DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=9.691e^-15)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_2L_t	7.3876	0.0249
In_2R_NS	5.9093	0.0521

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

3237 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	18823082	3R_18823082_SNP [dm3] 3R_22997360_SNP [dm6]	T	A	2.600e^-7	0.309	INTRON Nha2 EXON CR43454
2R	17160591	2R_17160591_SNP [dm3] 2R_21273086_SNP [dm6]	T	C	3.291e^-7	0.309	INTRON Rgk3
3L	906535	3L_906535_SNP [dm3] 3L_906535_SNP [dm6]	C	G	6.390e^-7	0.363	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	13508085	2R_13508085_SNP [dm3] 2R_17620580_SNP [dm6]	C	A	8.382e^-7	0.363	INTRON CG10936
3R	21052784	3R_21052784_SNP [dm3] 3R_25227062_SNP [dm6]	A	C	9.678e^-7	0.363	INTRON Cad96Cb
3R	21030869	3R_21030869_SNP [dm3] 3R_25205147_SNP [dm6]	C	T	1.834e^-6	0.403	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
3L	11154485	3L_11154485_SNP [dm3] 3L_11161385_SNP [dm6]	T	C	2.110e^-6	0.403	INTRON CG32082	TF binding site mE1_TFBS_cad
2R	10460322	2R_10460322_SNP [dm3] 2R_14572817_SNP [dm6]	C	A	2.186e^-6	0.403	SYNONYMOUS_CODING LamC INTRON ttv
3L	906154	3L_906154_SNP [dm3] 3L_906154_SNP [dm6]	T	A	2.920e^-6	0.403	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16428953	X_16428953_SNP [dm3] X_16534920_SNP [dm6]	T	A	2.930e^-6	0.403	INTERGENIC
3R	21051275	3R_21051275_SNP [dm3] 3R_25225553_SNP [dm6]	G	C	3.489e^-6	0.403	INTRON Cad96Cb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	16428952	X_16428952_SNP [dm3] X_16534919_SNP [dm6]	A	G	3.789e^-6	0.403	INTERGENIC
2R	10239438	2R_10239438_SNP [dm3] 2R_14351933_SNP [dm6]	A	G	3.877e^-6	0.403	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
2L	16864876	2L_16864876_SNP [dm3] 2L_16864876_SNP [dm6]	G	A	4.019e^-6	0.403	INTERGENIC
2L	16864878	2L_16864878_SNP [dm3] 2L_16864878_SNP [dm6]	A	T	4.019e^-6	0.403	INTERGENIC
3R	21051269	3R_21051269_SNP [dm3] 3R_25225547_SNP [dm6]	T	A	4.247e^-6	0.403	INTRON Cad96Cb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	7000131	2R_7000131_SNP [dm3] 2R_11112626_SNP [dm6]	G	A	4.675e^-6	0.403	INTRON luna
3R	24137495	3R_24137495_SNP [dm3] 3R_28311773_SNP [dm6]	G	A	4.766e^-6	0.403	INTERGENIC
2R	6975871	2R_6975871_SNP [dm3] 2R_11088366_SNP [dm6]	C	A	4.775e^-6	0.403	DOWNSTREAM CG43188 INTRON luna
2R	6999812	2R_6999812_SNP [dm3] 2R_11112307_SNP [dm6]	A	G	4.812e^-6	0.403	INTRON luna
2R	6994584	2R_6994584_INS [dm3] 2R_11107079_INS [dm6]	A	ACATAC	4.911e^-6	0.403	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	10239409	2R_10239409_INS [dm3] 2R_14351904_INS [dm6]	C	TT	4.928e^-6	0.403	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_kn
3L	12641483	3L_12641483_SNP [dm3] 3L_12648383_SNP [dm6]	G	C	4.946e^-6	0.403	DOWNSTREAM CR43431 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
2R	10239450	2R_10239450_SNP [dm3] 2R_14351945_SNP [dm6]	A	T	5.307e^-6	0.41	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
3R	12516603	3R_12516603_SNP [dm3] 3R_16690881_SNP [dm6]	A	C	5.522e^-6	0.41	INTRON Ubx	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	24051986	3R_24051986_SNP [dm3] 3R_28226264_SNP [dm6]	C	T	5.854e^-6	0.41	INTRON CG34354	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	6994275	2R_6994275_SNP [dm3] 2R_11106770_SNP [dm6]	G	T	5.905e^-6	0.41	UTR_5_PRIME luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	14415637	2R_14415637_SNP [dm3] 2R_18528132_SNP [dm6]	C	A	6.511e^-6	0.428	INTRON CG10924	TF binding site mE1_TFBS_Trl
2R	6372638	2R_6372638_SNP [dm3] 2R_10485133_SNP [dm6]	T	G	6.612e^-6	0.428	UTR_5_PRIME pre-lola-G INTRON lola & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	7535084	3L_7535084_SNP [dm3] 3L_7541984_SNP [dm6]	G	A	7.589e^-6	0.456	SYNONYMOUS_CODING CG32376 UPSTREAM CG32374	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	8948003	2R_8948003_SNP [dm3] 2R_13060498_SNP [dm6]	A	C	8.288e^-6	0.456	INTRON Drl-2
3R	21044653	3R_21044653_SNP [dm3] 3R_25218931_SNP [dm6]	G	A	8.293e^-6	0.456	UPSTREAM CG31103 DOWNSTREAM CG31106 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	10279408	2R_10279408_SNP [dm3] 2R_14391903_SNP [dm6]	G	A	8.353e^-6	0.456	SYNONYMOUS_CODING CG10104	TF binding site mE1_TFBS_cad
3R	27281756	3R_27281756_SNP [dm3] 3R_31456034_SNP [dm6]	G	T	8.403e^-6	0.456	INTRON Gprk2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	10982525	2R_10982525_SNP [dm3] 2R_15095020_SNP [dm6]	A	G	9.524e^-6	0.456	INTERGENIC
2R	7453346	2R_7453346_SNP [dm3] 2R_11565841_SNP [dm6]	C	A	9.899e^-6	0.456	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	10324405	2R_10324405_SNP [dm3] 2R_14436900_SNP [dm6]	A	T	1.024e^-5	0.456	INTRON Oaz	TF binding site mE1_TFBS_HSA
2R	13052695	2R_13052695_SNP [dm3] 2R_17165190_SNP [dm6]	C	T	1.062e^-5	0.456	UTR_3_PRIME CG10953 DOWNSTREAM CG10953
2R	10239431	2R_10239431_SNP [dm3] 2R_14351926_SNP [dm6]	T	A	1.068e^-5	0.456	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
3R	20323243	3R_20323243_SNP [dm3] 3R_24497521_SNP [dm6]	A	G	1.079e^-5	0.456	INTERGENIC
3R	5359690	3R_5359690_SNP [dm3] 3R_9533968_SNP [dm6]	T	A	1.102e^-5	0.456	UPSTREAM by INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	7535165	3L_7535165_SNP [dm3] 3L_7542065_SNP [dm6]	A	T	1.118e^-5	0.456	SYNONYMOUS_CODING CG32376 UPSTREAM CG32374	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	7007374	2R_7007374_SNP [dm3] 2R_11119869_SNP [dm6]	C	T	1.128e^-5	0.456	UTR_3_PRIME Cyp12d1-p DOWNSTREAM Cyp12d1-p
X	16428957	X_16428957_SNP [dm3] X_16534924_SNP [dm6]	T	C	1.138e^-5	0.456	INTERGENIC
2R	6786788	2R_6786788_SNP [dm3] 2R_10899283_SNP [dm6]	T	G	1.167e^-5	0.456	UPSTREAM Rpb5 INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	17749791	3R_17749791_DEL [dm3] 3R_21924069_DEL [dm6]	GCCATCGGGATTTCCTATGC...	G	1.180e^-5	0.456	INTERGENIC
3R	20198493	3R_20198493_SNP [dm3] 3R_24372771_SNP [dm6]	G	A	1.288e^-5	0.456	UPSTREAM CG17782 DOWNSTREAM CG17781 INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	21058267	3R_21058267_SNP [dm3] 3R_25232545_SNP [dm6]	T	A	1.295e^-5	0.456	UPSTREAM Cad96Cb INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2L	14054482	2L_14054482_SNP [dm3] 2L_14054482_SNP [dm6]	G	T	1.313e^-5	0.456	INTRON nAChRalpha5	TF binding site mE1_TFBS_Trl
3L	11116986	3L_11116986_SNP [dm3] 3L_11123886_SNP [dm6]	A	C	1.323e^-5	0.456	UPSTREAM Ufd1-like INTRON CG42575	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	1368773	2L_1368773_SNP [dm3] 2L_1368773_SNP [dm6]	A	G	1.341e^-5	0.456	NON_SYNONYMOUS_CODING CG14346	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	16428955	X_16428955_INS [dm3] X_16534922_INS [dm6]	T	TT	1.377e^-5	0.456	INTERGENIC
2L	16864890	2L_16864890_SNP [dm3] 2L_16864890_SNP [dm6]	A	C	1.387e^-5	0.456	INTERGENIC
2R	15567897	2R_15567897_DEL [dm3] 2R_19680392_DEL [dm6]	CC	C	1.412e^-5	0.456	DOWNSTREAM CG15127 INTERGENIC
2R	9337622	2R_9337622_SNP [dm3] 2R_13450117_SNP [dm6]	A	G	1.521e^-5	0.456	UPSTREAM cnn & 1 other INTRON cnn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2R	5314317	2R_5314317_SNP [dm3] 2R_9426812_SNP [dm6]	A	G	1.538e^-5	0.456	START_GAINED Pdk UTR_5_PRIME Pdk DOWNSTREAM prel	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	15905117	3R_15905117_SNP [dm3] 3R_20079395_SNP [dm6]	C	A	1.586e^-5	0.456	INTERGENIC
3R	20323291	3R_20323291_SNP [dm3] 3R_24497569_SNP [dm6]	G	C	1.667e^-5	0.456	INTERGENIC
3R	27281690	3R_27281690_SNP [dm3] 3R_31455968_SNP [dm6]	C	A	1.699e^-5	0.456	INTRON Gprk2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	3501990	2R_3501990_SNP [dm3] 2R_7614485_SNP [dm6]	A	C	1.700e^-5	0.456	UTR_5_PRIME CG1358 UPSTREAM CG1358 INTRON CG1358	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	4487682	2R_4487682_SNP [dm3] 2R_8600177_SNP [dm6]	G	A	1.703e^-5	0.456	UPSTREAM rgr & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Ubx
3L	4654308	3L_4654308_SNP [dm3] 3L_4654308_SNP [dm6]	T	A	1.727e^-5	0.456	INTRON axo
3L	3392065	3L_3392065_SNP [dm3] 3L_3392065_SNP [dm6]	T	A	1.732e^-5	0.456	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16512168	X_16512168_SNP [dm3] X_16618135_SNP [dm6]	T	G	1.763e^-5	0.456	INTRON CG9782	TF binding site BDTNP1_TFBS_dl
3R	24126993	3R_24126993_SNP [dm3] 3R_28301271_SNP [dm6]	C	T	1.779e^-5	0.456	INTERGENIC
3R	23663767	3R_23663767_SNP [dm3] 3R_27838045_SNP [dm6]	G	A	1.860e^-5	0.456	INTRON CG34353
3R	17320786	3R_17320786_SNP [dm3] 3R_21495064_SNP [dm6]	A	G	1.890e^-5	0.456	INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2R	9355278	2R_9355278_SNP [dm3] 2R_13467773_SNP [dm6]	G	T	1.920e^-5	0.456	INTRON arr
3R	21030993	3R_21030993_SNP [dm3] 3R_25205271_SNP [dm6]	G	C	1.936e^-5	0.456	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
2R	15483314	2R_15483314_SNP [dm3] 2R_19595809_SNP [dm6]	A	G	1.957e^-5	0.456	NON_SYNONYMOUS_CODING CG16716 INTRON sm	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	4618531	2L_4618531_SNP [dm3] 2L_4618531_SNP [dm6]	T	C	1.963e^-5	0.456	INTERGENIC	TF binding site mE1_TFBS_cad
2L	5134794	2L_5134794_SNP [dm3] 2L_5134794_SNP [dm6]	A	G	2.046e^-5	0.456	SYNONYMOUS_CODING Msp300 INTRON Msp300
3R	21042982	3R_21042982_SNP [dm3] 3R_25217260_SNP [dm6]	C	T	2.067e^-5	0.456	SYNONYMOUS_CODING CG31106
3R	21407591	3R_21407591_SNP [dm3] 3R_25581869_SNP [dm6]	C	A	2.073e^-5	0.456	SYNONYMOUS_CODING CG4582 INTRON msi	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9919370	3L_9919370_SNP [dm3] 3L_9926270_SNP [dm6]	C	A	2.076e^-5	0.456	INTRON CG34356	TF binding site mE1_TFBS_HSA
3R	19851364	3R_19851364_DEL [dm3] 3R_24025642_DEL [dm6]	CGAGGCCCGGCT...	C	2.100e^-5	0.456	INTRON KrT95D	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	19851346	3R_19851346_DEL [dm3] 3R_24025624_DEL [dm6]	GCACTAGAGAATTTGG...	G	2.119e^-5	0.456	INTRON KrT95D	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2R	5791258	2R_5791258_DEL [dm3] 2R_9903753_DEL [dm6]	TT	T	2.144e^-5	0.456	UPSTREAM CG1441 INTERGENIC	enhancer mE1_CBP_Enhancers
2R	6999236	2R_6999236_SNP [dm3] 2R_11111731_SNP [dm6]	A	T	2.163e^-5	0.456	INTRON luna	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	21038015	3R_21038015_SNP [dm3] 3R_25212293_SNP [dm6]	C	T	2.211e^-5	0.456	SYNONYMOUS_CODING CG13654	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	18352226	3R_18352226_DEL [dm3] 3R_22526504_DEL [dm6]	AC	A	2.235e^-5	0.456	INTRON CG5346
2R	6990160	2R_6990160_SNP [dm3] 2R_11102655_SNP [dm6]	T	C	2.291e^-5	0.456	INTRON luna	TF binding site mE1_TFBS_cnc mE1_TFBS_Trl
3R	21043101	3R_21043101_SNP [dm3] 3R_25217379_SNP [dm6]	T	C	2.302e^-5	0.456	INTRON CG31106
2R	7004530	2R_7004530_SNP [dm3] 2R_11117025_SNP [dm6]	T	A	2.339e^-5	0.456	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	5388500	3R_5388500_SNP [dm3] 3R_9562778_SNP [dm6]	T	C	2.343e^-5	0.456	INTRON CG9393	TF binding site mE1_TFBS_inv
3R	21053470	3R_21053470_SNP [dm3] 3R_25227748_SNP [dm6]	G	T	2.358e^-5	0.456	INTRON Cad96Cb
3L	903649	3L_903649_SNP [dm3] 3L_903649_SNP [dm6]	T	C	2.376e^-5	0.456	UTR_3_PRIME CG13905	TF binding site BDTNP1_TFBS_twi
X	11282660	X_11282660_SNP [dm3] X_11388627_SNP [dm6]	C	T	2.389e^-5	0.456	UTR_3_PRIME dlg1 INTRON dlg1	TF binding site BDTNP1_TFBS_dl
3R	5359125	3R_5359125_SNP [dm3] 3R_9533403_SNP [dm6]	G	C	2.393e^-5	0.456	UPSTREAM by INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_Trl
3L	7608634	3L_7608634_SNP [dm3] 3L_7615534_SNP [dm6]	T	A	2.430e^-5	0.456	INTRON CG33275
3R	26011109	3R_26011109_SNP [dm3] 3R_30185387_SNP [dm6]	A	C	2.462e^-5	0.456	UPSTREAM CR44262 DOWNSTREAM CG9747 INTERGENIC
X	11282211	X_11282211_DEL [dm3] X_11388178_DEL [dm6]	TA	T	2.525e^-5	0.456	UTR_3_PRIME dlg1 INTRON dlg1
2R	4301411	2R_4301411_SNP [dm3] 2R_8413906_SNP [dm6]	C	G	2.558e^-5	0.456	INTERGENIC
2R	10666546	2R_10666546_SNP [dm3] 2R_14779041_SNP [dm6]	T	C	2.586e^-5	0.456	INTRON kn
3R	20198653	3R_20198653_SNP [dm3] 3R_24372931_SNP [dm6]	T	G	2.614e^-5	0.456	UPSTREAM CG17782 DOWNSTREAM CG17781 INTERGENIC	TF binding site mE1_TFBS_chinmo
X	4699047	X_4699047_SNP [dm3] X_4805014_SNP [dm6]	T	A	2.642e^-5	0.456	UPSTREAM CG2861 DOWNSTREAM CR45516 INTERGENIC
3L	10888523	3L_10888523_SNP [dm3] 3L_10895423_SNP [dm6]	A	G	2.667e^-5	0.456	UTR_3_PRIME Aps UPSTREAM CR45171 DOWNSTREAM Aps & 1 other
2R	10239420	2R_10239420_SNP [dm3] 2R_14351915_SNP [dm6]	C	T	2.671e^-5	0.456	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
2L	5134713	2L_5134713_SNP [dm3] 2L_5134713_SNP [dm6]	C	T	2.684e^-5	0.456	SYNONYMOUS_CODING Msp300 INTRON Msp300
2R	11853944	2R_11853944_SNP [dm3] 2R_15966439_SNP [dm6]	G	A	2.685e^-5	0.456	SYNONYMOUS_CODING Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	3501991	2R_3501991_DEL [dm3] 2R_7614486_DEL [dm6]	GAG	G	2.687e^-5	0.456	UTR_5_PRIME CG1358 UPSTREAM CG1358 INTRON CG1358	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3501997	2R_3501997_SNP [dm3] 2R_7614492_SNP [dm6]	A	G	2.687e^-5	0.456	UTR_5_PRIME CG1358 UPSTREAM CG1358 INTRON CG1358	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	11118224	3L_11118224_SNP [dm3] 3L_11125124_SNP [dm6]	G	C	2.701e^-5	0.456	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	14996840	2R_14996840_SNP [dm3] 2R_19109335_SNP [dm6]	G	A	2.719e^-5	0.456	INTRON 5-HT1A
2R	6989960	2R_6989960_SNP [dm3] 2R_11102455_SNP [dm6]	T	C	2.721e^-5	0.456	INTRON luna	TF binding site mE1_TFBS_cnc
3L	4119298	3L_4119298_SNP [dm3] 3L_4119298_SNP [dm6]	C	A	2.742e^-5	0.456	INTRON Chd64
3L	22103943	3L_22103943_SNP [dm3] 3L_22110843_SNP [dm6]	T	G	2.761e^-5	0.456	INTERGENIC
3R	19747909	3R_19747909_SNP [dm3] 3R_23922187_SNP [dm6]	G	A	2.772e^-5	0.456	INTRON sba	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2R	9342493	2R_9342493_SNP [dm3] 2R_13454988_SNP [dm6]	G	A	2.774e^-5	0.456	SYNONYMOUS_CODING arr	TF binding site mE1_TFBS_sens
2R	5791262	2R_5791262_SNP [dm3] 2R_9903757_SNP [dm6]	C	T	2.799e^-5	0.456	UPSTREAM CG1441 INTERGENIC	enhancer mE1_CBP_Enhancers
2R	10324401	2R_10324401_SNP [dm3] 2R_14436896_SNP [dm6]	A	T	2.858e^-5	0.456	INTRON Oaz	TF binding site mE1_TFBS_HSA
2R	11851881	2R_11851881_SNP [dm3] 2R_15964376_SNP [dm6]	G	A	2.860e^-5	0.456	SYNONYMOUS_CODING Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	11853168	2R_11853168_SNP [dm3] 2R_15965663_SNP [dm6]	C	A	2.860e^-5	0.456	INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	13743805	2R_13743805_SNP [dm3] 2R_17856300_SNP [dm6]	C	A	2.873e^-5	0.456	UTR_5_PRIME olf186-F INTRON olf186-F	TF binding site mE1_TFBS_Trl
2R	7001156	2R_7001156_SNP [dm3] 2R_11113651_SNP [dm6]	A	T	2.944e^-5	0.456	INTRON luna
2R	5711122	2R_5711122_DEL [dm3] 2R_9823617_DEL [dm6]	GG	G	2.945e^-5	0.456	UPSTREAM CG30001 INTRON dila	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	21030862	3R_21030862_SNP [dm3] 3R_25205140_SNP [dm6]	C	A	2.970e^-5	0.456	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
