DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=4.930e^-2)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_3R_P	0.0009318

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_3R_P	13.598	0.0011

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2966 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2R	11580064	2R_11580064_SNP [dm3] 2R_15692559_SNP [dm6]	A	C	1.190e^-6	0.449	NON_SYNONYMOUS_CODING CG30087 DOWNSTREAM CG30088 EXON CR44372
2L	12272691	2L_12272691_INS [dm3] 2L_12272691_INS [dm6]	A	ATA	1.713e^-6	0.449	INTRON aret
3L	12875986	3L_12875986_SNP [dm3] 3L_12882886_SNP [dm6]	T	C	1.729e^-6	0.449	INTERGENIC
2R	12282447	2R_12282447_SNP [dm3] 2R_16394942_SNP [dm6]	G	A	2.577e^-6	0.449	INTRON Sema-2b
2R	13906501	2R_13906501_SNP [dm3] 2R_18018996_SNP [dm6]	A	C	2.713e^-6	0.449	INTRON CG5084
3L	13789012	3L_13789012_SNP [dm3] 3L_13795912_SNP [dm6]	C	T	2.870e^-6	0.449	INTRON bru-3
3L	13789013	3L_13789013_SNP [dm3] 3L_13795913_SNP [dm6]	C	T	2.870e^-6	0.449	INTRON bru-3
2R	10917425	2R_10917425_SNP [dm3] 2R_15029920_SNP [dm6]	A	G	3.016e^-6	0.449	INTRON hbs	TF binding site BDTNP1_TFBS_hb mE1_TFBS_cad
3L	12839968	3L_12839968_SNP [dm3] 3L_12846868_SNP [dm6]	A	C	3.176e^-6	0.449	INTRON CG10948	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2R	17107284	2R_17107284_SNP [dm3] 2R_21219779_SNP [dm6]	G	A	3.645e^-6	0.449	SYNONYMOUS_CODING ASPP	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
X	2105839	X_2105839_SNP [dm3] X_2211806_SNP [dm6]	G	T	3.829e^-6	0.449	INTRON msta
3L	5880498	3L_5880498_SNP [dm3] 3L_5887398_SNP [dm6]	C	G	4.123e^-6	0.449	INTERGENIC
X	15505151	X_15505151_SNP [dm3] X_15611118_SNP [dm6]	A	G	4.277e^-6	0.449	INTRON sog	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	12875890	3L_12875890_SNP [dm3] 3L_12882790_SNP [dm6]	T	C	4.296e^-6	0.449	INTERGENIC
2R	19719975	2R_19719975_SNP [dm3] 2R_23832452_SNP [dm6]	C	G	4.303e^-6	0.449	INTRON CG5549
2R	13906509	2R_13906509_INS [dm3] 2R_18019004_INS [dm6]	A	AGCTATGCCAGAA...	4.750e^-6	0.449	INTRON CG5084
2R	19312397	2R_19312397_SNP [dm3] 2R_23424874_SNP [dm6]	G	A	4.768e^-6	0.449	INTRON CG9815
3R	14169264	3R_14169264_SNP [dm3] 3R_18343542_SNP [dm6]	A	G	4.988e^-6	0.449	INTRON CG15803
3R	13854142	3R_13854142_SNP [dm3] 3R_18028420_SNP [dm6]	C	T	5.311e^-6	0.449	INTERGENIC
2L	7665675	2L_7665675_SNP [dm3] 2L_7665675_SNP [dm6]	A	G	5.343e^-6	0.449	UPSTREAM Myo28B1 INTRON Slob
2L	8390856	2L_8390856_SNP [dm3] 2L_8390856_SNP [dm6]	T	G	5.665e^-6	0.449	SYNONYMOUS_CODING CG42820	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3840696	2R_3840696_SNP [dm3] 2R_7953191_SNP [dm6]	G	T	5.811e^-6	0.449	INTRON CG14764
3L	12875918	3L_12875918_SNP [dm3] 3L_12882818_SNP [dm6]	A	C	5.875e^-6	0.449	INTERGENIC
X	14681272	X_14681272_SNP [dm3] X_14787239_SNP [dm6]	G	T	6.038e^-6	0.449	UPSTREAM Ag5r DOWNSTREAM rut EXON CR45522
2R	12627802	2R_12627802_SNP [dm3] 2R_16740297_SNP [dm6]	T	C	6.684e^-6	0.449	INTERGENIC
X	15505086	X_15505086_SNP [dm3] X_15611053_SNP [dm6]	T	G	6.935e^-6	0.449	INTRON sog	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	11568376	3L_11568376_SNP [dm3] 3L_11575276_SNP [dm6]	C	G	7.016e^-6	0.449	SYNONYMOUS_CODING CG33489 UPSTREAM CG33490	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	1851422	3L_1851422_SNP [dm3] 3L_1851422_SNP [dm6]	G	C	8.120e^-6	0.449	INTRON CG13936
3L	5717704	3L_5717704_SNP [dm3] 3L_5724604_SNP [dm6]	G	T	8.123e^-6	0.449	INTRON sif
3L	5880499	3L_5880499_SNP [dm3] 3L_5887399_SNP [dm6]	T	A	8.272e^-6	0.449	INTERGENIC
2L	12272668	2L_12272668_SNP [dm3] 2L_12272668_SNP [dm6]	G	T	8.373e^-6	0.449	INTRON aret
3R	25141654	3R_25141654_SNP [dm3] 3R_29315932_SNP [dm6]	T	C	8.606e^-6	0.449	INTRON Cnx99A
2R	12282492	2R_12282492_SNP [dm3] 2R_16394987_SNP [dm6]	A	G	8.755e^-6	0.449	INTRON Sema-2b
3L	12876117	3L_12876117_SNP [dm3] 3L_12883017_SNP [dm6]	C	A	8.766e^-6	0.449	INTERGENIC
3R	25141651	3R_25141651_SNP [dm3] 3R_29315929_SNP [dm6]	T	C	9.250e^-6	0.449	INTRON Cnx99A
2L	10273936	2L_10273936_SNP [dm3] 2L_10273936_SNP [dm6]	C	T	9.291e^-6	0.449	INTRON Utx
2R	10281424	2R_10281424_DEL [dm3] 2R_14393919_DEL [dm6]	CGGCTTTAAGGGATAAAAAT...	C	9.617e^-6	0.449	INTERGENIC
2L	10054421	2L_10054421_SNP [dm3] 2L_10054421_SNP [dm6]	G	A	9.865e^-6	0.449	DOWNSTREAM CR44875 INTRON Cpr31A
X	15125193	X_15125193_SNP [dm3] X_15231160_SNP [dm6]	C	A	1.028e^-5	0.449	INTERGENIC
X	8433755	X_8433755_SNP [dm3] X_8539722_SNP [dm6]	A	G	1.058e^-5	0.449	INTRON Nrg
X	6678498	X_6678498_SNP [dm3] X_6784465_SNP [dm6]	C	T	1.063e^-5	0.449	NON_SYNONYMOUS_CODING C3G	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	12839957	3L_12839957_SNP [dm3] 3L_12846857_SNP [dm6]	A	T	1.091e^-5	0.449	INTRON CG10948	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2L	11777322	2L_11777322_SNP [dm3] 2L_11777322_SNP [dm6]	G	A	1.092e^-5	0.449	INTERGENIC
3L	12875919	3L_12875919_SNP [dm3] 3L_12882819_SNP [dm6]	T	A	1.121e^-5	0.449	INTERGENIC
3R	14974114	3R_14974114_SNP [dm3] 3R_19148392_SNP [dm6]	A	G	1.122e^-5	0.449	UPSTREAM Ppcs & 1 other DOWNSTREAM CG5835 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Ubx
2R	8990694	2R_8990694_SNP [dm3] 2R_13103189_SNP [dm6]	G	C	1.125e^-5	0.449	UPSTREAM CG44341 INTERGENIC
2R	3840694	2R_3840694_SNP [dm3] 2R_7953189_SNP [dm6]	T	A	1.161e^-5	0.449	INTRON CG14764
2R	13906362	2R_13906362_SNP [dm3] 2R_18018857_SNP [dm6]	A	G	1.167e^-5	0.449	INTRON CG5084
2R	12282481	2R_12282481_SNP [dm3] 2R_16394976_SNP [dm6]	T	C	1.173e^-5	0.449	INTRON Sema-2b
2R	11580013	2R_11580013_SNP [dm3] 2R_15692508_SNP [dm6]	G	A	1.201e^-5	0.451	NON_SYNONYMOUS_CODING CG30087 DOWNSTREAM CG30088 EXON CR44372
3R	8204019	3R_8204019_SNP [dm3] 3R_12378297_SNP [dm6]	A	C	1.234e^-5	0.454	UPSTREAM GstD7 DOWNSTREAM GstD6 INTERGENIC
2L	2389583	2L_2389583_SNP [dm3] 2L_2389583_SNP [dm6]	A	G	1.387e^-5	0.5	UTR_3_PRIME CG43750 DOWNSTREAM CG43750
2R	6653166	2R_6653166_SNP [dm3] 2R_10765661_SNP [dm6]	C	T	1.479e^-5	0.518	INTRON CG33144
2R	16737013	2R_16737013_SNP [dm3] 2R_20849508_SNP [dm6]	C	T	1.513e^-5	0.518	DOWNSTREAM CG9993 INTRON CG17999	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	12098534	3L_12098534_SNP [dm3] 3L_12105434_SNP [dm6]	C	G	1.519e^-5	0.518	INTERGENIC
3L	16231793	3L_16231793_SNP [dm3] 3L_16238693_SNP [dm6]	T	C	1.550e^-5	0.518	SYNONYMOUS_CODING l_3_72Dr	TF binding site mE1_TFBS_cad
2R	18874046	2R_18874046_SNP [dm3] 2R_22986523_SNP [dm6]	G	C	1.573e^-5	0.518	UPSTREAM CG9897 INTRON twi EXON CR42742
2R	16935701	2R_16935701_SNP [dm3] 2R_21048196_SNP [dm6]	T	C	1.609e^-5	0.52	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
X	8634422	X_8634422_SNP [dm3] X_8740389_SNP [dm6]	T	A	1.786e^-5	0.555	INTERGENIC
3R	7095408	3R_7095408_SNP [dm3] 3R_11269686_SNP [dm6]	A	T	1.820e^-5	0.555	EXON CR31386	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	9744284	2R_9744284_SNP [dm3] 2R_13856779_SNP [dm6]	A	G	1.861e^-5	0.555	SYNONYMOUS_CODING tum DOWNSTREAM CR44367	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	10901572	3L_10901572_SNP [dm3] 3L_10908472_SNP [dm6]	C	T	1.872e^-5	0.555	INTERGENIC
3L	5713040	3L_5713040_SNP [dm3] 3L_5719940_SNP [dm6]	G	A	1.920e^-5	0.555	UPSTREAM snoRNA:Me18S-A1494 INTRON sif
3R	25142637	3R_25142637_SNP [dm3] 3R_29316915_SNP [dm6]	G	A	1.939e^-5	0.555	SPLICE_SITE_REGION Cnx99A INTRON Cnx99A	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
2R	18841412	2R_18841412_SNP [dm3] 2R_22953889_SNP [dm6]	T	C	1.964e^-5	0.555	UPSTREAM CR32835 INTERGENIC
3R	19499155	3R_19499155_SNP [dm3] 3R_23673433_SNP [dm6]	T	A	2.011e^-5	0.555	INTERGENIC
3L	13351847	3L_13351847_SNP [dm3] 3L_13358747_SNP [dm6]	C	T	2.053e^-5	0.555	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	4790653	3L_4790653_SNP [dm3] 3L_4790653_SNP [dm6]	G	A	2.058e^-5	0.555	SYNONYMOUS_CODING RhoGEF64C	TF binding site mE1_TFBS_chinmo
2L	10079342	2L_10079342_SNP [dm3] 2L_10079342_SNP [dm6]	A	G	2.070e^-5	0.555	INTRON CG44153
3L	13927463	3L_13927463_SNP [dm3] 3L_13934363_SNP [dm6]	A	T	2.071e^-5	0.555	UTR_3_PRIME Gl	TF binding site mE1_TFBS_cad
3R	13980325	3R_13980325_SNP [dm3] 3R_18154603_SNP [dm6]	A	G	2.145e^-5	0.56	DOWNSTREAM CG14316 INTERGENIC
3L	12774926	3L_12774926_SNP [dm3] 3L_12781826_SNP [dm6]	A	T	2.149e^-5	0.56	NON_SYNONYMOUS_CODING CG17666 UPSTREAM CG10969
3L	7317463	3L_7317463_SNP [dm3] 3L_7324363_SNP [dm6]	C	A	2.306e^-5	0.571	NON_SYNONYMOUS_CODING Rint1 UPSTREAM RhoGEF4
2L	12994612	2L_12994612_SNP [dm3] 2L_12994612_SNP [dm6]	G	T	2.312e^-5	0.571	INTRON CG12404
2R	16282465	2R_16282465_SNP [dm3] 2R_20394960_SNP [dm6]	T	C	2.378e^-5	0.571	INTERGENIC
3L	13355584	3L_13355584_SNP [dm3] 3L_13362484_SNP [dm6]	A	C	2.390e^-5	0.571	INTERGENIC
3R	14169204	3R_14169204_SNP [dm3] 3R_18343482_SNP [dm6]	T	C	2.410e^-5	0.571	INTRON CG15803
3L	5590806	3L_5590806_SNP [dm3] 3L_5597706_SNP [dm6]	T	C	2.416e^-5	0.571	DOWNSTREAM CG5150 & 1 other INTERGENIC
3L	16767741	3L_16767741_SNP [dm3] 3L_16774641_SNP [dm6]	C	G	2.418e^-5	0.571	SYNONYMOUS_CODING Nrt	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	10281175	2R_10281175_SNP [dm3] 2R_14393670_SNP [dm6]	C	G	2.437e^-5	0.571	INTERGENIC
2R	10917298	2R_10917298_SNP [dm3] 2R_15029793_SNP [dm6]	A	G	2.500e^-5	0.573	INTRON hbs	TF binding site mE1_TFBS_cad
2R	3836695	2R_3836695_SNP [dm3] 2R_7949190_SNP [dm6]	A	C	2.524e^-5	0.573	UPSTREAM CG11165 INTRON CG14764	TF binding site BDTNP1_TFBS_da
2L	12994576	2L_12994576_SNP [dm3] 2L_12994576_SNP [dm6]	C	A	2.596e^-5	0.573	INTRON CG12404
3R	14169212	3R_14169212_SNP [dm3] 3R_18343490_SNP [dm6]	T	A	2.621e^-5	0.573	INTRON CG15803
2L	5855604	2L_5855604_SNP [dm3] 2L_5855604_SNP [dm6]	T	C	2.653e^-5	0.573	INTRON TrissinR
3L	5344684	3L_5344684_SNP [dm3] 3L_5351584_SNP [dm6]	C	G	2.664e^-5	0.573	UPSTREAM lama INTRON lama
3L	12098550	3L_12098550_SNP [dm3] 3L_12105450_SNP [dm6]	C	A	2.726e^-5	0.573	INTERGENIC
2L	8217978	2L_8217978_SNP [dm3] 2L_8217978_SNP [dm6]	A	G	2.733e^-5	0.573	UTR_5_PRIME CG8292 DOWNSTREAM Snx6	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	18386849	X_18386849_SNP [dm3] X_18492816_SNP [dm6]	G	A	2.759e^-5	0.573	UPSTREAM CG15044 DOWNSTREAM CG15043 INTERGENIC
2R	8984401	2R_8984401_SNP [dm3] 2R_13096896_SNP [dm6]	T	A	2.931e^-5	0.573	INTERGENIC
2R	15430753	2R_15430753_SNP [dm3] 2R_19543248_SNP [dm6]	A	G	2.956e^-5	0.573	INTRON sm	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
2R	15430459	2R_15430459_SNP [dm3] 2R_19542954_SNP [dm6]	C	T	2.963e^-5	0.573	INTRON sm	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	2337351	2L_2337351_SNP [dm3] 2L_2337351_SNP [dm6]	A	G	3.145e^-5	0.573	INTRON CG9967 & 1 other
3L	5273681	3L_5273681_SNP [dm3] 3L_5280581_SNP [dm6]	G	C	3.184e^-5	0.573	INTERGENIC
3R	19499582	3R_19499582_SNP [dm3] 3R_23673860_SNP [dm6]	G	C	3.228e^-5	0.573	INTERGENIC	TF binding site mE1_TFBS_inv
2L	16042145	2L_16042145_SNP [dm3] 2L_16042145_SNP [dm6]	T	C	3.241e^-5	0.573	UTR_5_PRIME BicC & 1 other UPSTREAM BicC & 1 other DOWNSTREAM beat-Ic	TF binding site BDTNP1_TFBS_twi
X	8433696	X_8433696_SNP [dm3] X_8539663_SNP [dm6]	C	T	3.254e^-5	0.573	INTRON Nrg
2R	8990693	2R_8990693_SNP [dm3] 2R_13103188_SNP [dm6]	C	G	3.263e^-5	0.573	UPSTREAM CG44341 INTERGENIC
2R	10281171	2R_10281171_SNP [dm3] 2R_14393666_SNP [dm6]	A	G	3.308e^-5	0.573	INTERGENIC
