324212_SNP [dm3] 2R_14436707_SNP [dm6]	T	A	9.484e^-5	0.692	INTRON Oaz
3R	19718318	3R_19718318_SNP [dm3] 3R_23892596_SNP [dm6]	C	T	9.570e^-5	0.692	SYNONYMOUS_CODING tbrd-1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	18913151	2L_18913151_SNP [dm3] 2L_18913151_SNP [dm6]	C	G	9.589e^-5	0.692	INTERGENIC
3R	22761875	3R_22761875_SNP [dm3] 3R_26936153_SNP [dm6]	G	T	9.625e^-5	0.692	NON_SYNONYMOUS_CODING sda INTRON sda
3L	1417651	3L_1417651_SNP [dm3] 3L_1417651_SNP [dm6]	T	C	9.626e^-5	0.692	SYNONYMOUS_CODING FucTD INTRON Ptp61F	TF binding site mE1_TFBS_chinmo
X	19399342	X_19399342_SNP [dm3] X_19505309_SNP [dm6]	T	C	9.636e^-5	0.692	UPSTREAM Pfrx INTRON Pfrx & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2R	7259228	2R_7259228_SNP [dm3] 2R_11371723_SNP [dm6]	T	G	9.658e^-5	0.692	UPSTREAM Tapdelta INTERGENIC
X	3173500	X_3173500_SNP [dm3] X_3279467_SNP [dm6]	T	C	9.721e^-5	0.692	INTRON dnc
3R	23214285	3R_23214285_SNP [dm3] 3R_27388563_SNP [dm6]	T	C	9.750e^-5	0.692	SYNONYMOUS_CODING side
2L	16205609	2L_16205609_SNP [dm3] 2L_16205609_SNP [dm6]	T	A	9.890e^-5	0.692	INTERGENIC
2R	9823674	2R_9823674_SNP [dm3] 2R_13936169_SNP [dm6]	T	A	9.956e^-5	0.692	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	9826447	2R_9826447_SNP [dm3] 2R_13938942_SNP [dm6]	G	A	9.956e^-5	0.692	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd
2L	7162186	2L_7162186_SNP [dm3] 2L_7162186_SNP [dm6]	T	G	9.970e^-5	0.692	INTERGENIC
2R	7249513	2R_7249513_SNP [dm3] 2R_11362008_SNP [dm6]	T	G	9.973e^-5	0.692	NON_SYNONYMOUS_CODING Gr47b DOWNSTREAM san	TF binding site mE1_TFBS_sens
3L	12900542	3L_12900542_SNP [dm3] 3L_12907442_SNP [dm6]	A	G	9.986e^-5	0.692	INTERGENIC
2R	10912312	2R_10912312_SNP [dm3] 2R_15024807_SNP [dm6]	T	C	9.988e^-5	0.692	SYNONYMOUS_CODING Obp51a UPSTREAM CR45256 INTRON hbs	TF binding site BDTNP1_TFBS_dl
2L	19733661	2L_19733661_SNP [dm3] 2L_19733661_SNP [dm6]	T	A	9.996e^-5	0.692	NON_SYNONYMOUS_CODING CG10462	TF binding site mE1_TFBS_sens
X	6837082	X_6837082_SNP [dm3] X_6943049_SNP [dm6]	T	G	1.002e^-4	0.692	INTRON CG14431
2R	10324448	2R_10324448_SNP [dm3] 2R_14436943_SNP [dm6]	C	T	1.004e^-4	0.692	INTRON Oaz	TF binding site mE1_TFBS_HSA
2R	10324467	2R_10324467_SNP [dm3] 2R_14436962_SNP [dm6]	T	C	1.004e^-4	0.692	INTRON Oaz	TF binding site mE1_TFBS_HSA
3R	13688952	3R_13688952_SNP [dm3] 3R_17863230_SNP [dm6]	A	T	1.013e^-4	0.692	INTRON tinc
2R	17284553	2R_17284553_SNP [dm3] 2R_21397048_SNP [dm6]	G	A	1.018e^-4	0.692	INTRON Sdc
X	4831969	X_4831969_SNP [dm3] X_4937936_SNP [dm6]	G	C	1.019e^-4	0.692	INTRON CG44774	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2L	14902431	2L_14902431_SNP [dm3] 2L_14902431_SNP [dm6]	G	T	1.019e^-4	0.692	INTERGENIC
3R	25964797	3R_25964797_SNP [dm3] 3R_30139075_SNP [dm6]	A	T	1.032e^-4	0.698	INTRON AdoR
2R	16862823	2R_16862823_INS [dm3] 2R_20975318_INS [dm6]	A	AGCGTTTTGCACA...	1.045e^-4	0.704	UPSTREAM CG34115 INTERGENIC
3L	20437925	3L_20437925_SNP [dm3] 3L_20444825_SNP [dm6]	G	A	1.048e^-4	0.704	UPSTREAM CG5910 INTRON CG5910
X	5469786	X_5469786_SNP [dm3] X_5575753_SNP [dm6]	A	G	1.053e^-4	0.705	INTERGENIC
3L	20445139	3L_20445139_SNP [dm3] 3L_20452039_SNP [dm6]	T	A	1.058e^-4	0.706	SYNONYMOUS_CODING CG5199	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2L	19206397	2L_19206397_SNP [dm3] 2L_19206397_SNP [dm6]	C	T	1.063e^-4	0.706	SYNONYMOUS_CODING drl	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	17140834	3L_17140834_SNP [dm3] 3L_17147734_SNP [dm6]	G	C	1.068e^-4	0.707	START_GAINED Rbp6 UTR_5_PRIME Rbp6 INTRON Rbp6	TF binding site BDTNP1_TFBS_dl
2R	9823618	2R_9823618_SNP [dm3] 2R_13936113_SNP [dm6]	A	G	1.079e^-4	0.71	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	11402154	3L_11402154_SNP [dm3] 3L_11409054_SNP [dm6]	C	A	1.080e^-4	0.71	INTERGENIC
2L	19903028	2L_19903028_SNP [dm3] 2L_19903028_SNP [dm6]	C	A	1.104e^-4	0.724	INTRON sick	TF binding site BDTNP1_TFBS_da
2R	9821968	2R_9821968_SNP [dm3] 2R_13934463_SNP [dm6]	G	A	1.110e^-4	0.724	INTRON shot	insulator Insulator_Class_II.mE01 TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl mE1_TFBS_ttk
3R	26686990	3R_26686990_SNP [dm3] 3R_30861268_SNP [dm6]	G	A	1.112e^-4	0.724	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	15923628	2L_15923628_SNP [dm3] 2L_15923628_SNP [dm6]	A	T	1.122e^-4	0.728	INTRON beat-Ib & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	16346761	2R_16346761_SNP [dm3] 2R_20459256_SNP [dm6]	G	A	1.126e^-4	0.728	INTRON CG12484
2R	9823455	2R_9823455_SNP [dm3] 2R_13935950_SNP [dm6]	T	C	1.131e^-4	0.728	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	14276286	3L_14276286_SNP [dm3] 3L_14283186_SNP [dm6]	C	G	1.138e^-4	0.73	INTRON fz	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	10324446	2R_10324446_SNP [dm3] 2R_14436941_SNP [dm6]	G	A	1.152e^-4	0.73	INTRON Oaz	TF binding site mE1_TFBS_HSA
2R	4112996	2R_4112996_SNP [dm3] 2R_8225491_SNP [dm6]	A	C	1.155e^-4	0.73	UTR_3_PRIME LRP1
2L	15768542	2L_15768542_SNP [dm3] 2L_15768542_SNP [dm6]	G	T	1.164e^-4	0.73	UPSTREAM wek DOWNSTREAM Ku80 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	10784697	2L_10784697_SNP [dm3] 2L_10784697_SNP [dm6]	C	T	1.167e^-4	0.73	DOWNSTREAM CR44582 INTRON CG31869
X	10437080	X_10437080_SNP [dm3] X_10543047_SNP [dm6]	G	A	1.168e^-4	0.73	INTRON spri
2L	16841042	2L_16841042_SNP [dm3] 2L_16841042_SNP [dm6]	T	G	1.178e^-4	0.73	INTRON SclA & 1 other
2L	9014438	2L_9014438_SNP [dm3] 2L_9014438_SNP [dm6]	C	G	1.180e^-4	0.73	UPSTREAM Rcd-1r DOWNSTREAM CG13102 INTERGENIC
3L	10744107	3L_10744107_SNP [dm3] 3L_10751007_SNP [dm6]	G	A	1.187e^-4	0.73	INTERGENIC
2L	3181378	2L_3181378_SNP [dm3] 2L_3181378_SNP [dm6]	G	T	1.197e^-4	0.73	INTRON CG34393
2R	15110515	2R_15110515_SNP [dm3] 2R_19223010_SNP [dm6]	T	C	1.198e^-4	0.73	INTRON hppy
3L	17124024	3L_17124024_SNP [dm3] 3L_17130924_SNP [dm6]	G	A	1.204e^-4	0.73	INTRON Rbp6
2L	16810241	2L_16810241_SNP [dm3] 2L_16810241_SNP [dm6]	G	A	1.215e^-4	0.73	INTRON CG13280 & 1 other
2R	12064581	2R_12064581_SNP [dm3] 2R_16177076_SNP [dm6]	G	A	1.216e^-4	0.73	INTRON Ptp52F
2L	3598674	2L_3598674_SNP [dm3] 2L_3598674_SNP [dm6]	A	T	1.222e^-4	0.73	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	19270370	3R_19270370_SNP [dm3] 3R_23444648_SNP [dm6]	G	T	1.225e^-4	0.73	INTRON CG4374
X	14258176	X_14258176_SNP [dm3] X_14364143_SNP [dm6]	T	C	1.229e^-4	0.73	INTRON dpr8
2R	9823696	2R_9823696_SNP [dm3] 2R_13936191_SNP [dm6]	T	C	1.237e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	16862820	2R_16862820_SNP [dm3] 2R_20975315_SNP [dm6]	C	A	1.259e^-4	0.73	UPSTREAM CG34115 INTERGENIC
2L	14895050	2L_14895050_SNP [dm3] 2L_14895050_SNP [dm6]	A	C	1.266e^-4	0.73	INTERGENIC
2L	16249523	2L_16249523_SNP [dm3] 2L_16249523_SNP [dm6]	T	C	1.269e^-4	0.73	UTR_5_PRIME PRL-1 INTRON PRL-1
2L	16304318	2L_16304318_SNP [dm3] 2L_16304318_SNP [dm6]	A	G	1.270e^-4	0.73	INTRON c_2_M	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	15541779	2L_15541779_SNP [dm3] 2L_15541779_SNP [dm6]	C	T	1.274e^-4	0.73	INTERGENIC
2L	13327611	2L_13327611_SNP [dm3] 2L_13327611_SNP [dm6]	A	G	1.284e^-4	0.73	INTRON CG43778
2L	16359588	2L_16359588_SNP [dm3] 2L_16359588_SNP [dm6]	T	C	1.285e^-4	0.73	INTERGENIC
2R	13893471	2R_13893471_SNP [dm3] 2R_18005966_SNP [dm6]	G	A	1.287e^-4	0.73	INTRON dpr13 EXON CR44419
2L	16327990	2L_16327990_SNP [dm3] 2L_16327990_SNP [dm6]	A	G	1.289e^-4	0.73	SYNONYMOUS_CODING CG4278 DOWNSTREAM mRpL4	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	17210621	X_17210621_SNP [dm3] X_17316588_SNP [dm6]	A	G	1.291e^-4	0.73	INTRON B-H2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	15292706	2R_15292706_SNP [dm3] 2R_19405201_SNP [dm6]	C	T	1.291e^-4	0.73	SYNONYMOUS_CODING hts INTRON hts
2L	13910053	2L_13910053_SNP [dm3] 2L_13910053_SNP [dm6]	G	A	1.292e^-4	0.73	NON_SYNONYMOUS_CODING Ance-2 DOWNSTREAM Ance	TF binding site mE1_TFBS_cad
2R	5542720	2R_5542720_SNP [dm3] 2R_9655215_SNP [dm6]	G	T	1.295e^-4	0.73	INTRON Mmp2
X	12155223	X_12155223_SNP [dm3] X_12261190_SNP [dm6]	A	G	1.299e^-4	0.73	INTRON Ten-a	TF binding site mE1_TFBS_sens
2L	15541716	2L_15541716_SNP [dm3] 2L_15541716_SNP [dm6]	G	T	1.299e^-4	0.73	INTERGENIC
2L	3181380	2L_3181380_SNP [dm3] 2L_3181380_SNP [dm6]	A	C	1.299e^-4	0.73	INTRON CG34393
2L	4660715	2L_4660715_SNP [dm3] 2L_4660715_SNP [dm6]	A	G	1.304e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20845638	3R_20845638_SNP [dm3] 3R_25019916_SNP [dm6]	G	A	1.317e^-4	0.73	NON_SYNONYMOUS_CODING tnc	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	17858501	2R_17858501_SNP [dm3] 2R_21970996_SNP [dm6]	T	C	1.318e^-4	0.73	SYNONYMOUS_CODING CG34029 DOWNSTREAM ppk9
3R	26689565	3R_26689565_SNP [dm3] 3R_30863843_SNP [dm6]	T	A	1.322e^-4	0.73	INTERGENIC
2L	15543479	2L_15543479_SNP [dm3] 2L_15543479_SNP [dm6]	C	G	1.322e^-4	0.73	INTERGENIC
2R	20141055	2R_20141055_SNP [dm3] 2R_24253532_SNP [dm6]	T	A	1.324e^-4	0.73	SYNONYMOUS_CODING nord	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	7258132	2R_7258132_SNP [dm3] 2R_11370627_SNP [dm6]	G	T	1.340e^-4	0.73	SYNONYMOUS_CODING Tapdelta DOWNSTREAM CG13204	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	14282418	3L_14282418_SNP [dm3] 3L_14289318_SNP [dm6]	A	C	1.343e^-4	0.73	INTRON fz
2R	17856755	2R_17856755_SNP [dm3] 2R_21969250_SNP [dm6]	G	A	1.347e^-4	0.73	INTRON ppk9
3L	10050334	3L_10050334_SNP [dm3] 3L_10057234_SNP [dm6]	A	G	1.349e^-4	0.73	INTRON dpr6
2L	9412650	2L_9412650_SNP [dm3] 2L_9412650_SNP [dm6]	G	A	1.366e^-4	0.73	INTRON Shawl
3L	14274553	3L_14274553_INS [dm3] 3L_14281453_INS [dm6]	T	TGG	1.368e^-4	0.73	INTRON fz
2L	20874151	2L_20874151_SNP [dm3] 2L_20874151_SNP [dm6]	G	A	1.371e^-4	0.73	SYNONYMOUS_CODING sky UTR_3_PRIME CG43739 EXON CR44981	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	11557426	3L_11557426_SNP [dm3] 3L_11564326_SNP [dm6]	A	C	1.382e^-4	0.73	UPSTREAM CG33267 DOWNSTREAM CG7394 INTERGENIC
3L	1918282	3L_1918282_SNP [dm3] 3L_1918282_SNP [dm6]	G	A	1.393e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	2825079	2L_2825079_SNP [dm3] 2L_2825079_SNP [dm6]	C	T	1.396e^-4	0.73	SYNONYMOUS_CODING CG3123 INTRON Duox	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	6506002	X_6506002_SNP [dm3] X_6611969_SNP [dm6]	T	C	1.406e^-4	0.73	INTRON pigs	TF binding site mE1_TFBS_sens
2L	18404460	2L_18404460_SNP [dm3] 2L_18404460_SNP [dm6]	T	A	1.410e^-4	0.73	EXON CR44487
3R	15462483	3R_15462483_SNP [dm3] 3R_19636761_SNP [dm6]	A	C	1.412e^-4	0.73	DOWNSTREAM CG34138 INTRON subdued
2R	11632834	2R_11632834_SNP [dm3] 2R_15745329_SNP [dm6]	C	T	1.413e^-4	0.73	INTRON CG30089	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	5541950	2R_5541950_SNP [dm3] 2R_9654445_SNP [dm6]	T	C	1.413e^-4	0.73	INTRON Mmp2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	19955062	3L_19955062_SNP [dm3] 3L_19961962_SNP [dm6]	T	C	1.413e^-4	0.73	INTRON Ac76E