3L	11266387	3L_11266387_SNP [dm3] 3L_11273287_SNP [dm6]	G	A	2.984e^-5	0.456	DOWNSTREAM CR44720 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	19483410	3R_19483410_SNP [dm3] 3R_23657688_SNP [dm6]	C	T	2.995e^-5	0.456	INTRON CG31145
2R	9355531	2R_9355531_SNP [dm3] 2R_13468026_SNP [dm6]	A	T	3.015e^-5	0.456	INTRON arr	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sbb
3R	20221497	3R_20221497_SNP [dm3] 3R_24395775_SNP [dm6]	G	A	3.042e^-5	0.456	UTR_3_PRIME nAChRalpha1
3R	21030859	3R_21030859_SNP [dm3] 3R_25205137_SNP [dm6]	T	A	3.052e^-5	0.456	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
3L	3392134	3L_3392134_SNP [dm3] 3L_3392134_SNP [dm6]	A	T	3.057e^-5	0.456	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	14631636	3R_14631636_SNP [dm3] 3R_18805914_SNP [dm6]	A	T	3.066e^-5	0.456	UTR_3_PRIME CG18208
X	16428031	X_16428031_DEL [dm3] X_16533998_DEL [dm6]	TC	T	3.069e^-5	0.456	UPSTREAM para INTERGENIC
2L	10757625	2L_10757625_SNP [dm3] 2L_10757625_SNP [dm6]	T	G	3.111e^-5	0.456	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	13613839	2L_13613839_SNP [dm3] 2L_13613839_SNP [dm6]	G	A	3.148e^-5	0.456	INTRON kuz
2L	5329886	2L_5329886_SNP [dm3] 2L_5329886_SNP [dm6]	C	T	3.179e^-5	0.456	UTR_5_PRIME TotM DOWNSTREAM fusl
3R	4127654	3R_4127654_SNP [dm3] 3R_8301932_SNP [dm6]	A	C	3.187e^-5	0.456	NON_SYNONYMOUS_CODING mRpL1 UPSTREAM CG9626 DOWNSTREAM nac	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens
X	12823306	X_12823306_SNP [dm3] X_12929273_SNP [dm6]	T	G	3.202e^-5	0.456	INTRON fne
2R	6994675	2R_6994675_SNP [dm3] 2R_11107170_SNP [dm6]	T	A	3.204e^-5	0.456	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl
3L	10775196	3L_10775196_SNP [dm3] 3L_10782096_SNP [dm6]	T	C	3.219e^-5	0.456	INTERGENIC
3L	7534517	3L_7534517_SNP [dm3] 3L_7541417_SNP [dm6]	G	A	3.236e^-5	0.456	UPSTREAM CG32374 DOWNSTREAM CG32376 INTERGENIC
2R	17125939	2R_17125939_SNP [dm3] 2R_21238434_SNP [dm6]	A	T	3.292e^-5	0.457	INTRON ASPP
X	22050567	X_22050567_SNP [dm3] X_22648731_SNP [dm6]	A	T	3.329e^-5	0.457	INTERGENIC
2L	4224178	2L_4224178_SNP [dm3] 2L_4224178_SNP [dm6]	T	A	3.332e^-5	0.457	DOWNSTREAM CG3702 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	20433924	3R_20433924_DEL [dm3] 3R_24608202_DEL [dm6]	CCGAAATGC	C	3.336e^-5	0.457	INTRON mld
2R	7029197	2R_7029197_SNP [dm3] 2R_11141692_SNP [dm6]	T	G	3.388e^-5	0.459	SYNONYMOUS_CODING CG13229
2L	5313057	2L_5313057_SNP [dm3] 2L_5313057_SNP [dm6]	C	T	3.409e^-5	0.459	SYNONYMOUS_CODING CG14024	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
X	8438852	X_8438852_SNP [dm3] X_8544819_SNP [dm6]	A	G	3.428e^-5	0.459	INTRON Nrg	TF binding site mE1_TFBS_cad
3L	7535003	3L_7535003_SNP [dm3] 3L_7541903_SNP [dm6]	G	A	3.553e^-5	0.46	SYNONYMOUS_CODING CG32376 UPSTREAM CG32374	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5329824	2L_5329824_SNP [dm3] 2L_5329824_SNP [dm6]	G	T	3.559e^-5	0.46	UPSTREAM CG14022 & 1 other DOWNSTREAM fusl INTERGENIC
3L	906418	3L_906418_SNP [dm3] 3L_906418_SNP [dm6]	A	G	3.603e^-5	0.46	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3392069	3L_3392069_SNP [dm3] 3L_3392069_SNP [dm6]	A	T	3.604e^-5	0.46	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2959865	2L_2959865_SNP [dm3] 2L_2959865_SNP [dm6]	G	A	3.621e^-5	0.46	INTRON Rbp9
3R	23537596	3R_23537596_SNP [dm3] 3R_27711874_SNP [dm6]	C	A	3.626e^-5	0.46	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	1811405	2R_1811405_SNP [dm3] 2R_5923900_SNP [dm6]	A	G	3.631e^-5	0.46	INTRON CG43366	transposable element FlyBase
2R	1811494	2R_1811494_SNP [dm3] 2R_5923989_SNP [dm6]	A	T	3.631e^-5	0.46	INTRON CG43366	transposable element FlyBase
3L	12641484	3L_12641484_SNP [dm3] 3L_12648384_SNP [dm6]	T	G	3.702e^-5	0.461	DOWNSTREAM CR43431 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
3R	21096931	3R_21096931_SNP [dm3] 3R_25271209_SNP [dm6]	C	T	3.742e^-5	0.461	SYNONYMOUS_CODING CG11889 UTR_5_PRIME CG11891 UPSTREAM CG11891
2R	18117876	2R_18117876_SNP [dm3] 2R_22230371_SNP [dm6]	A	C	3.779e^-5	0.461	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	3383210	3L_3383210_SNP [dm3] 3L_3383210_SNP [dm6]	T	G	3.804e^-5	0.461	INTERGENIC
2R	7005107	2R_7005107_SNP [dm3] 2R_11117602_SNP [dm6]	C	T	3.894e^-5	0.461	UTR_3_PRIME Cyp12d1-p
2R	11862203	2R_11862203_SNP [dm3] 2R_15974698_SNP [dm6]	C	T	3.979e^-5	0.461	NON_SYNONYMOUS_CODING Strn-Mlck
2L	11421836	2L_11421836_SNP [dm3] 2L_11421836_SNP [dm6]	T	C	3.998e^-5	0.461	INTERGENIC
2R	16918718	2R_16918718_SNP [dm3] 2R_21031213_SNP [dm6]	C	T	4.083e^-5	0.461	INTERGENIC
X	14441817	X_14441817_SNP [dm3] X_14547784_SNP [dm6]	A	G	4.126e^-5	0.461	INTERGENIC
2R	17179591	2R_17179591_SNP [dm3] 2R_21292086_SNP [dm6]	T	C	4.127e^-5	0.461	UTR_5_PRIME CG30392 DOWNSTREAM Sgf29	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA
3R	20674884	3R_20674884_SNP [dm3] 3R_24849162_SNP [dm6]	G	A	4.140e^-5	0.461	SYNONYMOUS_CODING Esp	TF binding site mE1_TFBS_sens
3L	16861877	3L_16861877_SNP [dm3] 3L_16868777_SNP [dm6]	G	C	4.154e^-5	0.461	INTRON Lmpt
3R	20285998	3R_20285998_SNP [dm3] 3R_24460276_SNP [dm6]	G	A	4.171e^-5	0.461	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	21030867	3R_21030867_SNP [dm3] 3R_25205145_SNP [dm6]	A	T	4.171e^-5	0.461	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
2R	4529251	2R_4529251_SNP [dm3] 2R_8641746_SNP [dm6]	T	G	4.217e^-5	0.461	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA
3R	17910797	3R_17910797_SNP [dm3] 3R_22085075_SNP [dm6]	T	C	4.234e^-5	0.461	DOWNSTREAM CG5778 INTERGENIC
3L	10775200	3L_10775200_SNP [dm3] 3L_10782100_SNP [dm6]	G	T	4.246e^-5	0.461	INTERGENIC
3R	14966966	3R_14966966_SNP [dm3] 3R_19141244_SNP [dm6]	T	A	4.250e^-5	0.461	UTR_3_PRIME Ppcs
2L	9059422	2L_9059422_SNP [dm3] 2L_9059422_SNP [dm6]	T	C	4.251e^-5	0.461	INTRON CG31708
2L	13606683	2L_13606683_SNP [dm3] 2L_13606683_SNP [dm6]	A	G	4.279e^-5	0.461	INTRON kuz
3L	10775210	3L_10775210_SNP [dm3] 3L_10782110_SNP [dm6]	A	C	4.289e^-5	0.461	INTERGENIC
2R	14771988	2R_14771988_SNP [dm3] 2R_18884483_SNP [dm6]	C	T	4.299e^-5	0.461	INTRON sano
3R	17627121	3R_17627121_DEL [dm3] 3R_21801399_DEL [dm6]	TCCTC	T	4.303e^-5	0.461	INTRON CASK
3R	26861326	3R_26861326_SNP [dm3] 3R_31035604_SNP [dm6]	G	C	4.309e^-5	0.461	NON_SYNONYMOUS_CODING CG33773
2R	13052217	2R_13052217_SNP [dm3] 2R_17164712_SNP [dm6]	T	C	4.320e^-5	0.461	DOWNSTREAM CG10953 INTERGENIC
3L	3384308	3L_3384308_SNP [dm3] 3L_3384308_SNP [dm6]	G	A	4.396e^-5	0.461	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	7007339	2R_7007339_SNP [dm3] 2R_11119834_SNP [dm6]	T	C	4.411e^-5	0.461	UTR_3_PRIME Cyp12d1-p DOWNSTREAM Cyp12d1-p
X	17061195	X_17061195_SNP [dm3] X_17167162_SNP [dm6]	C	T	4.415e^-5	0.461	INTRON baz
3R	5363353	3R_5363353_SNP [dm3] 3R_9537631_SNP [dm6]	T	C	4.446e^-5	0.461	UTR_3_PRIME mura DOWNSTREAM mura
3R	20933054	3R_20933054_SNP [dm3] 3R_25107332_SNP [dm6]	A	G	4.449e^-5	0.461	SYNONYMOUS_CODING CG34027
2R	11049033	2R_11049033_SNP [dm3] 2R_15161528_SNP [dm6]	C	A	4.457e^-5	0.461	INTRON igl
2L	11208849	2L_11208849_SNP [dm3] 2L_11208849_SNP [dm6]	G	C	4.463e^-5	0.461	INTERGENIC
2R	10632632	2R_10632632_SNP [dm3] 2R_14745127_SNP [dm6]	T	C	4.470e^-5	0.461	UPSTREAM Dro INTRON CG12858
3R	27173347	3R_27173347_SNP [dm3] 3R_31347625_SNP [dm6]	T	C	4.491e^-5	0.461	INTRON CG34347
2R	18117881	2R_18117881_MNP [dm3] 2R_22230376_MNP [dm6]	AGG	CAC	4.543e^-5	0.461	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	8328551	3L_8328551_SNP [dm3] 3L_8335451_SNP [dm6]	T	C	4.548e^-5	0.461	INTERGENIC
3R	15737567	3R_15737567_SNP [dm3] 3R_19911845_SNP [dm6]	A	G	4.600e^-5	0.461	NON_SYNONYMOUS_CODING RhoGAP92B
3R	17627119	3R_17627119_INS [dm3] 3R_21801397_INS [dm6]	A	AACA	4.615e^-5	0.461	INTRON CASK
2R	6994880	2R_6994880_SNP [dm3] 2R_11107375_SNP [dm6]	A	T	4.618e^-5	0.461	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	12647311	3L_12647311_SNP [dm3] 3L_12654211_SNP [dm6]	A	G	4.625e^-5	0.461	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	5342525	2L_5342525_SNP [dm3] 2L_5342525_SNP [dm6]	T	C	4.700e^-5	0.463	UPSTREAM CG12512 INTERGENIC
X	3823569	X_3823569_SNP [dm3] X_3929536_SNP [dm6]	A	G	4.711e^-5	0.463	INTRON CG42541
3R	19747906	3R_19747906_SNP [dm3] 3R_23922184_SNP [dm6]	T	G	4.795e^-5	0.463	INTRON sba	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3R	18461484	3R_18461484_INS [dm3] 3R_22635762_INS [dm6]	T	TGTTT	4.798e^-5	0.463	UTR_5_PRIME loco INTRON loco
3R	17730530	3R_17730530_SNP [dm3] 3R_21904808_SNP [dm6]	A	T	4.822e^-5	0.463	INTRON CG6678
2R	17098683	2R_17098683_SNP [dm3] 2R_21211178_SNP [dm6]	G	A	4.836e^-5	0.463	UTR_5_PRIME CG44245 DOWNSTREAM Glycogenin INTRON CG44245
X	15901879	X_15901879_SNP [dm3] X_16007846_SNP [dm6]	A	G	4.919e^-5	0.463	INTRON CG12698
2R	9337048	2R_9337048_SNP [dm3] 2R_13449543_SNP [dm6]	G	T	4.968e^-5	0.463	UPSTREAM cnn INTRON cnn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
X	9997863	X_9997863_SNP [dm3] X_10103830_SNP [dm6]	G	A	4.970e^-5	0.463	INTRON RhoU
3L	7535561	3L_7535561_SNP [dm3] 3L_7542461_SNP [dm6]	A	C	5.020e^-5	0.463	UPSTREAM CG32376 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26126977	3R_26126977_SNP [dm3] 3R_30301255_SNP [dm6]	A	G	5.090e^-5	0.463	INTRON hdc
X	7846613	X_7846613_DEL [dm3] X_7952580_DEL [dm6]	TT	T	5.090e^-5	0.463	UTR_3_PRIME CG42593
3R	27153377	3R_27153377_SNP [dm3] 3R_31327655_SNP [dm6]	C	G	5.103e^-5	0.463	INTRON CG34347	TF binding site mE1_TFBS_cad
3R	25314551	3R_25314551_SNP [dm3] 3R_29488829_SNP [dm6]	C	A	5.171e^-5	0.463	SYNONYMOUS_CODING CG2321 UPSTREAM CG2006	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	7710536	3R_7710536_SNP [dm3] 3R_11884814_SNP [dm6]	G	T	5.197e^-5	0.463	SYNONYMOUS_CODING mthl5 INTRON CG31368
3L	905186	3L_905186_SNP [dm3] 3L_905186_SNP [dm6]	T	A	5.289e^-5	0.463	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20333126	3R_20333126_SNP [dm3] 3R_24507404_SNP [dm6]	C	T	5.294e^-5	0.463	INTERGENIC
3R	6933037	3R_6933037_SNP [dm3] 3R_11107315_SNP [dm6]	G	C	5.294e^-5	0.463	INTERGENIC
2R	16954085	2R_16954085_SNP [dm3] 2R_21066580_SNP [dm6]	T	G	5.342e^-5	0.463	SYNONYMOUS_CODING Cht4	TF binding site mE1_TFBS_cad
2R	10308732	2R_10308732_SNP [dm3] 2R_14421227_SNP [dm6]	G	A	5.343e^-5	0.463	SYNONYMOUS_CODING CG17386	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
2R	9347691	2R_9347691_SNP [dm3] 2R_13460186_SNP [dm6]	T	C	5.371e^-5	0.463	INTRON arr	TF binding site mE1_TFBS_chinmo
3L	2862497	3L_2862497_SNP [dm3] 3L_2862497_SNP [dm6]	T	C	5.449e^-5	0.463	INTRON CG43444
3L	905161	3L_905161_SNP [dm3] 3L_905161_SNP [dm6]	A	T	5.459e^-5	0.463	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4812519	2L_4812519_SNP [dm3] 2L_4812519_SNP [dm6]	T	G	5.467e^-5	0.463	UPSTREAM CR45297 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_zfh1
X	5442715	X_5442715_SNP [dm3] X_5548682_SNP [dm6]	A	G	5.528e^-5	0.463	INTRON Vsx2	TF binding site BDTNP1_TFBS_dl
3R	12078301	3R_12078301_SNP [dm3] 3R_16252579_SNP [dm6]	C	G	5.563e^-5	0.463	INTRON tara	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2L	12698825	2L_12698825_SNP [dm3] 2L_12698825_SNP [dm6]	A	T	5.601e^-5	0.463	UTR_3_PRIME PICK1 DOWNSTREAM CG17036	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	25464726	3R_25464726_SNP [dm3] 3R_29639004_SNP [dm6]	A	T	5.641e^-5	0.463	UTR_3_PRIME Dop1R2 INTRON Dop1R2
3R	20010279	3R_20010279_SNP [dm3] 3R_24184557_SNP [dm6]	C	G	5.675e^-5	0.463	DOWNSTREAM CG13606 INTERGENIC
3R	20027334	3R_20027334_SNP [dm3] 3R_24201612_SNP [dm6]	G	A	5.675e^-5	0.463	UPSTREAM twin INTRON twin
3L	16862935	3L_16862935_SNP [dm3] 3L_16869835_SNP [dm6]	C	A	5.703e^-5	0.463	INTRON Lmpt
X	17891056	X_17891056_INS [dm3] X_17997023_INS [dm6]	A	AA	5.710e^-5	0.463	INTRON Sh
2L	5313109	2L_5313109_DEL [dm3] 2L_5313109_DEL [dm6]	AA	A	5.719e^-5	0.463	INTRON CG14024	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	4030831	3L_4030831_SNP [dm3] 3L_4030831_SNP [dm6]	T	C	5.723e^-5	0.463	SYNONYMOUS_CODING Gr64c UTR_3_PRIME Gr64b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	7051200	2R_7051200_SNP [dm3] 2R_11163695_SNP [dm6]	C	A	5.739e^-5	0.463	INTRON shn & 1 other
2R	14996936	2R_14996936_SNP [dm3] 2R_19109431_SNP [dm6]	G	A	5.758e^-5	0.463	INTRON 5-HT1A
X	17061567	X_17061567_SNP [dm3] X_17167534_SNP [dm6]	C	T	5.845e^-5	0.463	INTRON baz	transposable element FlyBase
3R	21037907	3R_21037907_SNP [dm3] 3R_25212185_SNP [dm6]	A	G	5.852e^-5	0.463	SYNONYMOUS_CODING CG13654	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	20281330	3R_20281330_SNP [dm3] 3R_24455608_SNP [dm6]	G	A	5.909e^-5	0.463	INTRON nAChRalpha1
2R	4483724	2R_4483724_SNP [dm3] 2R_8596219_SNP [dm6]	T	C	5.923e^-5	0.463	DOWNSTREAM CG8735 INTERGENIC
2L	13616236	2L_13616236_SNP [dm3] 2L_13616236_SNP [dm6]	A	G	5.934e^-5	0.463	INTRON kuz
X	4700889	X_4700889_SNP [dm3] X_4806856_SNP [dm6]	T	A	5.969e^-5	0.463	INTERGENIC
2R	7004543	2R_7004543_SNP [dm3] 2R_11117038_SNP [dm6]	A	G	6.032e^-5	0.463	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	9995762	X_9995762_SNP [dm3] X_10101729_SNP [dm6]	A	C	6.043e^-5	0.463	INTRON RhoU
2L	3100339	2L_3100339_SNP [dm3] 2L_3100339_SNP [dm6]	T	G	6.046e^-5	0.463	INTRON toc
2L	6470904	2L_6470904_INS [dm3] 2L_6470904_INS [dm6]	A	ATAA	6.052e^-5	0.463	INTRON mmy
3R	21038009	3R_21038009_SNP [dm3] 3R_25212287_SNP [dm6]	G	T	6.071e^-5	0.463	SYNONYMOUS_CODING CG13654	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	14966901	3R_14966901_SNP [dm3] 3R_19141179_SNP [dm6]	G	A	6.086e^-5	0.463	UTR_3_PRIME Ppcs
2R	11845496	2R_11845496_SNP [dm3] 2R_15957991_SNP [dm6]	T	C	6.146e^-5	0.463	SPLICE_SITE_REGION Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	10632355	2R_10632355_SNP [dm3] 2R_14744850_SNP [dm6]	C	T	6.158e^-5	0.463	INTRON CG12858
2R	9347608	2R_9347608_SNP [dm3] 2R_13460103_SNP [dm6]	G	A	6.175e^-5	0.463	INTRON arr	TF binding site mE1_TFBS_chinmo
3R	20128806	3R_20128806_INS [dm3] 3R_24303084_INS [dm6]	T	TGAG	6.195e^-5	0.463	INTRON crb
2R	9515642	2R_9515642_SNP [dm3] 2R_13628137_SNP [dm6]	G	A	6.226e^-5	0.463	INTRON fas
2R	6985115	2R_6985115_INS [dm3] 2R_11097610_INS [dm6]	GG	CAA	6.258e^-5	0.463	INTRON luna
3L	905245	3L_905245_SNP [dm3] 3L_905245_SNP [dm6]	A	T	6.276e^-5	0.463	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20090492	3R_20090492_DEL [dm3] 3R_24264770_DEL [dm6]	GAG	G	6.282e^-5	0.463	UPSTREAM tRNA:CR31130 INTRON jar	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	20278811	3R_20278811_SNP [dm3] 3R_24453089_SNP [dm6]	A	G	6.339e^-5	0.463	INTRON nAChRalpha1
3L	11126757	3L_11126757_SNP [dm3] 3L_11133657_SNP [dm6]	T	C	6.455e^-5	0.463	INTRON CG42575	TF binding site mE1_TFBS_cad
3R	17855186	3R_17855186_SNP [dm3] 3R_22029464_SNP [dm6]	C	A	6.458e^-5	0.463	UTR_3_PRIME CG13409 DOWNSTREAM ND42