3L	7065826	3L_7065826_SNP [dm3] 3L_7072726_SNP [dm6]	A	C	3.342e^-5	0.573	DOWNSTREAM CG34030 INTRON CG8641	TF binding site mE1_TFBS_inv
2R	10524140	2R_10524140_SNP [dm3] 2R_14636635_SNP [dm6]	C	T	3.343e^-5	0.573	INTERGENIC
2R	16981070	2R_16981070_SNP [dm3] 2R_21093565_SNP [dm6]	G	A	3.355e^-5	0.573	INTRON CG34396
3L	5132446	3L_5132446_SNP [dm3] 3L_5139346_SNP [dm6]	T	C	3.433e^-5	0.573	SYNONYMOUS_CODING Prpk UPSTREAM CHMP2B DOWNSTREAM CG4611	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA
2R	12682932	2R_12682932_SNP [dm3] 2R_16795427_SNP [dm6]	C	T	3.450e^-5	0.573	INTRON CG15615
3L	5649384	3L_5649384_SNP [dm3] 3L_5656284_SNP [dm6]	C	A	3.466e^-5	0.573	INTRON lin-28	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2L	13529927	2L_13529927_SNP [dm3] 2L_13529927_SNP [dm6]	C	T	3.496e^-5	0.573	UPSTREAM CG33642 DOWNSTREAM CG33641 INTRON B4
2R	10281211	2R_10281211_SNP [dm3] 2R_14393706_SNP [dm6]	C	G	3.540e^-5	0.573	INTERGENIC
2L	12331894	2L_12331894_SNP [dm3] 2L_12331894_SNP [dm6]	A	T	3.553e^-5	0.573	INTERGENIC
X	8433732	X_8433732_SNP [dm3] X_8539699_SNP [dm6]	G	T	3.620e^-5	0.573	INTRON Nrg
2L	9890550	2L_9890550_SNP [dm3] 2L_9890550_SNP [dm6]	G	A	3.629e^-5	0.573	SYNONYMOUS_CODING CG34183 UPSTREAM CG4537 DOWNSTREAM FKBP59 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
X	6678080	X_6678080_SNP [dm3] X_6784047_SNP [dm6]	C	T	3.635e^-5	0.573	SYNONYMOUS_CODING C3G	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	14627657	3R_14627657_SNP [dm3] 3R_18801935_SNP [dm6]	C	T	3.676e^-5	0.573	UTR_3_PRIME CG18208
3L	13784897	3L_13784897_SNP [dm3] 3L_13791797_SNP [dm6]	A	C	3.693e^-5	0.573	INTRON bru-3
2L	16762818	2L_16762818_SNP [dm3] 2L_16762818_SNP [dm6]	C	A	3.733e^-5	0.573	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	12049501	2L_12049501_SNP [dm3] 2L_12049501_SNP [dm6]	G	A	3.773e^-5	0.573	UTR_5_PRIME CG14945 UPSTREAM CG14945 & 1 other
3L	13784898	3L_13784898_SNP [dm3] 3L_13791798_SNP [dm6]	G	A	3.776e^-5	0.573	INTRON bru-3
3R	25142636	3R_25142636_SNP [dm3] 3R_29316914_SNP [dm6]	T	A	3.781e^-5	0.573	INTRON Cnx99A	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
2R	11625040	2R_11625040_SNP [dm3] 2R_15737535_SNP [dm6]	G	C	3.829e^-5	0.573	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	1677444	2L_1677444_SNP [dm3] 2L_1677444_SNP [dm6]	T	C	3.843e^-5	0.573	INTRON chinmo
2L	5787358	2L_5787358_SNP [dm3] 2L_5787358_SNP [dm6]	C	T	3.874e^-5	0.573	INTRON CG9171
X	19977137	X_19977137_SNP [dm3] X_20083104_SNP [dm6]	A	G	3.917e^-5	0.573	INTERGENIC
X	5249669	X_5249669_SNP [dm3] X_5355636_SNP [dm6]	A	G	3.966e^-5	0.573	INTRON SK
X	8433765	X_8433765_SNP [dm3] X_8539732_SNP [dm6]	T	A	4.018e^-5	0.573	INTRON Nrg
3L	16931048	3L_16931048_SNP [dm3] 3L_16937948_SNP [dm6]	T	A	4.043e^-5	0.573	DOWNSTREAM CG13022 INTERGENIC
3L	5880514	3L_5880514_SNP [dm3] 3L_5887414_SNP [dm6]	T	A	4.056e^-5	0.573	INTERGENIC
3L	12774925	3L_12774925_SNP [dm3] 3L_12781825_SNP [dm6]	A	G	4.118e^-5	0.573	NON_SYNONYMOUS_CODING CG17666 UPSTREAM CG10969
2L	12331905	2L_12331905_SNP [dm3] 2L_12331905_SNP [dm6]	G	A	4.132e^-5	0.573	INTERGENIC
X	6803494	X_6803494_SNP [dm3] X_6909461_SNP [dm6]	T	A	4.179e^-5	0.573	INTRON CG14431
2R	6653275	2R_6653275_SNP [dm3] 2R_10765770_SNP [dm6]	C	T	4.197e^-5	0.573	INTRON CG33144
2L	2249813	2L_2249813_SNP [dm3] 2L_2249813_SNP [dm6]	T	A	4.245e^-5	0.573	DOWNSTREAM Ser12 INTERGENIC
3L	5649252	3L_5649252_SNP [dm3] 3L_5656152_SNP [dm6]	C	T	4.248e^-5	0.573	INTRON lin-28	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2L	4893404	2L_4893404_SNP [dm3] 2L_4893404_SNP [dm6]	C	A	4.304e^-5	0.573	INTRON CG3036	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16165143	X_16165143_SNP [dm3] X_16271110_SNP [dm6]	T	A	4.329e^-5	0.573	UPSTREAM Mfe2 INTRON kat80 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens
2R	10280036	2R_10280036_DEL [dm3] 2R_14392531_DEL [dm6]	AA	G	4.335e^-5	0.573	DOWNSTREAM CG10104 INTERGENIC
2L	11484375	2L_11484375_SNP [dm3] 2L_11484375_SNP [dm6]	T	C	4.380e^-5	0.573	UPSTREAM CG43355 & 1 other INTERGENIC
X	8433736	X_8433736_SNP [dm3] X_8539703_SNP [dm6]	C	G	4.390e^-5	0.573	INTRON Nrg
3L	5418019	3L_5418019_SNP [dm3] 3L_5424919_SNP [dm6]	C	A	4.428e^-5	0.573	INTRON CG34391
3L	13388137	3L_13388137_SNP [dm3] 3L_13395037_SNP [dm6]	C	A	4.446e^-5	0.573	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
2L	7452015	2L_7452015_SNP [dm3] 2L_7452015_SNP [dm6]	T	G	4.474e^-5	0.573	UPSTREAM santa-maria DOWNSTREAM Gr28a INTERGENIC	TF binding site BDTNP1_TFBS_ftz mE1_TFBS_HSA
2R	8984745	2R_8984745_SNP [dm3] 2R_13097240_SNP [dm6]	G	A	4.482e^-5	0.573	INTERGENIC
2R	9346146	2R_9346146_SNP [dm3] 2R_13458641_SNP [dm6]	G	A	4.502e^-5	0.573	NON_SYNONYMOUS_CODING arr	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	13803606	3R_13803606_SNP [dm3] 3R_17977884_SNP [dm6]	C	A	4.529e^-5	0.573	INTRON cpo
2R	18166067	2R_18166067_INS [dm3] 2R_22278562_INS [dm6]	G	GTG	4.544e^-5	0.573	INTRON dve
3L	1119734	3L_1119734_SNP [dm3] 3L_1119734_SNP [dm6]	T	A	4.557e^-5	0.573	INTERGENIC	TF binding site mE1_TFBS_cad
X	16164857	X_16164857_SNP [dm3] X_16270824_SNP [dm6]	G	A	4.655e^-5	0.573	UPSTREAM Mfe2 INTRON kat80	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_jumu
3L	9810969	3L_9810969_SNP [dm3] 3L_9817869_SNP [dm6]	G	T	4.657e^-5	0.573	INTRON CG43897
2L	11743638	2L_11743638_SNP [dm3] 2L_11743638_SNP [dm6]	T	C	4.730e^-5	0.573	SYNONYMOUS_CODING Vha100-5 DOWNSTREAM CR44144
3R	19499134	3R_19499134_SNP [dm3] 3R_23673412_SNP [dm6]	T	G	4.769e^-5	0.573	INTERGENIC
3R	14169182	3R_14169182_SNP [dm3] 3R_18343460_SNP [dm6]	C	T	4.791e^-5	0.573	INTRON CG15803
2L	12994588	2L_12994588_SNP [dm3] 2L_12994588_SNP [dm6]	A	G	4.816e^-5	0.573	INTRON CG12404
X	2105859	X_2105859_SNP [dm3] X_2211826_SNP [dm6]	A	C	4.836e^-5	0.573	INTRON msta
X	15149416	X_15149416_SNP [dm3] X_15255383_SNP [dm6]	G	A	4.849e^-5	0.573	INTERGENIC
2R	13887413	2R_13887413_SNP [dm3] 2R_17999908_SNP [dm6]	A	T	4.852e^-5	0.573	INTRON dpr13
3L	12073733	3L_12073733_SNP [dm3] 3L_12080633_SNP [dm6]	T	C	4.864e^-5	0.573	INTRON Sema-5c	TF binding site BDTNP1_TFBS_Med
2R	10287772	2R_10287772_SNP [dm3] 2R_14400267_SNP [dm6]	T	G	4.928e^-5	0.573	INTERGENIC
2L	9766707	2L_9766707_SNP [dm3] 2L_9766707_SNP [dm6]	A	G	4.986e^-5	0.573	NON_SYNONYMOUS_CODING ppk18 UPSTREAM CG4017
2R	13906462	2R_13906462_SNP [dm3] 2R_18018957_SNP [dm6]	T	C	5.083e^-5	0.573	INTRON CG5084
3L	18366462	3L_18366462_SNP [dm3] 3L_18373362_SNP [dm6]	G	C	5.091e^-5	0.573	INTERGENIC
2L	12489590	2L_12489590_SNP [dm3] 2L_12489590_SNP [dm6]	T	C	5.144e^-5	0.573	INTRON bun	TF binding site BDTNP1_TFBS_twi
3R	9634670	3R_9634670_SNP [dm3] 3R_13808948_SNP [dm6]	C	T	5.193e^-5	0.573	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	8433767	X_8433767_SNP [dm3] X_8539734_SNP [dm6]	T	G	5.204e^-5	0.573	INTRON Nrg
3L	11624009	3L_11624009_SNP [dm3] 3L_11630909_SNP [dm6]	G	C	5.205e^-5	0.573	UPSTREAM CG32091 DOWNSTREAM CG18815 INTERGENIC
3L	1119764	3L_1119764_SNP [dm3] 3L_1119764_SNP [dm6]	G	T	5.221e^-5	0.573	INTERGENIC	TF binding site mE1_TFBS_cad
2R	8853561	2R_8853561_SNP [dm3] 2R_12966056_SNP [dm6]	A	C	5.221e^-5	0.573	UTR_3_PRIME Psc DOWNSTREAM Psc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26318171	3R_26318171_SNP [dm3] 3R_30492449_SNP [dm6]	T	C	5.262e^-5	0.573	SYNONYMOUS_CODING PH4alphaMP DOWNSTREAM PH4alphaSG2
2R	15427566	2R_15427566_SNP [dm3] 2R_19540061_SNP [dm6]	T	C	5.299e^-5	0.573	INTRON sm
3L	4791041	3L_4791041_SNP [dm3] 3L_4791041_SNP [dm6]	G	A	5.350e^-5	0.573	NON_SYNONYMOUS_CODING RhoGEF64C	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	8004768	2R_8004768_SNP [dm3] 2R_12117263_SNP [dm6]	G	A	5.374e^-5	0.573	SYNONYMOUS_CODING jeb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	17887927	2R_17887927_SNP [dm3] 2R_22000422_SNP [dm6]	C	T	5.390e^-5	0.573	INTRON CG34370
2L	7665659	2L_7665659_SNP [dm3] 2L_7665659_SNP [dm6]	C	G	5.395e^-5	0.573	UPSTREAM Myo28B1 INTRON Slob
3L	13357034	3L_13357034_INS [dm3] 3L_13363934_INS [dm6]	G	GTCTTGAACC	5.431e^-5	0.573	INTERGENIC
3L	9477460	3L_9477460_SNP [dm3] 3L_9484360_SNP [dm6]	C	T	5.617e^-5	0.573	SYNONYMOUS_CODING Jarid2	TF binding site mE1_TFBS_sens
3L	14333632	3L_14333632_SNP [dm3] 3L_14340532_SNP [dm6]	G	C	5.644e^-5	0.573	INTRON fz	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	16165870	X_16165870_SNP [dm3] X_16271837_SNP [dm6]	A	G	5.647e^-5	0.573	SYNONYMOUS_CODING Mfe2 INTRON kat80	TF binding site mE1_TFBS_sens
3L	14379034	3L_14379034_SNP [dm3] 3L_14385934_SNP [dm6]	G	T	5.647e^-5	0.573	INTERGENIC
2R	11626726	2R_11626726_SNP [dm3] 2R_15739221_SNP [dm6]	G	A	5.664e^-5	0.573	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	16388173	2R_16388173_DEL [dm3] 2R_20500668_DEL [dm6]	GT	C	5.716e^-5	0.573	INTERGENIC	regulatory region REDfly_CRMs
2L	8612293	2L_8612293_SNP [dm3] 2L_8612293_SNP [dm6]	C	T	5.734e^-5	0.573	INTRON Sema-1a
3L	3411889	3L_3411889_SNP [dm3] 3L_3411889_SNP [dm6]	T	A	5.741e^-5	0.573	DOWNSTREAM mir-2282 INTRON sty	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA
3L	4754783	3L_4754783_SNP [dm3] 3L_4754783_SNP [dm6]	T	A	5.809e^-5	0.573	UPSTREAM CR43881 INTRON RhoGEF64C
2L	16755596	2L_16755596_SNP [dm3] 2L_16755596_SNP [dm6]	C	T	5.816e^-5	0.573	INTRON yellow-b
3R	11439167	3R_11439167_SNP [dm3] 3R_15613445_SNP [dm6]	C	T	5.845e^-5	0.573	INTERGENIC
2R	6942208	2R_6942208_SNP [dm3] 2R_11054703_SNP [dm6]	T	C	5.861e^-5	0.573	INTRON luna
2L	2058310	2L_2058310_SNP [dm3] 2L_2058310_SNP [dm6]	T	C	5.863e^-5	0.573	DOWNSTREAM dpr3 & 1 other INTERGENIC
2R	10280921	2R_10280921_INS [dm3] 2R_14393416_INS [dm6]	T	TT	5.872e^-5	0.573	INTERGENIC
2L	8390809	2L_8390809_SNP [dm3] 2L_8390809_SNP [dm6]	A	G	6.004e^-5	0.573	NON_SYNONYMOUS_CODING CG42820 DOWNSTREAM snRNA:U6atac:29B	TF binding site mE1_TFBS_HSA
X	2106613	X_2106613_SNP [dm3] X_2212580_SNP [dm6]	A	C	6.006e^-5	0.573	UPSTREAM msta INTRON msta
2L	11743602	2L_11743602_SNP [dm3] 2L_11743602_SNP [dm6]	T	C	6.009e^-5	0.573	SYNONYMOUS_CODING Vha100-5 DOWNSTREAM CR44144
2R	16736735	2R_16736735_SNP [dm3] 2R_20849230_SNP [dm6]	A	G	6.024e^-5	0.573	SYNONYMOUS_CODING CG17999 DOWNSTREAM CG9993
3L	4791109	3L_4791109_SNP [dm3] 3L_4791109_SNP [dm6]	C	T	6.039e^-5	0.573	SYNONYMOUS_CODING RhoGEF64C	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	15822228	X_15822228_SNP [dm3] X_15928195_SNP [dm6]	A	T	6.052e^-5	0.573	DOWNSTREAM Ranbp16 INTRON Ranbp16 & 1 other
2L	12994547	2L_12994547_SNP [dm3] 2L_12994547_SNP [dm6]	G	A	6.080e^-5	0.573	INTRON CG12404
2L	2251336	2L_2251336_SNP [dm3] 2L_2251336_SNP [dm6]	A	G	6.111e^-5	0.573	UPSTREAM Ser12 DOWNSTREAM CG17239 INTERGENIC
3L	13761037	3L_13761037_SNP [dm3] 3L_13767937_SNP [dm6]	G	C	6.111e^-5	0.573	INTRON bru-3
3L	11205932	3L_11205932_SNP [dm3] 3L_11212832_SNP [dm6]	T	C	6.126e^-5	0.573	SYNONYMOUS_CODING CG7600	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	12627809	2R_12627809_SNP [dm3] 2R_16740304_SNP [dm6]	C	T	6.134e^-5	0.573	INTERGENIC
2L	12804342	2L_12804342_SNP [dm3] 2L_12804342_SNP [dm6]	A	G	6.139e^-5	0.573	INTERGENIC
3R	18169318	3R_18169318_SNP [dm3] 3R_22343596_SNP [dm6]	C	T	6.156e^-5	0.573	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	13784856	3L_13784856_SNP [dm3] 3L_13791756_SNP [dm6]	G	A	6.163e^-5	0.573	INTRON bru-3