3L	1556681	3L_1556681_SNP [dm3] 3L_1556681_SNP [dm6]	C	G	1.414e^-4	0.73	SYNONYMOUS_CODING CG12099	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	2388110	2L_2388110_SNP [dm3] 2L_2388110_SNP [dm6]	A	C	1.417e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	16304529	2L_16304529_SNP [dm3] 2L_16304529_SNP [dm6]	A	C	1.419e^-4	0.73	SYNONYMOUS_CODING c_2_M	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	14838370	2R_14838370_SNP [dm3] 2R_18950865_SNP [dm6]	G	A	1.425e^-4	0.73	INTRON sano
3L	1556691	3L_1556691_SNP [dm3] 3L_1556691_SNP [dm6]	T	C	1.432e^-4	0.73	NON_SYNONYMOUS_CODING CG12099	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	14909273	2L_14909273_SNP [dm3] 2L_14909273_SNP [dm6]	A	G	1.437e^-4	0.73	INTRON CG42313	TF binding site mE1_TFBS_chinmo
3L	14083650	3L_14083650_SNP [dm3] 3L_14090550_SNP [dm6]	C	A	1.437e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13114853	3L_13114853_SNP [dm3] 3L_13121753_SNP [dm6]	C	A	1.439e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	16868970	3L_16868970_SNP [dm3] 3L_16875870_SNP [dm6]	T	C	1.439e^-4	0.73	INTRON Lmpt	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
X	15673335	X_15673335_SNP [dm3] X_15779302_SNP [dm6]	C	A	1.441e^-4	0.73	DOWNSTREAM CG43672 INTRON CG43673
3L	9525587	3L_9525587_SNP [dm3] 3L_9532487_SNP [dm6]	T	C	1.450e^-4	0.73	INTERGENIC
2R	14897096	2R_14897096_SNP [dm3] 2R_19009591_SNP [dm6]	T	A	1.455e^-4	0.73	DOWNSTREAM tn INTERGENIC
2R	14897098	2R_14897098_SNP [dm3] 2R_19009593_SNP [dm6]	A	G	1.455e^-4	0.73	DOWNSTREAM tn INTERGENIC
X	18645393	X_18645393_SNP [dm3] X_18751360_SNP [dm6]	G	A	1.459e^-4	0.73	INTERGENIC
2L	13261752	2L_13261752_SNP [dm3] 2L_13261752_SNP [dm6]	C	T	1.468e^-4	0.73	INTRON CG44085
2R	12744813	2R_12744813_SNP [dm3] 2R_16857308_SNP [dm6]	C	G	1.477e^-4	0.73	UPSTREAM snoRNA:Dek-a INTRON Dek	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	10045322	3R_10045322_SNP [dm3] 3R_14219600_SNP [dm6]	T	C	1.478e^-4	0.73	DOWNSTREAM CG33109 INTRON CG31326
3R	10438448	3R_10438448_SNP [dm3] 3R_14612726_SNP [dm6]	A	T	1.481e^-4	0.73	INTRON CG14853
2L	14332220	2L_14332220_SNP [dm3] 2L_14332220_SNP [dm6]	G	C	1.481e^-4	0.73	SYNONYMOUS_CODING ms_2_34Fe	TF binding site mE1_TFBS_cad
2L	14332232	2L_14332232_SNP [dm3] 2L_14332232_SNP [dm6]	A	G	1.481e^-4	0.73	SYNONYMOUS_CODING ms_2_34Fe	TF binding site mE1_TFBS_cad
2R	12746513	2R_12746513_SNP [dm3] 2R_16859008_SNP [dm6]	T	C	1.482e^-4	0.73	SPLICE_SITE_REGION Dek INTRON Dek
2L	16332096	2L_16332096_SNP [dm3] 2L_16332096_SNP [dm6]	G	T	1.486e^-4	0.73	NON_SYNONYMOUS_CODING CG31817
2L	16591323	2L_16591323_SNP [dm3] 2L_16591323_SNP [dm6]	C	T	1.494e^-4	0.73	INTRON CG42389	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
2R	9827856	2R_9827856_SNP [dm3] 2R_13940351_SNP [dm6]	T	C	1.499e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3L	15037607	3L_15037607_SNP [dm3] 3L_15044507_SNP [dm6]	C	A	1.501e^-4	0.73	UPSTREAM ind INTRON Sytbeta	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3R	16995090	3R_16995090_SNP [dm3] 3R_21169368_SNP [dm6]	G	A	1.507e^-4	0.73	INTRON SNF4Agamma
X	19974187	X_19974187_SNP [dm3] X_20080154_SNP [dm6]	G	C	1.507e^-4	0.73	INTERGENIC
X	19974190	X_19974190_INS [dm3] X_20080157_INS [dm6]	T	TCGCTGCCT	1.507e^-4	0.73	INTERGENIC
2L	19206385	2L_19206385_SNP [dm3] 2L_19206385_SNP [dm6]	T	G	1.507e^-4	0.73	SYNONYMOUS_CODING drl	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	15633233	3L_15633233_SNP [dm3] 3L_15640133_SNP [dm6]	C	T	1.521e^-4	0.73	INTRON comm3	TF binding site mE1_TFBS_inv
2R	3763404	2R_3763404_SNP [dm3] 2R_7875899_SNP [dm6]	C	G	1.528e^-4	0.73	INTRON Dgk
2L	5003204	2L_5003204_SNP [dm3] 2L_5003204_SNP [dm6]	A	G	1.532e^-4	0.73	INTRON Rtnl1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
2R	11874763	2R_11874763_SNP [dm3] 2R_15987258_SNP [dm6]	G	A	1.534e^-4	0.73	UTR_5_PRIME Strn-Mlck UPSTREAM CR45021 INTRON Strn-Mlck
X	16337785	X_16337785_SNP [dm3] X_16443752_SNP [dm6]	A	G	1.537e^-4	0.73	SYNONYMOUS_CODING rngo	TF binding site mE1_TFBS_cad
2R	10912320	2R_10912320_SNP [dm3] 2R_15024815_SNP [dm6]	G	A	1.541e^-4	0.73	SYNONYMOUS_CODING Obp51a UPSTREAM CR45256 INTRON hbs	TF binding site BDTNP1_TFBS_dl
2L	13911183	2L_13911183_SNP [dm3] 2L_13911183_SNP [dm6]	T	A	1.544e^-4	0.73	NON_SYNONYMOUS_CODING Ance-2 UPSTREAM Acyp	TF binding site mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
3L	17358388	3L_17358388_SNP [dm3] 3L_17365288_SNP [dm6]	C	G	1.545e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_hb mE1_TFBS_cad
3R	5027863	3R_5027863_SNP [dm3] 3R_9202141_SNP [dm6]	A	C	1.549e^-4	0.73	INTRON pum
2R	9736894	2R_9736894_SNP [dm3] 2R_13849389_SNP [dm6]	A	G	1.549e^-4	0.73	NON_SYNONYMOUS_CODING CG30484 UPSTREAM CG30485
2L	2390808	2L_2390808_SNP [dm3] 2L_2390808_SNP [dm6]	C	G	1.558e^-4	0.73	UPSTREAM VGlut & 1 other INTERGENIC	TF binding site mE1_TFBS_Kr
2L	6507662	2L_6507662_SNP [dm3] 2L_6507662_SNP [dm6]	G	A	1.559e^-4	0.73	INTRON CG31637 EXON CR44775
2R	9829823	2R_9829823_SNP [dm3] 2R_13942318_SNP [dm6]	C	A	1.573e^-4	0.73	UPSTREAM shot DOWNSTREAM DJ-1alpha INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_ttk mE1_TFBS_zfh1
3R	23057306	3R_23057306_SNP [dm3] 3R_27231584_SNP [dm6]	G	A	1.577e^-4	0.73	UTR_3_PRIME CG31064 INTRON CG31064
2L	19413547	2L_19413547_SNP [dm3] 2L_19413547_SNP [dm6]	C	A	1.578e^-4	0.73	INTRON Pax	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	1536960	3L_1536960_SNP [dm3] 3L_1536960_SNP [dm6]	A	T	1.579e^-4	0.73	UPSTREAM CG7852 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3R	19624899	3R_19624899_SNP [dm3] 3R_23799177_SNP [dm6]	C	G	1.585e^-4	0.73	NON_SYNONYMOUS_CODING mbc	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	24373753	3R_24373753_SNP [dm3] 3R_28548031_SNP [dm6]	A	G	1.595e^-4	0.73	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	18060854	3L_18060854_SNP [dm3] 3L_18067754_SNP [dm6]	G	T	1.596e^-4	0.73	DOWNSTREAM CG44006 INTERGENIC
2L	9052566	2L_9052566_SNP [dm3] 2L_9052566_SNP [dm6]	C	A	1.598e^-4	0.73	UTR_3_PRIME CG31708
3L	11390955	3L_11390955_SNP [dm3] 3L_11397855_SNP [dm6]	C	A	1.599e^-4	0.73	NON_SYNONYMOUS_CODING CG44362
2L	17092509	2L_17092509_SNP [dm3] 2L_17092509_SNP [dm6]	T	C	1.601e^-4	0.73	INTERGENIC
3R	26333129	3R_26333129_SNP [dm3] 3R_30507407_SNP [dm6]	T	C	1.602e^-4	0.73	SYNONYMOUS_CODING CG15539 UPSTREAM CG34041 DOWNSTREAM mir-4908
X	10286489	X_10286489_SNP [dm3] X_10392456_SNP [dm6]	C	T	1.604e^-4	0.73	INTRON flw
3R	15462378	3R_15462378_SNP [dm3] 3R_19636656_SNP [dm6]	A	T	1.606e^-4	0.73	SYNONYMOUS_CODING subdued DOWNSTREAM CG34138
2R	11601563	2R_11601563_SNP [dm3] 2R_15714058_SNP [dm6]	T	A	1.607e^-4	0.73	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	17143175	3L_17143175_SNP [dm3] 3L_17150075_SNP [dm6]	C	A	1.615e^-4	0.73	INTRON Rbp6	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	11047670	3L_11047670_SNP [dm3] 3L_11054570_SNP [dm6]	A	T	1.621e^-4	0.73	UPSTREAM CG7888 INTRON CG7888
3R	10605564	3R_10605564_SNP [dm3] 3R_14779842_SNP [dm6]	G	T	1.625e^-4	0.73	INTRON jvl
X	19908565	X_19908565_SNP [dm3] X_20014532_SNP [dm6]	A	T	1.625e^-4	0.73	UPSTREAM Dop2R INTRON Dop2R
2R	15826507	2R_15826507_SNP [dm3] 2R_19939002_SNP [dm6]	C	T	1.626e^-4	0.73	DOWNSTREAM CR43421 INTERGENIC
2R	14897110	2R_14897110_SNP [dm3] 2R_19009605_SNP [dm6]	T	A	1.630e^-4	0.73	DOWNSTREAM tn INTERGENIC
2L	20268694	2L_20268694_SNP [dm3] 2L_20268694_SNP [dm6]	C	T	1.641e^-4	0.73	INTERGENIC
3L	5360497	3L_5360497_INS [dm3] 3L_5367397_INS [dm6]	T	GAATG	1.652e^-4	0.73	UTR_3_PRIME CG10635 DOWNSTREAM Membrin	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
2L	5859489	2L_5859489_SNP [dm3] 2L_5859489_SNP [dm6]	A	C	1.653e^-4	0.73	DOWNSTREAM rau INTERGENIC
X	5123204	X_5123204_DEL [dm3] X_5229171_DEL [dm6]	TTT	T	1.672e^-4	0.73	INTRON CG15465 & 1 other
2R	13751662	2R_13751662_SNP [dm3] 2R_17864157_SNP [dm6]	G	A	1.673e^-4	0.73	SYNONYMOUS_CODING thr
3R	9915604	3R_9915604_INS [dm3] 3R_14089882_INS [dm6]	G	GAAG	1.674e^-4	0.73	UPSTREAM Npc2b INTRON Npc2b
3L	10050428	3L_10050428_INS [dm3] 3L_10057328_INS [dm6]	T	TGATTAAAATTGATAATATC...	1.675e^-4	0.73	INTRON dpr6
3L	11390931	3L_11390931_SNP [dm3] 3L_11397831_SNP [dm6]	C	T	1.688e^-4	0.73	NON_SYNONYMOUS_CODING CG44362
3R	25266663	3R_25266663_SNP [dm3] 3R_29440941_SNP [dm6]	T	A	1.698e^-4	0.73	INTRON Ptp99A
2R	8529431	2R_8529431_SNP [dm3] 2R_12641926_SNP [dm6]	G	A	1.703e^-4	0.73	SYNONYMOUS_CODING CG8785	TF binding site mE1_TFBS_cad
2R	10934216	2R_10934216_SNP [dm3] 2R_15046711_SNP [dm6]	A	G	1.706e^-4	0.73	INTERGENIC
2L	12609417	2L_12609417_SNP [dm3] 2L_12609417_SNP [dm6]	C	G	1.716e^-4	0.73	INTRON nub	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad
2L	21811541	2L_21811541_SNP [dm3] 2L_21811541_SNP [dm6]	T	A	1.718e^-4	0.73	INTERGENIC
2R	10521657	2R_10521657_SNP [dm3] 2R_14634152_SNP [dm6]	G	A	1.720e^-4	0.73	INTERGENIC
2R	11632828	2R_11632828_SNP [dm3] 2R_15745323_SNP [dm6]	A	C	1.732e^-4	0.73	INTRON CG30089	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	10918797	2R_10918797_SNP [dm3] 2R_15031292_SNP [dm6]	C	T	1.740e^-4	0.73	INTRON hbs	TF binding site mE1_TFBS_sens
3L	1536657	3L_1536657_SNP [dm3] 3L_1536657_SNP [dm6]	G	T	1.740e^-4	0.73	UTR_5_PRIME CG12091 UPSTREAM CG7852	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
3L	1536978	3L_1536978_SNP [dm3] 3L_1536978_SNP [dm6]	T	C	1.740e^-4	0.73	UPSTREAM CG7852 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2L	2787305	2L_2787305_SNP [dm3] 2L_2787305_SNP [dm6]	C	T	1.742e^-4	0.73	INTRON Syt1
2L	13484057	2L_13484057_SNP [dm3] 2L_13484057_SNP [dm6]	C	A	1.751e^-4	0.73	UTR_5_PRIME CG42784 INTRON CG42784	TF binding site mE1_TFBS_cad
3L	13853337	3L_13853337_SNP [dm3] 3L_13860237_SNP [dm6]	A	T	1.756e^-4	0.73	UTR_3_PRIME CG8745 DOWNSTREAM Hml	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
X	11795880	X_11795880_SNP [dm3] X_11901847_SNP [dm6]	G	T	1.757e^-4	0.73	SYNONYMOUS_CODING Upf1
3L	10050328	3L_10050328_MNP [dm3] 3L_10057228_MNP [dm6]	AAA	TTT	1.765e^-4	0.73	INTRON dpr6
3L	10050477	3L_10050477_SNP [dm3] 3L_10057377_SNP [dm6]	A	G	1.765e^-4	0.73	INTRON dpr6
3R	16709864	3R_16709864_DEL [dm3] 3R_20884142_DEL [dm6]	TCG	T	1.769e^-4	0.73	INTERGENIC	TF binding site mE1_TFBS_cad
2R	13354530	2R_13354530_SNP [dm3] 2R_17467025_SNP [dm6]	G	A	1.776e^-4	0.73	INTRON Tes	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9828007	2R_9828007_SNP [dm3] 2R_13940502_SNP [dm6]	T	A	1.779e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2R	11405142	2R_11405142_SNP [dm3] 2R_15517637_SNP [dm6]	G	T	1.780e^-4	0.73	UTR_3_PRIME Khc-73 DOWNSTREAM Khc-73
X	9094273	X_9094273_SNP [dm3] X_9200240_SNP [dm6]	G	T	1.781e^-4	0.73	INTRON su_r_
3R	20818928	3R_20818928_SNP [dm3] 3R_24993206_SNP [dm6]	A	G	1.785e^-4	0.73	INTRON tnc
3R	21268751	3R_21268751_DEL [dm3] 3R_25443029_DEL [dm6]	TCCG	T	1.788e^-4	0.73	INTRON Fur1
3R	19194151	3R_19194151_SNP [dm3] 3R_23368429_SNP [dm6]	A	C	1.791e^-4	0.73	INTERGENIC
2L	10022951	2L_10022951_SNP [dm3] 2L_10022951_SNP [dm6]	G	A	1.793e^-4	0.73	INTERGENIC