3L	12650082	3L_12650082_SNP [dm3] 3L_12656982_SNP [dm6]	T	G	6.519e^-5	0.463	INTERGENIC
2R	4483554	2R_4483554_SNP [dm3] 2R_8596049_SNP [dm6]	G	C	6.534e^-5	0.463	DOWNSTREAM CG8735 INTERGENIC
3L	908566	3L_908566_SNP [dm3] 3L_908566_SNP [dm6]	C	G	6.549e^-5	0.463	UPSTREAM nerfin-1 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA
3R	21062139	3R_21062139_SNP [dm3] 3R_25236417_SNP [dm6]	G	T	6.566e^-5	0.463	UPSTREAM CG10420 INTERGENIC
3R	4380779	3R_4380779_SNP [dm3] 3R_8555057_SNP [dm6]	T	A	6.574e^-5	0.463	INTERGENIC
2L	3262966	2L_3262966_SNP [dm3] 2L_3262966_SNP [dm6]	G	C	6.581e^-5	0.463	UPSTREAM CR45338 INTERGENIC
2L	12520722	2L_12520722_DEL [dm3] 2L_12520722_DEL [dm6]	AA	A	6.657e^-5	0.463	INTRON bun	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_run mE1_TFBS_Trl mE1_TFBS_ttk
2L	10892902	2L_10892902_SNP [dm3] 2L_10892902_SNP [dm6]	T	G	6.684e^-5	0.463	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_sens
3R	14966939	3R_14966939_SNP [dm3] 3R_19141217_SNP [dm6]	G	A	6.700e^-5	0.463	UTR_3_PRIME Ppcs
2L	4770760	2L_4770760_SNP [dm3] 2L_4770760_SNP [dm6]	A	T	6.706e^-5	0.463	INTRON CG15630
2R	13051943	2R_13051943_SNP [dm3] 2R_17164438_SNP [dm6]	G	T	6.715e^-5	0.463	DOWNSTREAM CG10953 INTERGENIC
2R	9348746	2R_9348746_SNP [dm3] 2R_13461241_SNP [dm6]	T	C	6.734e^-5	0.463	INTRON arr
3R	20212906	3R_20212906_SNP [dm3] 3R_24387184_SNP [dm6]	A	T	6.781e^-5	0.463	INTRON CG5768	TF binding site BDTNP1_TFBS_sna
3R	20281417	3R_20281417_SNP [dm3] 3R_24455695_SNP [dm6]	G	A	6.781e^-5	0.463	INTRON nAChRalpha1
3R	20286120	3R_20286120_SNP [dm3] 3R_24460398_SNP [dm6]	C	G	6.781e^-5	0.463	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	21898394	X_21898394_SNP [dm3] X_22496558_SNP [dm6]	T	C	6.846e^-5	0.463	INTRON l_1_G0196
3L	11264515	3L_11264515_SNP [dm3] 3L_11271415_SNP [dm6]	T	C	6.871e^-5	0.463	INTERGENIC
X	12866319	X_12866319_SNP [dm3] X_12972286_SNP [dm6]	T	C	6.875e^-5	0.463	NON_SYNONYMOUS_CODING CG15721 INTRON CR43636
X	11282380	X_11282380_SNP [dm3] X_11388347_SNP [dm6]	C	G	6.989e^-5	0.463	UTR_3_PRIME dlg1 INTRON dlg1
3L	11116322	3L_11116322_SNP [dm3] 3L_11123222_SNP [dm6]	T	A	6.997e^-5	0.463	UPSTREAM CG42575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	6994881	2R_6994881_INS [dm3] 2R_11107376_INS [dm6]	T	TTT	7.003e^-5	0.463	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	20010278	3R_20010278_SNP [dm3] 3R_24184556_SNP [dm6]	G	C	7.013e^-5	0.463	DOWNSTREAM CG13606 INTERGENIC
3R	20058753	3R_20058753_SNP [dm3] 3R_24233031_SNP [dm6]	C	T	7.013e^-5	0.463	INTRON mask	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo
X	13578512	X_13578512_DEL [dm3] X_13684479_DEL [dm6]	GCTTGACTAC	G	7.025e^-5	0.463	UTR_3_PRIME CG11158 & 1 other DOWNSTREAM CG9940
2R	10520804	2R_10520804_SNP [dm3] 2R_14633299_SNP [dm6]	C	G	7.078e^-5	0.463	INTERGENIC
3L	4003278	3L_4003278_SNP [dm3] 3L_4003278_SNP [dm6]	T	A	7.095e^-5	0.463	UPSTREAM CG14985 INTERGENIC
3L	9919378	3L_9919378_SNP [dm3] 3L_9926278_SNP [dm6]	C	T	7.098e^-5	0.463	INTRON CG34356	TF binding site mE1_TFBS_HSA
X	9995763	X_9995763_SNP [dm3] X_10101730_SNP [dm6]	G	A	7.106e^-5	0.463	INTRON RhoU
3R	20287570	3R_20287570_SNP [dm3] 3R_24461848_SNP [dm6]	T	A	7.206e^-5	0.463	INTERGENIC
2L	17264966	2L_17264966_SNP [dm3] 2L_17264966_SNP [dm6]	T	G	7.217e^-5	0.463	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_Kr
3L	3430346	3L_3430346_SNP [dm3] 3L_3430346_SNP [dm6]	C	G	7.234e^-5	0.463	INTRON eIF5B
X	11283558	X_11283558_SNP [dm3] X_11389525_SNP [dm6]	G	T	7.256e^-5	0.463	UPSTREAM dlg1 DOWNSTREAM dlg1 INTRON dlg1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	12022032	2R_12022032_INS [dm3] 2R_16134527_INS [dm6]	G	GG	7.266e^-5	0.463	INTRON spin	TF binding site mE1_TFBS_inv
2L	4810518	2L_4810518_SNP [dm3] 2L_4810518_SNP [dm6]	G	A	7.276e^-5	0.463	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_sens
2L	4810560	2L_4810560_DEL [dm3] 2L_4810560_DEL [dm6]	GA	G	7.276e^-5	0.463	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_sens
2L	4811076	2L_4811076_SNP [dm3] 2L_4811076_SNP [dm6]	G	A	7.276e^-5	0.463	DOWNSTREAM CR45297 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_en mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
2L	4812611	2L_4812611_SNP [dm3] 2L_4812611_SNP [dm6]	C	T	7.276e^-5	0.463	UPSTREAM CR45297 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA
3R	21111235	3R_21111235_DEL [dm3] 3R_25285513_DEL [dm6]	CC	T	7.323e^-5	0.463	UTR_5_PRIME CG31104 DOWNSTREAM CG31300
3R	4380778	3R_4380778_SNP [dm3] 3R_8555056_SNP [dm6]	T	A	7.395e^-5	0.463	INTERGENIC
3R	20051648	3R_20051648_SNP [dm3] 3R_24225926_SNP [dm6]	A	T	7.408e^-5	0.463	NON_SYNONYMOUS_CODING Spps	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo
3L	3382671	3L_3382671_SNP [dm3] 3L_3382671_SNP [dm6]	A	C	7.423e^-5	0.463	INTERGENIC
2R	9347607	2R_9347607_SNP [dm3] 2R_13460102_SNP [dm6]	A	T	7.458e^-5	0.463	INTRON arr	TF binding site mE1_TFBS_chinmo
2R	7717681	2R_7717681_SNP [dm3] 2R_11830176_SNP [dm6]	A	G	7.482e^-5	0.463	SYNONYMOUS_CODING Sobp
2L	5312589	2L_5312589_SNP [dm3] 2L_5312589_SNP [dm6]	T	C	7.490e^-5	0.463	SYNONYMOUS_CODING CG14024	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
X	3815530	X_3815530_SNP [dm3] X_3921497_SNP [dm6]	C	T	7.506e^-5	0.463	INTRON CG42541
2R	11798650	2R_11798650_SNP [dm3] 2R_15911145_SNP [dm6]	A	T	7.557e^-5	0.463	INTRON sli	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	25397981	3R_25397981_SNP [dm3] 3R_29572259_SNP [dm6]	C	T	7.561e^-5	0.463	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3R	20186150	3R_20186150_SNP [dm3] 3R_24360428_SNP [dm6]	G	A	7.569e^-5	0.463	UPSTREAM CG18528 DOWNSTREAM CG5762 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	4690860	2L_4690860_SNP [dm3] 2L_4690860_SNP [dm6]	C	T	7.570e^-5	0.463	UPSTREAM CG3251 INTERGENIC
2R	12295627	2R_12295627_SNP [dm3] 2R_16408122_SNP [dm6]	A	C	7.578e^-5	0.463	INTRON Sema-2b
2R	16916718	2R_16916718_SNP [dm3] 2R_21029213_SNP [dm6]	G	C	7.581e^-5	0.463	DOWNSTREAM CR45148 INTERGENIC
3R	14102654	3R_14102654_SNP [dm3] 3R_18276932_SNP [dm6]	A	T	7.589e^-5	0.463	INTRON eIF-1A
3R	20014875	3R_20014875_SNP [dm3] 3R_24189153_SNP [dm6]	G	T	7.653e^-5	0.463	SYNONYMOUS_CODING jnj UPSTREAM CG5515	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	5310869	2L_5310869_SNP [dm3] 2L_5310869_SNP [dm6]	G	A	7.705e^-5	0.463	UTR_3_PRIME vri DOWNSTREAM CG14024 & 1 other
3L	12247193	3L_12247193_SNP [dm3] 3L_12254093_SNP [dm6]	C	T	7.735e^-5	0.463	INTRON app
3R	20128810	3R_20128810_DEL [dm3] 3R_24303088_DEL [dm6]	TTGCGGCCA	T	7.751e^-5	0.463	INTRON crb
2R	6372516	2R_6372516_SNP [dm3] 2R_10485011_SNP [dm6]	T	G	7.800e^-5	0.463	UTR_5_PRIME pre-lola-G INTRON lola & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2L	4814275	2L_4814275_SNP [dm3] 2L_4814275_SNP [dm6]	T	G	7.815e^-5	0.463	INTRON CG15629
3L	12098869	3L_12098869_SNP [dm3] 3L_12105769_SNP [dm6]	G	A	7.815e^-5	0.463	INTERGENIC
3R	20159493	3R_20159493_SNP [dm3] 3R_24333771_SNP [dm6]	C	T	7.823e^-5	0.463	SYNONYMOUS_CODING Dis3 UPSTREAM CG5728	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	20258038	3R_20258038_SNP [dm3] 3R_24432316_SNP [dm6]	C	T	7.823e^-5	0.463	INTRON nAChRalpha1
3R	20134500	3R_20134500_SNP [dm3] 3R_24308778_SNP [dm6]	A	G	7.828e^-5	0.463	INTRON crb	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3R	20206540	3R_20206540_SNP [dm3] 3R_24380818_SNP [dm6]	T	C	7.828e^-5	0.463	INTERGENIC
3R	19845243	3R_19845243_SNP [dm3] 3R_24019521_SNP [dm6]	T	A	7.865e^-5	0.463	INTRON KrT95D
2L	13643859	2L_13643859_SNP [dm3] 2L_13643859_SNP [dm6]	G	C	7.883e^-5	0.463	DOWNSTREAM CR44726 INTERGENIC
2R	6999263	2R_6999263_SNP [dm3] 2R_11111758_SNP [dm6]	T	G	7.916e^-5	0.463	INTRON luna	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sbb
3L	11900566	3L_11900566_SNP [dm3] 3L_11907466_SNP [dm6]	T	A	7.935e^-5	0.463	INTRON CG44837
3L	11876837	3L_11876837_SNP [dm3] 3L_11883737_SNP [dm6]	C	G	7.951e^-5	0.463	DOWNSTREAM CCDC151 INTRON CG44837
2L	1499428	2L_1499428_SNP [dm3] 2L_1499428_SNP [dm6]	C	A	7.963e^-5	0.463	DOWNSTREAM CG31661 INTRON CG18131
X	16623339	X_16623339_SNP [dm3] X_16729306_SNP [dm6]	C	T	8.012e^-5	0.463	NON_SYNONYMOUS_CODING CG9634
2L	8051125	2L_8051125_SNP [dm3] 2L_8051125_SNP [dm6]	T	C	8.035e^-5	0.463	SYNONYMOUS_CODING CG7466	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	24051707	3R_24051707_SNP [dm3] 3R_28225985_SNP [dm6]	A	T	8.038e^-5	0.463	INTRON CG34354	TF binding site mE1_TFBS_HSA
2L	7955054	2L_7955054_SNP [dm3] 2L_7955054_SNP [dm6]	G	A	8.058e^-5	0.463	INTRON Snoo
2L	19648247	2L_19648247_SNP [dm3] 2L_19648247_SNP [dm6]	T	C	8.090e^-5	0.463	INTRON Lar
2L	1083501	2L_1083501_SNP [dm3] 2L_1083501_SNP [dm6]	C	A	8.091e^-5	0.463	UTR_3_PRIME Atg4a & 1 other DOWNSTREAM Atg4a
3L	17881907	3L_17881907_SNP [dm3] 3L_17888807_SNP [dm6]	G	A	8.102e^-5	0.463	INTRON CG7402
2R	7039004	2R_7039004_SNP [dm3] 2R_11151499_SNP [dm6]	C	T	8.140e^-5	0.463	INTRON CG13229
2R	17089871	2R_17089871_SNP [dm3] 2R_21202366_SNP [dm6]	A	T	8.157e^-5	0.463	UPSTREAM Glycogenin INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2R	12245781	2R_12245781_SNP [dm3] 2R_16358276_SNP [dm6]	T	A	8.159e^-5	0.463	DOWNSTREAM CR45322 EXON CR43416
3R	26743900	3R_26743900_DEL [dm3] 3R_30918178_DEL [dm6]	TGCACGACT	T	8.273e^-5	0.463	INTRON Ptx1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	14439368	X_14439368_SNP [dm3] X_14545335_SNP [dm6]	C	T	8.302e^-5	0.463	INTERGENIC
3R	18454953	3R_18454953_SNP [dm3] 3R_22629231_SNP [dm6]	G	A	8.328e^-5	0.463	UPSTREAM CR43474 INTRON loco EXON CR43475	regulatory region REDfly_CRMs
3R	26126911	3R_26126911_SNP [dm3] 3R_30301189_SNP [dm6]	A	G	8.332e^-5	0.463	INTRON hdc
X	3817210	X_3817210_SNP [dm3] X_3923177_SNP [dm6]	A	G	8.338e^-5	0.463	INTRON CG42541
3L	7868429	3L_7868429_SNP [dm3] 3L_7875329_SNP [dm6]	C	T	8.344e^-5	0.463	INTRON CG32365	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
2L	490895	2L_490895_SNP [dm3] 2L_490895_SNP [dm6]	C	G	8.353e^-5	0.463	UTR_5_PRIME ush INTRON ush	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Trl
X	14042755	X_14042755_INS [dm3] X_14148722_INS [dm6]	A	AGAA	8.370e^-5	0.463	INTERGENIC
2R	6978694	2R_6978694_SNP [dm3] 2R_11091189_SNP [dm6]	G	C	8.395e^-5	0.463	INTRON luna	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3599648	3L_3599648_SNP [dm3] 3L_3599648_SNP [dm6]	T	A	8.404e^-5	0.463	INTRON Eip63E
X	17337243	X_17337243_SNP [dm3] X_17443210_SNP [dm6]	T	A	8.406e^-5	0.463	INTRON CG12994
3L	905775	3L_905775_SNP [dm3] 3L_905775_SNP [dm6]	T	C	8.411e^-5	0.463	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9316378	2L_9316378_SNP [dm3] 2L_9316378_SNP [dm6]	A	T	8.458e^-5	0.463	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	6468710	2R_6468710_DEL [dm3] 2R_10581205_DEL [dm6]	TT	T	8.483e^-5	0.463	INTRON psq	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2L	11322231	2L_11322231_SNP [dm3] 2L_11322231_SNP [dm6]	T	A	8.504e^-5	0.463	INTERGENIC
3R	26339125	3R_26339125_SNP [dm3] 3R_30513403_SNP [dm6]	A	T	8.508e^-5	0.463	SYNONYMOUS_CODING CG31524	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	16916506	2R_16916506_SNP [dm3] 2R_21029001_SNP [dm6]	C	G	8.509e^-5	0.463	DOWNSTREAM CR45148 INTERGENIC
2R	16916522	2R_16916522_SNP [dm3] 2R_21029017_SNP [dm6]	G	C	8.509e^-5	0.463	DOWNSTREAM CR45148 INTERGENIC
3L	15077587	3L_15077587_SNP [dm3] 3L_15084487_SNP [dm6]	C	T	8.521e^-5	0.463	SYNONYMOUS_CODING cp309 UTR_5_PRIME cp309	TF binding site mE1_TFBS_cad
2L	3177782	2L_3177782_SNP [dm3] 2L_3177782_SNP [dm6]	G	A	8.569e^-5	0.464	INTRON CG34393	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	19615842	3R_19615842_SNP [dm3] 3R_23790120_SNP [dm6]	A	C	8.584e^-5	0.464	INTRON mbc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	18742433	X_18742433_SNP [dm3] X_18848400_SNP [dm6]	C	T	8.616e^-5	0.464	UTR_5_PRIME CG7280 UPSTREAM CG34422 INTRON CG34422
3R	14773844	3R_14773844_SNP [dm3] 3R_18948122_SNP [dm6]	G	T	8.720e^-5	0.464	INTRON CG42613
3R	20197937	3R_20197937_SNP [dm3] 3R_24372215_SNP [dm6]	T	C	8.721e^-5	0.464	INTRON CG17782	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	20204307	3R_20204307_SNP [dm3] 3R_24378585_SNP [dm6]	A	T	8.734e^-5	0.464	DOWNSTREAM CG33342 INTERGENIC
3R	8609509	3R_8609509_SNP [dm3] 3R_12783787_SNP [dm6]	C	A	8.771e^-5	0.464	UPSTREAM beat-Vc INTERGENIC
2L	5250856	2L_5250856_INS [dm3] 2L_5250856_INS [dm6]	C	TATATT	8.810e^-5	0.464	INTRON tkv
3R	23218652	3R_23218652_SNP [dm3] 3R_27392930_SNP [dm6]	A	G	8.903e^-5	0.464	INTRON side
2R	13829690	2R_13829690_SNP [dm3] 2R_17942185_SNP [dm6]	A	T	8.903e^-5	0.464	INTERGENIC
3R	19894457	3R_19894457_SNP [dm3] 3R_24068735_SNP [dm6]	C	T	8.910e^-5	0.464	INTRON 4EHP
3R	20403963	3R_20403963_DEL [dm3] 3R_24578241_DEL [dm6]	TA	T	8.912e^-5	0.464	UPSTREAM CG13624 INTRON CG13624
2R	9352161	2R_9352161_SNP [dm3] 2R_13464656_SNP [dm6]	G	T	8.960e^-5	0.464	INTRON arr	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	6824083	3L_6824083_SNP [dm3] 3L_6830983_SNP [dm6]	G	T	8.961e^-5	0.464	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
X	11281124	X_11281124_SNP [dm3] X_11387091_SNP [dm6]	T	A	8.982e^-5	0.464	INTRON dlg1
2L	10093105	2L_10093105_SNP [dm3] 2L_10093105_SNP [dm6]	G	A	9.025e^-5	0.464	UPSTREAM CG13133 & 1 other INTRON CG44153
3R	21087264	3R_21087264_SNP [dm3] 3R_25261542_SNP [dm6]	C	T	9.049e^-5	0.464	SPLICE_SITE_REGION CG10425 DOWNSTREAM CG11857 INTRON CG10425
2L	6472395	2L_6472395_SNP [dm3] 2L_6472395_SNP [dm6]	C	T	9.141e^-5	0.464	UPSTREAM mmy INTRON mmy	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	19615410	3R_19615410_SNP [dm3] 3R_23789688_SNP [dm6]	G	C	9.149e^-5	0.464	INTRON mbc	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	9999687	X_9999687_SNP [dm3] X_10105654_SNP [dm6]	C	G	9.196e^-5	0.464	INTRON RhoU	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
2L	10101095	2L_10101095_SNP [dm3] 2L_10101095_SNP [dm6]	A	G	9.200e^-5	0.464	INTRON CG34109 & 1 other
3L	10459209	3L_10459209_SNP [dm3] 3L_10466109_SNP [dm6]	A	G	9.204e^-5	0.464	UPSTREAM S-Lap3 INTRON S-Lap3
3R	21053272	3R_21053272_SNP [dm3] 3R_25227550_SNP [dm6]	T	A	9.208e^-5	0.464	INTRON Cad96Cb
3R	13590994	3R_13590994_SNP [dm3] 3R_17765272_SNP [dm6]	G	C	9.255e^-5	0.464	INTERGENIC
3L	9919388	3L_9919388_SNP [dm3] 3L_9926288_SNP [dm6]	T	C	9.334e^-5	0.464	INTRON CG34356	TF binding site mE1_TFBS_HSA
X	4699045	X_4699045_SNP [dm3] X_4805012_SNP [dm6]	A	G	9.355e^-5	0.464	UPSTREAM CG2861 DOWNSTREAM CR45516 INTERGENIC
3R	20562777	3R_20562777_SNP [dm3] 3R_24737055_SNP [dm6]	C	G	9.389e^-5	0.464	INTRON tok
3R	16225893	3R_16225893_SNP [dm3] 3R_20400171_SNP [dm6]	T	A	9.401e^-5	0.464	DOWNSTREAM Gfrl INTRON Gfrl	TF binding site mE1_TFBS_cad