3L	5858536	3L_5858536_SNP [dm3] 3L_5865436_SNP [dm6]	G	A	6.197e^-5	0.573	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	12429378	3R_12429378_SNP [dm3] 3R_16603656_SNP [dm6]	T	A	6.266e^-5	0.573	INTRON CG10345
3L	5342759	3L_5342759_SNP [dm3] 3L_5349659_SNP [dm6]	G	A	6.272e^-5	0.573	INTRON lama
2R	11625044	2R_11625044_SNP [dm3] 2R_15737539_SNP [dm6]	T	A	6.275e^-5	0.573	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	19392902	2R_19392902_SNP [dm3] 2R_23505379_SNP [dm6]	A	G	6.282e^-5	0.573	INTERGENIC
3R	9893960	3R_9893960_SNP [dm3] 3R_14068238_SNP [dm6]	T	C	6.305e^-5	0.573	INTRON foxo	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	12875882	3L_12875882_SNP [dm3] 3L_12882782_SNP [dm6]	C	T	6.332e^-5	0.573	INTERGENIC
3R	12541603	3R_12541603_SNP [dm3] 3R_16715881_SNP [dm6]	T	A	6.343e^-5	0.573	INTRON Ubx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	9360900	3R_9360900_SNP [dm3] 3R_13535178_SNP [dm6]	C	T	6.353e^-5	0.573	INTERGENIC
2L	2290716	2L_2290716_SNP [dm3] 2L_2290716_SNP [dm6]	G	A	6.396e^-5	0.573	UTR_5_PRIME robl22E UPSTREAM robl22E
3R	26419820	3R_26419820_SNP [dm3] 3R_30594098_SNP [dm6]	G	T	6.465e^-5	0.573	INTRON CG2246
3R	13858081	3R_13858081_SNP [dm3] 3R_18032359_SNP [dm6]	G	T	6.469e^-5	0.573	INTERGENIC
2R	16736950	2R_16736950_SNP [dm3] 2R_20849445_SNP [dm6]	G	T	6.482e^-5	0.573	SYNONYMOUS_CODING CG17999 DOWNSTREAM CG9993	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	7206881	X_7206881_SNP [dm3] X_7312848_SNP [dm6]	A	T	6.579e^-5	0.579	INTRON CR44357 & 1 other
2R	11625028	2R_11625028_SNP [dm3] 2R_15737523_SNP [dm6]	C	T	6.605e^-5	0.579	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	16535496	3R_16535496_SNP [dm3] 3R_20709774_SNP [dm6]	G	T	6.756e^-5	0.589	INTRON Oamb
2R	12283226	2R_12283226_SNP [dm3] 2R_16395721_SNP [dm6]	T	G	6.858e^-5	0.593	INTRON Sema-2b	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	12283229	2R_12283229_SNP [dm3] 2R_16395724_SNP [dm6]	G	C	6.858e^-5	0.593	INTRON Sema-2b	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	18366747	3L_18366747_INS [dm3] 3L_18373647_INS [dm6]	C	CGC	6.958e^-5	0.599	INTERGENIC
3L	9810739	3L_9810739_SNP [dm3] 3L_9817639_SNP [dm6]	T	C	7.033e^-5	0.6	INTRON CG43897
2L	12302140	2L_12302140_SNP [dm3] 2L_12302140_SNP [dm6]	A	T	7.091e^-5	0.6	INTRON aret
3L	13635974	3L_13635974_SNP [dm3] 3L_13642874_SNP [dm6]	T	G	7.125e^-5	0.6	INTRON bru-3
2R	16736757	2R_16736757_SNP [dm3] 2R_20849252_SNP [dm6]	T	A	7.161e^-5	0.6	DOWNSTREAM CG9993 INTRON CG17999
3L	16197351	3L_16197351_SNP [dm3] 3L_16204251_SNP [dm6]	A	G	7.192e^-5	0.6	INTERGENIC
3L	3879272	3L_3879272_SNP [dm3] 3L_3879272_SNP [dm6]	C	T	7.203e^-5	0.6	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
2R	9961649	2R_9961649_SNP [dm3] 2R_14074144_SNP [dm6]	T	G	7.372e^-5	0.6	INTRON Prosap	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	5025186	2L_5025186_DEL [dm3] 2L_5025186_DEL [dm6]	AGCGAAAAATGTGAATCCCC...	A	7.376e^-5	0.6	INTRON vkg	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_Trl
3L	13388237	3L_13388237_SNP [dm3] 3L_13395137_SNP [dm6]	T	G	7.386e^-5	0.6	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	15796158	X_15796158_SNP [dm3] X_15902125_SNP [dm6]	A	C	7.400e^-5	0.6	SPLICE_SITE_REGION shi INTRON shi	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	15137501	3R_15137501_SNP [dm3] 3R_19311779_SNP [dm6]	C	A	7.491e^-5	0.6	INTRON Dl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	4981781	3L_4981781_SNP [dm3] 3L_4981781_SNP [dm6]	T	C	7.508e^-5	0.6	DOWNSTREAM CR45685 INTRON Con	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19145065	2R_19145065_SNP [dm3] 2R_23257542_SNP [dm6]	C	T	7.551e^-5	0.6	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	8299665	2R_8299665_SNP [dm3] 2R_12412160_SNP [dm6]	T	A	7.605e^-5	0.6	DOWNSTREAM CG33627 INTERGENIC
2L	5025185	2L_5025185_SNP [dm3] 2L_5025185_SNP [dm6]	C	T	7.661e^-5	0.6	INTRON vkg	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_Trl
X	15796175	X_15796175_SNP [dm3] X_15902142_SNP [dm6]	C	T	7.666e^-5	0.6	INTRON shi	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	15592272	2R_15592272_SNP [dm3] 2R_19704767_SNP [dm6]	G	T	7.721e^-5	0.6	UPSTREAM Obp56d INTERGENIC	regulatory region REDfly_CRMs
3L	13397405	3L_13397405_SNP [dm3] 3L_13404305_SNP [dm6]	T	C	7.737e^-5	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3L	16998331	3L_16998331_SNP [dm3] 3L_17005231_SNP [dm6]	C	T	7.751e^-5	0.6	INTRON CG3764
3L	5344231	3L_5344231_SNP [dm3] 3L_5351131_SNP [dm6]	T	A	7.762e^-5	0.6	INTRON lama
2L	11484937	2L_11484937_INS [dm3] 2L_11484937_INS [dm6]	A	AA	7.800e^-5	0.6	UTR_5_PRIME sala & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	16420589	2L_16420589_SNP [dm3] 2L_16420589_SNP [dm6]	G	A	7.801e^-5	0.6	INTRON CG5888
X	14540313	X_14540313_SNP [dm3] X_14646280_SNP [dm6]	T	C	7.855e^-5	0.6	INTRON NetA	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	11253837	2L_11253837_SNP [dm3] 2L_11253837_SNP [dm6]	G	T	7.871e^-5	0.6	INTRON ab
2R	14556149	2R_14556149_SNP [dm3] 2R_18668644_SNP [dm6]	A	G	7.888e^-5	0.6	INTRON edl
2L	13178139	2L_13178139_SNP [dm3] 2L_13178139_SNP [dm6]	T	A	7.941e^-5	0.6	NON_SYNONYMOUS_CODING CG5439	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	13887435	2R_13887435_SNP [dm3] 2R_17999930_SNP [dm6]	C	T	7.951e^-5	0.6	INTRON dpr13
3R	26424013	3R_26424013_SNP [dm3] 3R_30598291_SNP [dm6]	A	T	8.000e^-5	0.6	NON_SYNONYMOUS_CODING CG31019 INTRON CG2246 & 1 other	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2R	16737085	2R_16737085_SNP [dm3] 2R_20849580_SNP [dm6]	T	C	8.009e^-5	0.6	SYNONYMOUS_CODING CG17999 DOWNSTREAM CG9993	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	1673000	2L_1673000_SNP [dm3] 2L_1673000_SNP [dm6]	G	A	8.031e^-5	0.6	INTRON chinmo
2R	19145063	2R_19145063_SNP [dm3] 2R_23257540_SNP [dm6]	A	T	8.059e^-5	0.6	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11878353	3L_11878353_SNP [dm3] 3L_11885253_SNP [dm6]	C	G	8.104e^-5	0.6	INTRON CG44837
3R	8424949	3R_8424949_SNP [dm3] 3R_12599227_SNP [dm6]	C	T	8.135e^-5	0.6	INTERGENIC
2R	13887447	2R_13887447_SNP [dm3] 2R_17999942_SNP [dm6]	C	A	8.179e^-5	0.6	INTRON dpr13
3L	14333419	3L_14333419_SNP [dm3] 3L_14340319_SNP [dm6]	C	A	8.192e^-5	0.6	INTRON fz	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	11485032	2L_11485032_SNP [dm3] 2L_11485032_SNP [dm6]	G	T	8.339e^-5	0.6	SPLICE_SITE_DONOR sala & 1 other INTRON CG43355 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	10235601	3L_10235601_SNP [dm3] 3L_10242501_SNP [dm6]	T	G	8.340e^-5	0.6	DOWNSTREAM CR44541 & 1 other INTERGENIC
3L	11878328	3L_11878328_SNP [dm3] 3L_11885228_SNP [dm6]	G	A	8.399e^-5	0.6	INTRON CG44837
2L	8296389	2L_8296389_INS [dm3] 2L_8296389_INS [dm6]	C	CC	8.426e^-5	0.6	DOWNSTREAM CR43752 INTRON Btk29A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	7335055	3L_7335055_SNP [dm3] 3L_7341955_SNP [dm6]	G	A	8.491e^-5	0.6	UTR_3_PRIME CG8596 DOWNSTREAM lark	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8387719	2L_8387719_SNP [dm3] 2L_8387719_SNP [dm6]	G	A	8.520e^-5	0.6	SYNONYMOUS_CODING CG13384	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9512345	2L_9512345_SNP [dm3] 2L_9512345_SNP [dm6]	A	T	8.550e^-5	0.6	INTRON CG33298	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2R	11625068	2R_11625068_SNP [dm3] 2R_15737563_SNP [dm6]	C	A	8.645e^-5	0.6	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	12735065	3R_12735065_SNP [dm3] 3R_16909343_SNP [dm6]	A	C	8.700e^-5	0.6	INTRON iab-8	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	11295264	2R_11295264_SNP [dm3] 2R_15407759_SNP [dm6]	A	C	8.742e^-5	0.6	INTRON CG43729
2L	2120061	2L_2120061_INS [dm3] 2L_2120061_INS [dm6]	G	GA	8.765e^-5	0.6	INTERGENIC
3R	16616922	3R_16616922_SNP [dm3] 3R_20791200_SNP [dm6]	C	T	8.844e^-5	0.6	INTRON Syp
X	16164634	X_16164634_SNP [dm3] X_16270601_SNP [dm6]	A	T	8.870e^-5	0.6	UPSTREAM Mfe2 INTRON kat80	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA
3L	11622036	3L_11622036_SNP [dm3] 3L_11628936_SNP [dm6]	C	G	8.908e^-5	0.6	UPSTREAM mir-3642 INTRON CG18815	TF binding site mE1_TFBS_chinmo
2R	16736702	2R_16736702_SNP [dm3] 2R_20849197_SNP [dm6]	G	C	8.923e^-5	0.6	SYNONYMOUS_CODING CG17999 DOWNSTREAM CG9993
2R	8984400	2R_8984400_SNP [dm3] 2R_13096895_SNP [dm6]	A	T	8.968e^-5	0.6	INTERGENIC
X	9502684	X_9502684_DEL [dm3] X_9608651_DEL [dm6]	GG	G	8.970e^-5	0.6	UTR_5_PRIME Aats-lys UPSTREAM CG42797 INTRON Aats-lys	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	16512601	3L_16512601_SNP [dm3] 3L_16519501_SNP [dm6]	C	T	8.988e^-5	0.6	INTRON CG43373
2L	2250009	2L_2250009_DEL [dm3] 2L_2250009_DEL [dm6]	CT	C	8.994e^-5	0.6	DOWNSTREAM Ser12 INTERGENIC
3R	14169268	3R_14169268_SNP [dm3] 3R_18343546_SNP [dm6]	C	A	9.015e^-5	0.6	INTRON CG15803
2L	13529846	2L_13529846_SNP [dm3] 2L_13529846_SNP [dm6]	C	A	9.034e^-5	0.6	UPSTREAM CG33642 DOWNSTREAM CG33641 INTRON B4
3L	13357368	3L_13357368_SNP [dm3] 3L_13364268_SNP [dm6]	G	T	9.059e^-5	0.6	INTERGENIC
3L	13392329	3L_13392329_SNP [dm3] 3L_13399229_SNP [dm6]	G	C	9.059e^-5	0.6	INTRON sens	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	5430461	3L_5430461_SNP [dm3] 3L_5437361_SNP [dm6]	A	T	9.100e^-5	0.6	INTRON CG34391
2L	12302133	2L_12302133_SNP [dm3] 2L_12302133_SNP [dm6]	G	A	9.134e^-5	0.6	INTRON aret
3L	16302871	3L_16302871_SNP [dm3] 3L_16309771_SNP [dm6]	T	A	9.205e^-5	0.6	EXON CR32160
3L	11878374	3L_11878374_SNP [dm3] 3L_11885274_SNP [dm6]	G	T	9.235e^-5	0.6	INTRON CG44837
2R	15581888	2R_15581888_SNP [dm3] 2R_19694383_SNP [dm6]	A	T	9.270e^-5	0.6	EXON CR44506
3L	7109476	3L_7109476_SNP [dm3] 3L_7116376_SNP [dm6]	T	A	9.351e^-5	0.6	INTRON form3
3L	9874939	3L_9874939_SNP [dm3] 3L_9881839_SNP [dm6]	A	T	9.516e^-5	0.6	INTRON CG34382
2R	16353394	2R_16353394_SNP [dm3] 2R_20465889_SNP [dm6]	T	C	9.517e^-5	0.6	INTRON CG12484
2L	7665577	2L_7665577_SNP [dm3] 2L_7665577_SNP [dm6]	G	A	9.571e^-5	0.6	UPSTREAM Myo28B1 INTRON Slob
3R	24541000	3R_24541000_SNP [dm3] 3R_28715278_SNP [dm6]	G	A	9.591e^-5	0.6	INTRON htt	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
2L	5276482	2L_5276482_SNP [dm3] 2L_5276482_SNP [dm6]	C	T	9.626e^-5	0.6	INTRON Bsg25D	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	5649567	3L_5649567_SNP [dm3] 3L_5656467_SNP [dm6]	C	T	9.680e^-5	0.6	INTRON lin-28	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3R	12735067	3R_12735067_SNP [dm3] 3R_16909345_SNP [dm6]	C	T	9.685e^-5	0.6	INTRON iab-8	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	3814096	2R_3814096_SNP [dm3] 2R_7926591_SNP [dm6]	G	C	9.719e^-5	0.6	UPSTREAM CG8791 INTERGENIC
3L	11205911	3L_11205911_SNP [dm3] 3L_11212811_SNP [dm6]	A	C	9.777e^-5	0.6	INTRON CG7600	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	12994346	2L_12994346_SNP [dm3] 2L_12994346_SNP [dm6]	T	A	9.779e^-5	0.6	INTRON CG12404
2R	19392898	2R_19392898_SNP [dm3] 2R_23505375_SNP [dm6]	C	G	9.821e^-5	0.6	INTERGENIC
3R	19499184	3R_19499184_SNP [dm3] 3R_23673462_SNP [dm6]	A	G	9.830e^-5	0.6	INTERGENIC
2R	13341748	2R_13341748_SNP [dm3] 2R_17454243_SNP [dm6]	T	A	9.850e^-5	0.6	SYNONYMOUS_CODING CG10764
3R	13869799	3R_13869799_SNP [dm3] 3R_18044077_SNP [dm6]	A	T	9.853e^-5	0.6	INTERGENIC