X	15673307	X_15673307_INS [dm3] X_15779274_INS [dm6]	G	AATCA	1.796e^-4	0.73	DOWNSTREAM CG43672 INTRON CG43673
2R	17087316	2R_17087316_SNP [dm3] 2R_21199811_SNP [dm6]	C	G	1.800e^-4	0.73	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
X	15673347	X_15673347_DEL [dm3] X_15779314_DEL [dm6]	GCAATTAG	G	1.801e^-4	0.73	DOWNSTREAM CG43672 INTRON CG43673
3R	15146871	3R_15146871_SNP [dm3] 3R_19321149_SNP [dm6]	C	T	1.803e^-4	0.73	INTRON Dl	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens
3L	17327035	3L_17327035_DEL [dm3] 3L_17333935_DEL [dm6]	AGA	A	1.811e^-4	0.73	UPSTREAM CR44563 INTERGENIC
2L	18482331	2L_18482331_SNP [dm3] 2L_18482331_SNP [dm6]	T	A	1.812e^-4	0.73	INTRON CG10283
2R	5543421	2R_5543421_SNP [dm3] 2R_9655916_SNP [dm6]	C	T	1.815e^-4	0.73	INTRON Mmp2
3R	10046175	3R_10046175_SNP [dm3] 3R_14220453_SNP [dm6]	T	A	1.819e^-4	0.73	UPSTREAM CG31326 DOWNSTREAM CG33109 INTERGENIC
2L	11931859	2L_11931859_SNP [dm3] 2L_11931859_SNP [dm6]	A	G	1.825e^-4	0.73	INTERGENIC
X	6699804	X_6699804_SNP [dm3] X_6805771_SNP [dm6]	G	A	1.826e^-4	0.73	UTR_5_PRIME pod1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	10050344	3L_10050344_SNP [dm3] 3L_10057244_SNP [dm6]	A	T	1.829e^-4	0.73	INTRON dpr6
2L	2919910	2L_2919910_SNP [dm3] 2L_2919910_SNP [dm6]	C	T	1.843e^-4	0.73	INTRON lilli
2L	2638676	2L_2638676_SNP [dm3] 2L_2638676_SNP [dm6]	C	T	1.844e^-4	0.73	INTERGENIC
2R	9827807	2R_9827807_SNP [dm3] 2R_13940302_SNP [dm6]	T	A	1.850e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2L	5003153	2L_5003153_SNP [dm3] 2L_5003153_SNP [dm6]	C	G	1.868e^-4	0.73	INTRON Rtnl1	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
X	4365410	X_4365410_SNP [dm3] X_4471377_SNP [dm6]	T	C	1.870e^-4	0.73	INTRON bi & 1 other
X	6403924	X_6403924_SNP [dm3] X_6509891_SNP [dm6]	A	T	1.871e^-4	0.73	INTRON CG42340	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
3L	10050456	3L_10050456_SNP [dm3] 3L_10057356_SNP [dm6]	T	C	1.873e^-4	0.73	INTRON dpr6
2R	9828073	2R_9828073_SNP [dm3] 2R_13940568_SNP [dm6]	A	G	1.878e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2R	9816042	2R_9816042_SNP [dm3] 2R_13928537_SNP [dm6]	T	C	1.883e^-4	0.73	INTRON shot
2R	11897914	2R_11897914_SNP [dm3] 2R_16010409_SNP [dm6]	G	A	1.884e^-4	0.73	SYNONYMOUS_CODING CG8388 INTRON CG8389	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	17147918	3L_17147918_SNP [dm3] 3L_17154818_SNP [dm6]	A	G	1.886e^-4	0.73	INTRON Rbp6	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	1448725	2L_1448725_SNP [dm3] 2L_1448725_SNP [dm6]	G	T	1.888e^-4	0.73	INTERGENIC
2R	5298924	2R_5298924_SNP [dm3] 2R_9411419_SNP [dm6]	G	A	1.895e^-4	0.73	INTRON wun
2L	2467845	2L_2467845_SNP [dm3] 2L_2467845_SNP [dm6]	A	T	1.910e^-4	0.73	INTERGENIC	enhancer FlyBase
3L	4288267	3L_4288267_SNP [dm3] 3L_4288267_SNP [dm6]	G	A	1.911e^-4	0.73	SYNONYMOUS_CODING TfIIEbeta UPSTREAM Hexo1	TF binding site mE1_TFBS_HSA
2R	9828021	2R_9828021_SNP [dm3] 2R_13940516_SNP [dm6]	G	A	1.912e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3L	5423707	3L_5423707_SNP [dm3] 3L_5430607_SNP [dm6]	C	T	1.913e^-4	0.73	INTRON CG34391
3L	20449226	3L_20449226_SNP [dm3] 3L_20456126_SNP [dm6]	A	G	1.915e^-4	0.73	SYNONYMOUS_CODING CG5195	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	6404048	X_6404048_SNP [dm3] X_6510015_SNP [dm6]	A	C	1.926e^-4	0.73	INTRON CG42340	TF binding site mE1_TFBS_kn
3L	10050372	3L_10050372_DEL [dm3] 3L_10057272_DEL [dm6]	TTTAAAT	T	1.934e^-4	0.73	INTRON dpr6
3L	10050383	3L_10050383_DEL [dm3] 3L_10057283_DEL [dm6]	TATGCAA	T	1.934e^-4	0.73	INTRON dpr6
3L	10050392	3L_10050392_SNP [dm3] 3L_10057292_SNP [dm6]	G	A	1.934e^-4	0.73	INTRON dpr6
2R	5342639	2R_5342639_SNP [dm3] 2R_9455134_SNP [dm6]	A	G	1.939e^-4	0.73	UPSTREAM CG33757 INTRON Camta
3L	3326793	3L_3326793_SNP [dm3] 3L_3326793_SNP [dm6]	C	T	1.941e^-4	0.73	UPSTREAM CG11526 INTRON CG11526 & 1 other	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens
3L	4159131	3L_4159131_DEL [dm3] 3L_4159131_DEL [dm6]	GG	G	1.946e^-4	0.73	INTRON nab	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z
X	6517730	X_6517730_SNP [dm3] X_6623697_SNP [dm6]	C	T	1.950e^-4	0.73	INTRON pigs
3L	9206640	3L_9206640_SNP [dm3] 3L_9213540_SNP [dm6]	G	C	1.957e^-4	0.73	SYNONYMOUS_CODING CG4476
2L	19727795	2L_19727795_SNP [dm3] 2L_19727795_SNP [dm6]	A	G	1.969e^-4	0.73	SYNONYMOUS_CODING Lar	TF binding site mE1_TFBS_chinmo
3L	10050274	3L_10050274_SNP [dm3] 3L_10057174_SNP [dm6]	C	A	1.973e^-4	0.73	INTRON dpr6
3L	10050276	3L_10050276_SNP [dm3] 3L_10057176_SNP [dm6]	T	G	1.973e^-4	0.73	INTRON dpr6
2R	11778696	2R_11778696_SNP [dm3] 2R_15891191_SNP [dm6]	T	G	1.974e^-4	0.73	START_GAINED sli UTR_5_PRIME sli UPSTREAM sli	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	20572670	3R_20572670_SNP [dm3] 3R_24746948_SNP [dm6]	G	A	1.976e^-4	0.73	SYNONYMOUS_CODING tok	TF binding site mE1_TFBS_chinmo
2R	9827500	2R_9827500_SNP [dm3] 2R_13939995_SNP [dm6]	A	G	1.976e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	8179671	3L_8179671_SNP [dm3] 3L_8186571_SNP [dm6]	T	A	1.978e^-4	0.73	UTR_5_PRIME ERR UPSTREAM ERR & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	20841390	2L_20841390_SNP [dm3] 2L_20841390_SNP [dm6]	A	G	1.979e^-4	0.73	INTRON CG31676	TF binding site mE1_TFBS_cnc
2R	9823553	2R_9823553_DEL [dm3] 2R_13936048_DEL [dm6]	GT	C	1.983e^-4	0.73	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	15146884	3R_15146884_INS [dm3] 3R_19321162_INS [dm6]	T	TTGT	1.987e^-4	0.73	INTRON Dl	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	1199024	2L_1199024_SNP [dm3] 2L_1199024_SNP [dm6]	A	G	1.989e^-4	0.73	SYNONYMOUS_CODING CG5139 UPSTREAM CG43348
2L	16205631	2L_16205631_DEL [dm3] 2L_16205631_DEL [dm6]	ATTTATGGTTGTATAC...	A	1.990e^-4	0.73	INTERGENIC
X	12221297	X_12221297_SNP [dm3] X_12327264_SNP [dm6]	A	T	1.990e^-4	0.73	INTRON Ten-a
2L	9047801	2L_9047801_SNP [dm3] 2L_9047801_SNP [dm6]	G	T	1.991e^-4	0.73	INTERGENIC
3L	19408726	3L_19408726_INS [dm3] 3L_19415626_INS [dm6]	G	TTA	1.993e^-4	0.73	INTERGENIC
3L	10050439	3L_10050439_INS [dm3] 3L_10057339_INS [dm6]	T	TAACT	1.997e^-4	0.73	INTRON dpr6
3L	10050445	3L_10050445_SNP [dm3] 3L_10057345_SNP [dm6]	A	T	1.997e^-4	0.73	INTRON dpr6
3L	10050360	3L_10050360_SNP [dm3] 3L_10057260_SNP [dm6]	A	T	2.003e^-4	0.73	INTRON dpr6
3L	13897342	3L_13897342_SNP [dm3] 3L_13904242_SNP [dm6]	C	G	2.022e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	8011618	3L_8011618_SNP [dm3] 3L_8018518_SNP [dm6]	G	A	2.024e^-4	0.73	INTRON nmo
3R	19194143	3R_19194143_SNP [dm3] 3R_23368421_SNP [dm6]	A	G	2.027e^-4	0.73	INTERGENIC
3L	1419624	3L_1419624_SNP [dm3] 3L_1419624_SNP [dm6]	C	T	2.033e^-4	0.73	INTRON Ptp61F	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	5308935	3L_5308935_SNP [dm3] 3L_5315835_SNP [dm6]	G	A	2.034e^-4	0.73	DOWNSTREAM CR45741 INTERGENIC
3L	10050296	3L_10050296_SNP [dm3] 3L_10057196_SNP [dm6]	T	A	2.035e^-4	0.73	INTRON dpr6
3R	20833102	3R_20833102_SNP [dm3] 3R_25007380_SNP [dm6]	C	A	2.037e^-4	0.73	INTRON tnc
2R	7474290	2R_7474290_SNP [dm3] 2R_11586785_SNP [dm6]	G	T	2.049e^-4	0.73	SYNONYMOUS_CODING tou	TF binding site mE1_TFBS_sens
3L	19408933	3L_19408933_SNP [dm3] 3L_19415833_SNP [dm6]	G	A	2.054e^-4	0.73	INTERGENIC
3L	13870173	3L_13870173_SNP [dm3] 3L_13877073_SNP [dm6]	A	T	2.058e^-4	0.73	INTRON dysc
3L	10050364	3L_10050364_SNP [dm3] 3L_10057264_SNP [dm6]	A	C	2.064e^-4	0.73	INTRON dpr6
2L	5003170	2L_5003170_SNP [dm3] 2L_5003170_SNP [dm6]	C	T	2.065e^-4	0.73	INTRON Rtnl1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
2L	5003172	2L_5003172_SNP [dm3] 2L_5003172_SNP [dm6]	C	T	2.065e^-4	0.73	INTRON Rtnl1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
3R	12630475	3R_12630475_SNP [dm3] 3R_16804753_SNP [dm6]	T	C	2.071e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3R	15736695	3R_15736695_SNP [dm3] 3R_19910973_SNP [dm6]	A	G	2.080e^-4	0.73	SYNONYMOUS_CODING RhoGAP92B UTR_5_PRIME RhoGAP92B UPSTREAM CR45048
2L	16415036	2L_16415036_SNP [dm3] 2L_16415036_SNP [dm6]	G	A	2.081e^-4	0.73	INTRON CG5888	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	16415039	2L_16415039_SNP [dm3] 2L_16415039_SNP [dm6]	A	C	2.081e^-4	0.73	INTRON CG5888	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	16205580	2L_16205580_SNP [dm3] 2L_16205580_SNP [dm6]	T	C	2.083e^-4	0.73	INTERGENIC
2L	18482354	2L_18482354_SNP [dm3] 2L_18482354_SNP [dm6]	A	T	2.091e^-4	0.73	INTRON CG10283
3L	6056079	3L_6056079_SNP [dm3] 3L_6062979_SNP [dm6]	A	T	2.093e^-4	0.73	UPSTREAM CG10472 INTERGENIC	TF binding site mE1_TFBS_cad
2L	12713228	2L_12713228_SNP [dm3] 2L_12713228_SNP [dm6]	C	T	2.110e^-4	0.73	UPSTREAM CG5787 DOWNSTREAM CG5792 INTERGENIC
3L	11390954	3L_11390954_SNP [dm3] 3L_11397854_SNP [dm6]	G	C	2.112e^-4	0.73	NON_SYNONYMOUS_CODING CG44362
2L	13261815	2L_13261815_SNP [dm3] 2L_13261815_SNP [dm6]	G	A	2.112e^-4	0.73	INTRON CG44085
2L	16415042	2L_16415042_SNP [dm3] 2L_16415042_SNP [dm6]	C	T	2.121e^-4	0.73	INTRON CG5888	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	7746819	3L_7746819_SNP [dm3] 3L_7753719_SNP [dm6]	C	T	2.122e^-4	0.73	UPSTREAM CG7409 INTRON CG32373
X	15673344	X_15673344_SNP [dm3] X_15779311_SNP [dm6]	T	C	2.126e^-4	0.73	DOWNSTREAM CG43672 INTRON CG43673
3R	15462285	3R_15462285_SNP [dm3] 3R_19636563_SNP [dm6]	C	T	2.138e^-4	0.73	SYNONYMOUS_CODING subdued DOWNSTREAM CG34138
3L	16872555	3L_16872555_SNP [dm3] 3L_16879455_SNP [dm6]	A	C	2.142e^-4	0.73	DOWNSTREAM CG32170 INTRON Lmpt
2R	6574390	2R_6574390_INS [dm3] 2R_10686885_INS [dm6]	G	GCG	2.147e^-4	0.73	INTRON stan
2R	16954680	2R_16954680_SNP [dm3] 2R_21067175_SNP [dm6]	C	T	2.147e^-4	0.73	UPSTREAM Cht4 DOWNSTREAM Cht9 INTERGENIC	TF binding site mE1_TFBS_cad
X	3300993	X_3300993_SNP [dm3] X_3406960_SNP [dm6]	T	A	2.152e^-4	0.73	INTRON CR44999 & 1 other
3L	10050272	3L_10050272_SNP [dm3] 3L_10057172_SNP [dm6]	T	G	2.177e^-4	0.73	INTRON dpr6
X	12221308	X_12221308_SNP [dm3] X_12327275_SNP [dm6]	C	T	2.178e^-4	0.73	INTRON Ten-a
2L	2348648	2L_2348648_SNP [dm3] 2L_2348648_SNP [dm6]	A	T	2.185e^-4	0.73	INTRON CG9967 & 1 other
X	6952669	X_6952669_DEL [dm3] X_7058636_DEL [dm6]	TGACCTATGGGCATACA...	T	2.188e^-4	0.73	INTRON CG12541	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
X	7359051	X_7359051_SNP [dm3] X_7465018_SNP [dm6]	T	C	2.191e^-4	0.73	INTERGENIC
3L	17287816	3L_17287816_SNP [dm3] 3L_17294716_SNP [dm6]	C	T	2.192e^-4	0.73	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	1419602	3L_1419602_SNP [dm3] 3L_1419602_SNP [dm6]	A	G	2.193e^-4	0.73	INTRON Ptp61F	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	25220154	3R_25220154_SNP [dm3] 3R_29394432_SNP [dm6]	G	A	2.194e^-4	0.73	INTRON Ptp99A
3L	4282030	3L_4282030_SNP [dm3] 3L_4282030_SNP [dm6]	G	A	2.194e^-4	0.73	SYNONYMOUS_CODING CG11583 DOWNSTREAM CG1311 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	4285390	3L_4285390_SNP [dm3] 3L_4285390_SNP [dm6]	C	T	2.194e^-4	0.73	INTRON CG1316