2L	5329937	2L_5329937_SNP [dm3] 2L_5329937_SNP [dm6]	A	C	9.556e^-5	0.464	DOWNSTREAM fusl INTRON TotM
3R	19028925	3R_19028925_SNP [dm3] 3R_23203203_SNP [dm6]	G	A	9.595e^-5	0.464	SYNONYMOUS_CODING fzo INTRON cnc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	8343313	X_8343313_SNP [dm3] X_8449280_SNP [dm6]	T	A	9.597e^-5	0.464	INTRON org-1
2R	10242728	2R_10242728_SNP [dm3] 2R_14355223_SNP [dm6]	G	A	9.607e^-5	0.464	SYNONYMOUS_CODING CG8613 DOWNSTREAM CG8617
2R	6995301	2R_6995301_SNP [dm3] 2R_11107796_SNP [dm6]	C	A	9.676e^-5	0.464	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	4700066	X_4700066_SNP [dm3] X_4806033_SNP [dm6]	G	A	9.721e^-5	0.464	UPSTREAM CR45516 INTERGENIC
3R	24959077	3R_24959077_SNP [dm3] 3R_29133355_SNP [dm6]	C	T	9.760e^-5	0.464	SYNONYMOUS_CODING Vha100-1 INTRON Vha100-1
2R	2737192	2R_2737192_SNP [dm3] 2R_6849687_SNP [dm6]	A	G	9.764e^-5	0.464	INTERGENIC
2R	12532114	2R_12532114_INS [dm3] 2R_16644609_INS [dm6]	A	AGCTTAAAAAAACGA...	9.788e^-5	0.464	INTRON gprs	TF binding site BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
3R	16064247	3R_16064247_DEL [dm3] 3R_20238525_DEL [dm6]	CT	C	9.794e^-5	0.464	INTRON Nlg4
3R	20268982	3R_20268982_SNP [dm3] 3R_24443260_SNP [dm6]	C	A	9.802e^-5	0.464	INTRON nAChRalpha1
3R	26564587	3R_26564587_SNP [dm3] 3R_30738865_SNP [dm6]	A	C	9.811e^-5	0.464	INTERGENIC
3R	4380675	3R_4380675_SNP [dm3] 3R_8554953_SNP [dm6]	A	T	9.819e^-5	0.464	DOWNSTREAM Or85d INTERGENIC
X	17062201	X_17062201_SNP [dm3] X_17168168_SNP [dm6]	T	A	9.826e^-5	0.464	INTRON baz
X	19742853	X_19742853_DEL [dm3] X_19848820_DEL [dm6]	CC	C	9.861e^-5	0.464	UPSTREAM pico INTRON pico	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	7535710	3L_7535710_SNP [dm3] 3L_7542610_SNP [dm6]	T	A	9.874e^-5	0.464	UPSTREAM CG32376 INTERGENIC	TF binding site mE1_TFBS_HSA
2R	15265366	2R_15265366_SNP [dm3] 2R_19377861_SNP [dm6]	G	T	9.885e^-5	0.464	SYNONYMOUS_CODING CG10062	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	23665578	3R_23665578_SNP [dm3] 3R_27839856_SNP [dm6]	G	T	9.889e^-5	0.464	INTRON CG34353
X	21919499	X_21919499_SNP [dm3] X_22517663_SNP [dm6]	T	A	9.946e^-5	0.464	INTRON CG17600
2R	9822589	2R_9822589_SNP [dm3] 2R_13935084_SNP [dm6]	T	A	9.954e^-5	0.464	INTRON shot	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	20243198	3R_20243198_SNP [dm3] 3R_24417476_SNP [dm6]	A	G	9.957e^-5	0.464	INTRON nAChRalpha1
4	151585	4_151585_SNP [dm3] 4_130959_SNP [dm6]	A	T	9.971e^-5	0.464	INTERGENIC	transposable element FlyBase
3L	12081246	3L_12081246_SNP [dm3] 3L_12088146_SNP [dm6]	T	C	9.974e^-5	0.464	UPSTREAM CG17154 INTERGENIC
3R	20659778	3R_20659778_SNP [dm3] 3R_24834056_SNP [dm6]	C	T	1.002e^-4	0.464	UTR_5_PRIME sosie	TF binding site BDTNP1_TFBS_twi
2R	18109860	2R_18109860_SNP [dm3] 2R_22222355_SNP [dm6]	G	A	1.003e^-4	0.464	SYNONYMOUS_CODING Oatp58Db	TF binding site mE1_TFBS_sens
3L	3384730	3L_3384730_SNP [dm3] 3L_3384730_SNP [dm6]	G	A	1.009e^-4	0.464	INTERGENIC
2R	11845732	2R_11845732_SNP [dm3] 2R_15958227_SNP [dm6]	T	C	1.009e^-4	0.464	SYNONYMOUS_CODING Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	26339129	3R_26339129_SNP [dm3] 3R_30513407_SNP [dm6]	G	T	1.009e^-4	0.464	NON_SYNONYMOUS_CODING CG31524	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	8585107	2R_8585107_SNP [dm3] 2R_12697602_SNP [dm6]	A	C	1.010e^-4	0.464	INTERGENIC
2R	4496307	2R_4496307_SNP [dm3] 2R_8608802_SNP [dm6]	T	A	1.011e^-4	0.464	INTRON rgr
X	5442720	X_5442720_SNP [dm3] X_5548687_SNP [dm6]	A	G	1.012e^-4	0.464	INTRON Vsx2	TF binding site BDTNP1_TFBS_dl
2L	6770728	2L_6770728_SNP [dm3] 2L_6770728_SNP [dm6]	T	C	1.019e^-4	0.464	INTRON CG11321
X	17337246	X_17337246_DEL [dm3] X_17443213_DEL [dm6]	ATAAGTCCTGCATTTCAAAT...	G	1.019e^-4	0.464	INTRON CG12994
3R	19483347	3R_19483347_SNP [dm3] 3R_23657625_SNP [dm6]	C	T	1.022e^-4	0.464	INTRON CG31145
3R	20639247	3R_20639247_DEL [dm3] 3R_24813525_DEL [dm6]	GG	G	1.026e^-4	0.464	UPSTREAM CG34150 INTRON CG5807	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	20688784	3R_20688784_SNP [dm3] 3R_24863062_SNP [dm6]	C	A	1.026e^-4	0.464	NON_SYNONYMOUS_CODING CG7016 UPSTREAM CG13640	TF binding site mE1_TFBS_chinmo
2R	7272896	2R_7272896_SNP [dm3] 2R_11385391_SNP [dm6]	T	G	1.028e^-4	0.464	SYNONYMOUS_CODING sprt	TF binding site mE1_TFBS_cad mE1_TFBS_sens
4	424882	4_424882_SNP [dm3] 4_404256_SNP [dm6]	A	T	1.032e^-4	0.464	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	17179590	2R_17179590_SNP [dm3] 2R_21292085_SNP [dm6]	C	T	1.032e^-4	0.464	UTR_5_PRIME CG30392 DOWNSTREAM Sgf29	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA
2R	17179593	2R_17179593_SNP [dm3] 2R_21292088_SNP [dm6]	A	T	1.032e^-4	0.464	UTR_5_PRIME CG30392 DOWNSTREAM Sgf29	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA
2R	9850591	2R_9850591_SNP [dm3] 2R_13963086_SNP [dm6]	T	A	1.033e^-4	0.464	INTRON Cp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2R	17727907	2R_17727907_SNP [dm3] 2R_21840402_SNP [dm6]	C	T	1.033e^-4	0.464	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	1499631	2L_1499631_SNP [dm3] 2L_1499631_SNP [dm6]	A	G	1.036e^-4	0.464	NON_SYNONYMOUS_CODING CG18131 INTRON CG18131
2L	11067333	2L_11067333_SNP [dm3] 2L_11067333_SNP [dm6]	C	T	1.037e^-4	0.464	UPSTREAM Samuel INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	4263751	3R_4263751_SNP [dm3] 3R_8438029_SNP [dm6]	C	G	1.038e^-4	0.464	INTRON CG45263
X	21922384	X_21922384_SNP [dm3] X_22520548_SNP [dm6]	A	G	1.039e^-4	0.464	INTRON CG17600
3L	14618631	3L_14618631_SNP [dm3] 3L_14625531_SNP [dm6]	T	A	1.040e^-4	0.464	INTRON CG9628	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_HSA
3L	1978884	3L_1978884_SNP [dm3] 3L_1978884_SNP [dm6]	G	A	1.045e^-4	0.465	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9946221	3L_9946221_SNP [dm3] 3L_9953121_SNP [dm6]	A	T	1.051e^-4	0.467	INTRON CG34356
2L	885644	2L_885644_SNP [dm3] 2L_885644_SNP [dm6]	C	A	1.054e^-4	0.467	UPSTREAM CG15824 INTERGENIC
3R	5369256	3R_5369256_SNP [dm3] 3R_9543534_SNP [dm6]	A	G	1.057e^-4	0.467	INTRON mura	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	4301557	2R_4301557_SNP [dm3] 2R_8414052_SNP [dm6]	A	G	1.058e^-4	0.467	INTERGENIC
2R	10240908	2R_10240908_SNP [dm3] 2R_14353403_SNP [dm6]	G	A	1.063e^-4	0.468	NON_SYNONYMOUS_CODING CG8613
3L	2862097	3L_2862097_SNP [dm3] 3L_2862097_SNP [dm6]	G	A	1.065e^-4	0.468	INTRON CG43444
3L	7535288	3L_7535288_SNP [dm3] 3L_7542188_SNP [dm6]	A	C	1.072e^-4	0.468	SYNONYMOUS_CODING CG32376	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10240193	2R_10240193_SNP [dm3] 2R_14352688_SNP [dm6]	G	C	1.072e^-4	0.468	SYNONYMOUS_CODING CG8613 DOWNSTREAM Shroom	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
X	21922484	X_21922484_SNP [dm3] X_22520648_SNP [dm6]	C	G	1.073e^-4	0.468	INTRON CG17600
X	12998284	X_12998284_SNP [dm3] X_13104251_SNP [dm6]	A	G	1.075e^-4	0.468	INTRON CG43313
2R	16307298	2R_16307298_SNP [dm3] 2R_20419793_SNP [dm6]	A	G	1.084e^-4	0.469	INTERGENIC
2L	22375935	2L_22375935_DEL [dm3] 2L_22375935_DEL [dm6]	CTAGACCCAGCTATTTCAAC...	C	1.094e^-4	0.469	INTERGENIC	transposable element FlyBase
2L	9336243	2L_9336243_SNP [dm3] 2L_9336243_SNP [dm6]	A	C	1.094e^-4	0.469	INTRON Eaat1
3L	3392077	3L_3392077_SNP [dm3] 3L_3392077_SNP [dm6]	T	A	1.095e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20638303	3R_20638303_SNP [dm3] 3R_24812581_SNP [dm6]	C	T	1.098e^-4	0.469	INTRON CG5807	TF binding site BDTNP1_TFBS_twi mE1_TFBS_zfh1
3R	20283473	3R_20283473_SNP [dm3] 3R_24457751_SNP [dm6]	T	A	1.099e^-4	0.469	UPSTREAM nAChRalpha1 INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
X	17891135	X_17891135_SNP [dm3] X_17997102_SNP [dm6]	G	A	1.101e^-4	0.469	INTRON Sh
2L	807926	2L_807926_SNP [dm3] 2L_807926_SNP [dm6]	A	G	1.101e^-4	0.469	INTERGENIC
2L	3964765	2L_3964765_SNP [dm3] 2L_3964765_SNP [dm6]	C	T	1.102e^-4	0.469	INTRON fred
2R	10239480	2R_10239480_SNP [dm3] 2R_14351975_SNP [dm6]	A	G	1.106e^-4	0.469	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
3L	8142495	3L_8142495_SNP [dm3] 3L_8149395_SNP [dm6]	C	T	1.106e^-4	0.469	INTRON CG13676
2L	12254718	2L_12254718_SNP [dm3] 2L_12254718_SNP [dm6]	G	A	1.113e^-4	0.469	INTRON aret
2R	11862702	2R_11862702_SNP [dm3] 2R_15975197_SNP [dm6]	A	T	1.114e^-4	0.469	SYNONYMOUS_CODING Strn-Mlck
2L	10110752	2L_10110752_SNP [dm3] 2L_10110752_SNP [dm6]	A	G	1.118e^-4	0.469	INTRON CG44153 & 1 other
3R	19735022	3R_19735022_SNP [dm3] 3R_23909300_SNP [dm6]	C	T	1.131e^-4	0.469	INTRON sba
X	8291549	X_8291549_SNP [dm3] X_8397516_SNP [dm6]	A	C	1.137e^-4	0.469	NON_SYNONYMOUS_CODING CG15345
X	13399187	X_13399187_SNP [dm3] X_13505154_SNP [dm6]	T	C	1.138e^-4	0.469	INTRON Neto	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	17179594	2R_17179594_SNP [dm3] 2R_21292089_SNP [dm6]	T	A	1.140e^-4	0.469	UTR_5_PRIME CG30392 DOWNSTREAM Sgf29	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA
3R	26859402	3R_26859402_SNP [dm3] 3R_31033680_SNP [dm6]	C	T	1.142e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	2732666	3R_2732666_SNP [dm3] 3R_6906944_SNP [dm6]	A	T	1.145e^-4	0.469	DOWNSTREAM Antp INTRON Antp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26340925	3R_26340925_SNP [dm3] 3R_30515203_SNP [dm6]	G	T	1.147e^-4	0.469	NON_SYNONYMOUS_CODING CG9698 UPSTREAM CG31524	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	8857422	3L_8857422_SNP [dm3] 3L_8864322_SNP [dm6]	T	C	1.152e^-4	0.469	INTRON dally
2R	6995302	2R_6995302_SNP [dm3] 2R_11107797_SNP [dm6]	T	A	1.152e^-4	0.469	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	14756330	2R_14756330_SNP [dm3] 2R_18868825_SNP [dm6]	T	C	1.163e^-4	0.469	UPSTREAM CG43109 DOWNSTREAM DptB INTERGENIC
3L	8204935	3L_8204935_SNP [dm3] 3L_8211835_SNP [dm6]	G	A	1.168e^-4	0.469	UPSTREAM CG8006 INTERGENIC
X	8925819	X_8925819_SNP [dm3] X_9031786_SNP [dm6]	T	C	1.169e^-4	0.469	INTRON CR43836 & 1 other
3R	21741221	3R_21741221_SNP [dm3] 3R_25915499_SNP [dm6]	T	G	1.172e^-4	0.469	SYNONYMOUS_CODING CG42235 DOWNSTREAM CG42235 INTRON CG42235
3L	11266075	3L_11266075_SNP [dm3] 3L_11272975_SNP [dm6]	A	G	1.174e^-4	0.469	DOWNSTREAM CR44720 INTERGENIC
2R	6748839	2R_6748839_SNP [dm3] 2R_10861334_SNP [dm6]	C	T	1.180e^-4	0.469	UTR_5_PRIME CG30015 INTRON CG30015	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	15402479	2L_15402479_SNP [dm3] 2L_15402479_SNP [dm6]	A	G	1.186e^-4	0.469	INTERGENIC
2R	11795380	2R_11795380_SNP [dm3] 2R_15907875_SNP [dm6]	A	C	1.194e^-4	0.469	INTRON sli
3L	7535717	3L_7535717_SNP [dm3] 3L_7542617_SNP [dm6]	C	T	1.194e^-4	0.469	UPSTREAM CG32376 INTERGENIC	TF binding site mE1_TFBS_HSA
3R	20446540	3R_20446540_SNP [dm3] 3R_24620818_SNP [dm6]	C	T	1.200e^-4	0.469	SYNONYMOUS_CODING mld	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9450758	2R_9450758_SNP [dm3] 2R_13563253_SNP [dm6]	C	T	1.205e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
3R	26179411	3R_26179411_SNP [dm3] 3R_30353689_SNP [dm6]	G	C	1.209e^-4	0.469	INTRON hdc
2R	14416059	2R_14416059_SNP [dm3] 2R_18528554_SNP [dm6]	C	A	1.209e^-4	0.469	INTRON CG10924	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	25464910	3R_25464910_SNP [dm3] 3R_29639188_SNP [dm6]	G	C	1.210e^-4	0.469	INTRON Dop1R2
3R	19041861	3R_19041861_SNP [dm3] 3R_23216139_SNP [dm6]	T	C	1.210e^-4	0.469	INTRON cnc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
3R	19483323	3R_19483323_SNP [dm3] 3R_23657601_SNP [dm6]	T	C	1.211e^-4	0.469	INTRON CG31145
3R	21071436	3R_21071436_SNP [dm3] 3R_25245714_SNP [dm6]	A	T	1.219e^-4	0.469	UPSTREAM bam DOWNSTREAM RpS27 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	27190457	3R_27190457_SNP [dm3] 3R_31364735_SNP [dm6]	A	T	1.221e^-4	0.469	INTRON CG34347
2L	2842356	2L_2842356_SNP [dm3] 2L_2842356_SNP [dm6]	T	A	1.221e^-4	0.469	NON_SYNONYMOUS_CODING CG2975 DOWNSTREAM CG18558
3L	1563864	3L_1563864_SNP [dm3] 3L_1563864_SNP [dm6]	A	G	1.223e^-4	0.469	INTRON CG7879	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3R	26342631	3R_26342631_SNP [dm3] 3R_30516909_SNP [dm6]	A	G	1.226e^-4	0.469	NON_SYNONYMOUS_CODING CG9698 DOWNSTREAM jdp
2L	1499642	2L_1499642_SNP [dm3] 2L_1499642_SNP [dm6]	G	A	1.226e^-4	0.469	SYNONYMOUS_CODING CG18131 INTRON CG18131
2L	885738	2L_885738_SNP [dm3] 2L_885738_SNP [dm6]	G	C	1.226e^-4	0.469	UPSTREAM CG15824 INTERGENIC
X	17081368	X_17081368_SNP [dm3] X_17187335_SNP [dm6]	T	A	1.227e^-4	0.469	INTRON baz
2L	10893894	2L_10893894_SNP [dm3] 2L_10893894_SNP [dm6]	C	T	1.227e^-4	0.469	DOWNSTREAM CR44491 INTERGENIC
3L	3384612	3L_3384612_SNP [dm3] 3L_3384612_SNP [dm6]	C	A	1.228e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	5342566	2L_5342566_SNP [dm3] 2L_5342566_SNP [dm6]	A	T	1.229e^-4	0.469	UPSTREAM CG12512 INTERGENIC
2R	10724961	2R_10724961_SNP [dm3] 2R_14837456_SNP [dm6]	C	T	1.230e^-4	0.469	INTERGENIC
3R	21111023	3R_21111023_SNP [dm3] 3R_25285301_SNP [dm6]	G	A	1.230e^-4	0.469	UPSTREAM CG31104 DOWNSTREAM CG31300 INTERGENIC
2R	13701038	2R_13701038_SNP [dm3] 2R_17813533_SNP [dm6]	T	G	1.231e^-4	0.469	UPSTREAM grh INTRON grh	TF binding site BDTNP1_TFBS_dl
2L	5313146	2L_5313146_SNP [dm3] 2L_5313146_SNP [dm6]	C	T	1.235e^-4	0.469	INTRON CG14024	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	19615475	3R_19615475_SNP [dm3] 3R_23789753_SNP [dm6]	G	C	1.236e^-4	0.469	INTRON mbc	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	26353062	3R_26353062_SNP [dm3] 3R_30527340_SNP [dm6]	T	G	1.238e^-4	0.469	UPSTREAM jdp DOWNSTREAM CR45552 INTERGENIC
3R	21060754	3R_21060754_SNP [dm3] 3R_25235032_SNP [dm6]	A	G	1.245e^-4	0.469	SYNONYMOUS_CODING CG10420	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	486783	2L_486783_SNP [dm3] 2L_486783_SNP [dm6]	T	C	1.245e^-4	0.469	INTRON ush	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
X	12866290	X_12866290_SNP [dm3] X_12972257_SNP [dm6]	A	T	1.251e^-4	0.469	SYNONYMOUS_CODING CG15721 INTRON CR43636
2L	6571391	2L_6571391_SNP [dm3] 2L_6571391_SNP [dm6]	G	A	1.254e^-4	0.469	UTR_3_PRIME CG11319 DOWNSTREAM CG11319 INTRON CG11319
2R	9737868	2R_9737868_SNP [dm3] 2R_13850363_SNP [dm6]	C	T	1.255e^-4	0.469	NON_SYNONYMOUS_CODING CG30485 DOWNSTREAM CG30484
2R	13746234	2R_13746234_SNP [dm3] 2R_17858729_SNP [dm6]	A	C	1.257e^-4	0.469	INTRON olf186-F
3L	11117578	3L_11117578_SNP [dm3] 3L_11124478_SNP [dm6]	T	G	1.259e^-4	0.469	INTRON CG42575	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl
2R	6995229	2R_6995229_SNP [dm3] 2R_11107724_SNP [dm6]	A	T	1.260e^-4	0.469	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	11208830	2L_11208830_SNP [dm3] 2L_11208830_SNP [dm6]	A	G	1.261e^-4	0.469	INTERGENIC
3R	23671807	3R_23671807_SNP [dm3] 3R_27846085_SNP [dm6]	A	G	1.264e^-4	0.469	NON_SYNONYMOUS_CODING Or98a DOWNSTREAM Or98P INTRON CG34353