3L	11215510	3L_11215510_SNP [dm3] 3L_11222410_SNP [dm6]	C	T	9.860e^-5	0.6	INTRON CG42671
3L	5279938	3L_5279938_SNP [dm3] 3L_5286838_SNP [dm6]	A	G	9.862e^-5	0.6	INTERGENIC
3L	12875928	3L_12875928_SNP [dm3] 3L_12882828_SNP [dm6]	T	A	9.867e^-5	0.6	INTERGENIC
3R	14174362	3R_14174362_SNP [dm3] 3R_18348640_SNP [dm6]	A	G	9.937e^-5	0.6	INTRON CG15803
3R	5211196	3R_5211196_SNP [dm3] 3R_9385474_SNP [dm6]	C	T	1.001e^-4	0.6	INTRON FER
2L	11886357	2L_11886357_SNP [dm3] 2L_11886357_SNP [dm6]	T	G	1.017e^-4	0.6	INTRON Pde1c
3L	14626325	3L_14626325_SNP [dm3] 3L_14633225_SNP [dm6]	C	T	1.019e^-4	0.6	SYNONYMOUS_CODING dlp	TF binding site mE1_TFBS_Trl
2R	12627781	2R_12627781_SNP [dm3] 2R_16740276_SNP [dm6]	C	G	1.023e^-4	0.6	INTERGENIC
3R	12735071	3R_12735071_SNP [dm3] 3R_16909349_SNP [dm6]	G	T	1.024e^-4	0.6	INTRON iab-8	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	12746323	3L_12746323_SNP [dm3] 3L_12753223_SNP [dm6]	T	A	1.024e^-4	0.6	UTR_3_PRIME CG10984 DOWNSTREAM CG10973
3R	8094862	3R_8094862_SNP [dm3] 3R_12269140_SNP [dm6]	C	T	1.025e^-4	0.6	INTRON svp & 1 other
3L	13755617	3L_13755617_SNP [dm3] 3L_13762517_SNP [dm6]	G	A	1.027e^-4	0.6	INTRON bru-3
3R	5377622	3R_5377622_SNP [dm3] 3R_9551900_SNP [dm6]	G	T	1.032e^-4	0.6	UPSTREAM RnpS1 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
3L	17024918	3L_17024918_SNP [dm3] 3L_17031818_SNP [dm6]	A	T	1.045e^-4	0.6	DOWNSTREAM CR45756 INTRON Ilp8	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	16521802	3R_16521802_SNP [dm3] 3R_20696080_SNP [dm6]	T	C	1.052e^-4	0.6	INTRON Oamb
2L	10621641	2L_10621641_INS [dm3] 2L_10621641_INS [dm6]	C	CACTCACACAC...	1.057e^-4	0.6	INTRON Trim9
X	6361039	X_6361039_SNP [dm3] X_6467006_SNP [dm6]	C	A	1.057e^-4	0.6	UTR_3_PRIME CG42340	TF binding site BDTNP1_TFBS_ftz BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2R	19715971	2R_19715971_SNP [dm3] 2R_23828448_SNP [dm6]	T	G	1.058e^-4	0.6	INTRON CG5549
2R	19720041	2R_19720041_SNP [dm3] 2R_23832518_SNP [dm6]	T	C	1.058e^-4	0.6	INTRON CG5549
2R	3777601	2R_3777601_SNP [dm3] 2R_7890096_SNP [dm6]	T	C	1.060e^-4	0.6	START_GAINED CG30377 UTR_5_PRIME CG30377
3R	5743680	3R_5743680_SNP [dm3] 3R_9917958_SNP [dm6]	T	C	1.062e^-4	0.6	INTRON Glut4EF
2R	19068571	2R_19068571_SNP [dm3] 2R_23181048_SNP [dm6]	T	C	1.065e^-4	0.6	INTRON CG34371	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2L	803819	2L_803819_SNP [dm3] 2L_803819_SNP [dm6]	G	T	1.065e^-4	0.6	INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	5685196	3R_5685196_SNP [dm3] 3R_9859474_SNP [dm6]	G	A	1.072e^-4	0.6	INTRON Teh1
2L	12443130	2L_12443130_SNP [dm3] 2L_12443130_SNP [dm6]	G	A	1.076e^-4	0.6	SYNONYMOUS_CODING Oatp33Ea
3L	7109350	3L_7109350_SNP [dm3] 3L_7116250_SNP [dm6]	T	A	1.078e^-4	0.6	INTRON form3
3L	3879392	3L_3879392_SNP [dm3] 3L_3879392_SNP [dm6]	G	A	1.080e^-4	0.6	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
X	2620544	X_2620544_SNP [dm3] X_2726511_SNP [dm6]	G	A	1.085e^-4	0.6	UTR_3_PRIME fs_1_Ya UPSTREAM CG2709	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3L	5132425	3L_5132425_SNP [dm3] 3L_5139325_SNP [dm6]	A	G	1.086e^-4	0.6	SYNONYMOUS_CODING Prpk UPSTREAM CHMP2B DOWNSTREAM CG4611	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA
3L	5133336	3L_5133336_SNP [dm3] 3L_5140236_SNP [dm6]	A	G	1.089e^-4	0.6	SYNONYMOUS_CODING CHMP2B UPSTREAM Prpk DOWNSTREAM CG10672	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2L	11485029	2L_11485029_DEL [dm3] 2L_11485029_DEL [dm6]	AA	A	1.090e^-4	0.6	SPLICE_SITE_REGION sala & 1 other UTR_5_PRIME sala & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3R	8514953	3R_8514953_SNP [dm3] 3R_12689231_SNP [dm6]	C	T	1.090e^-4	0.6	UTR_5_PRIME kar DOWNSTREAM Su_fu_	TF binding site mE1_TFBS_chinmo
2R	9826796	2R_9826796_SNP [dm3] 2R_13939291_SNP [dm6]	C	T	1.094e^-4	0.6	INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	1795749	3R_1795749_SNP [dm3] 3R_5970027_SNP [dm6]	T	A	1.095e^-4	0.6	EXON CR44926
3L	13388094	3L_13388094_SNP [dm3] 3L_13394994_SNP [dm6]	A	T	1.097e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
3R	12735075	3R_12735075_DEL [dm3] 3R_16909353_DEL [dm6]	AG	A	1.098e^-4	0.6	INTRON iab-8	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	17137515	2L_17137515_SNP [dm3] 2L_17137515_SNP [dm6]	G	A	1.101e^-4	0.6	INTRON beat-IIIa & 1 other
3R	14234874	3R_14234874_SNP [dm3] 3R_18409152_SNP [dm6]	A	G	1.105e^-4	0.6	SYNONYMOUS_CODING CG31122 DOWNSTREAM CG10864
2L	10107744	2L_10107744_SNP [dm3] 2L_10107744_SNP [dm6]	C	A	1.107e^-4	0.6	INTRON CG44153 & 1 other
3R	8432718	3R_8432718_SNP [dm3] 3R_12606996_SNP [dm6]	G	A	1.108e^-4	0.6	INTERGENIC
3L	4717907	3L_4717907_SNP [dm3] 3L_4717907_SNP [dm6]	T	C	1.112e^-4	0.6	INTRON RhoGEF64C
2R	16713284	2R_16713284_SNP [dm3] 2R_20825779_SNP [dm6]	T	C	1.113e^-4	0.6	INTRON insc	TF binding site mE1_TFBS_cad
2L	12110314	2L_12110314_SNP [dm3] 2L_12110314_SNP [dm6]	C	A	1.114e^-4	0.6	SYNONYMOUS_CODING Phae1 UPSTREAM Phae2	TF binding site mE1_TFBS_cad mE1_TFBS_Trl
X	17874855	X_17874855_SNP [dm3] X_17980822_SNP [dm6]	C	G	1.115e^-4	0.6	INTRON Sh
3R	5377624	3R_5377624_SNP [dm3] 3R_9551902_SNP [dm6]	A	T	1.118e^-4	0.6	UPSTREAM RnpS1 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
2L	13538162	2L_13538162_SNP [dm3] 2L_13538162_SNP [dm6]	G	A	1.127e^-4	0.6	INTRON B4
2L	12136404	2L_12136404_SNP [dm3] 2L_12136404_SNP [dm6]	T	C	1.131e^-4	0.6	INTERGENIC
X	2101341	X_2101341_SNP [dm3] X_2207308_SNP [dm6]	G	A	1.136e^-4	0.6	INTRON msta
3R	25969990	3R_25969990_SNP [dm3] 3R_30144268_SNP [dm6]	A	C	1.137e^-4	0.6	INTRON AdoR
3L	11627119	3L_11627119_SNP [dm3] 3L_11634019_SNP [dm6]	A	T	1.137e^-4	0.6	UPSTREAM CR45158 INTRON CG32091
3R	16521713	3R_16521713_SNP [dm3] 3R_20695991_SNP [dm6]	A	G	1.151e^-4	0.6	INTRON Oamb
3L	3411844	3L_3411844_SNP [dm3] 3L_3411844_SNP [dm6]	A	T	1.156e^-4	0.6	DOWNSTREAM mir-2282 INTRON sty	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_HSA
3R	8527509	3R_8527509_SNP [dm3] 3R_12701787_SNP [dm6]	T	A	1.156e^-4	0.6	INTRON Past1
2L	2069228	2L_2069228_DEL [dm3] 2L_2069228_DEL [dm6]	AA	A	1.158e^-4	0.6	INTRON dpr3	TF binding site mE1_TFBS_chinmo
2L	8139231	2L_8139231_SNP [dm3] 2L_8139231_SNP [dm6]	G	C	1.159e^-4	0.6	NON_SYNONYMOUS_CODING CG8552 UTR_5_PRIME CG8552	TF binding site mE1_TFBS_cad
3L	2094525	3L_2094525_SNP [dm3] 3L_2094525_SNP [dm6]	C	T	1.162e^-4	0.6	INTRON sls
2R	16353418	2R_16353418_SNP [dm3] 2R_20465913_SNP [dm6]	A	T	1.162e^-4	0.6	INTRON CG12484
2R	13341361	2R_13341361_DEL [dm3] 2R_17453856_DEL [dm6]	GCCTTCTCTATATA...	G	1.164e^-4	0.6	INTRON CG10764
2L	10079349	2L_10079349_INS [dm3] 2L_10079349_INS [dm6]	A	AA	1.188e^-4	0.6	INTRON CG44153
2L	2249808	2L_2249808_SNP [dm3] 2L_2249808_SNP [dm6]	T	G	1.191e^-4	0.6	DOWNSTREAM Ser12 INTERGENIC
2R	8299645	2R_8299645_SNP [dm3] 2R_12412140_SNP [dm6]	A	G	1.192e^-4	0.6	DOWNSTREAM CG33627 INTERGENIC
3R	22938168	3R_22938168_SNP [dm3] 3R_27112446_SNP [dm6]	A	T	1.196e^-4	0.6	UPSTREAM CG5815 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
2R	10422292	2R_10422292_SNP [dm3] 2R_14534787_SNP [dm6]	T	G	1.199e^-4	0.6	INTRON ttv
2L	11485052	2L_11485052_SNP [dm3] 2L_11485052_SNP [dm6]	A	G	1.199e^-4	0.6	INTRON CG43355 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	3757252	3L_3757252_SNP [dm3] 3L_3757252_SNP [dm6]	A	G	1.201e^-4	0.6	INTRON CG32264	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2L	16861967	2L_16861967_SNP [dm3] 2L_16861967_SNP [dm6]	G	A	1.202e^-4	0.6	UPSTREAM CG6012 INTRON CR43858	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	12684094	2L_12684094_SNP [dm3] 2L_12684094_SNP [dm6]	A	G	1.202e^-4	0.6	INTRON pdm2
3R	9634659	3R_9634659_SNP [dm3] 3R_13808937_SNP [dm6]	C	G	1.203e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	9470689	3L_9470689_SNP [dm3] 3L_9477589_SNP [dm6]	G	A	1.211e^-4	0.6	NON_SYNONYMOUS_CODING Jarid2 UPSTREAM Uch-L5	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	13341336	2R_13341336_SNP [dm3] 2R_17453831_SNP [dm6]	T	C	1.211e^-4	0.6	INTRON CG10764
2R	13887468	2R_13887468_SNP [dm3] 2R_17999963_SNP [dm6]	G	C	1.215e^-4	0.6	INTRON dpr13
X	8433716	X_8433716_SNP [dm3] X_8539683_SNP [dm6]	A	G	1.216e^-4	0.6	INTRON Nrg
3L	4777288	3L_4777288_SNP [dm3] 3L_4777288_SNP [dm6]	G	A	1.218e^-4	0.6	INTRON RhoGEF64C
2R	12283238	2R_12283238_SNP [dm3] 2R_16395733_SNP [dm6]	T	G	1.221e^-4	0.6	INTRON Sema-2b	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	17875306	X_17875306_SNP [dm3] X_17981273_SNP [dm6]	C	T	1.223e^-4	0.6	INTRON Sh
2R	11024532	2R_11024532_SNP [dm3] 2R_15137027_SNP [dm6]	C	G	1.225e^-4	0.6	INTRON chn	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	4926522	2R_4926522_SNP [dm3] 2R_9039017_SNP [dm6]	C	T	1.225e^-4	0.6	DOWNSTREAM Ance-4 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
2L	2250387	2L_2250387_SNP [dm3] 2L_2250387_SNP [dm6]	A	G	1.227e^-4	0.6	DOWNSTREAM Ser12 INTERGENIC
3R	21788157	3R_21788157_INS [dm3] 3R_25962435_INS [dm6]	C	CG	1.228e^-4	0.6	DOWNSTREAM CG14540 INTRON boss
X	15149420	X_15149420_SNP [dm3] X_15255387_SNP [dm6]	C	T	1.228e^-4	0.6	INTERGENIC
3L	13617994	3L_13617994_SNP [dm3] 3L_13624894_SNP [dm6]	A	C	1.230e^-4	0.6	INTRON bru-3
X	7818842	X_7818842_SNP [dm3] X_7924809_SNP [dm6]	G	A	1.230e^-4	0.6	UTR_3_PRIME CG10777
X	2110011	X_2110011_SNP [dm3] X_2215978_SNP [dm6]	C	T	1.231e^-4	0.6	SYNONYMOUS_CODING Vinc	TF binding site BDTNP1_TFBS_twi mE1_TFBS_chinmo
3L	5389079	3L_5389079_SNP [dm3] 3L_5395979_SNP [dm6]	T	C	1.232e^-4	0.6	INTERGENIC
2L	9170179	2L_9170179_INS [dm3] 2L_9170179_INS [dm6]	T	TT	1.234e^-4	0.6	INTRON tai
2R	16713288	2R_16713288_SNP [dm3] 2R_20825783_SNP [dm6]	G	T	1.242e^-4	0.6	INTRON insc	TF binding site mE1_TFBS_cad
2R	13906481	2R_13906481_DEL [dm3] 2R_18018976_DEL [dm6]	AA	A	1.246e^-4	0.6	INTRON CG5084
3L	13388130	3L_13388130_SNP [dm3] 3L_13395030_SNP [dm6]	A	T	1.246e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
3L	13388131	3L_13388131_SNP [dm3] 3L_13395031_SNP [dm6]	C	T	1.246e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
3L	13388158	3L_13388158_INS [dm3] 3L_13395058_INS [dm6]	C	GATTCCT	1.246e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
3R	4986473	3R_4986473_SNP [dm3] 3R_9160751_SNP [dm6]	G	A	1.250e^-4	0.6	INTRON pum	TF binding site mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	16762821	2L_16762821_SNP [dm3] 2L_16762821_SNP [dm6]	A	C	1.271e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	3646550	2L_3646550_SNP [dm3] 2L_3646550_SNP [dm6]	G	A	1.274e^-4	0.6	UPSTREAM for INTRON for
2L	7171550	2L_7171550_SNP [dm3] 2L_7171550_SNP [dm6]	A	G	1.279e^-4	0.6	INTERGENIC
3L	11232089	3L_11232089_SNP [dm3] 3L_11238989_SNP [dm6]	A	G	1.281e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	19250941	3L_19250941_SNP [dm3] 3L_19257841_SNP [dm6]	A	T	1.282e^-4	0.6	UTR_3_PRIME nes DOWNSTREAM nes & 1 other
3L	5310825	3L_5310825_SNP [dm3] 3L_5317725_SNP [dm6]	G	T	1.288e^-4	0.6	INTERGENIC
3L	4788804	3L_4788804_SNP [dm3] 3L_4788804_SNP [dm6]	T	C	1.294e^-4	0.6	INTRON RhoGEF64C	TF binding site mE1_TFBS_chinmo
3L	12875976	3L_12875976_SNP [dm3] 3L_12882876_SNP [dm6]	C	G	1.300e^-4	0.6	INTERGENIC
3R	7976173	3R_7976173_SNP [dm3] 3R_12150451_SNP [dm6]	C	A	1.301e^-4	0.6	SYNONYMOUS_CODING dpr15
