DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=6.490e^-2)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

510 significant hits at p-value < 0.001.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

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Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2R	3766135	2R_3766135_SNP [dm3] 2R_7878630_SNP [dm6]	C	A	2.537e^-5	0.868	INTRON Dgk
2R	5289894	2R_5289894_SNP [dm3] 2R_9402389_SNP [dm6]	C	T	2.537e^-5	0.868	INTRON wun	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
2L	12260779	2L_12260779_SNP [dm3] 2L_12260779_SNP [dm6]	T	C	2.754e^-5	0.868	INTRON aret
2L	12260801	2L_12260801_DEL [dm3] 2L_12260801_DEL [dm6]	ACTTTCCA	A	2.754e^-5	0.868	INTRON aret
2L	12260853	2L_12260853_SNP [dm3] 2L_12260853_SNP [dm6]	A	T	2.754e^-5	0.868	INTRON aret
2L	12260866	2L_12260866_SNP [dm3] 2L_12260866_SNP [dm6]	T	A	2.754e^-5	0.868	INTRON aret
2R	3771872	2R_3771872_SNP [dm3] 2R_7884367_SNP [dm6]	G	A	3.488e^-5	0.868	INTRON Dgk
2L	12260810	2L_12260810_SNP [dm3] 2L_12260810_SNP [dm6]	C	G	4.389e^-5	0.868	INTRON aret
2R	2958232	2R_2958232_DEL [dm3] 2R_7070727_DEL [dm6]	AA	A	7.429e^-5	0.868	UTR_3_PRIME CG12831 UPSTREAM tRNA:CR30298 DOWNSTREAM tRNA:CR30299 & 1 other
X	6090968	X_6090968_SNP [dm3] X_6196935_SNP [dm6]	C	T	8.006e^-5	0.868	NON_SYNONYMOUS_CODING CG32751 UPSTREAM CG32750
2L	19914150	2L_19914150_SNP [dm3] 2L_19914150_SNP [dm6]	C	T	9.005e^-5	0.868	UPSTREAM Victoria INTRON sick
2L	8000439	2L_8000439_SNP [dm3] 2L_8000439_SNP [dm6]	T	A	9.005e^-5	0.868	SPLICE_SITE_REGION Wwox DOWNSTREAM Sirup INTRON Wwox	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	6110370	3L_6110370_SNP [dm3] 3L_6117270_SNP [dm6]	G	A	9.285e^-5	0.868	INTRON Ets65A
2L	19914141	2L_19914141_SNP [dm3] 2L_19914141_SNP [dm6]	A	C	9.815e^-5	0.868	UPSTREAM Victoria INTRON sick
2L	19878723	2L_19878723_SNP [dm3] 2L_19878723_SNP [dm6]	T	G	1.024e^-4	0.868	INTRON sick
2R	3006922	2R_3006922_SNP [dm3] 2R_7119417_SNP [dm6]	G	T	1.025e^-4	0.868	INTRON esn
2R	4956040	2R_4956040_SNP [dm3] 2R_9068535_SNP [dm6]	G	T	1.025e^-4	0.868	UPSTREAM ana INTRON ana
3L	11458536	3L_11458536_INS [dm3] 3L_11465436_INS [dm6]	T	TT	1.108e^-4	0.868	UPSTREAM CG6140 INTRON CG6140	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cnc mE1_TFBS_HSA
2L	19019165	2L_19019165_SNP [dm3] 2L_19019165_SNP [dm6]	A	C	1.145e^-4	0.868	DOWNSTREAM CR44184 INTERGENIC
2L	19019177	2L_19019177_SNP [dm3] 2L_19019177_SNP [dm6]	T	G	1.145e^-4	0.868	DOWNSTREAM CR44184 INTERGENIC
2L	19019180	2L_19019180_SNP [dm3] 2L_19019180_SNP [dm6]	C	A	1.145e^-4	0.868	DOWNSTREAM CR44184 INTERGENIC
2L	19685598	2L_19685598_SNP [dm3] 2L_19685598_SNP [dm6]	A	T	1.145e^-4	0.868	INTRON Lar	TF binding site BDTNP1_TFBS_Med
2R	3519173	2R_3519173_SNP [dm3] 2R_7631668_SNP [dm6]	T	C	1.297e^-4	0.868	INTRON CG43340 EXON CR45131	insulator Insulator_Class_II.mE01 TF binding site mE1_TFBS_cnc
X	17073108	X_17073108_SNP [dm3] X_17179075_SNP [dm6]	T	C	1.300e^-4	0.868	INTRON baz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	19901020	2R_19901020_SNP [dm3] 2R_24013497_SNP [dm6]	T	C	1.305e^-4	0.868	INTRON Unc-89