3R	21053184	3R_21053184_SNP [dm3] 3R_25227462_SNP [dm6]	A	C	1.265e^-4	0.469	INTRON Cad96Cb
3R	21053311	3R_21053311_SNP [dm3] 3R_25227589_SNP [dm6]	G	A	1.265e^-4	0.469	INTRON Cad96Cb
3R	2793938	3R_2793938_SNP [dm3] 3R_6968216_SNP [dm6]	C	A	1.265e^-4	0.469	INTRON Antp
2R	10240640	2R_10240640_SNP [dm3] 2R_14353135_SNP [dm6]	G	C	1.267e^-4	0.469	SYNONYMOUS_CODING CG8613
2L	4875896	2L_4875896_SNP [dm3] 2L_4875896_SNP [dm6]	G	A	1.268e^-4	0.469	UTR_3_PRIME pog DOWNSTREAM pog & 1 other
3R	23544975	3R_23544975_SNP [dm3] 3R_27719253_SNP [dm6]	A	G	1.271e^-4	0.469	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	6896079	2L_6896079_SNP [dm3] 2L_6896079_SNP [dm6]	G	C	1.274e^-4	0.469	UPSTREAM Nlg2 INTRON Nlg2	TF binding site mE1_TFBS_chinmo
X	11282419	X_11282419_SNP [dm3] X_11388386_SNP [dm6]	T	C	1.276e^-4	0.469	UTR_3_PRIME dlg1 INTRON dlg1
2L	6513585	2L_6513585_DEL [dm3] 2L_6513585_DEL [dm6]	GTG	G	1.282e^-4	0.469	INTRON CG31637	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	13591003	3R_13591003_SNP [dm3] 3R_17765281_SNP [dm6]	G	A	1.284e^-4	0.469	INTERGENIC
3R	26353298	3R_26353298_SNP [dm3] 3R_30527576_SNP [dm6]	C	A	1.286e^-4	0.469	UPSTREAM jdp DOWNSTREAM CR45552 INTERGENIC
3L	10543884	3L_10543884_SNP [dm3] 3L_10550784_SNP [dm6]	A	G	1.288e^-4	0.469	INTRON A2bp1
3R	18833843	3R_18833843_SNP [dm3] 3R_23008121_SNP [dm6]	A	G	1.291e^-4	0.469	SYNONYMOUS_CODING CG34375	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12534050	2L_12534050_SNP [dm3] 2L_12534050_SNP [dm6]	T	G	1.292e^-4	0.469	INTRON bun
2L	3964750	2L_3964750_SNP [dm3] 2L_3964750_SNP [dm6]	A	G	1.302e^-4	0.469	INTRON fred
2R	5214619	2R_5214619_DEL [dm3] 2R_9327114_DEL [dm6]	AGATGGTGTTG...	A	1.303e^-4	0.469	INTRON CG13954 & 1 other
3R	26397518	3R_26397518_SNP [dm3] 3R_30571796_SNP [dm6]	G	T	1.312e^-4	0.469	INTRON tmod
2R	12022123	2R_12022123_SNP [dm3] 2R_16134618_SNP [dm6]	G	A	1.316e^-4	0.469	INTRON spin
X	12520853	X_12520853_SNP [dm3] X_12626820_SNP [dm6]	C	T	1.317e^-4	0.469	UPSTREAM CG15728 INTRON CG15728	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8208138	3L_8208138_SNP [dm3] 3L_8215038_SNP [dm6]	T	C	1.319e^-4	0.469	UPSTREAM CG8012 INTERGENIC
2R	16918695	2R_16918695_SNP [dm3] 2R_21031190_SNP [dm6]	G	T	1.327e^-4	0.469	INTERGENIC
3R	25870753	3R_25870753_SNP [dm3] 3R_30045031_SNP [dm6]	T	C	1.331e^-4	0.469	DOWNSTREAM RpL32 & 1 other INTERGENIC
2L	10180760	2L_10180760_SNP [dm3] 2L_10180760_SNP [dm6]	A	T	1.341e^-4	0.469	UPSTREAM CG44153 INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA
3R	18814267	3R_18814267_SNP [dm3] 3R_22988545_SNP [dm6]	T	C	1.342e^-4	0.469	UPSTREAM Or94b DOWNSTREAM Or94a INTRON Nha2
2R	11848708	2R_11848708_SNP [dm3] 2R_15961203_SNP [dm6]	G	A	1.342e^-4	0.469	INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	17089819	2R_17089819_SNP [dm3] 2R_21202314_SNP [dm6]	A	G	1.348e^-4	0.469	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2R	7444274	2R_7444274_SNP [dm3] 2R_11556769_SNP [dm6]	A	C	1.350e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	21411508	3R_21411508_SNP [dm3] 3R_25585786_SNP [dm6]	A	T	1.352e^-4	0.469	INTRON msi
3L	9919417	3L_9919417_SNP [dm3] 3L_9926317_SNP [dm6]	G	A	1.353e^-4	0.469	INTRON CG34356	TF binding site mE1_TFBS_HSA
3R	20254170	3R_20254170_SNP [dm3] 3R_24428448_SNP [dm6]	C	T	1.355e^-4	0.469	INTRON nAChRalpha1
3R	18814257	3R_18814257_SNP [dm3] 3R_22988535_SNP [dm6]	G	A	1.356e^-4	0.469	UPSTREAM Or94b DOWNSTREAM Or94a INTRON Nha2
3R	21993989	3R_21993989_SNP [dm3] 3R_26168267_SNP [dm6]	G	T	1.359e^-4	0.469	INTERGENIC
2L	3263773	2L_3263773_SNP [dm3] 2L_3263773_SNP [dm6]	C	G	1.364e^-4	0.469	DOWNSTREAM CR45706 INTERGENIC
3R	20774714	3R_20774714_SNP [dm3] 3R_24948992_SNP [dm6]	G	C	1.369e^-4	0.469	INTRON CG13646
3L	11410481	3L_11410481_SNP [dm3] 3L_11417381_SNP [dm6]	T	A	1.370e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3R	20239631	3R_20239631_SNP [dm3] 3R_24413909_SNP [dm6]	G	A	1.374e^-4	0.469	INTRON nAChRalpha1
3R	13590998	3R_13590998_SNP [dm3] 3R_17765276_SNP [dm6]	T	A	1.375e^-4	0.469	INTERGENIC
3L	3384633	3L_3384633_SNP [dm3] 3L_3384633_SNP [dm6]	C	T	1.380e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	486616	2L_486616_SNP [dm3] 2L_486616_SNP [dm6]	C	T	1.380e^-4	0.469	INTRON ush	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3R	5962521	3R_5962521_SNP [dm3] 3R_10136799_SNP [dm6]	A	G	1.383e^-4	0.469	INTRON tws
3L	11876622	3L_11876622_DEL [dm3] 3L_11883522_DEL [dm6]	CACACCC	ATTT	1.385e^-4	0.469	INTRON CG44837
2L	6472396	2L_6472396_SNP [dm3] 2L_6472396_SNP [dm6]	T	A	1.385e^-4	0.469	UPSTREAM mmy INTRON mmy	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	6472400	2L_6472400_SNP [dm3] 2L_6472400_SNP [dm6]	T	A	1.385e^-4	0.469	UPSTREAM mmy INTRON mmy	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	6472403	2L_6472403_INS [dm3] 2L_6472403_INS [dm6]	T	TAGTATGT	1.385e^-4	0.469	UPSTREAM mmy INTRON mmy	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	5999170	3L_5999170_SNP [dm3] 3L_6006070_SNP [dm6]	C	T	1.393e^-4	0.469	INTRON PVRAP
2R	10241355	2R_10241355_SNP [dm3] 2R_14353850_SNP [dm6]	C	T	1.396e^-4	0.469	NON_SYNONYMOUS_CODING CG8613	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	1295373	2L_1295373_SNP [dm3] 2L_1295373_SNP [dm6]	A	T	1.398e^-4	0.469	UTR_3_PRIME robo3 DOWNSTREAM robo3
3L	10543912	3L_10543912_SNP [dm3] 3L_10550812_SNP [dm6]	G	A	1.398e^-4	0.469	INTRON A2bp1
3L	11116384	3L_11116384_SNP [dm3] 3L_11123284_SNP [dm6]	T	C	1.401e^-4	0.469	UPSTREAM CG42575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	11410476	3L_11410476_SNP [dm3] 3L_11417376_SNP [dm6]	A	C	1.407e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	2110826	2L_2110826_SNP [dm3] 2L_2110826_SNP [dm6]	T	C	1.407e^-4	0.469	UPSTREAM dpr3 INTERGENIC	TF binding site mE1_TFBS_bab1
2L	7036096	2L_7036096_SNP [dm3] 2L_7036096_SNP [dm6]	C	T	1.407e^-4	0.469	INTRON CG11266	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	881577	2L_881577_SNP [dm3] 2L_881577_SNP [dm6]	T	G	1.408e^-4	0.469	SYNONYMOUS_CODING CG15824	TF binding site mE1_TFBS_cad
2R	14720648	2R_14720648_SNP [dm3] 2R_18833143_SNP [dm6]	G	A	1.410e^-4	0.469	UTR_3_PRIME CG15082 DOWNSTREAM CG15098
3R	18378542	3R_18378542_SNP [dm3] 3R_22552820_SNP [dm6]	A	G	1.410e^-4	0.469	UPSTREAM bond & 1 other INTRON bond
3R	14836685	3R_14836685_INS [dm3] 3R_19010963_INS [dm6]	T	TT	1.411e^-4	0.469	INTRON gukh
3L	11314289	3L_11314289_SNP [dm3] 3L_11321189_SNP [dm6]	A	G	1.414e^-4	0.469	SYNONYMOUS_CODING CG6168
3R	25870734	3R_25870734_DEL [dm3] 3R_30045012_DEL [dm6]	GTAAA	G	1.414e^-4	0.469	DOWNSTREAM RpL32 & 1 other INTERGENIC
3R	27191114	3R_27191114_SNP [dm3] 3R_31365392_SNP [dm6]	A	G	1.417e^-4	0.469	INTRON CG34347
3R	21071548	3R_21071548_SNP [dm3] 3R_25245826_SNP [dm6]	A	G	1.418e^-4	0.469	UPSTREAM bam DOWNSTREAM RpS27 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	7535318	3L_7535318_SNP [dm3] 3L_7542218_SNP [dm6]	C	T	1.418e^-4	0.469	SYNONYMOUS_CODING CG32376	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	21898391	X_21898391_SNP [dm3] X_22496555_SNP [dm6]	C	A	1.421e^-4	0.469	SPLICE_SITE_REGION l_1_G0196 INTRON l_1_G0196
2L	9863449	2L_9863449_SNP [dm3] 2L_9863449_SNP [dm6]	C	T	1.422e^-4	0.469	INTRON nAChRalpha6	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
X	11282611	X_11282611_SNP [dm3] X_11388578_SNP [dm6]	C	T	1.422e^-4	0.469	UTR_3_PRIME dlg1 INTRON dlg1	TF binding site BDTNP1_TFBS_dl
X	17337346	X_17337346_SNP [dm3] X_17443313_SNP [dm6]	T	C	1.425e^-4	0.469	INTRON CG12994
3R	16881516	3R_16881516_SNP [dm3] 3R_21055794_SNP [dm6]	T	G	1.425e^-4	0.469	SYNONYMOUS_CODING Mvl
2L	2858507	2L_2858507_SNP [dm3] 2L_2858507_SNP [dm6]	G	C	1.425e^-4	0.469	INTRON CG2991	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	23576711	3R_23576711_SNP [dm3] 3R_27750989_SNP [dm6]	T	A	1.430e^-4	0.469	INTERGENIC	insulator Insulator_Class_II.mE01
2R	8902862	2R_8902862_SNP [dm3] 2R_13015357_SNP [dm6]	G	T	1.431e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	7615812	3L_7615812_SNP [dm3] 3L_7622712_SNP [dm6]	C	G	1.432e^-4	0.469	INTRON CG33275	TF binding site mE1_TFBS_HSA
3R	21032461	3R_21032461_SNP [dm3] 3R_25206739_SNP [dm6]	T	C	1.434e^-4	0.469	INTRON CG13654 & 1 other
2L	6472390	2L_6472390_INS [dm3] 2L_6472390_INS [dm6]	A	TT	1.436e^-4	0.469	UPSTREAM mmy INTRON mmy	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	21922406	X_21922406_SNP [dm3] X_22520570_SNP [dm6]	G	T	1.439e^-4	0.469	INTRON CG17600
3R	25870732	3R_25870732_INS [dm3] 3R_30045010_INS [dm6]	A	AA	1.444e^-4	0.469	DOWNSTREAM RpL32 & 1 other INTERGENIC
2R	17107110	2R_17107110_INS [dm3] 2R_21219605_INS [dm6]	A	AAAC	1.445e^-4	0.469	INTRON ASPP	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	5310871	2L_5310871_SNP [dm3] 2L_5310871_SNP [dm6]	A	G	1.446e^-4	0.469	UTR_3_PRIME vri DOWNSTREAM CG14024 & 1 other
3L	3384232	3L_3384232_SNP [dm3] 3L_3384232_SNP [dm6]	G	A	1.448e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	20420739	3R_20420739_SNP [dm3] 3R_24595017_SNP [dm6]	C	T	1.450e^-4	0.469	INTRON mld	TF binding site BDTNP1_TFBS_twi
3L	9995231	3L_9995231_SNP [dm3] 3L_10002131_SNP [dm6]	C	T	1.450e^-4	0.469	INTRON dpr6
2R	8907859	2R_8907859_SNP [dm3] 2R_13020354_SNP [dm6]	T	A	1.453e^-4	0.469	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D
X	12717545	X_12717545_SNP [dm3] X_12823512_SNP [dm6]	T	C	1.457e^-4	0.469	INTRON Pde9
X	21898392	X_21898392_SNP [dm3] X_22496556_SNP [dm6]	G	A	1.458e^-4	0.469	SPLICE_SITE_REGION l_1_G0196 INTRON l_1_G0196
3R	25953287	3R_25953287_SNP [dm3] 3R_30127565_SNP [dm6]	A	G	1.463e^-4	0.469	SYNONYMOUS_CODING Ppi1	TF binding site mE1_TFBS_chinmo
3R	13591000	3R_13591000_SNP [dm3] 3R_17765278_SNP [dm6]	A	G	1.464e^-4	0.469	INTERGENIC
2L	8172198	2L_8172198_SNP [dm3] 2L_8172198_SNP [dm6]	A	G	1.466e^-4	0.469	INTRON Piezo
2R	11798823	2R_11798823_SNP [dm3] 2R_15911318_SNP [dm6]	G	A	1.468e^-4	0.469	INTRON sli	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	13633248	2R_13633248_SNP [dm3] 2R_17745743_SNP [dm6]	T	C	1.468e^-4	0.469	NON_SYNONYMOUS_CODING Ir54a UTR_3_PRIME sub DOWNSTREAM sub
2L	13781632	2L_13781632_SNP [dm3] 2L_13781632_SNP [dm6]	G	T	1.470e^-4	0.469	SYNONYMOUS_CODING p38b DOWNSTREAM CG16890	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	13570941	2L_13570941_SNP [dm3] 2L_13570941_SNP [dm6]	A	G	1.472e^-4	0.469	INTRON kuz	TF binding site BDTNP1_TFBS_twi
3R	26176195	3R_26176195_SNP [dm3] 3R_30350473_SNP [dm6]	A	G	1.473e^-4	0.469	INTRON hdc
3R	26176196	3R_26176196_SNP [dm3] 3R_30350474_SNP [dm6]	T	C	1.473e^-4	0.469	INTRON hdc
3L	22970267	3L_22970267_SNP [dm3] 3L_22977167_SNP [dm6]	T	A	1.475e^-4	0.469	INTERGENIC
2R	16525372	2R_16525372_SNP [dm3] 2R_20637867_SNP [dm6]	T	C	1.478e^-4	0.469	SYNONYMOUS_CODING CG13436 INTRON rig	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	12866305	X_12866305_SNP [dm3] X_12972272_SNP [dm6]	A	C	1.478e^-4	0.469	SYNONYMOUS_CODING CG15721 INTRON CR43636
3R	18814288	3R_18814288_SNP [dm3] 3R_22988566_SNP [dm6]	T	A	1.484e^-4	0.47	UPSTREAM Or94b DOWNSTREAM Or94a INTRON Nha2
2R	17089852	2R_17089852_SNP [dm3] 2R_21202347_SNP [dm6]	A	T	1.496e^-4	0.471	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	3384976	3L_3384976_INS [dm3] 3L_3384976_INS [dm6]	A	AC	1.498e^-4	0.471	INTERGENIC
3R	26018388	3R_26018388_SNP [dm3] 3R_30192666_SNP [dm6]	T	C	1.498e^-4	0.471	INTERGENIC
3L	14352827	3L_14352827_SNP [dm3] 3L_14359727_SNP [dm6]	C	A	1.500e^-4	0.471	INTRON fz
3R	19995931	3R_19995931_SNP [dm3] 3R_24170209_SNP [dm6]	G	T	1.503e^-4	0.471	UPSTREAM CG5510 INTERGENIC
2R	10294461	2R_10294461_SNP [dm3] 2R_14406956_SNP [dm6]	T	A	1.505e^-4	0.471	INTERGENIC
3R	26338428	3R_26338428_SNP [dm3] 3R_30512706_SNP [dm6]	A	C	1.506e^-4	0.471	SYNONYMOUS_CODING CG31524 UPSTREAM PH4alphaNE2
3R	23665564	3R_23665564_SNP [dm3] 3R_27839842_SNP [dm6]	C	T	1.506e^-4	0.471	INTRON CG34353
2L	2936376	2L_2936376_SNP [dm3] 2L_2936376_SNP [dm6]	G	A	1.512e^-4	0.471	INTRON lilli
2R	9347719	2R_9347719_SNP [dm3] 2R_13460214_SNP [dm6]	G	T	1.517e^-4	0.471	INTRON arr	TF binding site mE1_TFBS_chinmo
2R	17727925	2R_17727925_SNP [dm3] 2R_21840420_SNP [dm6]	G	C	1.517e^-4	0.471	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	9352211	2R_9352211_SNP [dm3] 2R_13464706_SNP [dm6]	T	C	1.520e^-4	0.471	INTRON arr	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	11281125	X_11281125_SNP [dm3] X_11387092_SNP [dm6]	C	T	1.523e^-4	0.471	INTRON dlg1
3R	18327468	3R_18327468_DEL [dm3] 3R_22501746_DEL [dm6]	TC	T	1.528e^-4	0.471	INTRON Octbeta1R	regulatory region REDfly_CRMs
2R	16340008	2R_16340008_DEL [dm3] 2R_20452503_DEL [dm6]	GGA	G	1.530e^-4	0.471	INTRON CG12484
3R	22303952	3R_22303952_SNP [dm3] 3R_26478230_SNP [dm6]	T	A	1.534e^-4	0.471	INTRON plum	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	5289967	2L_5289967_SNP [dm3] 2L_5289967_SNP [dm6]	A	C	1.536e^-4	0.471	INTRON vri	TF binding site BDTNP1_TFBS_dl
3R	17646836	3R_17646836_SNP [dm3] 3R_21821114_SNP [dm6]	A	T	1.537e^-4	0.471	INTRON CASK
2L	7612811	2L_7612811_SNP [dm3] 2L_7612811_SNP [dm6]	C	T	1.537e^-4	0.471	INTRON CG6739
2R	9348929	2R_9348929_SNP [dm3] 2R_13461424_SNP [dm6]	A	T	1.537e^-4	0.471	INTRON arr
X	11280364	X_11280364_SNP [dm3] X_11386331_SNP [dm6]	G	T	1.541e^-4	0.471	INTRON dlg1
3L	7538634	3L_7538634_SNP [dm3] 3L_7545534_SNP [dm6]	C	T	1.542e^-4	0.471	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	20026811	3R_20026811_SNP [dm3] 3R_24201089_SNP [dm6]	T	C	1.551e^-4	0.471	UPSTREAM twin INTRON twin
2R	9342454	2R_9342454_SNP [dm3] 2R_13454949_SNP [dm6]	A	C	1.552e^-4	0.471	SYNONYMOUS_CODING arr	TF binding site mE1_TFBS_sens
3R	23585129	3R_23585129_SNP [dm3] 3R_27759407_SNP [dm6]	A	G	1.554e^-4	0.471	INTERGENIC	TF binding site mE1_TFBS_cad
2R	6372276	2R_6372276_SNP [dm3] 2R_10484771_SNP [dm6]	T	C	1.556e^-4	0.471	START_GAINED pre-lola-G UTR_5_PRIME pre-lola-G INTRON lola	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3L	13080624	3L_13080624_SNP [dm3] 3L_13087524_SNP [dm6]	A	G	1.557e^-4	0.471	UPSTREAM CG17300 EXON CR45749
3R	27340063	3R_27340063_SNP [dm3] 3R_31514341_SNP [dm6]	C	T	1.557e^-4	0.471	INTERGENIC
2L	16791882	2L_16791882_SNP [dm3] 2L_16791882_SNP [dm6]	T	A	1.562e^-4	0.472	INTRON CG17928	TF binding site mE1_TFBS_Trl
3L	3384722	3L_3384722_SNP [dm3] 3L_3384722_SNP [dm6]	G	T	1.572e^-4	0.473	INTERGENIC
2L	8568828	2L_8568828_SNP [dm3] 2L_8568828_SNP [dm6]	T	A	1.573e^-4	0.473	INTRON Sema-1a
2L	11208117	2L_11208117_SNP [dm3] 2L_11208117_SNP [dm6]	G	T	1.575e^-4	0.473	INTERGENIC
X	5538991	X_5538991_SNP [dm3] X_5644958_SNP [dm6]	T	A	1.579e^-4	0.474	INTRON CG42492
3R	11639338	3R_11639338_SNP [dm3] 3R_15813616_SNP [dm6]	G	A	1.585e^-4	0.474	INTRON alpha-Man-IIb
3R	21045568	3R_21045568_SNP [dm3] 3R_25219846_SNP [dm6]	C	T	1.587e^-4	0.474	SYNONYMOUS_CODING CG31103	TF binding site BDTNP1_TFBS_dl