X	16164738	X_16164738_SNP [dm3] X_16270705_SNP [dm6]	G	A	1.302e^-4	0.6	UPSTREAM Mfe2 INTRON kat80	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA
3R	8533689	3R_8533689_SNP [dm3] 3R_12707967_SNP [dm6]	T	A	1.302e^-4	0.6	NON_SYNONYMOUS_CODING mus308	TF binding site mE1_TFBS_sens
3L	15210633	3L_15210633_SNP [dm3] 3L_15217533_SNP [dm6]	G	C	1.304e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	14326351	3R_14326351_SNP [dm3] 3R_18500629_SNP [dm6]	T	C	1.305e^-4	0.6	INTRON fru
2R	16736556	2R_16736556_SNP [dm3] 2R_20849051_SNP [dm6]	T	G	1.312e^-4	0.6	INTRON CG17999
2L	9512202	2L_9512202_SNP [dm3] 2L_9512202_SNP [dm6]	G	A	1.316e^-4	0.6	INTRON CG33298	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2L	16575220	2L_16575220_SNP [dm3] 2L_16575220_SNP [dm6]	A	T	1.324e^-4	0.6	INTRON CG42389
3L	13357879	3L_13357879_SNP [dm3] 3L_13364779_SNP [dm6]	C	A	1.325e^-4	0.6	INTERGENIC
3L	13358748	3L_13358748_SNP [dm3] 3L_13365648_SNP [dm6]	G	A	1.327e^-4	0.6	INTERGENIC
3L	8533909	3L_8533909_SNP [dm3] 3L_8540809_SNP [dm6]	A	G	1.330e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	7238625	X_7238625_SNP [dm3] X_7344592_SNP [dm6]	T	C	1.351e^-4	0.6	INTRON CR44357 & 1 other
X	20474687	X_20474687_SNP [dm3] X_20603660_SNP [dm6]	G	A	1.354e^-4	0.6	INTRON RunxA
X	19167307	X_19167307_SNP [dm3] X_19273274_SNP [dm6]	T	C	1.359e^-4	0.6	UTR_3_PRIME Vav DOWNSTREAM CG32537
X	16166514	X_16166514_SNP [dm3] X_16272481_SNP [dm6]	G	T	1.360e^-4	0.6	INTRON kat80 & 1 other	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2R	15032870	2R_15032870_SNP [dm3] 2R_19145365_SNP [dm6]	A	T	1.366e^-4	0.6	DOWNSTREAM CR43399 INTRON ena
2R	19464046	2R_19464046_DEL [dm3] 2R_23576523_DEL [dm6]	TT	T	1.367e^-4	0.6	INTRON apt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
X	20403037	X_20403037_SNP [dm3] X_20532010_SNP [dm6]	C	T	1.371e^-4	0.6	INTERGENIC
3L	4788729	3L_4788729_SNP [dm3] 3L_4788729_SNP [dm6]	T	C	1.372e^-4	0.6	INTRON RhoGEF64C	TF binding site mE1_TFBS_chinmo
X	9441108	X_9441108_INS [dm3] X_9547075_INS [dm6]	T	TAGAAGACT	1.374e^-4	0.6	INTRON CG32700
3L	5279912	3L_5279912_SNP [dm3] 3L_5286812_SNP [dm6]	T	C	1.378e^-4	0.6	INTERGENIC
X	19617989	X_19617989_SNP [dm3] X_19723956_SNP [dm6]	A	G	1.380e^-4	0.6	INTRON CG12531
3L	14141937	3L_14141937_SNP [dm3] 3L_14148837_SNP [dm6]	G	C	1.383e^-4	0.6	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad
3L	12932554	3L_12932554_SNP [dm3] 3L_12939454_SNP [dm6]	T	A	1.385e^-4	0.6	INTERGENIC
2R	16736195	2R_16736195_SNP [dm3] 2R_20848690_SNP [dm6]	A	G	1.385e^-4	0.6	SYNONYMOUS_CODING CG17999	TF binding site mE1_TFBS_chinmo
2L	9512359	2L_9512359_SNP [dm3] 2L_9512359_SNP [dm6]	C	T	1.389e^-4	0.6	INTRON CG33298	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
3L	9827172	3L_9827172_SNP [dm3] 3L_9834072_SNP [dm6]	T	C	1.394e^-4	0.6	UTR_3_PRIME CG43897 DOWNSTREAM I-2
3L	13351812	3L_13351812_SNP [dm3] 3L_13358712_SNP [dm6]	G	A	1.397e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	13388149	3L_13388149_SNP [dm3] 3L_13395049_SNP [dm6]	C	G	1.398e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
3R	6622710	3R_6622710_SNP [dm3] 3R_10796988_SNP [dm6]	T	G	1.399e^-4	0.6	NON_SYNONYMOUS_CODING CG14692	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	7272172	3L_7272172_SNP [dm3] 3L_7279072_SNP [dm6]	C	A	1.405e^-4	0.6	INTRON unc-13-4A
3L	3532472	3L_3532472_SNP [dm3] 3L_3532472_SNP [dm6]	T	A	1.406e^-4	0.6	INTRON Eip63E
2R	8986997	2R_8986997_SNP [dm3] 2R_13099492_SNP [dm6]	A	T	1.407e^-4	0.6	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	22282256	3R_22282256_SNP [dm3] 3R_26456534_SNP [dm6]	T	C	1.410e^-4	0.6	UPSTREAM CG14237 & 1 other INTERGENIC
3L	13350421	3L_13350421_SNP [dm3] 3L_13357321_SNP [dm6]	A	T	1.411e^-4	0.6	DOWNSTREAM Nplp2 INTERGENIC
3L	13351749	3L_13351749_DEL [dm3] 3L_13358649_DEL [dm6]	AA	A	1.416e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	16665687	3L_16665687_SNP [dm3] 3L_16672587_SNP [dm6]	T	C	1.418e^-4	0.6	INTRON zetaCOP
3L	13344505	3L_13344505_SNP [dm3] 3L_13351405_SNP [dm6]	C	A	1.424e^-4	0.6	NON_SYNONYMOUS_CODING CG17687	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	11886562	2L_11886562_SNP [dm3] 2L_11886562_SNP [dm6]	G	A	1.427e^-4	0.6	INTRON Pde1c
X	11437274	X_11437274_DEL [dm3] X_11543241_DEL [dm6]	AAAA	A	1.429e^-4	0.6	INTRON Drak	TF binding site mE1_TFBS_HSA
X	15125186	X_15125186_SNP [dm3] X_15231153_SNP [dm6]	G	T	1.431e^-4	0.6	INTERGENIC
3R	6905417	3R_6905417_SNP [dm3] 3R_11079695_SNP [dm6]	C	A	1.432e^-4	0.6	INTERGENIC
2R	12603753	2R_12603753_SNP [dm3] 2R_16716248_SNP [dm6]	T	G	1.433e^-4	0.6	INTRON CG30463
3L	5649133	3L_5649133_SNP [dm3] 3L_5656033_SNP [dm6]	G	T	1.436e^-4	0.6	INTRON lin-28	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	10219064	3R_10219064_SNP [dm3] 3R_14393342_SNP [dm6]	G	A	1.443e^-4	0.6	SYNONYMOUS_CODING cv-c
2L	8390808	2L_8390808_SNP [dm3] 2L_8390808_SNP [dm6]	G	C	1.443e^-4	0.6	SYNONYMOUS_CODING CG42820 DOWNSTREAM snRNA:U6atac:29B	TF binding site mE1_TFBS_HSA
X	2106610	X_2106610_INS [dm3] X_2212577_INS [dm6]	T	TTCAA	1.444e^-4	0.6	UPSTREAM msta INTRON msta
X	2106614	X_2106614_SNP [dm3] X_2212581_SNP [dm6]	T	A	1.444e^-4	0.6	UPSTREAM msta INTRON msta
2L	10053577	2L_10053577_SNP [dm3] 2L_10053577_SNP [dm6]	C	A	1.444e^-4	0.6	UPSTREAM CR44875 & 1 other INTERGENIC
3L	14172702	3L_14172702_SNP [dm3] 3L_14179602_SNP [dm6]	A	C	1.446e^-4	0.6	UPSTREAM D INTERGENIC	regulatory region REDfly_CRMs
2L	11485286	2L_11485286_SNP [dm3] 2L_11485286_SNP [dm6]	T	C	1.454e^-4	0.6	SYNONYMOUS_CODING CG43355 UTR_5_PRIME sala UPSTREAM sala	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
X	16164469	X_16164469_SNP [dm3] X_16270436_SNP [dm6]	C	A	1.457e^-4	0.6	SYNONYMOUS_CODING kat80 UPSTREAM Mfe2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2R	18166482	2R_18166482_SNP [dm3] 2R_22278977_SNP [dm6]	T	C	1.460e^-4	0.6	INTRON dve
2R	16980876	2R_16980876_SNP [dm3] 2R_21093371_SNP [dm6]	G	C	1.460e^-4	0.6	INTRON CG34396
X	18390547	X_18390547_SNP [dm3] X_18496514_SNP [dm6]	T	C	1.463e^-4	0.6	SYNONYMOUS_CODING GalNAc-T2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10702422	2L_10702422_SNP [dm3] 2L_10702422_SNP [dm6]	A	C	1.465e^-4	0.6	NON_SYNONYMOUS_CODING Lip2 UPSTREAM Lip1
3L	6758493	3L_6758493_SNP [dm3] 3L_6765393_SNP [dm6]	G	T	1.466e^-4	0.6	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	5867929	X_5867929_SNP [dm3] X_5973896_SNP [dm6]	G	C	1.467e^-4	0.6	INTRON Grip
2L	11485037	2L_11485037_SNP [dm3] 2L_11485037_SNP [dm6]	T	C	1.468e^-4	0.6	INTRON CG43355 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	14171909	3L_14171909_SNP [dm3] 3L_14178809_SNP [dm6]	G	A	1.471e^-4	0.6	UPSTREAM D INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_Trl
2L	9890556	2L_9890556_SNP [dm3] 2L_9890556_SNP [dm6]	C	T	1.471e^-4	0.6	NON_SYNONYMOUS_CODING CG34183 UPSTREAM CG4537 DOWNSTREAM FKBP59 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
2L	13642828	2L_13642828_SNP [dm3] 2L_13642828_SNP [dm6]	G	A	1.475e^-4	0.6	UPSTREAM ics EXON CR44726	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
3L	6349633	3L_6349633_SNP [dm3] 3L_6356533_SNP [dm6]	C	T	1.479e^-4	0.6	INTERGENIC
X	7129479	X_7129479_INS [dm3] X_7235446_INS [dm6]	A	ATAG	1.483e^-4	0.6	INTRON CR44357 & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_Kr
2R	16736506	2R_16736506_SNP [dm3] 2R_20849001_SNP [dm6]	A	T	1.484e^-4	0.6	INTRON CG17999
3L	12876086	3L_12876086_SNP [dm3] 3L_12882986_SNP [dm6]	C	T	1.490e^-4	0.6	INTERGENIC
3L	5645415	3L_5645415_SNP [dm3] 3L_5652315_SNP [dm6]	C	T	1.492e^-4	0.6	DOWNSTREAM Blimp-1 INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	5717656	3L_5717656_SNP [dm3] 3L_5724556_SNP [dm6]	T	C	1.492e^-4	0.6	INTRON sif
2L	16797835	2L_16797835_SNP [dm3] 2L_16797835_SNP [dm6]	C	G	1.499e^-4	0.6	SYNONYMOUS_CODING Ugt36Bb	TF binding site mE1_TFBS_sens
2R	16709666	2R_16709666_SNP [dm3] 2R_20822161_SNP [dm6]	T	A	1.502e^-4	0.6	UTR_3_PRIME insc	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	13971298	2L_13971298_SNP [dm3] 2L_13971298_SNP [dm6]	T	C	1.506e^-4	0.6	SYNONYMOUS_CODING NimB5 DOWNSTREAM He	TF binding site mE1_TFBS_cad
2L	9929761	2L_9929761_SNP [dm3] 2L_9929761_SNP [dm6]	G	A	1.509e^-4	0.6	UPSTREAM CG42367 INTRON CG42366	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	15278080	3R_15278080_SNP [dm3] 3R_19452358_SNP [dm6]	A	T	1.513e^-4	0.6	INTRON CG31221	TF binding site mE1_TFBS_Kr
2R	20180387	2R_20180387_SNP [dm3] 2R_24292864_SNP [dm6]	G	T	1.516e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11229552	3L_11229552_SNP [dm3] 3L_11236452_SNP [dm6]	T	A	1.517e^-4	0.6	UPSTREAM Ir68a & 1 other DOWNSTREAM CR44718 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
2R	6056739	2R_6056739_DEL [dm3] 2R_10169234_DEL [dm6]	ATACAGGAAAATTCA...	A	1.520e^-4	0.6	INTRON KCNQ
2R	17100005	2R_17100005_SNP [dm3] 2R_21212500_SNP [dm6]	T	C	1.524e^-4	0.6	DOWNSTREAM CG4302 INTRON CG44245
X	8627619	X_8627619_SNP [dm3] X_8733586_SNP [dm6]	G	A	1.525e^-4	0.6	INTERGENIC
X	3020617	X_3020617_SNP [dm3] X_3126584_SNP [dm6]	G	C	1.527e^-4	0.6	INTRON kirre
3L	17000169	3L_17000169_SNP [dm3] 3L_17007069_SNP [dm6]	C	G	1.527e^-4	0.6	INTRON CG3764
3R	5202794	3R_5202794_SNP [dm3] 3R_9377072_SNP [dm6]	A	C	1.528e^-4	0.6	INTRON FER	TF binding site BDTNP1_TFBS_twi
2R	13340447	2R_13340447_SNP [dm3] 2R_17452942_SNP [dm6]	T	G	1.537e^-4	0.6	UPSTREAM CG10764 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA
2L	12386893	2L_12386893_INS [dm3] 2L_12386893_INS [dm6]	T	TAT	1.548e^-4	0.6	INTRON bru-2
2L	9766020	2L_9766020_SNP [dm3] 2L_9766020_SNP [dm6]	T	C	1.550e^-4	0.6	NON_SYNONYMOUS_CODING ppk18 DOWNSTREAM und
2L	16569875	2L_16569875_SNP [dm3] 2L_16569875_SNP [dm6]	T	C	1.551e^-4	0.6	INTRON CG42389
2L	13538180	2L_13538180_SNP [dm3] 2L_13538180_SNP [dm6]	T	G	1.557e^-4	0.6	INTRON B4
2L	2395003	2L_2395003_SNP [dm3] 2L_2395003_SNP [dm6]	G	C	1.561e^-4	0.6	INTRON VGlut
2L	8389585	2L_8389585_SNP [dm3] 2L_8389585_SNP [dm6]	A	G	1.566e^-4	0.6	UPSTREAM snRNA:U6atac:29B & 1 other DOWNSTREAM CG13384 & 1 other INTERGENIC
3L	17046794	3L_17046794_SNP [dm3] 3L_17053694_SNP [dm6]	A	T	1.567e^-4	0.6	INTRON rogdi	TF binding site BDTNP1_TFBS_da
3R	16521866	3R_16521866_SNP [dm3] 3R_20696144_SNP [dm6]	A	C	1.568e^-4	0.6	INTRON Oamb
2R	13691968	2R_13691968_SNP [dm3] 2R_17804463_SNP [dm6]	A	G	1.568e^-4	0.6	INTRON grh	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	17000015	3L_17000015_SNP [dm3] 3L_17006915_SNP [dm6]	G	A	1.572e^-4	0.6	INTRON CG3764
3L	2233144	3L_2233144_SNP [dm3] 3L_2233144_SNP [dm6]	A	T	1.574e^-4	0.6	SYNONYMOUS_CODING Oseg2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	17521176	2L_17521176_SNP [dm3] 2L_17521176_SNP [dm6]	T	C	1.575e^-4	0.6	SYNONYMOUS_CODING CG15143 INTRON Dhc36C
2R	16386629	2R_16386629_SNP [dm3] 2R_20499124_SNP [dm6]	G	C	1.580e^-4	0.6	INTERGENIC
3L	800338	3L_800338_SNP [dm3] 3L_800338_SNP [dm6]	A	G	1.581e^-4	0.6	INTERGENIC
3L	19346499	3L_19346499_SNP [dm3] 3L_19353399_SNP [dm6]	T	A	1.581e^-4	0.6	INTRON CG32206
3L	13351784	3L_13351784_SNP [dm3] 3L_13358684_SNP [dm6]	A	G	1.597e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2496736	2L_2496736_SNP [dm3] 2L_2496736_SNP [dm6]	G	C	1.598e^-4	0.6	SYNONYMOUS_CODING oaf UTR_3_PRIME oaf	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8289914	2L_8289914_SNP [dm3] 2L_8289914_SNP [dm6]	G	A	1.600e^-4	0.6	UPSTREAM tRNA:K5:29A INTRON Btk29A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