3L	5123281	3L_5123281_SNP [dm3] 3L_5130181_SNP [dm6]	A	G	1.305e^-4	0.868	NON_SYNONYMOUS_CODING CG4597
2L	20331779	2L_20331779_SNP [dm3] 2L_20331779_SNP [dm6]	T	C	1.447e^-4	0.868	INTRON spir
3R	16252124	3R_16252124_SNP [dm3] 3R_20426402_SNP [dm6]	G	A	1.492e^-4	0.868	INTRON Gfrl
3R	16252166	3R_16252166_SNP [dm3] 3R_20426444_SNP [dm6]	A	T	1.492e^-4	0.868	INTRON Gfrl
3R	16252434	3R_16252434_SNP [dm3] 3R_20426712_SNP [dm6]	G	A	1.492e^-4	0.868	INTRON Gfrl
2R	8245338	2R_8245338_SNP [dm3] 2R_12357833_SNP [dm6]	C	T	1.570e^-4	0.868	SYNONYMOUS_CODING CG30049
2R	18397773	2R_18397773_SNP [dm3] 2R_22510268_SNP [dm6]	T	G	1.605e^-4	0.868	INTRON px	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
2R	18551246	2R_18551246_SNP [dm3] 2R_22663741_SNP [dm6]	T	A	1.608e^-4	0.868	UTR_5_PRIME CG4250 DOWNSTREAM CG42566
2R	18551247	2R_18551247_SNP [dm3] 2R_22663742_SNP [dm6]	A	T	1.608e^-4	0.868	START_GAINED CG4250 UTR_5_PRIME CG4250 DOWNSTREAM CG42566
2R	7548726	2R_7548726_SNP [dm3] 2R_11661221_SNP [dm6]	C	T	1.608e^-4	0.868	UPSTREAM tRNA:M2:48Bb INTRON Roc2	TF binding site BDTNP1_TFBS_dl
X	14635549	X_14635549_DEL [dm3] X_14741516_DEL [dm6]	GTG	G	1.618e^-4	0.868	INTRON NetB	TF binding site BDTNP1_TFBS_twi
2R	12224235	2R_12224235_SNP [dm3] 2R_16336730_SNP [dm6]	C	A	1.655e^-4	0.868	UTR_5_PRIME Hmgs UPSTREAM Hmgs & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2R	12224282	2R_12224282_SNP [dm3] 2R_16336777_SNP [dm6]	A	G	1.655e^-4	0.868	START_GAINED Hmgs UTR_5_PRIME Hmgs UPSTREAM Vha44	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2R	12224309	2R_12224309_SNP [dm3] 2R_16336804_SNP [dm6]	T	A	1.655e^-4	0.868	UTR_5_PRIME Hmgs UPSTREAM Vha44	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2R	14099070	2R_14099070_SNP [dm3] 2R_18211565_SNP [dm6]	T	C	1.655e^-4	0.868	DOWNSTREAM CR45147 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2R	14099073	2R_14099073_SNP [dm3] 2R_18211568_SNP [dm6]	T	C	1.655e^-4	0.868	DOWNSTREAM CR45147 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2R	14099084	2R_14099084_SNP [dm3] 2R_18211579_SNP [dm6]	G	A	1.655e^-4	0.868	DOWNSTREAM CR45147 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2R	14099134	2R_14099134_SNP [dm3] 2R_18211629_SNP [dm6]	T	A	1.655e^-4	0.868	DOWNSTREAM CR45147 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens
2R	14099185	2R_14099185_SNP [dm3] 2R_18211680_SNP [dm6]	T	C	1.655e^-4	0.868	DOWNSTREAM CR45147 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens
2R	17643407	2R_17643407_DEL [dm3] 2R_21755902_DEL [dm6]	GGTTCTTCAGCAATAATT...	G	1.655e^-4	0.868	INTERGENIC
2R	4729629	2R_4729629_SNP [dm3] 2R_8842124_SNP [dm6]	G	A	1.655e^-4	0.868	INTRON sns
3L	14173946	3L_14173946_SNP [dm3] 3L_14180846_SNP [dm6]	T	A	1.655e^-4	0.868	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens
3L	2503881	3L_2503881_SNP [dm3] 3L_2503881_SNP [dm6]	G	T	1.655e^-4	0.868	UPSTREAM CG16758 EXON CR45425	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	2665843	3L_2665843_SNP [dm3] 3L_2665843_SNP [dm6]	T	C	1.655e^-4	0.868	INTRON Fife	TF binding site mE1_TFBS_chinmo