3R	23665600	3R_23665600_SNP [dm3] 3R_27839878_SNP [dm6]	G	C	1.587e^-4	0.474	INTRON CG34353
2L	6065278	2L_6065278_SNP [dm3] 2L_6065278_SNP [dm6]	C	T	1.595e^-4	0.475	UPSTREAM CG9147 INTRON Fbw5	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	5289921	2L_5289921_SNP [dm3] 2L_5289921_SNP [dm6]	A	T	1.596e^-4	0.475	INTRON vri	TF binding site BDTNP1_TFBS_dl
3L	11115451	3L_11115451_SNP [dm3] 3L_11122351_SNP [dm6]	A	G	1.604e^-4	0.476	NON_SYNONYMOUS_CODING Ufd1-like UPSTREAM CG42575 DOWNSTREAM mRpL2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2R	11823241	2R_11823241_SNP [dm3] 2R_15935736_SNP [dm6]	C	T	1.604e^-4	0.476	NON_SYNONYMOUS_CODING CG8297 UPSTREAM Iap2 DOWNSTREAM Mlf
2L	1288800	2L_1288800_SNP [dm3] 2L_1288800_SNP [dm6]	C	A	1.607e^-4	0.476	INTRON robo3
2L	5788362	2L_5788362_SNP [dm3] 2L_5788362_SNP [dm6]	C	T	1.612e^-4	0.477	INTRON CG9171	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	10093088	2L_10093088_SNP [dm3] 2L_10093088_SNP [dm6]	G	T	1.615e^-4	0.477	UPSTREAM CG13133 & 1 other INTRON CG44153
3L	9242180	3L_9242180_SNP [dm3] 3L_9249080_SNP [dm6]	C	T	1.617e^-4	0.477	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	3876162	2L_3876162_SNP [dm3] 2L_3876162_SNP [dm6]	C	A	1.621e^-4	0.477	INTRON capu
2L	10815373	2L_10815373_SNP [dm3] 2L_10815373_SNP [dm6]	G	A	1.634e^-4	0.478	INTRON Nos
2R	7485861	2R_7485861_INS [dm3] 2R_11598356_INS [dm6]	G	GAG	1.635e^-4	0.478	INTRON tou	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3L	10715224	3L_10715224_SNP [dm3] 3L_10722124_SNP [dm6]	T	A	1.636e^-4	0.478	INTERGENIC
3L	15895808	3L_15895808_SNP [dm3] 3L_15902708_SNP [dm6]	A	C	1.637e^-4	0.478	UTR_3_PRIME sff
2L	8568832	2L_8568832_SNP [dm3] 2L_8568832_SNP [dm6]	T	G	1.642e^-4	0.478	INTRON Sema-1a
2R	13499941	2R_13499941_SNP [dm3] 2R_17612436_SNP [dm6]	C	T	1.643e^-4	0.478	INTRON CG10936
2R	16440564	2R_16440564_SNP [dm3] 2R_20553059_SNP [dm6]	G	A	1.643e^-4	0.478	UPSTREAM CG13430 & 1 other INTERGENIC
X	17300532	X_17300532_DEL [dm3] X_17406499_DEL [dm6]	AGTAG	A	1.648e^-4	0.478	INTERGENIC
2L	10185367	2L_10185367_SNP [dm3] 2L_10185367_SNP [dm6]	G	T	1.649e^-4	0.478	SPLICE_SITE_REGION Sur INTRON Sur	TF binding site mE1_TFBS_inv
2L	15319034	2L_15319034_SNP [dm3] 2L_15319034_SNP [dm6]	G	A	1.651e^-4	0.478	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	10890151	2R_10890151_SNP [dm3] 2R_15002646_SNP [dm6]	A	G	1.652e^-4	0.478	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
3L	14689370	3L_14689370_SNP [dm3] 3L_14696270_SNP [dm6]	G	T	1.657e^-4	0.478	DOWNSTREAM CG13474 INTRON ome
3R	26937747	3R_26937747_SNP [dm3] 3R_31112025_SNP [dm6]	G	A	1.657e^-4	0.478	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	20193970	3R_20193970_SNP [dm3] 3R_24368248_SNP [dm6]	A	G	1.661e^-4	0.478	UPSTREAM CG33341 & 1 other INTERGENIC
3L	9602783	3L_9602783_SNP [dm3] 3L_9609683_SNP [dm6]	G	A	1.672e^-4	0.479	SYNONYMOUS_CODING CG3280
3R	3472168	3R_3472168_SNP [dm3] 3R_7646446_SNP [dm6]	T	C	1.674e^-4	0.479	INTERGENIC
3R	13596478	3R_13596478_SNP [dm3] 3R_17770756_SNP [dm6]	G	A	1.676e^-4	0.479	SYNONYMOUS_CODING CG43102
3L	15836322	3L_15836322_SNP [dm3] 3L_15843222_SNP [dm6]	T	G	1.676e^-4	0.479	DOWNSTREAM mir-263b INTRON CG32150	TF binding site mE1_TFBS_HSA
2R	14414854	2R_14414854_SNP [dm3] 2R_18527349_SNP [dm6]	G	C	1.677e^-4	0.479	UPSTREAM CG10924 DOWNSTREAM CG43066 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10862986	2R_10862986_SNP [dm3] 2R_14975481_SNP [dm6]	C	T	1.678e^-4	0.479	UPSTREAM ckn INTRON ckn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	3815578	2L_3815578_DEL [dm3] 2L_3815578_DEL [dm6]	CAAGCGT	C	1.680e^-4	0.479	EXON CR44076	regulatory region REDfly_CRMs
2R	6995213	2R_6995213_SNP [dm3] 2R_11107708_SNP [dm6]	A	G	1.684e^-4	0.479	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	26397466	3R_26397466_SNP [dm3] 3R_30571744_SNP [dm6]	A	G	1.685e^-4	0.479	INTRON tmod
2L	11208975	2L_11208975_SNP [dm3] 2L_11208975_SNP [dm6]	A	G	1.692e^-4	0.479	INTERGENIC
2L	3954627	2L_3954627_SNP [dm3] 2L_3954627_SNP [dm6]	A	G	1.696e^-4	0.479	INTRON fred
3R	25870741	3R_25870741_SNP [dm3] 3R_30045019_SNP [dm6]	A	C	1.698e^-4	0.479	DOWNSTREAM RpL32 & 1 other INTERGENIC
3L	3599150	3L_3599150_SNP [dm3] 3L_3599150_SNP [dm6]	A	C	1.698e^-4	0.479	INTRON Eip63E
3L	7534647	3L_7534647_SNP [dm3] 3L_7541547_SNP [dm6]	C	A	1.702e^-4	0.479	UPSTREAM CG32374 DOWNSTREAM CG32376 INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	12351033	3L_12351033_SNP [dm3] 3L_12357933_SNP [dm6]	G	T	1.702e^-4	0.479	INTERGENIC
2L	3797314	2L_3797314_SNP [dm3] 2L_3797314_SNP [dm6]	T	C	1.712e^-4	0.479	SYNONYMOUS_CODING CG3921
X	6448837	X_6448837_SNP [dm3] X_6554804_SNP [dm6]	G	A	1.712e^-4	0.479	UTR_3_PRIME CG34417 INTRON CG34417
2L	4813386	2L_4813386_SNP [dm3] 2L_4813386_SNP [dm6]	T	G	1.713e^-4	0.479	NON_SYNONYMOUS_CODING CG15629
3R	23056842	3R_23056842_SNP [dm3] 3R_27231120_SNP [dm6]	G	T	1.717e^-4	0.479	UTR_3_PRIME CG31064 INTRON CG31064
X	10864702	X_10864702_INS [dm3] X_10970669_INS [dm6]	A	AA	1.717e^-4	0.479	INTRON CG42339
2R	10279288	2R_10279288_SNP [dm3] 2R_14391783_SNP [dm6]	G	A	1.717e^-4	0.479	SYNONYMOUS_CODING CG10104	TF binding site mE1_TFBS_cad
X	5538496	X_5538496_SNP [dm3] X_5644463_SNP [dm6]	A	C	1.721e^-4	0.479	INTRON CG42492
3R	4247250	3R_4247250_SNP [dm3] 3R_8421528_SNP [dm6]	G	T	1.721e^-4	0.479	UPSTREAM Obp85a INTRON CG45263
3R	21178074	3R_21178074_SNP [dm3] 3R_25352352_SNP [dm6]	G	T	1.723e^-4	0.479	DOWNSTREAM Fur1 INTRON Fur1
2R	7071103	2R_7071103_SNP [dm3] 2R_11183598_SNP [dm6]	T	G	1.732e^-4	0.48	INTRON shn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA
3L	2477777	3L_2477777_SNP [dm3] 3L_2477777_SNP [dm6]	C	T	1.736e^-4	0.481	NON_SYNONYMOUS_CODING Cyp4d20 INTRON CG45186	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
X	17087871	X_17087871_SNP [dm3] X_17193838_SNP [dm6]	C	T	1.738e^-4	0.481	INTRON baz
2R	7183727	2R_7183727_SNP [dm3] 2R_11296222_SNP [dm6]	T	G	1.744e^-4	0.481	UPSTREAM CG42336 INTRON CG42336	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3R	16225894	3R_16225894_SNP [dm3] 3R_20400172_SNP [dm6]	C	A	1.748e^-4	0.481	DOWNSTREAM Gfrl INTRON Gfrl	TF binding site mE1_TFBS_cad
X	16680893	X_16680893_SNP [dm3] X_16786860_SNP [dm6]	G	T	1.754e^-4	0.481	UTR_5_PRIME CG9609 UPSTREAM Sap30	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
X	17064080	X_17064080_SNP [dm3] X_17170047_SNP [dm6]	T	C	1.755e^-4	0.481	INTRON baz	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	7534313	3L_7534313_SNP [dm3] 3L_7541213_SNP [dm6]	G	C	1.758e^-4	0.481	UPSTREAM CG32374 DOWNSTREAM CG32376 INTERGENIC
2R	14756345	2R_14756345_SNP [dm3] 2R_18868840_SNP [dm6]	A	C	1.760e^-4	0.481	UPSTREAM CG43109 DOWNSTREAM DptB INTERGENIC
3R	27169612	3R_27169612_SNP [dm3] 3R_31343890_SNP [dm6]	A	G	1.762e^-4	0.481	INTRON CG34347
3R	24048256	3R_24048256_DEL [dm3] 3R_28222534_DEL [dm6]	CACGCCGCCC	C	1.767e^-4	0.481	INTRON CG34354
2R	6098415	2R_6098415_SNP [dm3] 2R_10210910_SNP [dm6]	G	A	1.767e^-4	0.481	INTRON Hr46 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3R	17737219	3R_17737219_SNP [dm3] 3R_21911497_SNP [dm6]	G	A	1.768e^-4	0.481	UPSTREAM CG6690 INTERGENIC
2R	9347579	2R_9347579_SNP [dm3] 2R_13460074_SNP [dm6]	G	A	1.769e^-4	0.481	INTRON arr	TF binding site mE1_TFBS_chinmo
3L	7729028	3L_7729028_SNP [dm3] 3L_7735928_SNP [dm6]	C	T	1.772e^-4	0.481	INTRON CG32373 & 1 other
2R	6736538	2R_6736538_SNP [dm3] 2R_10849033_SNP [dm6]	G	A	1.778e^-4	0.481	SYNONYMOUS_CODING CG30015 START_GAINED CG30015 UTR_5_PRIME CG30015	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	20384406	2R_20384406_SNP [dm3] 2R_24496883_SNP [dm6]	A	G	1.778e^-4	0.481	SYNONYMOUS_CODING Crtp	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	10648482	3L_10648482_SNP [dm3] 3L_10655382_SNP [dm6]	A	T	1.782e^-4	0.481	INTRON CG32066
2L	8066027	2L_8066027_SNP [dm3] 2L_8066027_SNP [dm6]	A	G	1.789e^-4	0.481	SYNONYMOUS_CODING poe	TF binding site mE1_TFBS_cad
3R	7696379	3R_7696379_SNP [dm3] 3R_11870657_SNP [dm6]	C	T	1.789e^-4	0.481	INTERGENIC
3L	6243875	3L_6243875_SNP [dm3] 3L_6250775_SNP [dm6]	G	C	1.789e^-4	0.481	INTRON Best2
2R	6372295	2R_6372295_SNP [dm3] 2R_10484790_SNP [dm6]	A	G	1.792e^-4	0.481	UTR_5_PRIME pre-lola-G INTRON lola	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2R	10901053	2R_10901053_SNP [dm3] 2R_15013548_SNP [dm6]	T	C	1.795e^-4	0.481	UPSTREAM CG43101 INTRON hbs
3R	7709869	3R_7709869_SNP [dm3] 3R_11884147_SNP [dm6]	C	A	1.797e^-4	0.481	SYNONYMOUS_CODING mthl5 INTRON CG31368
3R	19563053	3R_19563053_DEL [dm3] 3R_23737331_DEL [dm6]	AA	A	1.803e^-4	0.481	INTRON Hmgcr
2L	3211514	2L_3211514_SNP [dm3] 2L_3211514_SNP [dm6]	C	T	1.807e^-4	0.481	DOWNSTREAM CR45336 INTERGENIC
3R	21487003	3R_21487003_SNP [dm3] 3R_25661281_SNP [dm6]	C	T	1.809e^-4	0.481	UTR_5_PRIME Tnks UPSTREAM RASSF8 DOWNSTREAM CR45208	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2R	8909873	2R_8909873_DEL [dm3] 2R_13022368_DEL [dm6]	TT	T	1.810e^-4	0.481	INTERGENIC
3R	20400124	3R_20400124_SNP [dm3] 3R_24574402_SNP [dm6]	T	A	1.811e^-4	0.481	INTRON CG13624
3L	6461097	3L_6461097_SNP [dm3] 3L_6467997_SNP [dm6]	A	G	1.829e^-4	0.481	INTRON CG42747	TF binding site mE1_TFBS_cad
3R	20334369	3R_20334369_SNP [dm3] 3R_24508647_SNP [dm6]	T	A	1.829e^-4	0.481	DOWNSTREAM nAChRbeta2 INTERGENIC
3R	20661315	3R_20661315_INS [dm3] 3R_24835593_INS [dm6]	A	ATACACA	1.830e^-4	0.481	UPSTREAM CR45216 & 1 other INTRON sosie	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2R	16661835	2R_16661835_SNP [dm3] 2R_20774330_SNP [dm6]	C	G	1.833e^-4	0.481	NON_SYNONYMOUS_CODING CG13443	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7535848	3L_7535848_SNP [dm3] 3L_7542748_SNP [dm6]	A	G	1.834e^-4	0.481	UPSTREAM CG32376 INTERGENIC
3R	16491665	3R_16491665_SNP [dm3] 3R_20665943_SNP [dm6]	G	A	1.838e^-4	0.481	INTERGENIC	TF binding site BDTNP1_TFBS_prd
2R	12022156	2R_12022156_SNP [dm3] 2R_16134651_SNP [dm6]	A	G	1.838e^-4	0.481	INTRON spin
2L	15319447	2L_15319447_SNP [dm3] 2L_15319447_SNP [dm6]	A	G	1.842e^-4	0.481	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	10785598	2L_10785598_SNP [dm3] 2L_10785598_SNP [dm6]	A	T	1.847e^-4	0.481	INTRON CG31869 EXON CR44582
2R	14414859	2R_14414859_SNP [dm3] 2R_18527354_SNP [dm6]	C	G	1.849e^-4	0.481	UPSTREAM CG10924 DOWNSTREAM CG43066 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	808741	2L_808741_SNP [dm3] 2L_808741_SNP [dm6]	C	A	1.851e^-4	0.481	INTERGENIC
2R	9347750	2R_9347750_SNP [dm3] 2R_13460245_SNP [dm6]	G	A	1.853e^-4	0.481	INTRON arr	TF binding site mE1_TFBS_chinmo
3L	2477826	3L_2477826_SNP [dm3] 3L_2477826_SNP [dm6]	T	C	1.854e^-4	0.481	SYNONYMOUS_CODING Cyp4d20 INTRON CG45186	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19682278	2R_19682278_SNP [dm3] 2R_23794755_SNP [dm6]	T	A	1.859e^-4	0.481	INTRON CG9850
2R	6372270	2R_6372270_SNP [dm3] 2R_10484765_SNP [dm6]	A	G	1.860e^-4	0.481	UTR_5_PRIME pre-lola-G INTRON lola	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2R	4496311	2R_4496311_SNP [dm3] 2R_8608806_SNP [dm6]	C	A	1.861e^-4	0.481	INTRON rgr
3L	16819814	3L_16819814_SNP [dm3] 3L_16826714_SNP [dm6]	G	T	1.863e^-4	0.481	INTRON CG13024
X	3316023	X_3316023_INS [dm3] X_3421990_INS [dm6]	C	CCAG	1.872e^-4	0.481	INTRON CR44999 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
4	141694	4_141694_SNP [dm3] 4_121068_SNP [dm6]	T	A	1.876e^-4	0.481	SYNONYMOUS_CODING Ank
3L	906637	3L_906637_DEL [dm3] 3L_906637_DEL [dm6]	ATTGACAGG	A	1.880e^-4	0.481	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
3R	12516525	3R_12516525_SNP [dm3] 3R_16690803_SNP [dm6]	T	G	1.887e^-4	0.481	INTRON Ubx	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	15346883	2L_15346883_SNP [dm3] 2L_15346883_SNP [dm6]	T	C	1.888e^-4	0.481	INTERGENIC
3L	3681438	3L_3681438_SNP [dm3] 3L_3681438_SNP [dm6]	C	T	1.891e^-4	0.481	INTERGENIC
2L	5308988	2L_5308988_SNP [dm3] 2L_5308988_SNP [dm6]	G	C	1.894e^-4	0.481	SYNONYMOUS_CODING vri	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	19038647	3R_19038647_SNP [dm3] 3R_23212925_SNP [dm6]	T	C	1.899e^-4	0.481	INTRON cnc	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_HSA
3R	19615776	3R_19615776_SNP [dm3] 3R_23790054_SNP [dm6]	A	T	1.901e^-4	0.481	INTRON mbc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	22064188	3R_22064188_SNP [dm3] 3R_26238466_SNP [dm6]	T	A	1.904e^-4	0.481	INTRON CR42745
3R	21487220	3R_21487220_SNP [dm3] 3R_25661498_SNP [dm6]	T	C	1.904e^-4	0.481	UPSTREAM RASSF8 & 1 other DOWNSTREAM CR45208 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Ubx
2R	11875687	2R_11875687_SNP [dm3] 2R_15988182_SNP [dm6]	G	A	1.908e^-4	0.481	UPSTREAM Strn-Mlck DOWNSTREAM CR45021 INTRON Strn-Mlck
2R	9128478	2R_9128478_SNP [dm3] 2R_13240973_SNP [dm6]	G	C	1.908e^-4	0.481	UTR_3_PRIME GstE14	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	18723426	2L_18723426_SNP [dm3] 2L_18723426_SNP [dm6]	A	T	1.910e^-4	0.481	INTRON CG10348
2R	9805060	2R_9805060_SNP [dm3] 2R_13917555_SNP [dm6]	G	T	1.914e^-4	0.481	INTRON shot
2R	11798470	2R_11798470_SNP [dm3] 2R_15910965_SNP [dm6]	C	T	1.914e^-4	0.481	INTRON sli
X	16731635	X_16731635_SNP [dm3] X_16837602_SNP [dm6]	T	A	1.915e^-4	0.481	DOWNSTREAM RSG7 INTERGENIC
2R	4324697	2R_4324697_SNP [dm3] 2R_8437192_SNP [dm6]	G	A	1.915e^-4	0.481	UPSTREAM Lcp4 INTERGENIC
3R	10496990	3R_10496990_SNP [dm3] 3R_14671268_SNP [dm6]	T	C	1.915e^-4	0.481	INTRON Meltrin	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	24210996	3R_24210996_SNP [dm3] 3R_28385274_SNP [dm6]	G	T	1.923e^-4	0.481	INTERGENIC
3R	22184593	3R_22184593_SNP [dm3] 3R_26358871_SNP [dm6]	T	A	1.923e^-4	0.481	INTRON CG33970
2L	15841761	2L_15841761_SNP [dm3] 2L_15841761_SNP [dm6]	A	T	1.925e^-4	0.481	UPSTREAM CR45694 INTERGENIC
X	5618645	X_5618645_DEL [dm3] X_5724612_DEL [dm6]	TT	T	1.927e^-4	0.481	INTRON CG32758
3R	10273836	3R_10273836_SNP [dm3] 3R_14448114_SNP [dm6]	T	C	1.936e^-4	0.481	INTRON cv-c
2R	6098403	2R_6098403_SNP [dm3] 2R_10210898_SNP [dm6]	G	T	1.937e^-4	0.481	INTRON Hr46 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2R	11824763	2R_11824763_SNP [dm3] 2R_15937258_SNP [dm6]	C	A	1.938e^-4	0.481	UTR_3_PRIME Mlf INTRON Mlf	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	15629847	3L_15629847_SNP [dm3] 3L_15636747_SNP [dm6]	A	T	1.944e^-4	0.481	INTRON comm3
2R	10767004	2R_10767004_SNP [dm3] 2R_14879499_SNP [dm6]	C	T	1.944e^-4	0.481	UTR_3_PRIME Cyp6a19 & 1 other
2R	16376332	2R_16376332_SNP [dm3] 2R_20488827_SNP [dm6]	T	A	1.945e^-4	0.481	INTERGENIC
3L	11116380	3L_11116380_SNP [dm3] 3L_11123280_SNP [dm6]	C	A	1.945e^-4	0.481	UPSTREAM CG42575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	26397443	3R_26397443_SNP [dm3] 3R_30571721_SNP [dm6]	A	G	1.947e^-4	0.481	INTRON tmod