3R	15323813	3R_15323813_SNP [dm3] 3R_19498091_SNP [dm6]	C	T	1.600e^-4	0.6	INTRON Dys	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3L	13694963	3L_13694963_SNP [dm3] 3L_13701863_SNP [dm6]	C	A	1.604e^-4	0.6	INTRON bru-3
3L	13388203	3L_13388203_SNP [dm3] 3L_13395103_SNP [dm6]	A	T	1.605e^-4	0.6	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	8838346	3L_8838346_INS [dm3] 3L_8845246_INS [dm6]	C	CC	1.605e^-4	0.6	INTRON dally
3R	21182082	3R_21182082_SNP [dm3] 3R_25356360_SNP [dm6]	T	A	1.607e^-4	0.6	INTRON Fur1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	18808104	3L_18808104_SNP [dm3] 3L_18815004_SNP [dm6]	T	G	1.609e^-4	0.6	INTRON CG14073	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_zfh1
3L	2965795	3L_2965795_INS [dm3] 3L_2965795_INS [dm6]	A	AAATGTGG	1.612e^-4	0.6	INTERGENIC
2R	18165717	2R_18165717_SNP [dm3] 2R_22278212_SNP [dm6]	C	A	1.613e^-4	0.6	INTRON dve	TF binding site mE1_TFBS_HSA
3L	13351501	3L_13351501_SNP [dm3] 3L_13358401_SNP [dm6]	A	T	1.624e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13355281	3L_13355281_DEL [dm3] 3L_13362181_DEL [dm6]	CAGAGC	C	1.624e^-4	0.6	INTERGENIC
3L	7828795	3L_7828795_SNP [dm3] 3L_7835695_SNP [dm6]	C	T	1.625e^-4	0.6	INTRON Pdp1
3R	15323137	3R_15323137_SNP [dm3] 3R_19497415_SNP [dm6]	C	T	1.634e^-4	0.6	INTRON Dys
2R	12463194	2R_12463194_SNP [dm3] 2R_16575689_SNP [dm6]	A	G	1.638e^-4	0.6	UTR_5_PRIME CG8317 INTRON CG8317
3R	12763605	3R_12763605_SNP [dm3] 3R_16937883_SNP [dm6]	G	A	1.648e^-4	0.6	INTRON Abd-B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	12117274	2R_12117274_SNP [dm3] 2R_16229769_SNP [dm6]	C	A	1.657e^-4	0.6	NON_SYNONYMOUS_CODING Tsf3 UPSTREAM CG15701 INTRON CG15706	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Ubx
3L	12479244	3L_12479244_SNP [dm3] 3L_12486144_SNP [dm6]	A	T	1.659e^-4	0.6	DOWNSTREAM CG10660 INTRON CG33725	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	3868877	X_3868877_DEL [dm3] X_3974844_DEL [dm6]	CTT	C	1.662e^-4	0.6	INTERGENIC
X	3868881	X_3868881_SNP [dm3] X_3974848_SNP [dm6]	T	C	1.662e^-4	0.6	INTERGENIC
X	3868889	X_3868889_SNP [dm3] X_3974856_SNP [dm6]	G	A	1.662e^-4	0.6	INTERGENIC
X	3868891	X_3868891_SNP [dm3] X_3974858_SNP [dm6]	G	A	1.662e^-4	0.6	INTERGENIC
3L	13391327	3L_13391327_SNP [dm3] 3L_13398227_SNP [dm6]	A	T	1.667e^-4	0.6	INTRON sens	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	19377694	X_19377694_DEL [dm3] X_19483661_DEL [dm6]	GCTCTTTGAA	G	1.669e^-4	0.6	INTRON Nat1
2L	16428429	2L_16428429_SNP [dm3] 2L_16428429_SNP [dm6]	G	A	1.671e^-4	0.6	INTRON CG5888
2R	19950483	2R_19950483_SNP [dm3] 2R_24062960_SNP [dm6]	C	T	1.671e^-4	0.6	UPSTREAM Rap2l & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	7957278	2L_7957278_SNP [dm3] 2L_7957278_SNP [dm6]	T	C	1.674e^-4	0.6	INTRON Snoo
X	10411412	X_10411412_INS [dm3] X_10517379_INS [dm6]	A	AA	1.674e^-4	0.6	INTRON spri	TF binding site BDTNP1_TFBS_twi
3R	27066963	3R_27066963_SNP [dm3] 3R_31241241_SNP [dm6]	A	G	1.675e^-4	0.6	INTRON qless
2R	16747736	2R_16747736_SNP [dm3] 2R_20860231_SNP [dm6]	C	T	1.677e^-4	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	7930478	3L_7930478_SNP [dm3] 3L_7937378_SNP [dm6]	A	C	1.680e^-4	0.6	DOWNSTREAM Srp9 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	16798087	2L_16798087_SNP [dm3] 2L_16798087_SNP [dm6]	C	T	1.683e^-4	0.6	SYNONYMOUS_CODING Ugt36Bb UPSTREAM Ugt36Bc
X	15536705	X_15536705_SNP [dm3] X_15642672_SNP [dm6]	T	C	1.684e^-4	0.6	UPSTREAM CR44893 INTERGENIC
2R	18897619	2R_18897619_SNP [dm3] 2R_23010096_SNP [dm6]	A	T	1.685e^-4	0.6	DOWNSTREAM CG42741 INTRON twi	TF binding site mE1_TFBS_chinmo
2L	19121067	2L_19121067_SNP [dm3] 2L_19121067_SNP [dm6]	C	T	1.688e^-4	0.6	UPSTREAM Ddc DOWNSTREAM l_2_37Cc INTERGENIC	regulatory region REDfly_CRMs
3L	12641184	3L_12641184_SNP [dm3] 3L_12648084_SNP [dm6]	G	C	1.694e^-4	0.6	DOWNSTREAM CR43431 EXON CR32111	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	9113414	3L_9113414_SNP [dm3] 3L_9120314_SNP [dm6]	G	C	1.697e^-4	0.6	INTRON bol
3L	5880517	3L_5880517_SNP [dm3] 3L_5887417_SNP [dm6]	T	A	1.703e^-4	0.6	INTERGENIC
2L	12994344	2L_12994344_SNP [dm3] 2L_12994344_SNP [dm6]	T	A	1.703e^-4	0.6	INTRON CG12404
2R	19392903	2R_19392903_INS [dm3] 2R_23505380_INS [dm6]	C	CT	1.706e^-4	0.6	INTERGENIC
2L	8393146	2L_8393146_SNP [dm3] 2L_8393146_SNP [dm6]	C	T	1.708e^-4	0.6	SYNONYMOUS_CODING Acp29AB UPSTREAM CG42820 DOWNSTREAM lectin-29Ca
3L	13360526	3L_13360526_SNP [dm3] 3L_13367426_SNP [dm6]	G	A	1.723e^-4	0.6	INTERGENIC
2R	17140152	2R_17140152_SNP [dm3] 2R_21252647_SNP [dm6]	G	A	1.725e^-4	0.6	INTERGENIC
2L	894217	2L_894217_SNP [dm3] 2L_894217_SNP [dm6]	T	G	1.728e^-4	0.6	INTERGENIC
2L	12570512	2L_12570512_SNP [dm3] 2L_12570512_SNP [dm6]	A	T	1.734e^-4	0.6	DOWNSTREAM CR44598 & 1 other INTERGENIC
3L	3690317	3L_3690317_SNP [dm3] 3L_3690317_SNP [dm6]	C	T	1.734e^-4	0.6	DOWNSTREAM CR43484 INTERGENIC
3L	16665685	3L_16665685_SNP [dm3] 3L_16672585_SNP [dm6]	A	G	1.735e^-4	0.6	INTRON zetaCOP
2R	16478380	2R_16478380_SNP [dm3] 2R_20590875_SNP [dm6]	G	T	1.741e^-4	0.6	INTRON bl
3L	11451442	3L_11451442_SNP [dm3] 3L_11458342_SNP [dm6]	T	C	1.747e^-4	0.6	UTR_5_PRIME CG12289 UPSTREAM CG7551	TF binding site BDTNP1_TFBS_sna
2L	10053578	2L_10053578_SNP [dm3] 2L_10053578_SNP [dm6]	C	T	1.749e^-4	0.6	UPSTREAM CR44875 & 1 other INTERGENIC
2L	894228	2L_894228_SNP [dm3] 2L_894228_SNP [dm6]	C	T	1.751e^-4	0.6	INTERGENIC
3L	5344796	3L_5344796_SNP [dm3] 3L_5351696_SNP [dm6]	G	A	1.754e^-4	0.6	UPSTREAM lama INTRON lama
2L	16804956	2L_16804956_SNP [dm3] 2L_16804956_SNP [dm6]	C	T	1.759e^-4	0.6	START_GAINED CG13272 UTR_5_PRIME CG13272 UPSTREAM CG13280 INTRON CG13280
2R	4926539	2R_4926539_SNP [dm3] 2R_9039034_SNP [dm6]	G	A	1.759e^-4	0.6	DOWNSTREAM Ance-4 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
3L	4788754	3L_4788754_SNP [dm3] 3L_4788754_SNP [dm6]	G	T	1.760e^-4	0.6	INTRON RhoGEF64C	TF binding site mE1_TFBS_chinmo
2R	13145450	2R_13145450_SNP [dm3] 2R_17257945_SNP [dm6]	C	A	1.763e^-4	0.6	UPSTREAM CG43108 INTRON mbl
2L	7431668	2L_7431668_SNP [dm3] 2L_7431668_SNP [dm6]	T	G	1.763e^-4	0.6	INTRON CG5958
2L	7431671	2L_7431671_SNP [dm3] 2L_7431671_SNP [dm6]	A	T	1.763e^-4	0.6	INTRON CG5958
3R	4040573	3R_4040573_SNP [dm3] 3R_8214851_SNP [dm6]	A	T	1.778e^-4	0.6	INTERGENIC
X	16165696	X_16165696_SNP [dm3] X_16271663_SNP [dm6]	C	A	1.782e^-4	0.6	NON_SYNONYMOUS_CODING Mfe2 INTRON kat80	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2L	8139218	2L_8139218_SNP [dm3] 2L_8139218_SNP [dm6]	C	G	1.783e^-4	0.6	NON_SYNONYMOUS_CODING CG8552 START_GAINED CG8552 UTR_5_PRIME CG8552	TF binding site mE1_TFBS_cad
2R	4926653	2R_4926653_SNP [dm3] 2R_9039148_SNP [dm6]	A	T	1.784e^-4	0.6	DOWNSTREAM Ance-4 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo
3L	11878580	3L_11878580_INS [dm3] 3L_11885480_INS [dm6]	G	GCTTTTAATGTAG...	1.785e^-4	0.6	INTRON CG44837
2R	14552223	2R_14552223_SNP [dm3] 2R_18664718_SNP [dm6]	T	A	1.788e^-4	0.6	UTR_3_PRIME CG33136
3L	19258169	3L_19258169_SNP [dm3] 3L_19265069_SNP [dm6]	C	T	1.790e^-4	0.6	SYNONYMOUS_CODING CG9666 UTR_3_PRIME CG42374 UPSTREAM Max & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15370182	3R_15370182_SNP [dm3] 3R_19544460_SNP [dm6]	T	A	1.793e^-4	0.6	INTRON Dys
2L	18744158	2L_18744158_SNP [dm3] 2L_18744158_SNP [dm6]	T	A	1.804e^-4	0.6	INTERGENIC
2L	18744159	2L_18744159_SNP [dm3] 2L_18744159_SNP [dm6]	G	T	1.804e^-4	0.6	INTERGENIC
3L	14142084	3L_14142084_SNP [dm3] 3L_14148984_SNP [dm6]	T	A	1.804e^-4	0.6	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2R	6942081	2R_6942081_SNP [dm3] 2R_11054576_SNP [dm6]	A	C	1.810e^-4	0.6	INTRON luna
X	6864060	X_6864060_SNP [dm3] X_6970027_SNP [dm6]	A	G	1.810e^-4	0.6	NON_SYNONYMOUS_CODING CG4586	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	7238665	X_7238665_SNP [dm3] X_7344632_SNP [dm6]	T	C	1.813e^-4	0.6	INTRON CR44357 & 1 other
2L	6791795	2L_6791795_SNP [dm3] 2L_6791795_SNP [dm6]	G	T	1.814e^-4	0.6	SYNONYMOUS_CODING nrv2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	16961936	2R_16961936_SNP [dm3] 2R_21074431_SNP [dm6]	T	G	1.821e^-4	0.6	INTRON Treh
2L	1677421	2L_1677421_SNP [dm3] 2L_1677421_SNP [dm6]	C	G	1.822e^-4	0.6	INTRON chinmo
2L	12358912	2L_12358912_SNP [dm3] 2L_12358912_SNP [dm6]	G	C	1.826e^-4	0.6	INTRON bru-2
2L	18986450	2L_18986450_SNP [dm3] 2L_18986450_SNP [dm6]	T	C	1.829e^-4	0.6	INTRON Swip-1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
3R	14166002	3R_14166002_SNP [dm3] 3R_18340280_SNP [dm6]	G	T	1.832e^-4	0.6	INTRON CG15803
2L	892560	2L_892560_SNP [dm3] 2L_892560_SNP [dm6]	C	T	1.832e^-4	0.6	INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	13346912	3L_13346912_SNP [dm3] 3L_13353812_SNP [dm6]	A	C	1.835e^-4	0.6	INTRON CG17687
2R	16736212	2R_16736212_SNP [dm3] 2R_20848707_SNP [dm6]	A	G	1.841e^-4	0.6	SYNONYMOUS_CODING CG17999	TF binding site mE1_TFBS_chinmo
2R	13341295	2R_13341295_SNP [dm3] 2R_17453790_SNP [dm6]	A	G	1.842e^-4	0.6	INTRON CG10764
2L	2251390	2L_2251390_SNP [dm3] 2L_2251390_SNP [dm6]	A	T	1.843e^-4	0.6	UPSTREAM Ser12 DOWNSTREAM CG17239 INTERGENIC
3R	26434102	3R_26434102_SNP [dm3] 3R_30608380_SNP [dm6]	A	G	1.846e^-4	0.6	UTR_3_PRIME CG31016 DOWNSTREAM CG31016
3L	13388122	3L_13388122_SNP [dm3] 3L_13395022_SNP [dm6]	A	G	1.856e^-4	0.602	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
3L	17819244	3L_17819244_SNP [dm3] 3L_17826144_SNP [dm6]	G	A	1.862e^-4	0.603	INTRON Grd
2L	10053627	2L_10053627_SNP [dm3] 2L_10053627_SNP [dm6]	C	G	1.870e^-4	0.605	UPSTREAM Cpr31A EXON CR44875
3L	11215468	3L_11215468_SNP [dm3] 3L_11222368_SNP [dm6]	A	T	1.873e^-4	0.605	INTRON CG42671
2L	8268683	2L_8268683_SNP [dm3] 2L_8268683_SNP [dm6]	C	G	1.885e^-4	0.606	INTRON Btk29A	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	6663355	3L_6663355_SNP [dm3] 3L_6670255_SNP [dm6]	G	A	1.888e^-4	0.606	INTERGENIC
3R	14336286	3R_14336286_SNP [dm3] 3R_18510564_SNP [dm6]	C	T	1.888e^-4	0.606	INTRON fru
2R	19463984	2R_19463984_SNP [dm3] 2R_23576461_SNP [dm6]	T	A	1.900e^-4	0.609	INTRON apt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	12338456	3L_12338456_SNP [dm3] 3L_12345356_SNP [dm6]	T	C	1.907e^-4	0.61	INTRON CrzR
2L	7956586	2L_7956586_SNP [dm3] 2L_7956586_SNP [dm6]	T	C	1.922e^-4	0.613	INTRON Snoo	TF binding site mE1_TFBS_inv
3L	5418527	3L_5418527_SNP [dm3] 3L_5425427_SNP [dm6]	A	T	1.923e^-4	0.613	INTRON CG34391	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	9478027	3L_9478027_SNP [dm3] 3L_9484927_SNP [dm6]	T	C	1.929e^-4	0.613	SYNONYMOUS_CODING Jarid2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	13720617	3R_13720617_SNP [dm3] 3R_17894895_SNP [dm6]	G	C	1.941e^-4	0.613	SYNONYMOUS_CODING Rim INTRON Rim	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo
3L	5345471	3L_5345471_SNP [dm3] 3L_5352371_SNP [dm6]	C	A	1.943e^-4	0.613	UPSTREAM lama INTRON lama	TF binding site BDTNP1_TFBS_dl mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens
2L	2339632	2L_2339632_SNP [dm3] 2L_2339632_SNP [dm6]	C	A	1.944e^-4	0.613	NON_SYNONYMOUS_CODING eys INTRON CG9967