3L	4287566	3L_4287566_SNP [dm3] 3L_4287566_SNP [dm6]	G	A	2.194e^-4	0.73	SYNONYMOUS_CODING TfIIEbeta DOWNSTREAM CG1316	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3L	4287737	3L_4287737_SNP [dm3] 3L_4287737_SNP [dm6]	A	C	2.194e^-4	0.73	SYNONYMOUS_CODING TfIIEbeta UPSTREAM Hexo1 DOWNSTREAM CG1316	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	2878064	3R_2878064_SNP [dm3] 3R_7052342_SNP [dm6]	C	T	2.196e^-4	0.73	UTR_5_PRIME Sodh-1 UPSTREAM Sodh-1
3L	19944604	3L_19944604_SNP [dm3] 3L_19951504_SNP [dm6]	C	T	2.198e^-4	0.73	SYNONYMOUS_CODING CG34258 UPSTREAM CG32219 DOWNSTREAM CG33710 INTRON Ac76E
3L	4285400	3L_4285400_SNP [dm3] 3L_4285400_SNP [dm6]	G	T	2.200e^-4	0.73	INTRON CG1316
2L	2348156	2L_2348156_DEL [dm3] 2L_2348156_DEL [dm6]	AATCACT	A	2.203e^-4	0.73	INTRON CG9967 & 1 other
3R	19194133	3R_19194133_SNP [dm3] 3R_23368411_SNP [dm6]	C	A	2.203e^-4	0.73	INTERGENIC
X	16041255	X_16041255_SNP [dm3] X_16147222_SNP [dm6]	C	A	2.205e^-4	0.73	UTR_5_PRIME disco-r INTRON disco-r	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
3L	17143985	3L_17143985_SNP [dm3] 3L_17150885_SNP [dm6]	G	C	2.207e^-4	0.73	INTRON Rbp6	TF binding site mE1_TFBS_HSA
3L	11310502	3L_11310502_SNP [dm3] 3L_11317402_SNP [dm6]	G	A	2.209e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	27465648	3R_27465648_DEL [dm3] 3R_31639926_DEL [dm6]	CTCCTTCCGAGCC...	C	2.210e^-4	0.73	INTRON kek6	TF binding site mE1_TFBS_inv
3L	4280048	3L_4280048_SNP [dm3] 3L_4280048_SNP [dm6]	G	T	2.212e^-4	0.73	INTRON CG1311
3L	4281084	3L_4281084_SNP [dm3] 3L_4281084_SNP [dm6]	A	C	2.212e^-4	0.73	DOWNSTREAM CG11583 INTRON CG1311
3L	4282979	3L_4282979_SNP [dm3] 3L_4282979_SNP [dm6]	A	T	2.212e^-4	0.73	UTR_3_PRIME srw UPSTREAM CG11583 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
3L	4283389	3L_4283389_SNP [dm3] 3L_4283389_SNP [dm6]	G	A	2.212e^-4	0.73	SYNONYMOUS_CODING srw UPSTREAM CG11583 & 1 other	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
3L	4285794	3L_4285794_SNP [dm3] 3L_4285794_SNP [dm6]	G	A	2.212e^-4	0.73	INTRON CG1316
3L	4285810	3L_4285810_SNP [dm3] 3L_4285810_SNP [dm6]	C	T	2.212e^-4	0.73	INTRON CG1316
3L	4287231	3L_4287231_SNP [dm3] 3L_4287231_SNP [dm6]	C	A	2.212e^-4	0.73	UTR_5_PRIME TfIIEbeta DOWNSTREAM CG1316 INTRON TfIIEbeta	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	4287628	3L_4287628_DEL [dm3] 3L_4287628_DEL [dm6]	TT	T	2.212e^-4	0.73	SPLICE_SITE_REGION TfIIEbeta DOWNSTREAM CG1316 INTRON TfIIEbeta	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3L	4287673	3L_4287673_SNP [dm3] 3L_4287673_SNP [dm6]	T	A	2.212e^-4	0.73	UPSTREAM Hexo1 DOWNSTREAM CG1316 INTRON TfIIEbeta	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3L	4288353	3L_4288353_SNP [dm3] 3L_4288353_SNP [dm6]	C	T	2.212e^-4	0.73	UPSTREAM Hexo1 DOWNSTREAM TfIIEbeta INTERGENIC	TF binding site mE1_TFBS_HSA
3L	4288355	3L_4288355_SNP [dm3] 3L_4288355_SNP [dm6]	G	A	2.212e^-4	0.73	UPSTREAM Hexo1 DOWNSTREAM TfIIEbeta INTERGENIC	TF binding site mE1_TFBS_HSA
3L	4291196	3L_4291196_SNP [dm3] 3L_4291196_SNP [dm6]	A	C	2.212e^-4	0.73	UTR_3_PRIME Hexo1 DOWNSTREAM CG15012
3L	4291216	3L_4291216_SNP [dm3] 3L_4291216_SNP [dm6]	G	T	2.212e^-4	0.73	UTR_3_PRIME CG15012 DOWNSTREAM Hexo1
3L	4292228	3L_4292228_SNP [dm3] 3L_4292228_SNP [dm6]	C	G	2.212e^-4	0.73	UTR_5_PRIME CG15012 UPSTREAM CG1319	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	4282075	3L_4282075_SNP [dm3] 3L_4282075_SNP [dm6]	G	A	2.212e^-4	0.73	SYNONYMOUS_CODING CG11583 DOWNSTREAM CG1311 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	20455405	3L_20455405_SNP [dm3] 3L_20462305_SNP [dm6]	C	T	2.216e^-4	0.73	DOWNSTREAM mag INTRON CG5195
2R	4821642	2R_4821642_SNP [dm3] 2R_8934137_SNP [dm6]	A	C	2.218e^-4	0.73	UTR_3_PRIME CG13749 DOWNSTREAM FANCI
3R	20839763	3R_20839763_SNP [dm3] 3R_25014041_SNP [dm6]	G	T	2.219e^-4	0.73	SYNONYMOUS_CODING tnc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	12240859	3L_12240859_DEL [dm3] 3L_12247759_DEL [dm6]	AGGACCCTCA	A	2.221e^-4	0.73	INTRON app
2L	4823583	2L_4823583_SNP [dm3] 2L_4823583_SNP [dm6]	T	C	2.230e^-4	0.73	INTRON CG15628	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
3L	13565261	3L_13565261_SNP [dm3] 3L_13572161_SNP [dm6]	A	G	2.233e^-4	0.73	INTRON bru-3
3R	10438418	3R_10438418_SNP [dm3] 3R_14612696_SNP [dm6]	G	T	2.233e^-4	0.73	INTRON CG14853
3R	14866738	3R_14866738_SNP [dm3] 3R_19041016_SNP [dm6]	C	T	2.236e^-4	0.73	NON_SYNONYMOUS_CODING CG6026	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	6205856	2L_6205856_SNP [dm3] 2L_6205856_SNP [dm6]	T	G	2.244e^-4	0.73	INTRON CG34380	TF binding site BDTNP1_TFBS_da
3L	6242875	3L_6242875_SNP [dm3] 3L_6249775_SNP [dm6]	C	T	2.245e^-4	0.73	INTRON Best2
3L	10050295	3L_10050295_SNP [dm3] 3L_10057195_SNP [dm6]	G	T	2.253e^-4	0.73	INTRON dpr6
3R	11264123	3R_11264123_SNP [dm3] 3R_15438401_SNP [dm6]	G	A	2.255e^-4	0.73	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	5993061	2L_5993061_SNP [dm3] 2L_5993061_SNP [dm6]	C	G	2.262e^-4	0.73	SYNONYMOUS_CODING lid	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	8898511	X_8898511_SNP [dm3] X_9004478_SNP [dm6]	G	A	2.268e^-4	0.73	INTRON rdgA & 1 other
3L	11864945	3L_11864945_SNP [dm3] 3L_11871845_SNP [dm6]	C	T	2.269e^-4	0.73	UPSTREAM CG5906 INTRON CG44837	TF binding site mE1_TFBS_HSA
2R	4765861	2R_4765861_SNP [dm3] 2R_8878356_SNP [dm6]	C	T	2.271e^-4	0.73	SYNONYMOUS_CODING RyR	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	16273726	2R_16273726_SNP [dm3] 2R_20386221_SNP [dm6]	C	G	2.271e^-4	0.73	INTERGENIC
3L	10050265	3L_10050265_SNP [dm3] 3L_10057165_SNP [dm6]	T	A	2.272e^-4	0.73	INTRON dpr6
3R	14795450	3R_14795450_SNP [dm3] 3R_18969728_SNP [dm6]	C	T	2.274e^-4	0.73	INTRON CG42613 & 1 other
2R	17947460	2R_17947460_SNP [dm3] 2R_22059955_SNP [dm6]	T	A	2.281e^-4	0.73	NON_SYNONYMOUS_CODING CG13501 UPSTREAM Snp	TF binding site mE1_TFBS_chinmo
3L	3015515	3L_3015515_SNP [dm3] 3L_3015515_SNP [dm6]	G	A	2.286e^-4	0.73	SYNONYMOUS_CODING CG32488 DOWNSTREAM CG32487
3L	14277012	3L_14277012_SNP [dm3] 3L_14283912_SNP [dm6]	T	C	2.289e^-4	0.73	INTRON fz
3R	18914725	3R_18914725_SNP [dm3] 3R_23089003_SNP [dm6]	C	G	2.291e^-4	0.73	INTRON CG13830
3R	18094917	3R_18094917_SNP [dm3] 3R_22269195_SNP [dm6]	G	T	2.294e^-4	0.73	INTRON SKIP
2R	17947371	2R_17947371_SNP [dm3] 2R_22059866_SNP [dm6]	A	G	2.294e^-4	0.73	INTRON CG13501	TF binding site mE1_TFBS_chinmo
3L	11967519	3L_11967519_SNP [dm3] 3L_11974419_SNP [dm6]	A	C	2.301e^-4	0.731	UPSTREAM CG42397 & 1 other INTERGENIC
3L	1556679	3L_1556679_SNP [dm3] 3L_1556679_SNP [dm6]	T	C	2.315e^-4	0.732	NON_SYNONYMOUS_CODING CG12099	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	16328080	2L_16328080_DEL [dm3] 2L_16328080_DEL [dm6]	CGC	C	2.318e^-4	0.732	UTR_3_PRIME CG4278 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	6967177	2R_6967177_SNP [dm3] 2R_11079672_SNP [dm6]	A	C	2.319e^-4	0.732	INTRON luna
2R	9826909	2R_9826909_SNP [dm3] 2R_13939404_SNP [dm6]	C	T	2.320e^-4	0.732	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	18482355	2L_18482355_SNP [dm3] 2L_18482355_SNP [dm6]	A	G	2.324e^-4	0.732	INTRON CG10283
2L	4887058	2L_4887058_SNP [dm3] 2L_4887058_SNP [dm6]	A	T	2.332e^-4	0.733	INTERGENIC	TF binding site mE1_TFBS_Ubx
3L	4282773	3L_4282773_SNP [dm3] 3L_4282773_SNP [dm6]	G	A	2.333e^-4	0.733	UTR_5_PRIME CG11583 DOWNSTREAM srw	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
X	19908259	X_19908259_SNP [dm3] X_20014226_SNP [dm6]	G	A	2.360e^-4	0.74	UPSTREAM Dop2R INTRON Dop2R
2R	9494520	2R_9494520_INS [dm3] 2R_13607015_INS [dm6]	G	AAGAGTTTT	2.366e^-4	0.74	INTERGENIC
2R	17947369	2R_17947369_SNP [dm3] 2R_22059864_SNP [dm6]	G	A	2.368e^-4	0.74	INTRON CG13501	TF binding site mE1_TFBS_chinmo
2L	7187412	2L_7187412_SNP [dm3] 2L_7187412_SNP [dm6]	C	T	2.378e^-4	0.742	SYNONYMOUS_CODING CG4496	TF binding site mE1_TFBS_HSA
3R	13500129	3R_13500129_SNP [dm3] 3R_17674407_SNP [dm6]	A	C	2.382e^-4	0.742	UTR_3_PRIME alt DOWNSTREAM ald
3L	4279227	3L_4279227_SNP [dm3] 3L_4279227_SNP [dm6]	G	A	2.393e^-4	0.742	SYNONYMOUS_CODING CG1311	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	4292957	3L_4292957_SNP [dm3] 3L_4292957_SNP [dm6]	C	A	2.393e^-4	0.742	SYNONYMOUS_CODING CG1319 UPSTREAM CG15012	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_sens
2L	2008452	2L_2008452_SNP [dm3] 2L_2008452_SNP [dm6]	C	G	2.396e^-4	0.742	UTR_5_PRIME Nplp4 UPSTREAM Nplp4 & 1 other DOWNSTREAM CR45712	TF binding site mE1_TFBS_cad
2L	16304058	2L_16304058_SNP [dm3] 2L_16304058_SNP [dm6]	A	C	2.404e^-4	0.742	NON_SYNONYMOUS_CODING c_2_M	TF binding site mE1_TFBS_sens
2L	16304312	2L_16304312_INS [dm3] 2L_16304312_INS [dm6]	A	AA	2.404e^-4	0.742	SPLICE_SITE_REGION c_2_M INTRON c_2_M	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	5910364	3L_5910364_INS [dm3] 3L_5917264_INS [dm6]	A	AA	2.411e^-4	0.742	UTR_3_PRIME CG13288 DOWNSTREAM CG10483
2R	11891215	2R_11891215_SNP [dm3] 2R_16003710_SNP [dm6]	G	A	2.412e^-4	0.742	NON_SYNONYMOUS_CODING CG8370	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	4287634	3L_4287634_DEL [dm3] 3L_4287634_DEL [dm6]	ACA	A	2.419e^-4	0.742	DOWNSTREAM CG1316 INTRON TfIIEbeta	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
2R	7259356	2R_7259356_SNP [dm3] 2R_11371851_SNP [dm6]	T	C	2.422e^-4	0.742	UPSTREAM Tapdelta INTERGENIC
2R	13893497	2R_13893497_SNP [dm3] 2R_18005992_SNP [dm6]	C	A	2.424e^-4	0.742	INTRON dpr13 EXON CR44419
3R	22300665	3R_22300665_DEL [dm3] 3R_26474943_DEL [dm6]	AA	A	2.425e^-4	0.742	INTRON plum	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	11800297	2R_11800297_SNP [dm3] 2R_15912792_SNP [dm6]	T	G	2.432e^-4	0.742	INTRON sli	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Kr
3R	25266672	3R_25266672_SNP [dm3] 3R_29440950_SNP [dm6]	T	G	2.450e^-4	0.744	INTRON Ptp99A
3L	18269885	3L_18269885_SNP [dm3] 3L_18276785_SNP [dm6]	C	A	2.450e^-4	0.744	INTERGENIC
3R	10432656	3R_10432656_SNP [dm3] 3R_14606934_SNP [dm6]	T	C	2.451e^-4	0.744	SYNONYMOUS_CODING stumps	TF binding site mE1_TFBS_HSA
3R	20839760	3R_20839760_SNP [dm3] 3R_25014038_SNP [dm6]	A	C	2.470e^-4	0.744	SYNONYMOUS_CODING tnc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	16479545	2L_16479545_SNP [dm3] 2L_16479545_SNP [dm6]	T	A	2.476e^-4	0.744	INTRON dac
2L	19601578	2L_19601578_SNP [dm3] 2L_19601578_SNP [dm6]	G	T	2.483e^-4	0.744	INTRON CR44978 & 1 other
X	12149883	X_12149883_SNP [dm3] X_12255850_SNP [dm6]	T	C	2.483e^-4	0.744	INTRON Ten-a
3L	4758945	3L_4758945_SNP [dm3] 3L_4758945_SNP [dm6]	G	A	2.487e^-4	0.744	DOWNSTREAM CG13711 INTRON RhoGEF64C
2R	7833731	2R_7833731_SNP [dm3] 2R_11946226_SNP [dm6]	C	T	2.488e^-4	0.744	INTRON CG13188
2L	7808303	2L_7808303_SNP [dm3] 2L_7808303_SNP [dm6]	T	A	2.489e^-4	0.744	INTRON cdc14	TF binding site mE1_TFBS_HSA
3R	25131743	3R_25131743_SNP [dm3] 3R_29306021_SNP [dm6]	C	T	2.490e^-4	0.744	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	7427677	2L_7427677_SNP [dm3] 2L_7427677_SNP [dm6]	C	G	2.492e^-4	0.744	UPSTREAM CG5261 INTRON CG5261	TF binding site BDTNP1_TFBS_dl