2R	17089888	2R_17089888_SNP [dm3] 2R_21202383_SNP [dm6]	A	T	1.947e^-4	0.481	UPSTREAM Glycogenin INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	5538589	X_5538589_SNP [dm3] X_5644556_SNP [dm6]	A	C	1.948e^-4	0.481	INTRON CG42492
3R	23797265	3R_23797265_SNP [dm3] 3R_27971543_SNP [dm6]	A	C	1.948e^-4	0.481	INTRON betaTub97EF
X	17061234	X_17061234_SNP [dm3] X_17167201_SNP [dm6]	A	G	1.949e^-4	0.481	INTRON baz
2R	19741533	2R_19741533_SNP [dm3] 2R_23854010_SNP [dm6]	C	G	1.949e^-4	0.481	SYNONYMOUS_CODING bgcn DOWNSTREAM gbb	TF binding site mE1_TFBS_cad
3L	4716316	3L_4716316_SNP [dm3] 3L_4716316_SNP [dm6]	C	A	1.958e^-4	0.481	INTRON RhoGEF64C
3R	21066882	3R_21066882_SNP [dm3] 3R_25241160_SNP [dm6]	T	C	1.961e^-4	0.481	SYNONYMOUS_CODING to UPSTREAM CG11854
3R	9389861	3R_9389861_SNP [dm3] 3R_13564139_SNP [dm6]	G	C	1.962e^-4	0.481	INTERGENIC
2L	3678948	2L_3678948_SNP [dm3] 2L_3678948_SNP [dm6]	C	T	1.965e^-4	0.481	INTRON CG34340
3L	9602378	3L_9602378_SNP [dm3] 3L_9609278_SNP [dm6]	C	A	1.966e^-4	0.481	SYNONYMOUS_CODING CG3280
X	11282258	X_11282258_SNP [dm3] X_11388225_SNP [dm6]	T	C	1.973e^-4	0.481	UTR_3_PRIME dlg1 INTRON dlg1
2L	3091180	2L_3091180_DEL [dm3] 2L_3091180_DEL [dm6]	TGT	T	1.975e^-4	0.481	UPSTREAM toc INTRON toc
3R	19658093	3R_19658093_SNP [dm3] 3R_23832371_SNP [dm6]	G	A	1.976e^-4	0.481	INTRON CG34355	TF binding site mE1_TFBS_chinmo
2R	9143400	2R_9143400_INS [dm3] 2R_13255895_INS [dm6]	T	TT	1.976e^-4	0.481	UPSTREAM CR44343 & 1 other INTERGENIC
3L	11900565	3L_11900565_SNP [dm3] 3L_11907465_SNP [dm6]	G	A	1.978e^-4	0.481	INTRON CG44837
X	18742999	X_18742999_SNP [dm3] X_18848966_SNP [dm6]	T	C	1.982e^-4	0.481	UPSTREAM CG34422 & 1 other INTRON CG34422
2L	5290001	2L_5290001_SNP [dm3] 2L_5290001_SNP [dm6]	C	T	1.986e^-4	0.481	INTRON vri	TF binding site BDTNP1_TFBS_dl
3L	4716314	3L_4716314_SNP [dm3] 3L_4716314_SNP [dm6]	C	A	1.988e^-4	0.481	INTRON RhoGEF64C
3R	18327463	3R_18327463_SNP [dm3] 3R_22501741_SNP [dm6]	G	A	1.989e^-4	0.481	INTRON Octbeta1R	regulatory region REDfly_CRMs
3L	15629985	3L_15629985_SNP [dm3] 3L_15636885_SNP [dm6]	G	A	1.989e^-4	0.481	INTRON comm3	TF binding site mE1_TFBS_bab1
2L	11655879	2L_11655879_SNP [dm3] 2L_11655879_SNP [dm6]	T	C	1.995e^-4	0.481	INTERGENIC
2R	6995562	2R_6995562_SNP [dm3] 2R_11108057_SNP [dm6]	G	T	1.996e^-4	0.481	INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	17802824	2R_17802824_SNP [dm3] 2R_21915319_SNP [dm6]	G	T	1.999e^-4	0.481	INTRON Fili
3R	19440252	3R_19440252_SNP [dm3] 3R_23614530_SNP [dm6]	G	T	2.006e^-4	0.481	INTRON CG31145
3R	20674863	3R_20674863_SNP [dm3] 3R_24849141_SNP [dm6]	C	A	2.006e^-4	0.481	SYNONYMOUS_CODING Esp	TF binding site mE1_TFBS_sens
3R	26343190	3R_26343190_SNP [dm3] 3R_30517468_SNP [dm6]	C	T	2.007e^-4	0.481	UTR_3_PRIME jdp DOWNSTREAM CG9698
X	5533553	X_5533553_SNP [dm3] X_5639520_SNP [dm6]	A	G	2.010e^-4	0.481	INTRON CG42492	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	11021830	3L_11021830_DEL [dm3] 3L_11028730_DEL [dm6]	CGACC	C	2.010e^-4	0.481	INTRON CG32081	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	5312601	2L_5312601_SNP [dm3] 2L_5312601_SNP [dm6]	C	T	2.010e^-4	0.481	SYNONYMOUS_CODING CG14024	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
X	17256701	X_17256701_SNP [dm3] X_17362668_SNP [dm6]	A	T	2.010e^-4	0.481	INTERGENIC
3L	905761	3L_905761_SNP [dm3] 3L_905761_SNP [dm6]	A	T	2.011e^-4	0.481	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	5618661	X_5618661_DEL [dm3] X_5724628_DEL [dm6]	TGT	T	2.013e^-4	0.481	INTRON CG32758
3L	11120211	3L_11120211_INS [dm3] 3L_11127111_INS [dm6]	A	AT	2.014e^-4	0.481	INTRON CG42575	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
3R	23947671	3R_23947671_SNP [dm3] 3R_28121949_SNP [dm6]	T	A	2.021e^-4	0.482	INTERGENIC
3L	6008353	3L_6008353_SNP [dm3] 3L_6015253_SNP [dm6]	G	A	2.035e^-4	0.483	INTRON PVRAP
3R	25131785	3R_25131785_SNP [dm3] 3R_29306063_SNP [dm6]	C	G	2.036e^-4	0.483	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	25857967	3R_25857967_SNP [dm3] 3R_30032245_SNP [dm6]	A	C	2.038e^-4	0.483	INTRON Axn	TF binding site mE1_TFBS_HSA
2R	7006086	2R_7006086_SNP [dm3] 2R_11118581_SNP [dm6]	A	G	2.042e^-4	0.483	UTR_3_PRIME Cyp12d1-p
3R	20272778	3R_20272778_SNP [dm3] 3R_24447056_SNP [dm6]	G	C	2.044e^-4	0.483	INTRON nAChRalpha1
3R	21487512	3R_21487512_SNP [dm3] 3R_25661790_SNP [dm6]	G	T	2.045e^-4	0.483	UPSTREAM RASSF8 & 1 other EXON CR45208	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3R	20403953	3R_20403953_SNP [dm3] 3R_24578231_SNP [dm6]	T	C	2.057e^-4	0.483	UPSTREAM CG13624 INTRON CG13624
2R	9336299	2R_9336299_SNP [dm3] 2R_13448794_SNP [dm6]	G	T	2.059e^-4	0.483	INTRON cnn	TF binding site BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
X	6385327	X_6385327_SNP [dm3] X_6491294_SNP [dm6]	G	A	2.059e^-4	0.483	INTRON CG42340
3L	11410498	3L_11410498_SNP [dm3] 3L_11417398_SNP [dm6]	G	T	2.061e^-4	0.483	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	9919382	3L_9919382_SNP [dm3] 3L_9926282_SNP [dm6]	A	G	2.061e^-4	0.483	INTRON CG34356	TF binding site mE1_TFBS_HSA
2R	8571405	2R_8571405_SNP [dm3] 2R_12683900_SNP [dm6]	C	T	2.062e^-4	0.483	SYNONYMOUS_CODING CG8771
2L	1128778	2L_1128778_SNP [dm3] 2L_1128778_SNP [dm6]	G	C	2.063e^-4	0.483	UPSTREAM CG4552 INTRON Pino	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	17067610	X_17067610_SNP [dm3] X_17173577_SNP [dm6]	T	C	2.066e^-4	0.483	INTRON baz
3R	19747828	3R_19747828_SNP [dm3] 3R_23922106_SNP [dm6]	G	A	2.069e^-4	0.483	INTRON sba	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
X	13399845	X_13399845_SNP [dm3] X_13505812_SNP [dm6]	A	T	2.072e^-4	0.483	INTRON Neto
X	6217808	X_6217808_SNP [dm3] X_6323775_SNP [dm6]	A	G	2.072e^-4	0.483	SYNONYMOUS_CODING CG15894	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3R	20446159	3R_20446159_SNP [dm3] 3R_24620437_SNP [dm6]	G	T	2.073e^-4	0.483	SYNONYMOUS_CODING mld	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	21945181	X_21945181_SNP [dm3] X_22543345_SNP [dm6]	C	T	2.075e^-4	0.483	SYNONYMOUS_CODING CG17599
2R	9839900	2R_9839900_SNP [dm3] 2R_13952395_SNP [dm6]	A	C	2.079e^-4	0.483	INTRON AGO1	TF binding site BDTNP1_TFBS_dl
3L	7729027	3L_7729027_SNP [dm3] 3L_7735927_SNP [dm6]	G	A	2.083e^-4	0.483	INTRON CG32373 & 1 other
2R	5735679	2R_5735679_SNP [dm3] 2R_9848174_SNP [dm6]	T	C	2.083e^-4	0.483	UPSTREAM Prosalpha7 INTRON CG1671	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cnc mE1_TFBS_HSA
2L	5341706	2L_5341706_SNP [dm3] 2L_5341706_SNP [dm6]	T	A	2.090e^-4	0.483	INTRON CG12512
2R	11865390	2R_11865390_SNP [dm3] 2R_15977885_SNP [dm6]	G	A	2.096e^-4	0.483	SYNONYMOUS_CODING Strn-Mlck
X	4698746	X_4698746_SNP [dm3] X_4804713_SNP [dm6]	C	T	2.097e^-4	0.483	UTR_5_PRIME CG2861 DOWNSTREAM CR45516
2R	5351364	2R_5351364_SNP [dm3] 2R_9463859_SNP [dm6]	A	G	2.100e^-4	0.483	UPSTREAM Camta INTRON Camta
X	16741332	X_16741332_SNP [dm3] X_16847299_SNP [dm6]	A	G	2.100e^-4	0.483	SYNONYMOUS_CODING CG13003	TF binding site mE1_TFBS_chinmo mE1_TFBS_eve mE1_TFBS_HSA
3R	24173201	3R_24173201_SNP [dm3] 3R_28347479_SNP [dm6]	G	A	2.102e^-4	0.483	INTERGENIC
3L	9997822	3L_9997822_INS [dm3] 3L_10004722_INS [dm6]	A	AA	2.104e^-4	0.483	INTRON dpr6
3R	19204353	3R_19204353_SNP [dm3] 3R_23378631_SNP [dm6]	C	T	2.107e^-4	0.483	SYNONYMOUS_CODING CG4393	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	9388116	3R_9388116_SNP [dm3] 3R_13562394_SNP [dm6]	G	A	2.109e^-4	0.483	INTERGENIC	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA
X	21922316	X_21922316_SNP [dm3] X_22520480_SNP [dm6]	A	T	2.122e^-4	0.483	INTRON CG17600
X	5538556	X_5538556_SNP [dm3] X_5644523_SNP [dm6]	A	C	2.122e^-4	0.483	INTRON CG42492
3R	19050151	3R_19050151_SNP [dm3] 3R_23224429_SNP [dm6]	A	C	2.126e^-4	0.483	INTRON cnc
3R	19204995	3R_19204995_SNP [dm3] 3R_23379273_SNP [dm6]	A	G	2.128e^-4	0.483	SYNONYMOUS_CODING CG4393	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	6481333	X_6481333_SNP [dm3] X_6587300_SNP [dm6]	C	T	2.131e^-4	0.483	INTRON CG34417	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	1293257	2L_1293257_SNP [dm3] 2L_1293257_SNP [dm6]	A	G	2.132e^-4	0.483	SYNONYMOUS_CODING robo3	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	12872795	2R_12872795_SNP [dm3] 2R_16985290_SNP [dm6]	T	G	2.134e^-4	0.483	INTRON Cbp53E
2L	8568848	2L_8568848_SNP [dm3] 2L_8568848_SNP [dm6]	G	C	2.137e^-4	0.483	INTRON Sema-1a
2R	5423298	2R_5423298_SNP [dm3] 2R_9535793_SNP [dm6]	C	T	2.144e^-4	0.483	INTRON brp	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo
3R	20639270	3R_20639270_SNP [dm3] 3R_24813548_SNP [dm6]	G	A	2.147e^-4	0.483	UPSTREAM CG34150 INTRON CG5807	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	20640698	3R_20640698_SNP [dm3] 3R_24814976_SNP [dm6]	T	A	2.147e^-4	0.483	STOP_GAINED CG5808 UPSTREAM CG5807 DOWNSTREAM CG34150	TF binding site mE1_TFBS_cad
3R	20666417	3R_20666417_DEL [dm3] 3R_24840695_DEL [dm6]	AGGGAACACGATCT...	A	2.147e^-4	0.483	SPLICE_SITE_REGION CG33658 DOWNSTREAM sosie INTRON CG33658
3L	5985722	3L_5985722_SNP [dm3] 3L_5992622_SNP [dm6]	T	C	2.147e^-4	0.483	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA
3R	19869955	3R_19869955_SNP [dm3] 3R_24044233_SNP [dm6]	C	G	2.148e^-4	0.483	NON_SYNONYMOUS_CODING Rox8	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	16013736	3R_16013736_INS [dm3] 3R_20188014_INS [dm6]	A	TGAATCAAGC	2.149e^-4	0.483	INTERGENIC
3L	7534453	3L_7534453_SNP [dm3] 3L_7541353_SNP [dm6]	G	A	2.150e^-4	0.483	UPSTREAM CG32374 DOWNSTREAM CG32376 INTERGENIC
2R	13052491	2R_13052491_SNP [dm3] 2R_17164986_SNP [dm6]	A	T	2.151e^-4	0.483	DOWNSTREAM CG10953 INTERGENIC
2R	11969696	2R_11969696_INS [dm3] 2R_16082191_INS [dm6]	A	AG	2.155e^-4	0.483	UTR_3_PRIME Dg
X	4701561	X_4701561_SNP [dm3] X_4807528_SNP [dm6]	G	A	2.158e^-4	0.483	INTERGENIC
3L	12642854	3L_12642854_SNP [dm3] 3L_12649754_SNP [dm6]	G	A	2.162e^-4	0.483	EXON CR43431	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens
2R	15675689	2R_15675689_SNP [dm3] 2R_19788184_SNP [dm6]	G	T	2.162e^-4	0.483	EXON CR45231
2R	12335413	2R_12335413_SNP [dm3] 2R_16447908_SNP [dm6]	T	C	2.164e^-4	0.483	DOWNSTREAM CG15925 INTERGENIC
2R	5749376	2R_5749376_SNP [dm3] 2R_9861871_SNP [dm6]	G	A	2.165e^-4	0.483	UPSTREAM CG1516 DOWNSTREAM CR44293 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	21573559	3R_21573559_SNP [dm3] 3R_25747837_SNP [dm6]	G	A	2.172e^-4	0.484	INTRON LpR1
3R	18055346	3R_18055346_SNP [dm3] 3R_22229624_SNP [dm6]	A	T	2.174e^-4	0.484	INTRON SKIP
3R	19210394	3R_19210394_SNP [dm3] 3R_23384672_SNP [dm6]	T	C	2.178e^-4	0.484	UTR_5_PRIME CG4393	TF binding site mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_Trl
X	13397397	X_13397397_SNP [dm3] X_13503364_SNP [dm6]	G	C	2.183e^-4	0.484	INTRON Neto
3R	21399314	3R_21399314_SNP [dm3] 3R_25573592_SNP [dm6]	C	A	2.185e^-4	0.484	INTRON msi
2R	6995561	2R_6995561_SNP [dm3] 2R_11108056_SNP [dm6]	G	T	2.185e^-4	0.484	INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	9490959	3L_9490959_SNP [dm3] 3L_9497859_SNP [dm6]	C	A	2.186e^-4	0.484	UPSTREAM path INTRON path
2L	5342598	2L_5342598_SNP [dm3] 2L_5342598_SNP [dm6]	T	C	2.188e^-4	0.484	UPSTREAM CG12512 INTERGENIC
3R	23663059	3R_23663059_SNP [dm3] 3R_27837337_SNP [dm6]	T	G	2.192e^-4	0.484	INTRON CG34353
3R	26353022	3R_26353022_SNP [dm3] 3R_30527300_SNP [dm6]	A	G	2.196e^-4	0.484	UPSTREAM jdp DOWNSTREAM CR45552 INTERGENIC
2R	7003912	2R_7003912_SNP [dm3] 2R_11116407_SNP [dm6]	G	A	2.199e^-4	0.484	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	19042536	3R_19042536_SNP [dm3] 3R_23216814_SNP [dm6]	A	G	2.201e^-4	0.484	INTRON cnc
2L	5313100	2L_5313100_SNP [dm3] 2L_5313100_SNP [dm6]	C	G	2.202e^-4	0.484	INTRON CG14024	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	8850108	3L_8850108_SNP [dm3] 3L_8857008_SNP [dm6]	T	A	2.209e^-4	0.485	INTRON dally
3L	906203	3L_906203_SNP [dm3] 3L_906203_SNP [dm6]	A	G	2.213e^-4	0.485	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	701081	2L_701081_SNP [dm3] 2L_701081_SNP [dm6]	A	T	2.213e^-4	0.485	INTRON ds	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_Trl
3R	4405450	3R_4405450_SNP [dm3] 3R_8579728_SNP [dm6]	G	T	2.215e^-4	0.485	INTRON 5-HT2B
X	16428832	X_16428832_SNP [dm3] X_16534799_SNP [dm6]	T	C	2.220e^-4	0.485	INTERGENIC
2L	7107395	2L_7107395_SNP [dm3] 2L_7107395_SNP [dm6]	G	A	2.220e^-4	0.485	INTRON Pvf3
3R	21487639	3R_21487639_SNP [dm3] 3R_25661917_SNP [dm6]	A	C	2.239e^-4	0.486	UTR_5_PRIME RASSF8 UPSTREAM Tnks EXON CR45208	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	1563703	3L_1563703_DEL [dm3] 3L_1563703_DEL [dm6]	GAT	C	2.241e^-4	0.486	INTRON CG7879
3R	26342655	3R_26342655_SNP [dm3] 3R_30516933_SNP [dm6]	G	A	2.244e^-4	0.486	DOWNSTREAM jdp & 1 other INTERGENIC
3L	3395783	3L_3395783_SNP [dm3] 3L_3395783_SNP [dm6]	A	C	2.246e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
X	3944748	X_3944748_SNP [dm3] X_4050715_SNP [dm6]	A	G	2.246e^-4	0.486	INTERGENIC
3L	12643079	3L_12643079_SNP [dm3] 3L_12649979_SNP [dm6]	G	A	2.250e^-4	0.486	EXON CR43431	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_sens
3L	10874531	3L_10874531_SNP [dm3] 3L_10881431_SNP [dm6]	G	T	2.257e^-4	0.486	NON_SYNONYMOUS_CODING CG6409	TF binding site mE1_TFBS_chinmo
3R	20302161	3R_20302161_SNP [dm3] 3R_24476439_SNP [dm6]	C	A	2.258e^-4	0.486	INTERGENIC
2R	10239526	2R_10239526_SNP [dm3] 2R_14352021_SNP [dm6]	G	T	2.258e^-4	0.486	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
3R	21071337	3R_21071337_SNP [dm3] 3R_25245615_SNP [dm6]	C	T	2.262e^-4	0.486	UPSTREAM bam DOWNSTREAM RpS27 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	12810427	3L_12810427_SNP [dm3] 3L_12817327_SNP [dm6]	C	A	2.262e^-4	0.486	NON_SYNONYMOUS_CODING CG42588	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	5071196	3L_5071196_SNP [dm3] 3L_5071196_SNP [dm6]	T	C	2.263e^-4	0.486	INTRON Con
3R	17931437	3R_17931437_SNP [dm3] 3R_22105715_SNP [dm6]	A	T	2.265e^-4	0.486	DOWNSTREAM CG13407 INTRON CG5778
3R	19020819	3R_19020819_SNP [dm3] 3R_23195097_SNP [dm6]	A	T	2.268e^-4	0.486	INTRON cnc	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	12095904	3R_12095904_SNP [dm3] 3R_16270182_SNP [dm6]	C	T	2.268e^-4	0.486	NON_SYNONYMOUS_CODING Mat89Ba	TF binding site mE1_TFBS_sens
X	18077105	X_18077105_INS [dm3] X_18183072_INS [dm6]	A	AA	2.272e^-4	0.486	INTRON Frq2	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
X	18077155	X_18077155_INS [dm3] X_18183122_INS [dm6]	T	TT	2.272e^-4	0.486	INTRON Frq2	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
2L	22886706	2L_22886706_DEL [dm3] 2L_22993974_DEL [dm6]	TCTATGTACATAT...	T	2.280e^-4	0.486	INTERGENIC
2R	12295401	2R_12295401_SNP [dm3] 2R_16407896_SNP [dm6]	C	T	2.280e^-4	0.486	INTRON Sema-2b