2L	3427316	2L_3427316_SNP [dm3] 2L_3427316_SNP [dm6]	T	A	1.945e^-4	0.613	UPSTREAM pgant2 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	12821965	3L_12821965_SNP [dm3] 3L_12828865_SNP [dm6]	G	T	1.953e^-4	0.613	INTRON CG10960
3L	12216552	3L_12216552_SNP [dm3] 3L_12223452_SNP [dm6]	A	G	1.955e^-4	0.613	INTRON app
2R	16535323	2R_16535323_SNP [dm3] 2R_20647818_SNP [dm6]	T	A	1.964e^-4	0.613	INTRON Lrt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_sbb
X	2871727	X_2871727_SNP [dm3] X_2977694_SNP [dm6]	G	C	1.964e^-4	0.613	INTRON kirre
2L	13170421	2L_13170421_SNP [dm3] 2L_13170421_SNP [dm6]	G	T	1.966e^-4	0.613	UTR_3_PRIME Sfmbt DOWNSTREAM Sir2
3L	5133258	3L_5133258_SNP [dm3] 3L_5140158_SNP [dm6]	A	G	1.968e^-4	0.613	SYNONYMOUS_CODING CHMP2B UPSTREAM Prpk DOWNSTREAM CG10672	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2L	11484978	2L_11484978_SNP [dm3] 2L_11484978_SNP [dm6]	A	T	1.970e^-4	0.613	UTR_5_PRIME sala & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	10688912	3R_10688912_SNP [dm3] 3R_14863190_SNP [dm6]	T	C	1.974e^-4	0.613	INTRON btsz
2R	2856217	2R_2856217_SNP [dm3] 2R_6968712_SNP [dm6]	G	C	1.975e^-4	0.613	INTRON mim & 1 other
3L	13889615	3L_13889615_INS [dm3] 3L_13896515_INS [dm6]	A	AGA	1.981e^-4	0.613	INTRON dysc
3R	13855403	3R_13855403_SNP [dm3] 3R_18029681_SNP [dm6]	C	T	1.991e^-4	0.613	INTERGENIC
2L	18441401	2L_18441401_SNP [dm3] 2L_18441401_SNP [dm6]	C	T	1.995e^-4	0.613	UTR_3_PRIME RpS26 DOWNSTREAM RpS26	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_zfh1
2R	16468036	2R_16468036_SNP [dm3] 2R_20580531_SNP [dm6]	T	C	1.999e^-4	0.613	INTRON qsm
2L	8139273	2L_8139273_SNP [dm3] 2L_8139273_SNP [dm6]	T	C	2.001e^-4	0.613	NON_SYNONYMOUS_CODING CG8552 START_GAINED CG8552 UTR_5_PRIME CG8552	TF binding site mE1_TFBS_cad
3R	22938160	3R_22938160_SNP [dm3] 3R_27112438_SNP [dm6]	C	G	2.006e^-4	0.613	UPSTREAM CG5815 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
3R	18765514	3R_18765514_SNP [dm3] 3R_22939792_SNP [dm6]	G	C	2.013e^-4	0.613	INTRON klg
3R	8094866	3R_8094866_SNP [dm3] 3R_12269144_SNP [dm6]	G	A	2.015e^-4	0.613	INTRON svp & 1 other
X	5974896	X_5974896_INS [dm3] X_6080863_INS [dm6]	A	ACA	2.018e^-4	0.613	INTRON CG4660	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	14622061	2R_14622061_SNP [dm3] 2R_18734556_SNP [dm6]	C	A	2.022e^-4	0.613	INTRON Hs3st-A
3L	13367227	3L_13367227_SNP [dm3] 3L_13374127_SNP [dm6]	G	C	2.022e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	16757265	3R_16757265_SNP [dm3] 3R_20931543_SNP [dm6]	G	A	2.024e^-4	0.613	INTRON CG31191
3R	7299180	3R_7299180_SNP [dm3] 3R_11473458_SNP [dm6]	G	T	2.026e^-4	0.613	INTERGENIC
2R	12679699	2R_12679699_SNP [dm3] 2R_16792194_SNP [dm6]	C	T	2.029e^-4	0.613	UTR_3_PRIME CG5522 UPSTREAM CG15919 DOWNSTREAM CG5522 & 1 other
3L	6511815	3L_6511815_SNP [dm3] 3L_6518715_SNP [dm6]	C	G	2.037e^-4	0.613	INTRON sfl
X	5867932	X_5867932_SNP [dm3] X_5973899_SNP [dm6]	G	A	2.043e^-4	0.613	INTRON Grip
2L	8113189	2L_8113189_SNP [dm3] 2L_8113189_SNP [dm6]	C	A	2.055e^-4	0.613	UTR_3_PRIME Bsg
3L	9113339	3L_9113339_SNP [dm3] 3L_9120239_SNP [dm6]	C	T	2.055e^-4	0.613	INTRON bol
3L	13383700	3L_13383700_SNP [dm3] 3L_13390600_SNP [dm6]	T	A	2.058e^-4	0.613	UPSTREAM Poc1 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	11624408	3L_11624408_SNP [dm3] 3L_11631308_SNP [dm6]	G	T	2.058e^-4	0.613	UPSTREAM CG32091 DOWNSTREAM CG18815 INTERGENIC
2R	8534231	2R_8534231_SNP [dm3] 2R_12646726_SNP [dm6]	G	T	2.061e^-4	0.613	INTRON CG8785
3L	11451453	3L_11451453_SNP [dm3] 3L_11458353_SNP [dm6]	T	A	2.062e^-4	0.613	UTR_5_PRIME CG12289 UPSTREAM CG7551	TF binding site BDTNP1_TFBS_sna
2R	10836673	2R_10836673_SNP [dm3] 2R_14949168_SNP [dm6]	T	A	2.066e^-4	0.613	INTRON aPKC
2R	15032818	2R_15032818_DEL [dm3] 2R_19145313_DEL [dm6]	AA	A	2.067e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
2R	17235521	2R_17235521_SNP [dm3] 2R_21348016_SNP [dm6]	C	T	2.068e^-4	0.613	UPSTREAM CG9822 DOWNSTREAM CG17974 INTERGENIC
2R	18448684	2R_18448684_SNP [dm3] 2R_22561179_SNP [dm6]	G	C	2.070e^-4	0.613	INTRON px	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn
2L	17781419	2L_17781419_SNP [dm3] 2L_17781419_SNP [dm6]	A	T	2.078e^-4	0.613	INTERGENIC
2L	22149476	2L_22149476_SNP [dm3] 2L_22149476_SNP [dm6]	A	T	2.079e^-4	0.613	INTRON CG42748	TF binding site BDTNP1_TFBS_dl
2R	17860215	2R_17860215_SNP [dm3] 2R_21972710_SNP [dm6]	T	A	2.086e^-4	0.613	UPSTREAM CG9304 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	16931023	3L_16931023_SNP [dm3] 3L_16937923_SNP [dm6]	T	C	2.090e^-4	0.613	DOWNSTREAM CG13022 INTERGENIC
3L	10270665	3L_10270665_SNP [dm3] 3L_10277565_SNP [dm6]	T	A	2.094e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2R	13140695	2R_13140695_SNP [dm3] 2R_17253190_SNP [dm6]	T	A	2.095e^-4	0.613	DOWNSTREAM CR43660 INTRON mbl	TF binding site BDTNP1_TFBS_twi
3L	13369279	3L_13369279_SNP [dm3] 3L_13376179_SNP [dm6]	C	T	2.098e^-4	0.613	INTERGENIC
2R	18853277	2R_18853277_SNP [dm3] 2R_22965754_SNP [dm6]	A	G	2.106e^-4	0.613	INTERGENIC
2L	12357126	2L_12357126_SNP [dm3] 2L_12357126_SNP [dm6]	T	A	2.110e^-4	0.613	SYNONYMOUS_CODING CG17010 INTRON bru-2	TF binding site mE1_TFBS_chinmo
2R	16736303	2R_16736303_SNP [dm3] 2R_20848798_SNP [dm6]	A	G	2.114e^-4	0.613	SYNONYMOUS_CODING CG17999	TF binding site mE1_TFBS_chinmo
3L	5239169	3L_5239169_SNP [dm3] 3L_5246069_SNP [dm6]	A	C	2.114e^-4	0.613	INTRON shep
X	2095778	X_2095778_SNP [dm3] X_2201745_SNP [dm6]	G	A	2.117e^-4	0.613	DOWNSTREAM CG18031 INTRON Mct1 EXON CR43637
2R	9961104	2R_9961104_SNP [dm3] 2R_14073599_SNP [dm6]	T	C	2.121e^-4	0.613	INTRON Prosap	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	5132428	3L_5132428_SNP [dm3] 3L_5139328_SNP [dm6]	G	A	2.134e^-4	0.613	SYNONYMOUS_CODING Prpk UPSTREAM CHMP2B DOWNSTREAM CG4611	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA
2R	17980789	2R_17980789_SNP [dm3] 2R_22093284_SNP [dm6]	G	T	2.139e^-4	0.613	NON_SYNONYMOUS_CODING CG11073 INTRON CG11073	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	5133459	3L_5133459_SNP [dm3] 3L_5140359_SNP [dm6]	A	G	2.140e^-4	0.613	SYNONYMOUS_CODING CHMP2B UPSTREAM Prpk DOWNSTREAM CG10672	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	2101359	X_2101359_SNP [dm3] X_2207326_SNP [dm6]	G	T	2.142e^-4	0.613	INTRON msta
3R	26024576	3R_26024576_SNP [dm3] 3R_30198854_SNP [dm6]	T	G	2.147e^-4	0.613	NON_SYNONYMOUS_CODING CG9743	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	16935350	2R_16935350_SNP [dm3] 2R_21047845_SNP [dm6]	C	G	2.150e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
2L	9413671	2L_9413671_SNP [dm3] 2L_9413671_SNP [dm6]	A	T	2.152e^-4	0.613	INTRON Shawl
3L	11146917	3L_11146917_SNP [dm3] 3L_11153817_SNP [dm6]	C	G	2.155e^-4	0.613	INTRON CG32082
3L	14265015	3L_14265015_SNP [dm3] 3L_14271915_SNP [dm6]	T	G	2.156e^-4	0.613	INTERGENIC
X	6678458	X_6678458_SNP [dm3] X_6784425_SNP [dm6]	G	A	2.157e^-4	0.613	SYNONYMOUS_CODING C3G	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	9796088	X_9796088_SNP [dm3] X_9902055_SNP [dm6]	A	G	2.161e^-4	0.613	INTERGENIC
3L	9465775	3L_9465775_SNP [dm3] 3L_9472675_SNP [dm6]	G	T	2.171e^-4	0.613	DOWNSTREAM CG44838 INTRON CG44838
2R	3776384	2R_3776384_DEL [dm3] 2R_7888879_DEL [dm6]	GAATTTTA	G	2.175e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	17781412	2L_17781412_SNP [dm3] 2L_17781412_SNP [dm6]	G	A	2.180e^-4	0.613	INTERGENIC
2R	13906266	2R_13906266_DEL [dm3] 2R_18018761_DEL [dm6]	ATAGCGTATA	A	2.182e^-4	0.613	INTRON CG5084
3L	15711997	3L_15711997_SNP [dm3] 3L_15718897_SNP [dm6]	T	C	2.183e^-4	0.613	SYNONYMOUS_CODING CG42570
3R	23622413	3R_23622413_SNP [dm3] 3R_27796691_SNP [dm6]	A	G	2.194e^-4	0.613	INTRON CG34353
2R	11605560	2R_11605560_SNP [dm3] 2R_15718055_SNP [dm6]	T	A	2.194e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	16773454	2L_16773454_SNP [dm3] 2L_16773454_SNP [dm6]	C	T	2.216e^-4	0.613	INTRON Mhc	TF binding site BDTNP1_TFBS_twi
2L	703437	2L_703437_SNP [dm3] 2L_703437_SNP [dm6]	G	A	2.218e^-4	0.613	INTRON ds
2R	16736372	2R_16736372_SNP [dm3] 2R_20848867_SNP [dm6]	G	A	2.221e^-4	0.613	SYNONYMOUS_CODING CG17999	TF binding site mE1_TFBS_chinmo
3L	13364010	3L_13364010_SNP [dm3] 3L_13370910_SNP [dm6]	G	T	2.222e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_cad
2R	10286825	2R_10286825_SNP [dm3] 2R_14399320_SNP [dm6]	A	G	2.224e^-4	0.613	INTERGENIC
X	6570941	X_6570941_SNP [dm3] X_6676908_SNP [dm6]	G	A	2.224e^-4	0.613	SYNONYMOUS_CODING Mcm6 DOWNSTREAM CG3192	TF binding site mE1_TFBS_cad
2L	1215249	2L_1215249_SNP [dm3] 2L_1215249_SNP [dm6]	A	T	2.226e^-4	0.613	EXON CR45346
2L	2389562	2L_2389562_SNP [dm3] 2L_2389562_SNP [dm6]	T	C	2.235e^-4	0.613	DOWNSTREAM CG43750 INTERGENIC
3L	13391279	3L_13391279_DEL [dm3] 3L_13398179_DEL [dm6]	CCGCATGGTC	C	2.239e^-4	0.613	INTRON sens	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	11750372	2L_11750372_SNP [dm3] 2L_11750372_SNP [dm6]	G	A	2.241e^-4	0.613	INTERGENIC
2R	15028976	2R_15028976_SNP [dm3] 2R_19141471_SNP [dm6]	T	C	2.241e^-4	0.613	UPSTREAM ena DOWNSTREAM CG15111 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_Trl
2L	12302157	2L_12302157_SNP [dm3] 2L_12302157_SNP [dm6]	G	A	2.250e^-4	0.613	INTRON aret
2L	9914478	2L_9914478_SNP [dm3] 2L_9914478_SNP [dm6]	C	T	2.251e^-4	0.613	SYNONYMOUS_CODING Srp54 UPSTREAM yip2
3R	22937819	3R_22937819_SNP [dm3] 3R_27112097_SNP [dm6]	C	A	2.258e^-4	0.613	UTR_5_PRIME gb UPSTREAM CG5815 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15099343	3R_15099343_SNP [dm3] 3R_19273621_SNP [dm6]	T	A	2.260e^-4	0.613	INTERGENIC
2R	8846588	2R_8846588_SNP [dm3] 2R_12959083_SNP [dm6]	A	T	2.263e^-4	0.613	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	9874516	2L_9874516_SNP [dm3] 2L_9874516_SNP [dm6]	C	A	2.266e^-4	0.613	INTRON nAChRalpha6
2R	13887530	2R_13887530_SNP [dm3] 2R_18000025_SNP [dm6]	T	C	2.269e^-4	0.613	INTRON dpr13
2R	13887531	2R_13887531_SNP [dm3] 2R_18000026_SNP [dm6]	G	A	2.269e^-4	0.613	INTRON dpr13
X	2104265	X_2104265_SNP [dm3] X_2210232_SNP [dm6]	G	A	2.274e^-4	0.613	INTRON msta
3L	13889613	3L_13889613_SNP [dm3] 3L_13896513_SNP [dm6]	T	A	2.278e^-4	0.613	INTRON dysc
X	15164613	X_15164613_SNP [dm3] X_15270580_SNP [dm6]	T	G	2.281e^-4	0.613	DOWNSTREAM CG9106 INTERGENIC
3L	12338458	3L_12338458_SNP [dm3] 3L_12345358_SNP [dm6]	G	C	2.283e^-4	0.613	INTRON CrzR
2L	16433343	2L_16433343_SNP [dm3] 2L_16433343_SNP [dm6]	A	T	2.284e^-4	0.613	INTRON CG5888
X	10053954	X_10053954_SNP [dm3] X_10159921_SNP [dm6]	G	A	2.298e^-4	0.613	INTRON CR44894 & 1 other
X	8961442	X_8961442_SNP [dm3] X_9067409_SNP [dm6]	C	A	2.300e^-4	0.613	INTRON CG15365
X	7813278	X_7813278_SNP [dm3] X_7919245_SNP [dm6]	T	A	2.302e^-4	0.613	NON_SYNONYMOUS_CODING hdm DOWNSTREAM snz	TF binding site mE1_TFBS_chinmo
3L	5649343	3L_5649343_SNP [dm3] 3L_5656243_SNP [dm6]	A	C	2.309e^-4	0.613	INTRON lin-28	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
X	15149514	X_15149514_SNP [dm3] X_15255481_SNP [dm6]	C	T	2.313e^-4	0.613	INTERGENIC
3L	11330973	3L_11330973_SNP [dm3] 3L_11337873_SNP [dm6]	C	A	2.318e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	8265161	2L_8265161_SNP [dm3] 2L_8265161_SNP [dm6]	A	C	2.318e^-4	0.613	INTRON Btk29A