3R	10497912	3R_10497912_SNP [dm3] 3R_14672190_SNP [dm6]	C	T	1.655e^-4	0.868	INTRON Meltrin	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	14880310	3R_14880310_SNP [dm3] 3R_19054588_SNP [dm6]	T	C	1.655e^-4	0.868	INTRON cdi	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	5045687	3R_5045687_SNP [dm3] 3R_9219965_SNP [dm6]	A	T	1.655e^-4	0.868	INTRON pum	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
X	10650403	X_10650403_SNP [dm3] X_10756370_SNP [dm6]	G	A	1.655e^-4	0.868	INTRON Rph	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	2840745	X_2840745_SNP [dm3] X_2946712_SNP [dm6]	T	A	1.655e^-4	0.868	UPSTREAM CG17959 DOWNSTREAM CG14423 INTRON kirre
X	2840760	X_2840760_SNP [dm3] X_2946727_SNP [dm6]	G	A	1.655e^-4	0.868	UPSTREAM CG17959 DOWNSTREAM CG14423 INTRON kirre
X	2840773	X_2840773_SNP [dm3] X_2946740_SNP [dm6]	G	T	1.655e^-4	0.868	UPSTREAM CG17959 DOWNSTREAM CG14423 INTRON kirre
X	2840774	X_2840774_SNP [dm3] X_2946741_SNP [dm6]	A	T	1.655e^-4	0.868	UPSTREAM CG17959 DOWNSTREAM CG14423 INTRON kirre
X	2840835	X_2840835_SNP [dm3] X_2946802_SNP [dm6]	G	T	1.655e^-4	0.868	UPSTREAM CG17959 DOWNSTREAM CG14423 INTRON kirre
X	8085559	X_8085559_SNP [dm3] X_8191526_SNP [dm6]	G	C	1.655e^-4	0.868	INTRON sdt	TF binding site mE1_TFBS_bab1
2L	1190156	2L_1190156_SNP [dm3] 2L_1190156_SNP [dm6]	C	T	1.759e^-4	0.868	INTRON CG5001
2R	12997538	2R_12997538_SNP [dm3] 2R_17110033_SNP [dm6]	C	T	1.794e^-4	0.868	SYNONYMOUS_CODING CG15611 INTRON CG15611
2R	16106217	2R_16106217_SNP [dm3] 2R_20218712_SNP [dm6]	G	T	1.794e^-4	0.868	INTERGENIC
2R	17261934	2R_17261934_SNP [dm3] 2R_21374429_SNP [dm6]	C	T	1.794e^-4	0.868	INTRON cv-2
2R	18397857	2R_18397857_SNP [dm3] 2R_22510352_SNP [dm6]	T	C	1.794e^-4	0.868	INTRON px	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
2R	18398296	2R_18398296_SNP [dm3] 2R_22510791_SNP [dm6]	A	G	1.794e^-4	0.868	INTRON px	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
2R	18398355	2R_18398355_SNP [dm3] 2R_22510850_SNP [dm6]	A	G	1.794e^-4	0.868	INTRON px	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
2L	19949613	2L_19949613_SNP [dm3] 2L_19949613_SNP [dm6]	G	A	1.851e^-4	0.868	INTRON sick	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
3R	13293542	3R_13293542_SNP [dm3] 3R_17467820_SNP [dm6]	G	A	1.863e^-4	0.868	INTERGENIC
2R	4955979	2R_4955979_SNP [dm3] 2R_9068474_SNP [dm6]	A	G	1.871e^-4	0.868	UPSTREAM ana INTRON ana
X	9207266	X_9207266_SNP [dm3] X_9313233_SNP [dm6]	C	T	1.913e^-4	0.868	INTERGENIC
X	14066751	X_14066751_SNP [dm3] X_14172718_SNP [dm6]	A	G	1.955e^-4	0.868	UPSTREAM betaNACtes1 INTERGENIC
3R	11310580	3R_11310580_SNP [dm3] 3R_15484858_SNP [dm6]	T	C	1.955e^-4	0.868	UTR_3_PRIME Trissin DOWNSTREAM Trissin & 1 other
3R	7466032	3R_7466032_SNP [dm3] 3R_11640310_SNP [dm6]	G	A	1.955e^-4	0.868	INTRON Csk	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA
2L	12260876	2L_12260876_DEL [dm3] 2L_12260876_DEL [dm6]	GCGCCA	G	1.958e^-4	0.868	INTRON aret
2R	4956227	2R_4956227_SNP [dm3] 2R_9068722_SNP [dm6]	T	A	1.966e^-4	0.868	UPSTREAM ana INTRON ana
2R	4956243	2R_4956243_SNP [dm3] 2R_9068738_SNP [dm6]	T	C	1.966e^-4	0.868	UPSTREAM ana INTRON ana