2R	6786881	2R_6786881_SNP [dm3] 2R_10899376_SNP [dm6]	G	A	2.281e^-4	0.486	UPSTREAM Rpb5 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	11266057	3L_11266057_SNP [dm3] 3L_11272957_SNP [dm6]	T	A	2.292e^-4	0.486	INTERGENIC
3L	3380858	3L_3380858_SNP [dm3] 3L_3380858_SNP [dm6]	C	A	2.295e^-4	0.486	DOWNSTREAM CG12014 INTERGENIC
2R	7007519	2R_7007519_DEL [dm3] 2R_11120014_DEL [dm6]	TT	T	2.297e^-4	0.486	UTR_3_PRIME Cyp12d1-p
X	15818242	X_15818242_INS [dm3] X_15924209_INS [dm6]	T	TGTATGT	2.298e^-4	0.486	UPSTREAM Lcch3 INTRON CG8916	TF binding site mE1_TFBS_sens
2R	10239483	2R_10239483_SNP [dm3] 2R_14351978_SNP [dm6]	C	A	2.300e^-4	0.486	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
2R	9408669	2R_9408669_SNP [dm3] 2R_13521164_SNP [dm6]	T	C	2.302e^-4	0.486	UPSTREAM CG13331 INTRON Vmat	TF binding site BDTNP1_TFBS_twi
2R	4488251	2R_4488251_SNP [dm3] 2R_8600746_SNP [dm6]	C	T	2.303e^-4	0.486	SYNONYMOUS_CODING rgr UPSTREAM CG8735	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	15836358	3L_15836358_SNP [dm3] 3L_15843258_SNP [dm6]	T	A	2.318e^-4	0.486	DOWNSTREAM mir-263b INTRON CG32150	TF binding site mE1_TFBS_HSA
2R	10964801	2R_10964801_SNP [dm3] 2R_15077296_SNP [dm6]	C	T	2.319e^-4	0.486	INTERGENIC
3R	20662391	3R_20662391_SNP [dm3] 3R_24836669_SNP [dm6]	C	G	2.320e^-4	0.486	UPSTREAM sosie DOWNSTREAM CR45216 INTRON sosie
3R	19653530	3R_19653530_SNP [dm3] 3R_23827808_SNP [dm6]	A	C	2.321e^-4	0.486	UPSTREAM snRNA:U1:95Cb INTRON CG34355	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4010981	2L_4010981_DEL [dm3] 2L_4010981_DEL [dm6]	CAC	A	2.327e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	24162448	3R_24162448_SNP [dm3] 3R_28336726_SNP [dm6]	C	G	2.328e^-4	0.486	UPSTREAM larp DOWNSTREAM Gfat2 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2R	8326441	2R_8326441_SNP [dm3] 2R_12438936_SNP [dm6]	G	T	2.329e^-4	0.486	INTRON Dyb	TF binding site BDTNP1_TFBS_dl
3R	20661534	3R_20661534_SNP [dm3] 3R_24835812_SNP [dm6]	C	T	2.332e^-4	0.486	UPSTREAM sosie INTRON sosie EXON CR45216	TF binding site BDTNP1_TFBS_dl
2L	15012230	2L_15012230_SNP [dm3] 2L_15012230_SNP [dm6]	C	T	2.337e^-4	0.486	DOWNSTREAM l_2_35Bd EXON CR43856	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	10249811	2L_10249811_SNP [dm3] 2L_10249811_SNP [dm6]	C	G	2.339e^-4	0.486	UPSTREAM bsk & 1 other INTRON bsk	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3R	420879	3R_420879_SNP [dm3] 3R_4595157_SNP [dm6]	G	A	2.343e^-4	0.486	INTERGENIC
2R	16993283	2R_16993283_SNP [dm3] 2R_21105778_SNP [dm6]	A	T	2.343e^-4	0.486	INTRON ktub
2R	7273096	2R_7273096_SNP [dm3] 2R_11385591_SNP [dm6]	G	A	2.343e^-4	0.486	SYNONYMOUS_CODING sprt	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	1563914	3L_1563914_DEL [dm3] 3L_1563914_DEL [dm6]	GA	G	2.343e^-4	0.486	INTRON CG7879	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3R	20928502	3R_20928502_SNP [dm3] 3R_25102780_SNP [dm6]	A	T	2.344e^-4	0.486	NON_SYNONYMOUS_CODING CG45095 DOWNSTREAM CG33095 & 2 others
3R	19042960	3R_19042960_DEL [dm3] 3R_23217238_DEL [dm6]	AAACTAAAAATCAAC...	T	2.346e^-4	0.486	INTRON cnc
3L	3392105	3L_3392105_SNP [dm3] 3L_3392105_SNP [dm6]	T	C	2.348e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	8898719	2L_8898719_SNP [dm3] 2L_8898719_SNP [dm6]	T	C	2.351e^-4	0.486	UPSTREAM CG34398 INTERGENIC	TF binding site mE1_TFBS_Trl
2L	6065297	2L_6065297_SNP [dm3] 2L_6065297_SNP [dm6]	C	T	2.359e^-4	0.486	UPSTREAM CG9147 INTRON Fbw5	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	4813763	2L_4813763_SNP [dm3] 2L_4813763_SNP [dm6]	C	T	2.359e^-4	0.486	INTRON CG15629
3R	20371483	3R_20371483_SNP [dm3] 3R_24545761_SNP [dm6]	C	T	2.364e^-4	0.486	INTRON Esyt2
2L	9281062	2L_9281062_SNP [dm3] 2L_9281062_SNP [dm6]	T	C	2.370e^-4	0.486	INTRON Ggamma30A
3L	3599649	3L_3599649_SNP [dm3] 3L_3599649_SNP [dm6]	C	G	2.376e^-4	0.486	INTRON Eip63E
3R	23798457	3R_23798457_DEL [dm3] 3R_27972735_DEL [dm6]	CCCCAA	C	2.378e^-4	0.486	INTRON betaTub97EF
2L	8794544	2L_8794544_SNP [dm3] 2L_8794544_SNP [dm6]	T	C	2.380e^-4	0.486	INTERGENIC
2R	5761024	2R_5761024_SNP [dm3] 2R_9873519_SNP [dm6]	T	C	2.381e^-4	0.486	UTR_3_PRIME CG18446 INTRON cbx	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3390156	2R_3390156_SNP [dm3] 2R_7502651_SNP [dm6]	A	G	2.382e^-4	0.486	NON_SYNONYMOUS_CODING didum	TF binding site mE1_TFBS_cad
3R	20234998	3R_20234998_SNP [dm3] 3R_24409276_SNP [dm6]	A	G	2.387e^-4	0.486	INTRON nAChRalpha1
2R	18350000	2R_18350000_SNP [dm3] 2R_22462495_SNP [dm6]	G	T	2.390e^-4	0.486	INTRON CG10384	TF binding site mE1_TFBS_chinmo
2R	15782779	2R_15782779_SNP [dm3] 2R_19895274_SNP [dm6]	G	T	2.400e^-4	0.486	INTERGENIC
3L	11167836	3L_11167836_SNP [dm3] 3L_11174736_SNP [dm6]	C	T	2.402e^-4	0.486	NON_SYNONYMOUS_CODING CG14142 SYNONYMOUS_CODING CG14142
3L	3681451	3L_3681451_SNP [dm3] 3L_3681451_SNP [dm6]	C	G	2.405e^-4	0.486	INTERGENIC
3R	19970677	3R_19970677_SNP [dm3] 3R_24144955_SNP [dm6]	T	A	2.406e^-4	0.486	INTRON Kal1	TF binding site mE1_TFBS_chinmo
3R	26734787	3R_26734787_SNP [dm3] 3R_30909065_SNP [dm6]	C	A	2.408e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	10543829	3L_10543829_SNP [dm3] 3L_10550729_SNP [dm6]	G	T	2.408e^-4	0.486	INTRON A2bp1
2R	17616474	2R_17616474_SNP [dm3] 2R_21728969_SNP [dm6]	A	G	2.408e^-4	0.486	UPSTREAM CR44750 INTERGENIC	TF binding site mE1_TFBS_cad
2R	4496050	2R_4496050_SNP [dm3] 2R_8608545_SNP [dm6]	C	T	2.411e^-4	0.486	INTRON rgr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	3822585	X_3822585_SNP [dm3] X_3928552_SNP [dm6]	C	G	2.416e^-4	0.486	INTRON CG42541
2R	17089857	2R_17089857_SNP [dm3] 2R_21202352_SNP [dm6]	A	C	2.419e^-4	0.486	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	3751155	2L_3751155_SNP [dm3] 2L_3751155_SNP [dm6]	G	A	2.422e^-4	0.486	INTRON CG10019
2R	2741681	2R_2741681_SNP [dm3] 2R_6854176_SNP [dm6]	T	C	2.424e^-4	0.486	INTERGENIC
2L	5334687	2L_5334687_SNP [dm3] 2L_5334687_SNP [dm6]	C	A	2.431e^-4	0.486	INTRON fusl
2L	5334691	2L_5334691_SNP [dm3] 2L_5334691_SNP [dm6]	T	C	2.431e^-4	0.486	INTRON fusl
2R	10001895	2R_10001895_SNP [dm3] 2R_14114390_SNP [dm6]	A	T	2.433e^-4	0.486	INTRON Prosap	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
X	17061064	X_17061064_SNP [dm3] X_17167031_SNP [dm6]	T	C	2.436e^-4	0.486	INTRON baz
2R	5605335	2R_5605335_SNP [dm3] 2R_9717830_SNP [dm6]	A	C	2.442e^-4	0.486	SYNONYMOUS_CODING sqa DOWNSTREAM sqa	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo
3L	13228496	3L_13228496_SNP [dm3] 3L_13235396_SNP [dm6]	A	C	2.443e^-4	0.486	INTRON caps
3R	20440372	3R_20440372_INS [dm3] 3R_24614650_INS [dm6]	T	TG	2.443e^-4	0.486	INTRON mld
3R	6937135	3R_6937135_SNP [dm3] 3R_11111413_SNP [dm6]	T	A	2.445e^-4	0.486	INTERGENIC
2L	4813102	2L_4813102_SNP [dm3] 2L_4813102_SNP [dm6]	A	G	2.448e^-4	0.486	START_GAINED CG15629 UTR_5_PRIME CG15629	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3L	4145737	3L_4145737_SNP [dm3] 3L_4145737_SNP [dm6]	A	G	2.449e^-4	0.486	NON_SYNONYMOUS_CODING CG32260	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	20774073	3R_20774073_SNP [dm3] 3R_24948351_SNP [dm6]	C	A	2.449e^-4	0.486	SPLICE_SITE_REGION CG13646 DOWNSTREAM Nmnat INTRON CG13646	TF binding site mE1_TFBS_chinmo
3R	26342926	3R_26342926_DEL [dm3] 3R_30517204_DEL [dm6]	CGCCCACCGCCCCTTCTAAG...	A	2.453e^-4	0.486	UTR_3_PRIME jdp DOWNSTREAM CG9698
3L	5793193	3L_5793193_SNP [dm3] 3L_5800093_SNP [dm6]	C	G	2.453e^-4	0.486	UTR_3_PRIME S6k
X	16740984	X_16740984_SNP [dm3] X_16846951_SNP [dm6]	C	G	2.454e^-4	0.486	SYNONYMOUS_CODING CG13003	TF binding site mE1_TFBS_chinmo
3R	26565481	3R_26565481_SNP [dm3] 3R_30739759_SNP [dm6]	G	A	2.464e^-4	0.486	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	19897367	3R_19897367_SNP [dm3] 3R_24071645_SNP [dm6]	C	A	2.465e^-4	0.486	INTRON 4EHP
2R	11978243	2R_11978243_SNP [dm3] 2R_16090738_SNP [dm6]	G	C	2.470e^-4	0.486	INTRON Dg
3R	25396898	3R_25396898_SNP [dm3] 3R_29571176_SNP [dm6]	G	A	2.472e^-4	0.486	INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	16603108	3R_16603108_SNP [dm3] 3R_20777386_SNP [dm6]	G	C	2.472e^-4	0.486	INTRON Syp	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	17727920	2R_17727920_SNP [dm3] 2R_21840415_SNP [dm6]	G	A	2.473e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	13397301	X_13397301_SNP [dm3] X_13503268_SNP [dm6]	C	G	2.473e^-4	0.486	INTRON Neto
2L	4814566	2L_4814566_SNP [dm3] 2L_4814566_SNP [dm6]	A	T	2.476e^-4	0.486	INTRON CG15629
3L	4791862	3L_4791862_SNP [dm3] 3L_4791862_SNP [dm6]	T	C	2.478e^-4	0.486	SYNONYMOUS_CODING RhoGEF64C	TF binding site BDTNP1_TFBS_Mad mE1_TFBS_chinmo
X	16740948	X_16740948_SNP [dm3] X_16846915_SNP [dm6]	T	C	2.484e^-4	0.486	INTRON CG13003	TF binding site mE1_TFBS_chinmo
X	16740963	X_16740963_SNP [dm3] X_16846930_SNP [dm6]	T	A	2.484e^-4	0.486	INTRON CG13003	TF binding site mE1_TFBS_chinmo
3L	11352042	3L_11352042_DEL [dm3] 3L_11358942_DEL [dm6]	GATGGGTCGGTGGGTCG...	G	2.486e^-4	0.486	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	9412370	2R_9412370_SNP [dm3] 2R_13524865_SNP [dm6]	A	G	2.489e^-4	0.486	UPSTREAM CG13332 INTRON Vmat	TF binding site mE1_TFBS_cad
2R	11798597	2R_11798597_SNP [dm3] 2R_15911092_SNP [dm6]	G	A	2.490e^-4	0.486	INTRON sli	TF binding site mE1_TFBS_HSA
4	1122347	4_1122347_SNP [dm3] 4_1101721_SNP [dm6]	A	T	2.493e^-4	0.486	INTRON sv
3L	3280670	3L_3280670_SNP [dm3] 3L_3280670_SNP [dm6]	G	A	2.498e^-4	0.486	NON_SYNONYMOUS_CODING CG12017
2L	8176606	2L_8176606_SNP [dm3] 2L_8176606_SNP [dm6]	C	A	2.503e^-4	0.486	NON_SYNONYMOUS_CODING Piezo
3R	13591010	3R_13591010_SNP [dm3] 3R_17765288_SNP [dm6]	A	T	2.503e^-4	0.486	INTERGENIC
2L	4104139	2L_4104139_SNP [dm3] 2L_4104139_SNP [dm6]	C	A	2.503e^-4	0.486	INTRON ed
2L	2829096	2L_2829096_SNP [dm3] 2L_2829096_SNP [dm6]	C	A	2.505e^-4	0.486	INTRON Duox	TF binding site BDTNP1_TFBS_dl
2L	6065490	2L_6065490_SNP [dm3] 2L_6065490_SNP [dm6]	G	C	2.506e^-4	0.486	SYNONYMOUS_CODING Fbw5 UPSTREAM CG9147	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	21468088	3R_21468088_DEL [dm3] 3R_25642366_DEL [dm6]	ATAA	A	2.509e^-4	0.486	INTRON jigr1
3R	10501811	3R_10501811_SNP [dm3] 3R_14676089_SNP [dm6]	C	T	2.512e^-4	0.486	INTRON Meltrin	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	2704197	3L_2704197_SNP [dm3] 3L_2704197_SNP [dm6]	G	A	2.515e^-4	0.486	INTRON Fife
2R	10666534	2R_10666534_SNP [dm3] 2R_14779029_SNP [dm6]	G	A	2.523e^-4	0.486	INTRON kn
3R	26056735	3R_26056735_SNP [dm3] 3R_30231013_SNP [dm6]	C	T	2.525e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	5809171	X_5809171_SNP [dm3] X_5915138_SNP [dm6]	C	T	2.527e^-4	0.486	UTR_5_PRIME CG3011 DOWNSTREAM CR44108 INTRON CG3011
2L	11144704	2L_11144704_DEL [dm3] 2L_11144704_DEL [dm6]	AATGCTTGTAGGTACC...	A	2.528e^-4	0.486	UTR_3_PRIME CG31867 DOWNSTREAM CG31867 INTRON Gyc32E
2R	18449615	2R_18449615_SNP [dm3] 2R_22562110_SNP [dm6]	T	A	2.532e^-4	0.486	UPSTREAM CG11362 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2L	15319039	2L_15319039_SNP [dm3] 2L_15319039_SNP [dm6]	G	A	2.536e^-4	0.486	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3R	20661325	3R_20661325_SNP [dm3] 3R_24835603_SNP [dm6]	C	A	2.538e^-4	0.486	UPSTREAM CR45216 & 1 other INTRON sosie	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
X	17337517	X_17337517_SNP [dm3] X_17443484_SNP [dm6]	A	G	2.542e^-4	0.486	INTRON CG12994
3L	1557353	3L_1557353_SNP [dm3] 3L_1557353_SNP [dm6]	T	C	2.547e^-4	0.486	SYNONYMOUS_CODING CG12099 UPSTREAM Pex10	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	881669	2L_881669_SNP [dm3] 2L_881669_SNP [dm6]	G	C	2.549e^-4	0.486	SYNONYMOUS_CODING CG15824	TF binding site mE1_TFBS_cad
X	11283877	X_11283877_SNP [dm3] X_11389844_SNP [dm6]	T	A	2.551e^-4	0.486	UPSTREAM dlg1 DOWNSTREAM dlg1 INTRON dlg1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl
2L	881641	2L_881641_SNP [dm3] 2L_881641_SNP [dm6]	A	C	2.551e^-4	0.486	SPLICE_SITE_REGION CG15824 INTRON CG15824	TF binding site mE1_TFBS_cad
3L	11126744	3L_11126744_SNP [dm3] 3L_11133644_SNP [dm6]	A	T	2.553e^-4	0.486	INTRON CG42575	TF binding site mE1_TFBS_cad
3R	13867841	3R_13867841_SNP [dm3] 3R_18042119_SNP [dm6]	T	C	2.558e^-4	0.486	INTERGENIC
3L	10965381	3L_10965381_SNP [dm3] 3L_10972281_SNP [dm6]	C	T	2.560e^-4	0.486	UPSTREAM CG14147 INTERGENIC
3L	4161204	3L_4161204_INS [dm3] 3L_4161204_INS [dm6]	A	ATTA	2.564e^-4	0.486	UPSTREAM nab DOWNSTREAM mas INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3R	17320769	3R_17320769_SNP [dm3] 3R_21495047_SNP [dm6]	A	G	2.565e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2R	14678507	2R_14678507_SNP [dm3] 2R_18791002_SNP [dm6]	G	A	2.571e^-4	0.486	SYNONYMOUS_CODING CG15080	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	5369485	3R_5369485_SNP [dm3] 3R_9543763_SNP [dm6]	C	T	2.575e^-4	0.486	INTRON mura	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	7534197	3L_7534197_SNP [dm3] 3L_7541097_SNP [dm6]	C	G	2.578e^-4	0.486	NON_SYNONYMOUS_CODING CG32374 DOWNSTREAM CG32376
2R	6786869	2R_6786869_SNP [dm3] 2R_10899364_SNP [dm6]	T	A	2.578e^-4	0.486	UPSTREAM Rpb5 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	18890022	2L_18890022_SNP [dm3] 2L_18890022_SNP [dm6]	G	A	2.579e^-4	0.486	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2R	5214618	2R_5214618_SNP [dm3] 2R_9327113_SNP [dm6]	A	C	2.581e^-4	0.486	INTRON CG13954 & 1 other
X	5538875	X_5538875_SNP [dm3] X_5644842_SNP [dm6]	C	T	2.581e^-4	0.486	INTRON CG42492
2R	17727938	2R_17727938_SNP [dm3] 2R_21840433_SNP [dm6]	A	G	2.581e^-4	0.486	INTERGENIC
X	9285669	X_9285669_SNP [dm3] X_9391636_SNP [dm6]	T	C	2.582e^-4	0.486	INTRON mgl
X	4956410	X_4956410_SNP [dm3] X_5062377_SNP [dm6]	G	A	2.583e^-4	0.486	INTRON CR44833 & 1 other	TF binding site BDTNP1_TFBS_dl
2L	4809965	2L_4809965_SNP [dm3] 2L_4809965_SNP [dm6]	G	T	2.585e^-4	0.486	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2R	5680270	2R_5680270_SNP [dm3] 2R_9792765_SNP [dm6]	A	T	2.587e^-4	0.486	UPSTREAM CG1698 INTRON CG1688
3R	21518163	3R_21518163_SNP [dm3] 3R_25692441_SNP [dm6]	G	A	2.594e^-4	0.486	INTERGENIC
2R	7005673	2R_7005673_SNP [dm3] 2R_11118168_SNP [dm6]	C	A	2.597e^-4	0.486	UTR_3_PRIME Cyp12d1-p
X	8706733	X_8706733_INS [dm3] X_8812700_INS [dm6]	A	ATTGTA	2.598e^-4	0.486	INTERGENIC
4	110152	4_110152_DEL [dm3] 4_89526_DEL [dm6]	GATTAG	G	2.604e^-4	0.486	UPSTREAM pan INTRON pan	TF binding site mE1_TFBS_bab1
2L	5296010	2L_5296010_SNP [dm3] 2L_5296010_SNP [dm6]	T	C	2.605e^-4	0.486	INTRON vri
3R	27169580	3R_27169580_SNP [dm3] 3R_31343858_SNP [dm6]	T	C	2.605e^-4	0.486	INTRON CG34347

By genomic position
Variant impact
Gene name

5μg/mL survivorship phenotype phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results