2L	11887034	2L_11887034_SNP [dm3] 2L_11887034_SNP [dm6]	T	C	2.495e^-4	0.744	INTRON Pde1c
2L	19413289	2L_19413289_DEL [dm3] 2L_19413289_DEL [dm6]	GC	G	2.497e^-4	0.744	INTRON Pax	TF binding site BDTNP1_TFBS_dl
3R	11781657	3R_11781657_SNP [dm3] 3R_15955935_SNP [dm6]	A	G	2.497e^-4	0.744	INTRON Sap47
3L	10050326	3L_10050326_SNP [dm3] 3L_10057226_SNP [dm6]	C	A	2.513e^-4	0.746	INTRON dpr6
3L	8466935	3L_8466935_SNP [dm3] 3L_8473835_SNP [dm6]	C	G	2.527e^-4	0.746	SYNONYMOUS_CODING CG43163	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	18653598	3R_18653598_SNP [dm3] 3R_22827876_SNP [dm6]	C	A	2.528e^-4	0.746	UPSTREAM CR44350 INTERGENIC
3L	11391521	3L_11391521_SNP [dm3] 3L_11398421_SNP [dm6]	G	T	2.535e^-4	0.746	DOWNSTREAM CG44362 INTERGENIC
3R	10432653	3R_10432653_SNP [dm3] 3R_14606931_SNP [dm6]	G	A	2.535e^-4	0.746	SYNONYMOUS_CODING stumps	TF binding site mE1_TFBS_HSA
2R	12743612	2R_12743612_SNP [dm3] 2R_16856107_SNP [dm6]	A	G	2.539e^-4	0.746	UPSTREAM Dek & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3R	14329282	3R_14329282_SNP [dm3] 3R_18503560_SNP [dm6]	G	A	2.548e^-4	0.746	INTRON fru
3L	13375816	3L_13375816_SNP [dm3] 3L_13382716_SNP [dm6]	C	A	2.551e^-4	0.746	UPSTREAM ImpL1 INTERGENIC
2R	17856924	2R_17856924_SNP [dm3] 2R_21969419_SNP [dm6]	C	G	2.553e^-4	0.746	INTRON ppk9
2R	6882030	2R_6882030_SNP [dm3] 2R_10994525_SNP [dm6]	C	A	2.554e^-4	0.746	INTRON luna	TF binding site BDTNP1_TFBS_twi
2L	1100900	2L_1100900_SNP [dm3] 2L_1100900_SNP [dm6]	C	G	2.556e^-4	0.746	INTRON CG4629
3L	1536969	3L_1536969_SNP [dm3] 3L_1536969_SNP [dm6]	G	T	2.559e^-4	0.746	UPSTREAM CG7852 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
X	14442468	X_14442468_SNP [dm3] X_14548435_SNP [dm6]	G	A	2.569e^-4	0.746	INTERGENIC
X	11795826	X_11795826_SNP [dm3] X_11901793_SNP [dm6]	T	G	2.569e^-4	0.746	SYNONYMOUS_CODING Upf1
3L	4287019	3L_4287019_SNP [dm3] 3L_4287019_SNP [dm6]	G	A	2.570e^-4	0.746	UPSTREAM TfIIEbeta DOWNSTREAM CG1316 INTERGENIC	TF binding site BDTNP1_TFBS_Med
2L	18404418	2L_18404418_SNP [dm3] 2L_18404418_SNP [dm6]	G	A	2.570e^-4	0.746	EXON CR44487
3R	23234490	3R_23234490_SNP [dm3] 3R_27408768_SNP [dm6]	A	T	2.573e^-4	0.746	INTRON side
2L	5993070	2L_5993070_SNP [dm3] 2L_5993070_SNP [dm6]	T	C	2.575e^-4	0.746	SYNONYMOUS_CODING lid	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	13010421	3R_13010421_DEL [dm3] 3R_17184699_DEL [dm6]	TT	T	2.580e^-4	0.746	INTRON Mur89F
2R	20141046	2R_20141046_SNP [dm3] 2R_24253523_SNP [dm6]	C	A	2.584e^-4	0.746	SYNONYMOUS_CODING nord	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15462479	3R_15462479_SNP [dm3] 3R_19636757_SNP [dm6]	T	A	2.596e^-4	0.749	DOWNSTREAM CG34138 INTRON subdued
2L	21759818	2L_21759818_SNP [dm3] 2L_21759818_SNP [dm6]	T	G	2.611e^-4	0.752	INTRON CG1416
2L	8447990	2L_8447990_SNP [dm3] 2L_8447990_SNP [dm6]	C	A	2.622e^-4	0.754	NON_SYNONYMOUS_CODING U26 UTR_3_PRIME U26	TF binding site mE1_TFBS_HSA
2L	16844384	2L_16844384_SNP [dm3] 2L_16844384_SNP [dm6]	G	A	2.638e^-4	0.755	INTRON CG13284
3R	6986209	3R_6986209_DEL [dm3] 3R_11160487_DEL [dm6]	CCATGGCCA	C	2.639e^-4	0.755	UPSTREAM CG4757 DOWNSTREAM Ugt86Da INTERGENIC
2L	11871760	2L_11871760_SNP [dm3] 2L_11871760_SNP [dm6]	A	T	2.640e^-4	0.755	INTRON Pde1c
X	17210601	X_17210601_SNP [dm3] X_17316568_SNP [dm6]	A	G	2.648e^-4	0.755	INTRON B-H2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	13812509	2R_13812509_SNP [dm3] 2R_17925004_SNP [dm6]	A	T	2.649e^-4	0.755	NON_SYNONYMOUS_CODING Elk
2L	9380092	2L_9380092_SNP [dm3] 2L_9380092_SNP [dm6]	G	C	2.659e^-4	0.755	SYNONYMOUS_CODING Shawl	TF binding site mE1_TFBS_chinmo
2L	2806249	2L_2806249_SNP [dm3] 2L_2806249_SNP [dm6]	T	G	2.660e^-4	0.755	INTRON daw	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	5072290	3R_5072290_SNP [dm3] 3R_9246568_SNP [dm6]	G	T	2.660e^-4	0.755	UPSTREAM CG8420 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	25225092	3R_25225092_SNP [dm3] 3R_29399370_SNP [dm6]	C	T	2.664e^-4	0.755	INTRON Ptp99A
2L	14900805	2L_14900805_SNP [dm3] 2L_14900805_SNP [dm6]	A	C	2.666e^-4	0.755	INTERGENIC
3L	11977459	3L_11977459_SNP [dm3] 3L_11984359_SNP [dm6]	C	G	2.679e^-4	0.756	UPSTREAM CG6938 DOWNSTREAM CG43896 INTERGENIC
2L	4715574	2L_4715574_SNP [dm3] 2L_4715574_SNP [dm6]	G	A	2.687e^-4	0.756	INTRON CG34351
3L	4282920	3L_4282920_SNP [dm3] 3L_4282920_SNP [dm6]	G	T	2.691e^-4	0.756	UPSTREAM CG11583 & 1 other DOWNSTREAM srw INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_Ubx
X	6925660	X_6925660_SNP [dm3] X_7031627_SNP [dm6]	A	C	2.691e^-4	0.756	INTRON CG12541	TF binding site BDTNP1_TFBS_twi
3R	10221570	3R_10221570_DEL [dm3] 3R_14395848_DEL [dm6]	AA	A	2.696e^-4	0.756	DOWNSTREAM mir-2281 INTRON cv-c	TF binding site mE1_TFBS_cad
3L	7820444	3L_7820444_SNP [dm3] 3L_7827344_SNP [dm6]	G	A	2.700e^-4	0.756	INTRON Pdp1
2L	20839288	2L_20839288_SNP [dm3] 2L_20839288_SNP [dm6]	A	T	2.704e^-4	0.756	INTERGENIC	TF binding site mE1_TFBS_cnc
3L	3870707	3L_3870707_SNP [dm3] 3L_3870707_SNP [dm6]	C	T	2.712e^-4	0.756	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	9823575	2R_9823575_SNP [dm3] 2R_13936070_SNP [dm6]	G	A	2.712e^-4	0.756	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	13893441	2R_13893441_SNP [dm3] 2R_18005936_SNP [dm6]	G	A	2.717e^-4	0.756	INTRON dpr13 EXON CR44419
X	15252336	X_15252336_SNP [dm3] X_15358303_SNP [dm6]	A	T	2.732e^-4	0.756	DOWNSTREAM Pp1-13C INTRON acj6
3L	12426797	3L_12426797_SNP [dm3] 3L_12433697_SNP [dm6]	C	T	2.740e^-4	0.756	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_z
3L	11222207	3L_11222207_INS [dm3] 3L_11229107_INS [dm6]	A	ATA	2.741e^-4	0.756	DOWNSTREAM CG42671 INTRON CG42671
3R	18654235	3R_18654235_SNP [dm3] 3R_22828513_SNP [dm6]	G	A	2.742e^-4	0.756	INTERGENIC
X	15851031	X_15851031_SNP [dm3] X_15956998_SNP [dm6]	G	A	2.744e^-4	0.756	INTRON mmd
2L	1115133	2L_1115133_SNP [dm3] 2L_1115133_SNP [dm6]	C	T	2.747e^-4	0.756	UTR_3_PRIME Pino DOWNSTREAM CG14340
3L	12846873	3L_12846873_SNP [dm3] 3L_12853773_SNP [dm6]	A	G	2.747e^-4	0.756	UTR_5_PRIME Ent3 DOWNSTREAM Wbp2
3L	16375433	3L_16375433_SNP [dm3] 3L_16382333_SNP [dm6]	A	T	2.748e^-4	0.756	UPSTREAM CG4753 INTRON CG4729	TF binding site BDTNP1_TFBS_dl
2L	8928033	2L_8928033_SNP [dm3] 2L_8928033_SNP [dm6]	A	G	2.748e^-4	0.756	INTRON CG34398	TF binding site mE1_TFBS_cad
2R	20385984	2R_20385984_SNP [dm3] 2R_24498461_SNP [dm6]	G	T	2.758e^-4	0.758	DOWNSTREAM Ssl EXON Yu	TF binding site mE1_TFBS_chinmo
2L	8696295	2L_8696295_SNP [dm3] 2L_8696295_SNP [dm6]	C	A	2.765e^-4	0.758	INTRON Hnf4	TF binding site mE1_TFBS_cnc
2R	4752892	2R_4752892_SNP [dm3] 2R_8865387_SNP [dm6]	G	A	2.768e^-4	0.758	INTRON RyR
2R	6569957	2R_6569957_SNP [dm3] 2R_10682452_SNP [dm6]	A	T	2.773e^-4	0.758	INTRON stan	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	10446810	3R_10446810_SNP [dm3] 3R_14621088_SNP [dm6]	T	C	2.773e^-4	0.758	SYNONYMOUS_CODING put
2R	10322271	2R_10322271_SNP [dm3] 2R_14434766_SNP [dm6]	G	A	2.778e^-4	0.758	UPSTREAM CR45277 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_zfh1
2L	4715523	2L_4715523_SNP [dm3] 2L_4715523_SNP [dm6]	C	T	2.787e^-4	0.758	INTRON CG34351
3R	1952529	3R_1952529_SNP [dm3] 3R_6126807_SNP [dm6]	G	C	2.791e^-4	0.758	DOWNSTREAM CR43487 EXON CR43486
2R	18969036	2R_18969036_SNP [dm3] 2R_23081513_SNP [dm6]	T	A	2.793e^-4	0.758	UPSTREAM Gr59b INTRON Gr59a	regulatory region REDfly_CRMs
2R	4752446	2R_4752446_SNP [dm3] 2R_8864941_SNP [dm6]	A	C	2.804e^-4	0.758	INTRON RyR
2R	15391202	2R_15391202_SNP [dm3] 2R_19503697_SNP [dm6]	T	C	2.810e^-4	0.758	SYNONYMOUS_CODING CG11007	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	16108672	2L_16108672_SNP [dm3] 2L_16108672_SNP [dm6]	A	T	2.830e^-4	0.758	INTERGENIC
2L	11871761	2L_11871761_SNP [dm3] 2L_11871761_SNP [dm6]	C	T	2.833e^-4	0.758	INTRON Pde1c
3L	15217995	3L_15217995_SNP [dm3] 3L_15224895_SNP [dm6]	C	G	2.834e^-4	0.758	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens mE1_TFBS_Trl
2R	5546401	2R_5546401_DEL [dm3] 2R_9658896_DEL [dm6]	CC	C	2.837e^-4	0.758	UPSTREAM Mmp2 INTRON Mmp2
3L	10239432	3L_10239432_SNP [dm3] 3L_10246332_SNP [dm6]	G	T	2.841e^-4	0.758	UPSTREAM CR44539 INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_bab1
2L	11338481	2L_11338481_SNP [dm3] 2L_11338481_SNP [dm6]	T	G	2.842e^-4	0.758	DOWNSTREAM CR44585 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
3L	1483884	3L_1483884_SNP [dm3] 3L_1483884_SNP [dm6]	G	A	2.843e^-4	0.758	INTRON stet	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	23214318	3R_23214318_SNP [dm3] 3R_27388596_SNP [dm6]	A	G	2.852e^-4	0.758	SYNONYMOUS_CODING side	TF binding site mE1_TFBS_chinmo
3L	4285359	3L_4285359_SNP [dm3] 3L_4285359_SNP [dm6]	G	A	2.856e^-4	0.758	INTRON CG1316
3L	4285366	3L_4285366_SNP [dm3] 3L_4285366_SNP [dm6]	T	A	2.856e^-4	0.758	INTRON CG1316
3L	4291642	3L_4291642_SNP [dm3] 3L_4291642_SNP [dm6]	G	A	2.856e^-4	0.758	UPSTREAM CG1319 DOWNSTREAM Hexo1 INTRON CG15012	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
2R	10698001	2R_10698001_SNP [dm3] 2R_14810496_SNP [dm6]	T	G	2.865e^-4	0.758	DOWNSTREAM hui INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	9170608	2R_9170608_SNP [dm3] 2R_13283103_SNP [dm6]	C	T	2.874e^-4	0.758	INTRON Dh31-R
3L	4290059	3L_4290059_SNP [dm3] 3L_4290059_SNP [dm6]	C	T	2.878e^-4	0.758	SYNONYMOUS_CODING Hexo1	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	20293554	2L_20293554_SNP [dm3] 2L_20293554_SNP [dm6]	T	C	2.882e^-4	0.758	INTERGENIC	TF binding site mE1_TFBS_bab1
2L	16305028	2L_16305028_SNP [dm3] 2L_16305028_SNP [dm6]	G	A	2.884e^-4	0.758	SYNONYMOUS_CODING c_2_M DOWNSTREAM CG5861	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	4831771	X_4831771_SNP [dm3] X_4937738_SNP [dm6]	G	T	2.889e^-4	0.758	INTRON CG44774	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3L	3453993	3L_3453993_SNP [dm3] 3L_3453993_SNP [dm6]	A	G	2.892e^-4	0.758	INTRON eIF5B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	7358155	X_7358155_SNP [dm3] X_7464122_SNP [dm6]	T	C	2.893e^-4	0.758	INTERGENIC
X	14258068	X_14258068_SNP [dm3] X_14364035_SNP [dm6]	C	A	2.905e^-4	0.758	INTRON dpr8
3R	10950219	3R_10950219_SNP [dm3] 3R_15124497_SNP [dm6]	G	A	2.906e^-4	0.758	INTRON CG42788
2L	15300421	2L_15300421_SNP [dm3] 2L_15300421_SNP [dm6]	T	A	2.907e^-4	0.758	INTERGENIC
2L	14993250	2L_14993250_SNP [dm3] 2L_14993250_SNP [dm6]	A	G	2.913e^-4	0.758	INTRON mol
2L	1448724	2L_1448724_SNP [dm3] 2L_1448724_SNP [dm6]	T	C	2.917e^-4	0.758	INTERGENIC
X	15252342	X_15252342_DEL [dm3] X_15358309_DEL [dm6]	TA	T	2.918e^-4	0.758	DOWNSTREAM Pp1-13C INTRON acj6
2L	5459277	2L_5459277_SNP [dm3] 2L_5459277_SNP [dm6]	G	A	2.918e^-4	0.758	INTERGENIC	TF binding site BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2L	11190060	2L_11190060_SNP [dm3] 2L_11190060_SNP [dm6]	T	A	2.920e^-4	0.758	INTRON Ca-beta	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	17790706	3R_17790706_SNP [dm3] 3R_21964984_SNP [dm6]	A	T	2.921e^-4	0.758	INTRON Eip93F