3R	11819017	3R_11819017_SNP [dm3] 3R_15993295_SNP [dm6]	G	A	1.966e^-4	0.868	UTR_5_PRIME srp UPSTREAM srp EXON CR44133	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	11819324	3R_11819324_SNP [dm3] 3R_15993602_SNP [dm6]	T	A	1.966e^-4	0.868	UPSTREAM srp INTRON srp EXON CR44133	TF binding site BDTNP1_TFBS_Med mE1_TFBS_Trl
3R	11819325	3R_11819325_DEL [dm3] 3R_15993603_DEL [dm6]	ATGTGTATTTAAT...	A	1.966e^-4	0.868	UPSTREAM srp INTRON srp EXON CR44133	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl
3R	11819341	3R_11819341_SNP [dm3] 3R_15993619_SNP [dm6]	T	A	1.966e^-4	0.868	UPSTREAM srp INTRON srp EXON CR44133	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl
3R	11819343	3R_11819343_DEL [dm3] 3R_15993621_DEL [dm6]	TTTA	T	1.966e^-4	0.868	UPSTREAM srp INTRON srp EXON CR44133	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl
3R	11819805	3R_11819805_SNP [dm3] 3R_15994083_SNP [dm6]	C	T	1.966e^-4	0.868	UPSTREAM srp DOWNSTREAM CR44133 INTRON srp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	12260870	2L_12260870_SNP [dm3] 2L_12260870_SNP [dm6]	T	G	2.026e^-4	0.868	INTRON aret
3R	14199351	3R_14199351_SNP [dm3] 3R_18373629_SNP [dm6]	T	A	2.065e^-4	0.868	UPSTREAM gl & 1 other DOWNSTREAM CG14310 INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	5301853	X_5301853_SNP [dm3] X_5407820_SNP [dm6]	C	T	2.105e^-4	0.868	SYNONYMOUS_CODING NAAT1	TF binding site BDTNP1_TFBS_twi
2L	16488589	2L_16488589_SNP [dm3] 2L_16488589_SNP [dm6]	A	G	2.199e^-4	0.868	SYNONYMOUS_CODING CG4580	TF binding site BDTNP1_TFBS_ftz mE1_TFBS_inv
2L	16488622	2L_16488622_SNP [dm3] 2L_16488622_SNP [dm6]	G	A	2.199e^-4	0.868	SYNONYMOUS_CODING CG4580	TF binding site BDTNP1_TFBS_ftz mE1_TFBS_inv
X	4244729	X_4244729_SNP [dm3] X_4350696_SNP [dm6]	T	G	2.229e^-4	0.868	INTRON norpA
2L	21813316	2L_21813316_DEL [dm3] 2L_21813316_DEL [dm6]	ATGATTAAGTCGATGAA...	A	2.229e^-4	0.868	INTERGENIC
2R	5849012	2R_5849012_SNP [dm3] 2R_9961507_SNP [dm6]	T	G	2.239e^-4	0.868	INTRON Pal1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	7812006	3R_7812006_SNP [dm3] 3R_11986284_SNP [dm6]	A	G	2.245e^-4	0.868	INTRON mfas	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	20310913	2L_20310913_DEL [dm3] 2L_20310913_DEL [dm6]	TT	T	2.264e^-4	0.868	UPSTREAM spir INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3R	10077936	3R_10077936_DEL [dm3] 3R_14252214_DEL [dm6]	ATT	GA	2.342e^-4	0.868	INTRON Aats-met
3R	10077940	3R_10077940_SNP [dm3] 3R_14252218_SNP [dm6]	A	T	2.342e^-4	0.868	INTRON Aats-met
3R	18799823	3R_18799823_SNP [dm3] 3R_22974101_SNP [dm6]	C	A	2.342e^-4	0.868	INTERGENIC
3R	18799828	3R_18799828_SNP [dm3] 3R_22974106_SNP [dm6]	T	C	2.342e^-4	0.868	INTERGENIC
3R	18799834	3R_18799834_SNP [dm3] 3R_22974112_SNP [dm6]	C	G	2.342e^-4	0.868	INTERGENIC
3R	18799851	3R_18799851_SNP [dm3] 3R_22974129_SNP [dm6]	A	G	2.342e^-4	0.868	INTERGENIC
X	16283217	X_16283217_SNP [dm3] X_16389184_SNP [dm6]	G	T	2.406e^-4	0.868	UTR_3_PRIME TH1 DOWNSTREAM CG4239
2L	13630308	2L_13630308_SNP [dm3] 2L_13630308_SNP [dm6]	C	G	2.417e^-4	0.868	INTRON kuz

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By genomic position
Variant impact
Gene name

MBeta phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results