©2022-2026 Deplancke lab, EPFL, 1015 Lausanne
2024-06-03
Everything is now Dockerized in a single Docker. Even the GWAS R script and the job daemon.
Corrected a few bugs in the Tools > Check your phenotype
Added the "Genes" tab and functionalities
https://github.com/DeplanckeLab/dgrpool_web/releases/tag/v0.1.0
plink2 --threads 64 --glm hide-covar --quantile-normalize --variance-standardize --geno 0.2 --maf 0.01 --covar /data/gardeux/DGRPool/dgrp.cov.tsv --bfile /data/gardeux/DGRPool/dgrp2 --pheno GWAS/my.pheno.plink2.tsv --out GWAS_full_results/| Description | Filename | |
|---|---|---|
| DGRP lines (TSV) | dgrp_lines.tsv | Download |
| Phenotypes (TSV) | phenotypes.tsv | Download |
| Studies (TSV) | studies.tsv | Download |
| All phenotype mean (numerical) data by sex (TSV) | all_phenotype_mean_data.tsv | Download |
| GWAS results | gwas.tar.gz | Download |