2R	9823566	2R_9823566_INS [dm3] 2R_13936061_INS [dm6]	A	AAAA	2.924e^-4	0.758	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	14329279	3R_14329279_INS [dm3] 3R_18503557_INS [dm6]	T	TGT	2.928e^-4	0.758	INTRON fru
2L	16349704	2L_16349704_SNP [dm3] 2L_16349704_SNP [dm6]	A	C	2.930e^-4	0.758	INTRON CG42231 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	15182173	2R_15182173_SNP [dm3] 2R_19294668_SNP [dm6]	T	C	2.936e^-4	0.758	INTRON Tab2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	11385912	3L_11385912_INS [dm3] 3L_11392812_INS [dm6]	C	CAC	2.939e^-4	0.758	INTERGENIC
2R	15505258	2R_15505258_SNP [dm3] 2R_19617753_SNP [dm6]	T	A	2.941e^-4	0.758	INTRON sm	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
X	19908317	X_19908317_DEL [dm3] X_20014284_DEL [dm6]	ATTTAGTATTACCATA...	A	2.942e^-4	0.758	UPSTREAM Dop2R INTRON Dop2R
3L	8468923	3L_8468923_SNP [dm3] 3L_8475823_SNP [dm6]	A	T	2.948e^-4	0.758	SYNONYMOUS_CODING CG43163	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
2L	11076962	2L_11076962_SNP [dm3] 2L_11076962_SNP [dm6]	A	G	2.949e^-4	0.758	SYNONYMOUS_CODING AstC DOWNSTREAM CG43725	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA
2R	18070418	2R_18070418_SNP [dm3] 2R_22182913_SNP [dm6]	T	G	2.957e^-4	0.758	UPSTREAM MED16 & 1 other DOWNSTREAM CG11275 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA
3R	25731635	3R_25731635_DEL [dm3] 3R_29905913_DEL [dm6]	GG	G	2.963e^-4	0.758	INTRON CG15515
3L	21054501	3L_21054501_SNP [dm3] 3L_21061401_SNP [dm6]	C	A	2.969e^-4	0.758	INTRON siz	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	20844843	3R_20844843_SNP [dm3] 3R_25019121_SNP [dm6]	C	A	2.971e^-4	0.758	NON_SYNONYMOUS_CODING tnc	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	25966414	3R_25966414_SNP [dm3] 3R_30140692_SNP [dm6]	A	C	2.973e^-4	0.758	INTRON AdoR	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	1008173	2L_1008173_SNP [dm3] 2L_1008173_SNP [dm6]	G	A	2.975e^-4	0.758	DOWNSTREAM IA-2 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_Trl
3R	18653721	3R_18653721_SNP [dm3] 3R_22827999_SNP [dm6]	C	A	2.981e^-4	0.758	UPSTREAM CR44350 INTERGENIC
2R	10006024	2R_10006024_SNP [dm3] 2R_14118519_SNP [dm6]	C	G	2.981e^-4	0.758	INTRON Prosap
X	8250917	X_8250917_SNP [dm3] X_8356884_SNP [dm6]	A	T	2.989e^-4	0.758	INTRON nAChRalpha3
2R	11639298	2R_11639298_SNP [dm3] 2R_15751793_SNP [dm6]	G	A	2.990e^-4	0.758	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	11641285	2R_11641285_SNP [dm3] 2R_15753780_SNP [dm6]	C	T	3.001e^-4	0.759	INTRON CG30089
3R	17169418	3R_17169418_SNP [dm3] 3R_21343696_SNP [dm6]	T	C	3.009e^-4	0.759	INTRON CG16791
3R	21266970	3R_21266970_SNP [dm3] 3R_25441248_SNP [dm6]	G	T	3.012e^-4	0.759	INTRON Fur1
3R	18653612	3R_18653612_SNP [dm3] 3R_22827890_SNP [dm6]	T	C	3.025e^-4	0.759	UPSTREAM CR44350 INTERGENIC
3R	15462530	3R_15462530_SNP [dm3] 3R_19636808_SNP [dm6]	C	G	3.041e^-4	0.759	SYNONYMOUS_CODING subdued DOWNSTREAM CG34138
3R	10296292	3R_10296292_SNP [dm3] 3R_14470570_SNP [dm6]	C	T	3.043e^-4	0.759	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10976502	3L_10976502_SNP [dm3] 3L_10983402_SNP [dm6]	T	G	3.050e^-4	0.759	SYNONYMOUS_CODING klu	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10267057	2R_10267057_SNP [dm3] 2R_14379552_SNP [dm6]	C	A	3.055e^-4	0.759	INTRON Dh44-R1
2L	14902666	2L_14902666_DEL [dm3] 2L_14902666_DEL [dm6]	GGTGGG	C	3.056e^-4	0.759	INTERGENIC
2L	13908831	2L_13908831_SNP [dm3] 2L_13908831_SNP [dm6]	T	C	3.059e^-4	0.759	UPSTREAM Ance-2 INTRON Ance	TF binding site mE1_TFBS_cad
2R	9831067	2R_9831067_SNP [dm3] 2R_13943562_SNP [dm6]	T	C	3.060e^-4	0.759	UTR_3_PRIME AGO1 UPSTREAM DJ-1alpha DOWNSTREAM AGO1
2L	9113686	2L_9113686_SNP [dm3] 2L_9113686_SNP [dm6]	T	C	3.087e^-4	0.759	DOWNSTREAM Or30a INTERGENIC
2L	10784772	2L_10784772_SNP [dm3] 2L_10784772_SNP [dm6]	A	C	3.102e^-4	0.759	DOWNSTREAM CR44582 INTRON CG31869
2L	13333095	2L_13333095_SNP [dm3] 2L_13333095_SNP [dm6]	G	T	3.104e^-4	0.759	INTERGENIC
3L	12555314	3L_12555314_SNP [dm3] 3L_12562214_SNP [dm6]	T	G	3.104e^-4	0.759	INTRON sowah
2L	8306864	2L_8306864_SNP [dm3] 2L_8306864_SNP [dm6]	T	A	3.105e^-4	0.759	DOWNSTREAM CG7840 INTRON Ostgamma
X	8251585	X_8251585_SNP [dm3] X_8357552_SNP [dm6]	T	A	3.112e^-4	0.759	INTRON nAChRalpha3
3L	5885641	3L_5885641_SNP [dm3] 3L_5892541_SNP [dm6]	A	T	3.113e^-4	0.759	INTERGENIC
3L	7280098	3L_7280098_DEL [dm3] 3L_7286998_DEL [dm6]	TTT	T	3.113e^-4	0.759	INTRON unc-13-4A
3L	7280104	3L_7280104_SNP [dm3] 3L_7287004_SNP [dm6]	T	A	3.113e^-4	0.759	INTRON unc-13-4A
2L	11786244	2L_11786244_SNP [dm3] 2L_11786244_SNP [dm6]	C	T	3.119e^-4	0.759	INTERGENIC	TF binding site mE1_TFBS_inv
2L	16332095	2L_16332095_SNP [dm3] 2L_16332095_SNP [dm6]	C	A	3.120e^-4	0.759	NON_SYNONYMOUS_CODING CG31817
2R	8925229	2R_8925229_SNP [dm3] 2R_13037724_SNP [dm6]	T	C	3.128e^-4	0.759	INTERGENIC
3R	14686099	3R_14686099_SNP [dm3] 3R_18860377_SNP [dm6]	T	C	3.129e^-4	0.759	INTERGENIC
2R	11639353	2R_11639353_SNP [dm3] 2R_15751848_SNP [dm6]	T	C	3.131e^-4	0.759	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	11639356	2R_11639356_SNP [dm3] 2R_15751851_SNP [dm6]	A	T	3.131e^-4	0.759	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	5542715	2R_5542715_SNP [dm3] 2R_9655210_SNP [dm6]	A	G	3.133e^-4	0.759	INTRON Mmp2
2R	10318456	2R_10318456_SNP [dm3] 2R_14430951_SNP [dm6]	G	A	3.133e^-4	0.759	INTRON phyl	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	19320498	2L_19320498_SNP [dm3] 2L_19320498_SNP [dm6]	A	C	3.136e^-4	0.759	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_Kr
3R	17238872	3R_17238872_SNP [dm3] 3R_21413150_SNP [dm6]	A	G	3.137e^-4	0.759	INTRON lbl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12711158	2L_12711158_SNP [dm3] 2L_12711158_SNP [dm6]	G	C	3.138e^-4	0.759	SYNONYMOUS_CODING CG5787	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	10438460	3R_10438460_SNP [dm3] 3R_14612738_SNP [dm6]	C	A	3.138e^-4	0.759	INTRON CG14853
X	9329816	X_9329816_SNP [dm3] X_9435783_SNP [dm6]	A	G	3.139e^-4	0.759	INTRON mgl
3R	20840478	3R_20840478_SNP [dm3] 3R_25014756_SNP [dm6]	G	A	3.142e^-4	0.759	NON_SYNONYMOUS_CODING tnc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	14902309	2L_14902309_SNP [dm3] 2L_14902309_SNP [dm6]	T	C	3.151e^-4	0.759	INTERGENIC
3R	3150170	3R_3150170_SNP [dm3] 3R_7324448_SNP [dm6]	T	C	3.154e^-4	0.759	INTERGENIC
2R	6193601	2R_6193601_SNP [dm3] 2R_10306096_SNP [dm6]	C	A	3.154e^-4	0.759	DOWNSTREAM JhI-1 INTRON CAP	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	13495321	X_13495321_SNP [dm3] X_13601288_SNP [dm6]	T	C	3.160e^-4	0.759	INTRON up
3R	14329376	3R_14329376_SNP [dm3] 3R_18503654_SNP [dm6]	A	G	3.166e^-4	0.759	INTRON fru
2L	11931870	2L_11931870_SNP [dm3] 2L_11931870_SNP [dm6]	C	A	3.176e^-4	0.759	INTERGENIC
2L	6574031	2L_6574031_SNP [dm3] 2L_6574031_SNP [dm6]	A	G	3.179e^-4	0.759	SYNONYMOUS_CODING CG11319
2R	6194192	2R_6194192_SNP [dm3] 2R_10306687_SNP [dm6]	C	A	3.179e^-4	0.759	UTR_3_PRIME CAP DOWNSTREAM JhI-1
3R	10434567	3R_10434567_SNP [dm3] 3R_14608845_SNP [dm6]	C	T	3.180e^-4	0.759	UPSTREAM CG14853 DOWNSTREAM stumps INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	6338449	X_6338449_SNP [dm3] X_6444416_SNP [dm6]	G	C	3.181e^-4	0.759	INTRON CG42340
X	6190789	X_6190789_SNP [dm3] X_6296756_SNP [dm6]	C	G	3.183e^-4	0.759	SYNONYMOUS_CODING CG3815	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	4279824	3L_4279824_SNP [dm3] 3L_4279824_SNP [dm6]	C	T	3.191e^-4	0.759	SYNONYMOUS_CODING CG1311	TF binding site mE1_TFBS_sens
2R	12681405	2R_12681405_SNP [dm3] 2R_16793900_SNP [dm6]	G	C	3.193e^-4	0.759	DOWNSTREAM CG15919 INTRON CG15615
2R	13751935	2R_13751935_SNP [dm3] 2R_17864430_SNP [dm6]	T	C	3.197e^-4	0.759	SYNONYMOUS_CODING thr	TF binding site BDTNP1_TFBS_z
2L	12933575	2L_12933575_SNP [dm3] 2L_12933575_SNP [dm6]	C	G	3.197e^-4	0.759	INTERGENIC
3R	14874681	3R_14874681_SNP [dm3] 3R_19048959_SNP [dm6]	G	A	3.198e^-4	0.759	SYNONYMOUS_CODING cdi	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	18576217	3R_18576217_SNP [dm3] 3R_22750495_SNP [dm6]	T	A	3.210e^-4	0.759	NON_SYNONYMOUS_CODING rumi UTR_5_PRIME rumi UPSTREAM Usp12-46 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	9047527	2L_9047527_DEL [dm3] 2L_9047527_DEL [dm6]	AA	A	3.212e^-4	0.759	INTERGENIC
2L	17317417	2L_17317417_SNP [dm3] 2L_17317417_SNP [dm6]	A	C	3.214e^-4	0.759	INTERGENIC
2L	3961379	2L_3961379_SNP [dm3] 2L_3961379_SNP [dm6]	G	A	3.215e^-4	0.759	INTRON fred
X	12755055	X_12755055_SNP [dm3] X_12861022_SNP [dm6]	C	A	3.215e^-4	0.759	INTRON Pde9
X	3069440	X_3069440_SNP [dm3] X_3175407_SNP [dm6]	C	G	3.218e^-4	0.759	UTR_5_PRIME CG3939 UPSTREAM Fcp3C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_sens mE1_TFBS_Trl
3R	21688830	3R_21688830_DEL [dm3] 3R_25863108_DEL [dm6]	GACG	G	3.228e^-4	0.759	INTRON CG5890
X	17299361	X_17299361_SNP [dm3] X_17405328_SNP [dm6]	T	C	3.231e^-4	0.759	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	15826741	2R_15826741_SNP [dm3] 2R_19939236_SNP [dm6]	C	T	3.236e^-4	0.759	DOWNSTREAM CR43421 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	17288016	3L_17288016_SNP [dm3] 3L_17294916_SNP [dm6]	G	A	3.239e^-4	0.759	INTERGENIC
3R	25266671	3R_25266671_SNP [dm3] 3R_29440949_SNP [dm6]	A	T	3.254e^-4	0.759	INTRON Ptp99A
2R	16865151	2R_16865151_SNP [dm3] 2R_20977646_SNP [dm6]	C	T	3.255e^-4	0.759	UTR_3_PRIME CG15650 DOWNSTREAM CG34115 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	10050299	3L_10050299_SNP [dm3] 3L_10057199_SNP [dm6]	A	T	3.264e^-4	0.759	INTRON dpr6
3L	13115051	3L_13115051_SNP [dm3] 3L_13121951_SNP [dm6]	A	G	3.267e^-4	0.759	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	932119	2L_932119_DEL [dm3] 2L_932119_DEL [dm6]	AAA	A	3.268e^-4	0.759	INTRON CG4341	TF binding site mE1_TFBS_chinmo
3L	13421733	3L_13421733_SNP [dm3] 3L_13428633_SNP [dm6]	C	T	3.270e^-4	0.759	DOWNSTREAM CG10713 INTERGENIC
2L	5003179	2L_5003179_SNP [dm3] 2L_5003179_SNP [dm6]	G	A	3.278e^-4	0.759	INTRON Rtnl1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
3R	17238926	3R_17238926_INS [dm3] 3R_21413204_INS [dm6]	GA	TGTT	3.281e^-4	0.759	INTRON lbl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16845024	2L_16845024_SNP [dm3] 2L_16845024_SNP [dm6]	A	T	3.283e^-4	0.759	INTRON CG13284
3L	1419616	3L_1419616_SNP [dm3] 3L_1419616_SNP [dm6]	A	G	3.289e^-4	0.759	INTRON Ptp61F	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	15442782	2L_15442782_SNP [dm3] 2L_15442782_SNP [dm6]	G	A	3.290e^-4	0.759	DOWNSTREAM CR44862 INTERGENIC
2L	3466464	2L_3466464_SNP [dm3] 2L_3466464_SNP [dm6]	C	T	3.290e^-4	0.759	UPSTREAM msl-2 DOWNSTREAM CG3238 INTRON Pdsw	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	9043011	2L_9043011_SNP [dm3] 2L_9043011_SNP [dm6]	T	G	3.292e^-4	0.759	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15034026	3R_15034026_SNP [dm3] 3R_19208304_SNP [dm6]	T	A	3.305e^-4	0.759	INTERGENIC
2R	20446062	2R_20446062_SNP [dm3] 2R_24558539_SNP [dm6]	G	A	3.313e^-4	0.759	UTR_3_PRIME ITP DOWNSTREAM Nurf-38
2L	7110232	2L_7110232_SNP [dm3] 2L_7110232_SNP [dm6]	A	T	3.319e^-4	0.759	INTRON Pvf3
3R	14685863	3R_14685863_SNP [dm3] 3R_18860141_SNP [dm6]	G	T	3.322e^-4	0.759	INTERGENIC
3R	13855580	3R_13855580_SNP [dm3] 3R_18029858_SNP [dm6]	T	A	3.332e^-4	0.759	INTERGENIC
2L	11647762	2L_11647762_SNP [dm3] 2L_11647762_SNP [dm6]	G	A	3.332e^-4	0.759	SYNONYMOUS_CODING CG6614	TF binding site mE1_TFBS_sens
X	8252242	X_8252242_INS [dm3] X_8358209_INS [dm6]	T	TCT	3.333e^-4	0.759	INTRON nAChRalpha3
X	8252246	X_8252246_SNP [dm3] X_8358213_SNP [dm6]	C	T	3.333e^-4	0.759	INTRON nAChRalpha3
X	15426609	X_15426609_SNP [dm3] X_15532576_SNP [dm6]	A	G	3.335e^-4	0.759	INTRON Ac13E	TF binding site BDTNP1_TFBS_twi
X	8903670	X_8903670_SNP [dm3] X_9009637_SNP [dm6]	T	C	3.336e^-4	0.759	INTRON rdgA & 1 other
3L	14152701	3L_14152701_SNP [dm3] 3L_14159601_SNP [dm6]	T	C	3.339e^-4	0.759	INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2L	21773113	2L_21773113_SNP [dm3] 2L_21773113_SNP [dm6]	G	A	3.346e^-4	0.759	SYNONYMOUS_CODING CG31612
2L	15300520	2L_15300520_SNP [dm3] 2L_15300520_SNP [dm6]	T	C	3.346e^-4	0.759	INTERGENIC
2L	19206382	2L_19206382_SNP [dm3] 2L_19206382_SNP [dm6]	T	C	3.349e^-4	0.759	SYNONYMOUS_CODING drl	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	12776371	2L_12776371_SNP [dm3] 2L_12776371_SNP [dm6]	G	T	3.354e^-4	0.759	INTERGENIC
2L	17302476	2L_17302476_SNP [dm3] 2L_17302476_SNP [dm6]	A	C	3.358e^-4	0.759	INTERGENIC	TF binding site mE1_TFBS_sbb
2L	10444659	2L_10444659_DEL [dm3] 2L_10444659_DEL [dm6]	CTGTGGTC	C	3.362e^-4	0.759	INTRON loh
3L	16069978	3L_16069978_SNP [dm3] 3L_16076878_SNP [dm6]	T	A	3.367e^-4	0.759	INTRON Mbs
3L	16069986	3L_16069986_SNP [dm3] 3L_16076886_SNP [dm6]	C	T	3.367e^-4	0.759	INTRON Mbs
3L	14274560	3L_14274560_SNP [dm3] 3L_14281460_SNP [dm6]	T	C	3.369e^-4	0.759	INTRON fz
2R	9778191	2R_9778191_SNP [dm3] 2R_13890686_SNP [dm6]	T	G	3.375e^-4	0.759	SYNONYMOUS_CODING shot INTRON shot	TF binding site mE1_TFBS_sens
X	6455185	X_6455185_SNP [dm3] X_6561152_SNP [dm6]	G	C	3.375e^-4	0.759	NON_SYNONYMOUS_CODING CG34417
3R	6927653	3R_6927653_SNP [dm3] 3R_11101931_SNP [dm6]	G	A	3.384e^-4	0.759	DOWNSTREAM CR45579 INTERGENIC
3R	6927824	3R_6927824_SNP [dm3] 3R_11102102_SNP [dm6]	A	C	3.384e^-4	0.759	DOWNSTREAM CR45579 INTERGENIC
3R	22911391	3R_22911391_SNP [dm3] 3R_27085669_SNP [dm6]	T	C	3.392e^-4	0.76	INTRON Cpr97Ea
3R	21593418	3R_21593418_SNP [dm3] 3R_25767696_SNP [dm6]	T	C	3.399e^-4	0.76	INTERGENIC
2R	10267039	2R_10267039_SNP [dm3] 2R_14379534_SNP [dm6]	A	T	3.410e^-4	0.761	INTRON Dh44-R1
3L	1005947	3L_1005947_SNP [dm3] 3L_1005947_SNP [dm6]	A	C	3.411e^-4	0.761	INTRON trio
2L	21769397	2L_21769397_SNP [dm3] 2L_21769397_SNP [dm6]	C	A	3.418e^-4	0.761	INTRON CG31612	transposable element FlyBase
2L	14998262	2L_14998262_SNP [dm3] 2L_14998262_SNP [dm6]	C	T	3.420e^-4	0.761	UPSTREAM mol INTERGENIC
2L	5409004	2L_5409004_SNP [dm3] 2L_5409004_SNP [dm6]	G	T	3.424e^-4	0.761	INTRON H15
2L	12325591	2L_12325591_SNP [dm3] 2L_12325591_SNP [dm6]	C	A	3.425e^-4	0.761	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	9170656	2R_9170656_SNP [dm3] 2R_13283151_SNP [dm6]	T	C	3.442e^-4	0.762	INTRON Dh31-R
X	15415630	X_15415630_SNP [dm3] X_15521597_SNP [dm6]	T	A	3.443e^-4	0.762	INTRON Ac13E
2L	14912763	2L_14912763_SNP [dm3] 2L_14912763_SNP [dm6]	T	A	3.455e^-4	0.762	INTRON CG42313
2L	10096897	2L_10096897_SNP [dm3] 2L_10096897_SNP [dm6]	A	G	3.459e^-4	0.762	INTRON CG44153 & 1 other
2L	3327797	2L_3327797_SNP [dm3] 2L_3327797_SNP [dm6]	C	T	3.460e^-4	0.762	UPSTREAM CG33282 INTERGENIC
3R	12630476	3R_12630476_SNP [dm3] 3R_16804754_SNP [dm6]	C	A	3.460e^-4	0.762	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2R	2574382	2R_2574382_SNP [dm3] 2R_6686877_SNP [dm6]	A	T	3.461e^-4	0.762	INTRON CG9422 & 1 other	TF binding site mE1_TFBS_cad
3L	12749413	3L_12749413_SNP [dm3] 3L_12756313_SNP [dm6]	A	G	3.470e^-4	0.763	INTRON CG32113
3L	11341612	3L_11341612_SNP [dm3] 3L_11348512_SNP [dm6]	A	T	3.492e^-4	0.764	DOWNSTREAM CR45251 INTERGENIC
X	4912786	X_4912786_SNP [dm3] X_5018753_SNP [dm6]	A	T	3.501e^-4	0.764	INTRON CR44833	TF binding site mE1_TFBS_inv
3R	21339542	3R_21339542_SNP [dm3] 3R_25513820_SNP [dm6]	G	T	3.501e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3L	14282421	3L_14282421_SNP [dm3] 3L_14289321_SNP [dm6]	T	C	3.503e^-4	0.764	INTRON fz
2R	8609264	2R_8609264_INS [dm3] 2R_12721759_INS [dm6]	T	TATGAA	3.504e^-4	0.764	INTRON CG42663
2R	8609267	2R_8609267_SNP [dm3] 2R_12721762_SNP [dm6]	G	T	3.504e^-4	0.764	INTRON CG42663
2R	8609268	2R_8609268_DEL [dm3] 2R_12721763_DEL [dm6]	GAAAAC	G	3.504e^-4	0.764	INTRON CG42663
X	6094622	X_6094622_SNP [dm3] X_6200589_SNP [dm6]	G	A	3.513e^-4	0.764	SPLICE_SITE_REGION vanin-like SYNONYMOUS_CODING vanin-like UPSTREAM CG43090
2R	15171833	2R_15171833_SNP [dm3] 2R_19284328_SNP [dm6]	T	C	3.514e^-4	0.764	UPSTREAM CG11906 DOWNSTREAM CG10476 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	1419540	3L_1419540_SNP [dm3] 3L_1419540_SNP [dm6]	G	A	3.515e^-4	0.764	INTRON Ptp61F	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2L	13333081	2L_13333081_SNP [dm3] 2L_13333081_SNP [dm6]	C	A	3.522e^-4	0.764	INTERGENIC
3R	13000186	3R_13000186_SNP [dm3] 3R_17174464_SNP [dm6]	C	T	3.529e^-4	0.764	INTRON Mur89F
3L	15148281	3L_15148281_SNP [dm3] 3L_15155181_SNP [dm6]	G	A	3.538e^-4	0.764	SYNONYMOUS_CODING Msh6 DOWNSTREAM FucTA
3L	12426729	3L_12426729_SNP [dm3] 3L_12433629_SNP [dm6]	C	T	3.541e^-4	0.764	UPSTREAM toe INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_z
3R	9861658	3R_9861658_SNP [dm3] 3R_14035936_SNP [dm6]	T	C	3.552e^-4	0.764	UTR_5_PRIME CG9922 DOWNSTREAM CG3061	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
X	14789723	X_14789723_SNP [dm3] X_14895690_SNP [dm6]	T	C	3.553e^-4	0.764	INTRON Flo2 & 1 other
2L	12713231	2L_12713231_SNP [dm3] 2L_12713231_SNP [dm6]	A	T	3.554e^-4	0.764	UPSTREAM CG5787 DOWNSTREAM CG5792 INTERGENIC
3R	18576206	3R_18576206_SNP [dm3] 3R_22750484_SNP [dm6]	A	G	3.557e^-4	0.764	NON_SYNONYMOUS_CODING rumi UTR_5_PRIME rumi UPSTREAM Usp12-46 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	18061900	3L_18061900_SNP [dm3] 3L_18068800_SNP [dm6]	A	T	3.564e^-4	0.764	UTR_3_PRIME CG44006
3R	6927357	3R_6927357_SNP [dm3] 3R_11101635_SNP [dm6]	C	T	3.579e^-4	0.764	EXON CR45579
X	14789710	X_14789710_DEL [dm3] X_14895677_DEL [dm6]	TT	T	3.582e^-4	0.764	INTRON Flo2 & 1 other
2R	17042104	2R_17042104_SNP [dm3] 2R_21154599_SNP [dm6]	A	G	3.585e^-4	0.764	SYNONYMOUS_CODING CG30389 INTRON CG30389	TF binding site mE1_TFBS_cad
2L	15768337	2L_15768337_SNP [dm3] 2L_15768337_SNP [dm6]	T	A	3.586e^-4	0.764	UTR_5_PRIME wek DOWNSTREAM Ku80	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3L	561566	3L_561566_SNP [dm3] 3L_561566_SNP [dm6]	C	A	3.594e^-4	0.764	INTRON hipk	TF binding site BDTNP1_TFBS_twi
2L	4696598	2L_4696598_SNP [dm3] 2L_4696598_SNP [dm6]	A	G	3.594e^-4	0.764	INTRON CG34351	TF binding site mE1_TFBS_cad
2L	20824972	2L_20824972_SNP [dm3] 2L_20824972_SNP [dm6]	T	A	3.603e^-4	0.764	UPSTREAM CG9331 INTRON CG9331	TF binding site mE1_TFBS_Trl
3L	15037335	3L_15037335_SNP [dm3] 3L_15044235_SNP [dm6]	C	T	3.603e^-4	0.764	UPSTREAM ind INTRON Sytbeta	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
2L	18825198	2L_18825198_SNP [dm3] 2L_18825198_SNP [dm6]	T	A	3.614e^-4	0.764	INTRON CG17323	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	4385208	3L_4385208_SNP [dm3] 3L_4385208_SNP [dm6]	G	A	3.615e^-4	0.764	INTRON slow
3L	20440782	3L_20440782_SNP [dm3] 3L_20447682_SNP [dm6]	A	T	3.616e^-4	0.764	INTRON CG5910	enhancer mE1_CBP_Enhancers
2L	20840263	2L_20840263_SNP [dm3] 2L_20840263_SNP [dm6]	G	A	3.619e^-4	0.764	UPSTREAM CG31676 INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sbb
2R	17081878	2R_17081878_DEL [dm3] 2R_21194373_DEL [dm6]	TGT	T	3.623e^-4	0.764	INTRON Lapsyn	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA
3L	14282420	3L_14282420_SNP [dm3] 3L_14289320_SNP [dm6]	C	G	3.627e^-4	0.764	INTRON fz
2L	15578700	2L_15578700_INS [dm3] 2L_15578700_INS [dm6]	A	ATTCAATA	3.634e^-4	0.764	INTRON kek3	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	22906063	3R_22906063_SNP [dm3] 3R_27080341_SNP [dm6]	A	G	3.634e^-4	0.764	INTRON CG14257
3R	22906080	3R_22906080_SNP [dm3] 3R_27080358_SNP [dm6]	T	C	3.634e^-4	0.764	INTRON CG14257
2R	13893391	2R_13893391_SNP [dm3] 2R_18005886_SNP [dm6]	G	C	3.636e^-4	0.764	INTRON dpr13 EXON CR44419
2L	13419234	2L_13419234_SNP [dm3] 2L_13419234_SNP [dm6]	C	T	3.638e^-4	0.764	UTR_5_PRIME CG43850 INTRON CG43850 & 1 other
3R	22906092	3R_22906092_SNP [dm3] 3R_27080370_SNP [dm6]	T	G	3.638e^-4	0.764	INTRON CG14257
2L	19733730	2L_19733730_SNP [dm3] 2L_19733730_SNP [dm6]	C	T	3.641e^-4	0.764	SYNONYMOUS_CODING CG10462	TF binding site mE1_TFBS_sens
3R	10438421	3R_10438421_SNP [dm3] 3R_14612699_SNP [dm6]	G	T	3.643e^-4	0.764	INTRON CG14853
3R	24638374	3R_24638374_SNP [dm3] 3R_28812652_SNP [dm6]	A	T	3.648e^-4	0.764	DOWNSTREAM snoRNA:291 INTRON CG1646	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
2L	16303958	2L_16303958_SNP [dm3] 2L_16303958_SNP [dm6]	G	A	3.651e^-4	0.764	NON_SYNONYMOUS_CODING c_2_M
2L	11203741	2L_11203741_SNP [dm3] 2L_11203741_SNP [dm6]	G	A	3.653e^-4	0.764	UPSTREAM Ca-beta INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	13177022	2R_13177022_INS [dm3] 2R_17289517_INS [dm6]	G	GG	3.661e^-4	0.764	INTRON mbl
X	3438374	X_3438374_SNP [dm3] X_3544341_SNP [dm6]	T	C	3.666e^-4	0.764	INTRON CG32791
2L	15453604	2L_15453604_SNP [dm3] 2L_15453604_SNP [dm6]	G	T	3.678e^-4	0.764	INTERGENIC
3L	16420367	3L_16420367_SNP [dm3] 3L_16427267_SNP [dm6]	A	G	3.679e^-4	0.764	INTRON CG33158 & 1 other
3R	2887456	3R_2887456_SNP [dm3] 3R_7061734_SNP [dm6]	G	A	3.682e^-4	0.764	SYNONYMOUS_CODING djl UPSTREAM CG1988
2R	6197619	2R_6197619_SNP [dm3] 2R_10310114_SNP [dm6]	G	C	3.684e^-4	0.764	START_GAINED CG12909 UTR_5_PRIME CG12909 UPSTREAM JhI-1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
X	6952663	X_6952663_DEL [dm3] X_7058630_DEL [dm6]	CGGCG	C	3.685e^-4	0.764	INTRON CG12541	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
2L	3466587	2L_3466587_SNP [dm3] 2L_3466587_SNP [dm6]	G	A	3.690e^-4	0.764	UPSTREAM msl-2 DOWNSTREAM CG3238 INTRON Pdsw	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2R	18744681	2R_18744681_SNP [dm3] 2R_22857158_SNP [dm6]	A	G	3.692e^-4	0.764	SYNONYMOUS_CODING inaD	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	18691176	2L_18691176_SNP [dm3] 2L_18691176_SNP [dm6]	C	T	3.735e^-4	0.764	NON_SYNONYMOUS_CODING CG10383 DOWNSTREAM CG10336
3L	12900557	3L_12900557_DEL [dm3] 3L_12907457_DEL [dm6]	TT	T	3.739e^-4	0.764	INTERGENIC
2R	9776977	2R_9776977_SNP [dm3] 2R_13889472_SNP [dm6]	G	T	3.745e^-4	0.764	NON_SYNONYMOUS_CODING shot INTRON shot
3R	15170652	3R_15170652_SNP [dm3] 3R_19344930_SNP [dm6]	A	C	3.760e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	16845002	2L_16845002_SNP [dm3] 2L_16845002_SNP [dm6]	G	A	3.760e^-4	0.764	INTRON CG13284
2L	14906529	2L_14906529_SNP [dm3] 2L_14906529_SNP [dm6]	G	T	3.766e^-4	0.764	DOWNSTREAM CG42313 INTERGENIC
3L	3142206	3L_3142206_SNP [dm3] 3L_3142206_SNP [dm6]	G	A	3.773e^-4	0.764	INTRON CG11537	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	12401735	X_12401735_SNP [dm3] X_12507702_SNP [dm6]	A	G	3.775e^-4	0.764	INTRON CG2556	TF binding site BDTNP1_TFBS_da
2L	16845027	2L_16845027_INS [dm3] 2L_16845027_INS [dm6]	T	TTA	3.777e^-4	0.764	INTRON CG13284
2L	14478816	2L_14478816_SNP [dm3] 2L_14478816_SNP [dm6]	G	A	3.784e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10434525	3R_10434525_SNP [dm3] 3R_14608803_SNP [dm6]	T	C	3.788e^-4	0.764	UPSTREAM CG14853 DOWNSTREAM stumps INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	16864365	2R_16864365_SNP [dm3] 2R_20976860_SNP [dm6]	T	G	3.803e^-4	0.764	UTR_3_PRIME CG34115 UPSTREAM CG9344 DOWNSTREAM CG15650	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	15497201	2L_15497201_SNP [dm3] 2L_15497201_SNP [dm6]	C	A	3.807e^-4	0.764	INTERGENIC
3R	13525686	3R_13525686_SNP [dm3] 3R_17699964_SNP [dm6]	G	A	3.815e^-4	0.764	INTRON osa
3R	25164560	3R_25164560_SNP [dm3] 3R_29338838_SNP [dm6]	A	G	3.819e^-4	0.764	INTERGENIC
3L	2357981	3L_2357981_SNP [dm3] 3L_2357981_SNP [dm6]	G	A	3.820e^-4	0.764	INTERGENIC
2R	11400756	2R_11400756_SNP [dm3] 2R_15513251_SNP [dm6]	A	T	3.824e^-4	0.764	UPSTREAM GalNAc-T1 INTRON GalNAc-T1
3L	10071584	3L_10071584_SNP [dm3] 3L_10078484_SNP [dm6]	C	T	3.833e^-4	0.764	INTRON dpr6	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	18677129	2L_18677129_SNP [dm3] 2L_18677129_SNP [dm6]	G	T	3.837e^-4	0.764	UPSTREAM CG31751 & 1 other INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Ubx
3R	26319119	3R_26319119_SNP [dm3] 3R_30493397_SNP [dm6]	C	T	3.839e^-4	0.764	INTRON PH4alphaMP	TF binding site mE1_TFBS_cad
3L	561109	3L_561109_SNP [dm3] 3L_561109_SNP [dm6]	A	G	3.840e^-4	0.764	INTRON hipk
2R	4065875	2R_4065875_SNP [dm3] 2R_8178370_SNP [dm6]	G	A	3.840e^-4	0.764	INTRON LRP1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	2357932	2L_2357932_SNP [dm3] 2L_2357932_SNP [dm6]	T	C	3.844e^-4	0.764	UTR_3_PRIME eys UPSTREAM CG9967	TF binding site mE1_TFBS_HSA
2L	14440571	2L_14440571_SNP [dm3] 2L_14440571_SNP [dm6]	G	A	3.845e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	1878989	2L_1878989_SNP [dm3] 2L_1878989_SNP [dm6]	A	G	3.845e^-4	0.764	INTRON CG31663
3L	9789133	3L_9789133_SNP [dm3] 3L_9796033_SNP [dm6]	T	C	3.846e^-4	0.764	INTRON Zasp67
2L	20125683	2L_20125683_SNP [dm3] 2L_20125683_SNP [dm6]	C	T	3.852e^-4	0.764	INTERGENIC
2L	13916238	2L_13916238_SNP [dm3] 2L_13916238_SNP [dm6]	C	G	3.856e^-4	0.764	INTRON Ance-3	TF binding site BDTNP1_TFBS_twi
2L	9043214	2L_9043214_SNP [dm3] 2L_9043214_SNP [dm6]	G	C	3.858e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25277545	3R_25277545_SNP [dm3] 3R_29451823_SNP [dm6]	C	G	3.858e^-4	0.764	INTRON Ptp99A
3L	13114806	3L_13114806_SNP [dm3] 3L_13121706_SNP [dm6]	C	T	3.862e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	9777078	2R_9777078_SNP [dm3] 2R_13889573_SNP [dm6]	A	G	3.865e^-4	0.764	SYNONYMOUS_CODING shot INTRON shot
3R	26653612	3R_26653612_SNP [dm3] 3R_30827890_SNP [dm6]	T	G	3.867e^-4	0.764	UTR_5_PRIME CG15544 DOWNSTREAM cindr
3L	4410480	3L_4410480_SNP [dm3] 3L_4410480_SNP [dm6]	C	T	3.869e^-4	0.764	INTRON DOR	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_Trl
3L	13870172	3L_13870172_SNP [dm3] 3L_13877072_SNP [dm6]	G	T	3.874e^-4	0.764	INTRON dysc
2L	3466439	2L_3466439_SNP [dm3] 2L_3466439_SNP [dm6]	C	A	3.878e^-4	0.764	UPSTREAM msl-2 DOWNSTREAM CG3238 INTRON Pdsw	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2R	10826894	2R_10826894_SNP [dm3] 2R_14939389_SNP [dm6]	G	A	3.879e^-4	0.764	UTR_3_PRIME Lap1
3R	22829132	3R_22829132_SNP [dm3] 3R_27003410_SNP [dm6]	C	G	3.879e^-4	0.764	SYNONYMOUS_CODING CG6296 DOWNSTREAM CG31077 INTRON RYa-R
X	9593738	X_9593738_DEL [dm3] X_9699705_DEL [dm6]	AA	A	3.891e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3R	12630531	3R_12630531_SNP [dm3] 3R_16804809_SNP [dm6]	C	T	3.894e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	18885406	2L_18885406_DEL [dm3] 2L_18885406_DEL [dm6]	AGC	T	3.895e^-4	0.764	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	21815438	2L_21815438_SNP [dm3] 2L_21815438_SNP [dm6]	C	T	3.895e^-4	0.764	INTERGENIC
2R	10772202	2R_10772202_SNP [dm3] 2R_14884697_SNP [dm6]	A	C	3.896e^-4	0.764	DOWNSTREAM Cyp6a20 & 1 other INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3R	15462503	3R_15462503_SNP [dm3] 3R_19636781_SNP [dm6]	C	T	3.897e^-4	0.764	DOWNSTREAM CG34138 INTRON subdued
X	18287938	X_18287938_SNP [dm3] X_18393905_SNP [dm6]	A	G	3.902e^-4	0.764	INTRON CG32549
3L	5887955	3L_5887955_SNP [dm3] 3L_5894855_SNP [dm6]	T	G	3.905e^-4	0.764	DOWNSTREAM Pole2 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18460526	2L_18460526_SNP [dm3] 2L_18460526_SNP [dm6]	C	T	3.909e^-4	0.764	INTRON let-7-C
3L	2547135	3L_2547135_SNP [dm3] 3L_2547135_SNP [dm6]	C	A	3.910e^-4	0.764	INTRON Spn
2R	11897010	2R_11897010_SNP [dm3] 2R_16009505_SNP [dm6]	C	T	3.918e^-4	0.764	NON_SYNONYMOUS_CODING CG8388 INTRON CG8389	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
3R	13688825	3R_13688825_SNP [dm3] 3R_17863103_SNP [dm6]	G	A	3.922e^-4	0.764	INTRON tinc
2L	16845015	2L_16845015_SNP [dm3] 2L_16845015_SNP [dm6]	T	A	3.928e^-4	0.764	INTRON CG13284
2R	2574309	2R_2574309_SNP [dm3] 2R_6686804_SNP [dm6]	T	A	3.928e^-4	0.764	INTRON CG9422 & 1 other
2R	4490364	2R_4490364_SNP [dm3] 2R_8602859_SNP [dm6]	T	C	3.931e^-4	0.764	INTRON rgr	TF binding site mE1_TFBS_cad
2L	11073125	2L_11073125_DEL [dm3] 2L_11073125_DEL [dm6]	GCTATTTTG	G	3.932e^-4	0.764	INTERGENIC	TF binding site mE1_TFBS_cad
X	12640022	X_12640022_SNP [dm3] X_12745989_SNP [dm6]	A	T	3.933e^-4	0.764	UPSTREAM CG4004 INTRON CG4004	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3R	4273025	3R_4273025_SNP [dm3] 3R_8447303_SNP [dm6]	G	A	3.936e^-4	0.764	INTRON CG45263
2R	18227271	2R_18227271_SNP [dm3] 2R_22339766_SNP [dm6]	C	T	3.939e^-4	0.764	SYNONYMOUS_CODING Liprin-gamma	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	20818799	3R_20818799_SNP [dm3] 3R_24993077_SNP [dm6]	C	T	3.941e^-4	0.764	INTRON tnc
X	12401734	X_12401734_SNP [dm3] X_12507701_SNP [dm6]	G	A	3.941e^-4	0.764	INTRON CG2556	TF binding site BDTNP1_TFBS_da
2L	3466452	2L_3466452_SNP [dm3] 2L_3466452_SNP [dm6]	C	A	3.944e^-4	0.764	UPSTREAM msl-2 DOWNSTREAM CG3238 INTRON Pdsw	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	3466453	2L_3466453_SNP [dm3] 2L_3466453_SNP [dm6]	A	G	3.944e^-4	0.764	UPSTREAM msl-2 DOWNSTREAM CG3238 INTRON Pdsw	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3R	2886410	3R_2886410_SNP [dm3] 3R_7060688_SNP [dm6]	A	G	3.945e^-4	0.764	UPSTREAM djl DOWNSTREAM dj INTERGENIC	regulatory region REDfly_CRMs transposable element FlyBase
2L	9412649	2L_9412649_SNP [dm3] 2L_9412649_SNP [dm6]	G	A	3.949e^-4	0.764	INTRON Shawl
2L	3573422	2L_3573422_SNP [dm3] 2L_3573422_SNP [dm6]	G	C	3.952e^-4	0.764	INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_cad mE1_TFBS_Trl
3L	3022838	3L_3022838_SNP [dm3] 3L_3022838_SNP [dm6]	A	C	3.959e^-4	0.765	INTERGENIC
3L	16872489	3L_16872489_SNP [dm3] 3L_16879389_SNP [dm6]	G	A	3.969e^-4	0.766	DOWNSTREAM CG32170 INTRON Lmpt
3R	25966499	3R_25966499_SNP [dm3] 3R_30140777_SNP [dm6]	G	T	3.984e^-4	0.768	INTRON AdoR	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	5950842	3R_5950842_SNP [dm3] 3R_10125120_SNP [dm6]	T	C	3.985e^-4	0.768	INTRON knk
2L	20872520	2L_20872520_SNP [dm3] 2L_20872520_SNP [dm6]	G	A	3.992e^-4	0.768	UTR_3_PRIME sky & 1 other DOWNSTREAM CG14401 & 1 other
2L	4036916	2L_4036916_SNP [dm3] 2L_4036916_SNP [dm6]	A	G	3.996e^-4	0.768	INTRON ed
3R	17823983	3R_17823983_SNP [dm3] 3R_21998261_SNP [dm6]	T	C	4.000e^-4	0.768	INTRON Eip93F
2L	18433088	2L_18433088_SNP [dm3] 2L_18433088_SNP [dm6]	T	A	4.001e^-4	0.768	UPSTREAM CR44488 INTERGENIC
X	8554688	X_8554688_SNP [dm3] X_8660655_SNP [dm6]	G	C	4.017e^-4	0.769	INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2R	17022463	2R_17022463_SNP [dm3] 2R_21134958_SNP [dm6]	T	C	4.020e^-4	0.769	INTRON Magi	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16844958	2L_16844958_SNP [dm3] 2L_16844958_SNP [dm6]	A	G	4.021e^-4	0.769	INTRON CG13284
2L	7110205	2L_7110205_SNP [dm3] 2L_7110205_SNP [dm6]	A	T	4.027e^-4	0.769	INTRON Pvf3
3L	10311716	3L_10311716_SNP [dm3] 3L_10318616_SNP [dm6]	C	A	4.029e^-4	0.769	INTERGENIC
X	18645418	X_18645418_SNP [dm3] X_18751385_SNP [dm6]	T	A	4.045e^-4	0.77	INTERGENIC
2L	16419937	2L_16419937_SNP [dm3] 2L_16419937_SNP [dm6]	G	T	4.047e^-4	0.77	INTRON CG5888
2L	9035330	2L_9035330_SNP [dm3] 2L_9035330_SNP [dm6]	T	C	4.047e^-4	0.77	INTERGENIC
2R	7891336	2R_7891336_SNP [dm3] 2R_12003831_SNP [dm6]	G	A	4.049e^-4	0.77	SYNONYMOUS_CODING otk	TF binding site mE1_TFBS_chinmo
2R	15171736	2R_15171736_SNP [dm3] 2R_19284231_SNP [dm6]	G	T	4.052e^-4	0.77	UPSTREAM CG11906 DOWNSTREAM CG10476 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_GATAe mE1_TFBS_HSA
2R	11776542	2R_11776542_SNP [dm3] 2R_15889037_SNP [dm6]	C	T	4.063e^-4	0.771	INTRON sli	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	16863507	3L_16863507_SNP [dm3] 3L_16870407_SNP [dm6]	A	C	4.074e^-4	0.772	INTRON Lmpt
2R	11632670	2R_11632670_SNP [dm3] 2R_15745165_SNP [dm6]	T	G	4.089e^-4	0.773	INTRON CG30089	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	20822556	3R_20822556_SNP [dm3] 3R_24996834_SNP [dm6]	A	C	4.091e^-4	0.773	INTRON tnc	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
3R	20844398	3R_20844398_SNP [dm3] 3R_25018676_SNP [dm6]	C	T	4.091e^-4	0.773	SYNONYMOUS_CODING tnc
3L	9862058	3L_9862058_SNP [dm3] 3L_9868958_SNP [dm6]	T	C	4.098e^-4	0.773	INTRON CG8108	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	18825199	2L_18825199_SNP [dm3] 2L_18825199_SNP [dm6]	A	T	4.108e^-4	0.773	INTRON CG17323	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	12734516	2R_12734516_SNP [dm3] 2R_16847011_SNP [dm6]	A	G	4.118e^-4	0.773	INTERGENIC
3L	11864544	3L_11864544_SNP [dm3] 3L_11871444_SNP [dm6]	A	T	4.125e^-4	0.773	UPSTREAM CG5906 INTRON CG44837	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	16863506	3L_16863506_SNP [dm3] 3L_16870406_SNP [dm6]	C	A	4.137e^-4	0.773	INTRON Lmpt
3L	16872534	3L_16872534_SNP [dm3] 3L_16879434_SNP [dm6]	T	C	4.141e^-4	0.773	DOWNSTREAM CG32170 INTRON Lmpt
3R	27653428	3R_27653428_SNP [dm3] 3R_31827706_SNP [dm6]	G	C	4.142e^-4	0.773	UPSTREAM RhoGAP100F INTRON RhoGAP100F
2L	21740504	2L_21740504_SNP [dm3] 2L_21740504_SNP [dm6]	C	A	4.143e^-4	0.773	UTR_3_PRIME step DOWNSTREAM step

By genomic position
Variant impact
Gene name

cpo_CT phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results