2L	17071749	2L_17071749_SNP [dm3] 2L_17071749_SNP [dm6]	G	T	2.318e^-4	0.613	INTERGENIC
2L	9877192	2L_9877192_SNP [dm3] 2L_9877192_SNP [dm6]	A	G	2.329e^-4	0.613	UTR_5_PRIME nAChRalpha6 INTRON nAChRalpha6
3R	5712550	3R_5712550_SNP [dm3] 3R_9886828_SNP [dm6]	A	G	2.331e^-4	0.613	INTRON Glut4EF	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	5478782	2R_5478782_SNP [dm3] 2R_9591277_SNP [dm6]	T	C	2.332e^-4	0.613	SYNONYMOUS_CODING Map60 DOWNSTREAM CG1827 INTRON clos	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
X	17875070	X_17875070_SNP [dm3] X_17981037_SNP [dm6]	T	G	2.332e^-4	0.613	INTRON Sh
3L	13927403	3L_13927403_SNP [dm3] 3L_13934303_SNP [dm6]	G	C	2.335e^-4	0.613	UTR_3_PRIME Gl	TF binding site mE1_TFBS_cad
2R	7636119	2R_7636119_INS [dm3] 2R_11748614_INS [dm6]	T	TTT	2.335e^-4	0.613	INTERGENIC
3L	16268468	3L_16268468_SNP [dm3] 3L_16275368_SNP [dm6]	A	G	2.336e^-4	0.613	INTERGENIC
2R	16123446	2R_16123446_INS [dm3] 2R_20235941_INS [dm6]	T	TTACTCCTTAT...	2.340e^-4	0.613	UTR_3_PRIME CG44625 UPSTREAM CG11099 DOWNSTREAM CG44624
3L	13696996	3L_13696996_SNP [dm3] 3L_13703896_SNP [dm6]	A	G	2.340e^-4	0.613	INTRON bru-3
3L	8310933	3L_8310933_SNP [dm3] 3L_8317833_SNP [dm6]	T	C	2.353e^-4	0.613	DOWNSTREAM CG43059 INTERGENIC
2L	7968714	2L_7968714_SNP [dm3] 2L_7968714_SNP [dm6]	A	T	2.358e^-4	0.613	INTRON Snoo
3R	9891436	3R_9891436_SNP [dm3] 3R_14065714_SNP [dm6]	A	C	2.361e^-4	0.613	INTRON foxo
3R	8237425	3R_8237425_SNP [dm3] 3R_12411703_SNP [dm6]	A	C	2.363e^-4	0.613	UTR_3_PRIME CG5196 DOWNSTREAM Dip-C	TF binding site mE1_TFBS_cad
3L	9153073	3L_9153073_SNP [dm3] 3L_9159973_SNP [dm6]	G	T	2.367e^-4	0.613	INTRON Rdl
2R	6942078	2R_6942078_SNP [dm3] 2R_11054573_SNP [dm6]	G	C	2.371e^-4	0.613	INTRON luna
2R	6672485	2R_6672485_SNP [dm3] 2R_10784980_SNP [dm6]	G	T	2.373e^-4	0.613	DOWNSTREAM CR44300 INTRON CG33144 EXON CR44299
3L	14172481	3L_14172481_INS [dm3] 3L_14179381_INS [dm6]	T	TCCAACAGA	2.374e^-4	0.613	UPSTREAM D INTERGENIC	regulatory region REDfly_CRMs
X	6265543	X_6265543_SNP [dm3] X_6371510_SNP [dm6]	C	T	2.375e^-4	0.613	UTR_3_PRIME PpV UPSTREAM CR44816 DOWNSTREAM Marf
3L	18756221	3L_18756221_SNP [dm3] 3L_18763121_SNP [dm6]	T	A	2.378e^-4	0.613	INTRON ftz-f1
3L	7465401	3L_7465401_SNP [dm3] 3L_7472301_SNP [dm6]	C	G	2.386e^-4	0.613	NON_SYNONYMOUS_CODING CG8541	TF binding site mE1_TFBS_cad
3L	14377121	3L_14377121_SNP [dm3] 3L_14384021_SNP [dm6]	T	C	2.388e^-4	0.613	DOWNSTREAM CG43120 INTERGENIC
2L	975666	2L_975666_DEL [dm3] 2L_975666_DEL [dm6]	AA	A	2.392e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_hb
3R	5103467	3R_5103467_SNP [dm3] 3R_9277745_SNP [dm6]	T	C	2.392e^-4	0.613	INTERGENIC
2L	10436455	2L_10436455_SNP [dm3] 2L_10436455_SNP [dm6]	C	A	2.397e^-4	0.613	UPSTREAM CG5337 INTRON holn1	TF binding site mE1_TFBS_sens
2R	5477763	2R_5477763_SNP [dm3] 2R_9590258_SNP [dm6]	T	C	2.401e^-4	0.613	SYNONYMOUS_CODING CG1827 UPSTREAM Map60 INTRON clos	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10670136	2L_10670136_SNP [dm3] 2L_10670136_SNP [dm6]	C	T	2.403e^-4	0.613	INTRON CG31871
2L	7668864	2L_7668864_SNP [dm3] 2L_7668864_SNP [dm6]	C	T	2.404e^-4	0.613	INTRON Slob & 1 other
X	17874951	X_17874951_SNP [dm3] X_17980918_SNP [dm6]	C	G	2.406e^-4	0.613	INTRON Sh
3L	7064001	3L_7064001_SNP [dm3] 3L_7070901_SNP [dm6]	C	A	2.412e^-4	0.613	INTRON CG8641
3R	14788663	3R_14788663_SNP [dm3] 3R_18962941_SNP [dm6]	T	C	2.417e^-4	0.613	INTRON CG42613 & 1 other
3R	13803605	3R_13803605_SNP [dm3] 3R_17977883_SNP [dm6]	T	A	2.418e^-4	0.613	INTRON cpo
3L	9084931	3L_9084931_SNP [dm3] 3L_9091831_SNP [dm6]	C	T	2.420e^-4	0.613	INTRON Tequila
2R	13887549	2R_13887549_SNP [dm3] 2R_18000044_SNP [dm6]	T	A	2.420e^-4	0.613	INTRON dpr13
X	16165160	X_16165160_DEL [dm3] X_16271127_DEL [dm6]	TGT	T	2.422e^-4	0.613	UPSTREAM Mfe2 INTRON kat80 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens
3L	12541137	3L_12541137_SNP [dm3] 3L_12548037_SNP [dm6]	A	G	2.428e^-4	0.613	INTRON sowah
3R	8422633	3R_8422633_SNP [dm3] 3R_12596911_SNP [dm6]	C	G	2.429e^-4	0.613	INTERGENIC
2R	8853473	2R_8853473_SNP [dm3] 2R_12965968_SNP [dm6]	G	C	2.439e^-4	0.613	DOWNSTREAM Psc INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13927461	3L_13927461_SNP [dm3] 3L_13934361_SNP [dm6]	C	A	2.441e^-4	0.613	UTR_3_PRIME Gl	TF binding site mE1_TFBS_cad
3L	9697955	3L_9697955_SNP [dm3] 3L_9704855_SNP [dm6]	C	A	2.447e^-4	0.613	NON_SYNONYMOUS_CODING CG16711	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	586914	2L_586914_SNP [dm3] 2L_586914_SNP [dm6]	C	T	2.455e^-4	0.613	INTRON Gsc	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_chinmo mE1_TFBS_HSA
2R	13906463	2R_13906463_SNP [dm3] 2R_18018958_SNP [dm6]	C	G	2.458e^-4	0.613	INTRON CG5084
X	16163802	X_16163802_SNP [dm3] X_16269769_SNP [dm6]	T	G	2.458e^-4	0.613	INTRON kat80
3L	14390221	3L_14390221_SNP [dm3] 3L_14397121_SNP [dm6]	G	A	2.458e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	16277728	2R_16277728_SNP [dm3] 2R_20390223_SNP [dm6]	G	A	2.460e^-4	0.613	INTERGENIC
3L	16224762	3L_16224762_SNP [dm3] 3L_16231662_SNP [dm6]	G	A	2.472e^-4	0.613	UPSTREAM MED10 DOWNSTREAM CG5027 INTRON PDCD-5	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_Ubx
2L	19915804	2L_19915804_SNP [dm3] 2L_19915804_SNP [dm6]	T	C	2.472e^-4	0.613	INTRON sick	TF binding site mE1_TFBS_bab1
2L	6826581	2L_6826581_SNP [dm3] 2L_6826581_SNP [dm6]	C	T	2.477e^-4	0.613	INTRON sens-2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2R	12160824	2R_12160824_SNP [dm3] 2R_16273319_SNP [dm6]	G	A	2.478e^-4	0.613	SYNONYMOUS_CODING CG33017	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	2238641	3L_2238641_SNP [dm3] 3L_2238641_SNP [dm6]	T	G	2.488e^-4	0.613	INTRON ACXD
3L	11878592	3L_11878592_SNP [dm3] 3L_11885492_SNP [dm6]	T	A	2.494e^-4	0.613	INTRON CG44837
3R	7161706	3R_7161706_SNP [dm3] 3R_11335984_SNP [dm6]	G	A	2.494e^-4	0.613	INTRON pros	TF binding site BDTNP1_TFBS_dl
3L	13694957	3L_13694957_SNP [dm3] 3L_13701857_SNP [dm6]	C	T	2.497e^-4	0.613	INTRON bru-3
3R	14174300	3R_14174300_SNP [dm3] 3R_18348578_SNP [dm6]	C	T	2.499e^-4	0.613	INTRON CG15803
3L	9113306	3L_9113306_SNP [dm3] 3L_9120206_SNP [dm6]	C	G	2.505e^-4	0.613	INTRON bol
2R	20565526	2R_20565526_SNP [dm3] 2R_24678003_SNP [dm6]	T	C	2.508e^-4	0.613	INTRON Mmp1
2L	18039180	2L_18039180_SNP [dm3] 2L_18039180_SNP [dm6]	C	G	2.510e^-4	0.613	INTRON rdo
3L	17212703	3L_17212703_SNP [dm3] 3L_17219603_SNP [dm6]	A	G	2.514e^-4	0.613	INTRON Rbp6
2L	9141209	2L_9141209_SNP [dm3] 2L_9141209_SNP [dm6]	A	T	2.518e^-4	0.613	INTRON CG32982
3L	17027139	3L_17027139_SNP [dm3] 3L_17034039_SNP [dm6]	T	A	2.521e^-4	0.613	UPSTREAM CR43250 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	13887505	2R_13887505_SNP [dm3] 2R_18000000_SNP [dm6]	T	C	2.523e^-4	0.613	INTRON dpr13
2R	13887513	2R_13887513_DEL [dm3] 2R_18000008_DEL [dm6]	AGCTTCAATATGGC...	A	2.523e^-4	0.613	INTRON dpr13
2R	13887540	2R_13887540_DEL [dm3] 2R_18000035_DEL [dm6]	TG	T	2.523e^-4	0.613	INTRON dpr13
2R	13887546	2R_13887546_SNP [dm3] 2R_18000041_SNP [dm6]	T	A	2.523e^-4	0.613	INTRON dpr13
3L	5858679	3L_5858679_SNP [dm3] 3L_5865579_SNP [dm6]	G	A	2.523e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	19950566	2R_19950566_SNP [dm3] 2R_24063043_SNP [dm6]	A	G	2.524e^-4	0.613	UPSTREAM Rap2l & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19950598	2R_19950598_SNP [dm3] 2R_24063075_SNP [dm6]	G	A	2.524e^-4	0.613	UTR_5_PRIME Rap2l UPSTREAM RpL39	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10782231	3R_10782231_SNP [dm3] 3R_14956509_SNP [dm6]	C	G	2.530e^-4	0.613	INTERGENIC
X	14862115	X_14862115_SNP [dm3] X_14968082_SNP [dm6]	A	T	2.531e^-4	0.613	INTRON eag
3L	5262905	3L_5262905_SNP [dm3] 3L_5269805_SNP [dm6]	T	A	2.531e^-4	0.613	INTRON shep
2R	13084905	2R_13084905_SNP [dm3] 2R_17197400_SNP [dm6]	C	A	2.549e^-4	0.613	DOWNSTREAM CG10950 INTERGENIC
X	5605827	X_5605827_SNP [dm3] X_5711794_SNP [dm6]	A	G	2.571e^-4	0.613	SYNONYMOUS_CODING CG33080 UTR_5_PRIME CG33080
3L	5717788	3L_5717788_SNP [dm3] 3L_5724688_SNP [dm6]	G	A	2.572e^-4	0.613	INTRON sif
2R	16282553	2R_16282553_SNP [dm3] 2R_20395048_SNP [dm6]	A	G	2.578e^-4	0.613	INTERGENIC
2R	13887528	2R_13887528_SNP [dm3] 2R_18000023_SNP [dm6]	C	T	2.578e^-4	0.613	INTRON dpr13
3L	16665602	3L_16665602_SNP [dm3] 3L_16672502_SNP [dm6]	A	G	2.581e^-4	0.613	SYNONYMOUS_CODING zetaCOP
2R	19950518	2R_19950518_SNP [dm3] 2R_24062995_SNP [dm6]	T	A	2.588e^-4	0.613	UPSTREAM Rap2l & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13389301	3L_13389301_INS [dm3] 3L_13396201_INS [dm6]	T	TGGAGTTT	2.591e^-4	0.613	DOWNSTREAM sens INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	8961447	X_8961447_SNP [dm3] X_9067414_SNP [dm6]	T	A	2.592e^-4	0.613	INTRON CG15365
3L	14136322	3L_14136322_SNP [dm3] 3L_14143222_SNP [dm6]	T	A	2.596e^-4	0.613	INTERGENIC	regulatory region REDfly_CRMs
3R	25150185	3R_25150185_SNP [dm3] 3R_29324463_SNP [dm6]	T	A	2.599e^-4	0.613	INTERGENIC
2L	17528572	2L_17528572_SNP [dm3] 2L_17528572_SNP [dm6]	A	T	2.599e^-4	0.613	SYNONYMOUS_CODING CG15144 DOWNSTREAM CG15145
3R	14336285	3R_14336285_SNP [dm3] 3R_18510563_SNP [dm6]	C	G	2.600e^-4	0.613	INTRON fru
3L	1216035	3L_1216035_SNP [dm3] 3L_1216035_SNP [dm6]	A	G	2.600e^-4	0.613	INTRON mwh	TF binding site BDTNP1_TFBS_prd mE1_TFBS_inv
3R	6270867	3R_6270867_SNP [dm3] 3R_10445145_SNP [dm6]	A	T	2.602e^-4	0.613	INTERGENIC
2R	17235189	2R_17235189_SNP [dm3] 2R_21347684_SNP [dm6]	T	A	2.605e^-4	0.613	INTRON CG9822
2L	13820357	2L_13820357_SNP [dm3] 2L_13820357_SNP [dm6]	C	T	2.608e^-4	0.613	UPSTREAM b DOWNSTREAM Sos INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
3L	5324175	3L_5324175_SNP [dm3] 3L_5331075_SNP [dm6]	C	G	2.611e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	6160688	2L_6160688_SNP [dm3] 2L_6160688_SNP [dm6]	A	C	2.612e^-4	0.613	NON_SYNONYMOUS_CODING CG13989	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
2L	18021443	2L_18021443_SNP [dm3] 2L_18021443_SNP [dm6]	A	C	2.613e^-4	0.613	INTRON rdo
3L	13368285	3L_13368285_SNP [dm3] 3L_13375185_SNP [dm6]	C	T	2.617e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	15149432	X_15149432_SNP [dm3] X_15255399_SNP [dm6]	C	T	2.628e^-4	0.613	INTERGENIC
X	16220298	X_16220298_SNP [dm3] X_16326265_SNP [dm6]	C	T	2.631e^-4	0.613	NON_SYNONYMOUS_CODING CalpC DOWNSTREAM CG32579	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_inv mE1_TFBS_sens
2R	3772050	2R_3772050_SNP [dm3] 2R_7884545_SNP [dm6]	G	A	2.640e^-4	0.613	INTRON Dgk
3L	11924188	3L_11924188_SNP [dm3] 3L_11931088_SNP [dm6]	T	C	2.640e^-4	0.613	INTRON CG44837 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	8392633	2L_8392633_SNP [dm3] 2L_8392633_SNP [dm6]	G	A	2.645e^-4	0.613	SYNONYMOUS_CODING Acp29AB UPSTREAM CG42820 DOWNSTREAM lectin-29Ca	TF binding site mE1_TFBS_D mE1_TFBS_HSA
2L	9936346	2L_9936346_SNP [dm3] 2L_9936346_SNP [dm6]	A	G	2.647e^-4	0.613	UTR_3_PRIME CG31712 UPSTREAM CR45007 INTRON CG31712
3R	12429381	3R_12429381_SNP [dm3] 3R_16603659_SNP [dm6]	G	C	2.647e^-4	0.613	INTRON CG10345
2R	12160966	2R_12160966_SNP [dm3] 2R_16273461_SNP [dm6]	T	C	2.649e^-4	0.613	NON_SYNONYMOUS_CODING CG33017	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	6563003	2L_6563003_SNP [dm3] 2L_6563003_SNP [dm6]	C	A	2.649e^-4	0.613	NON_SYNONYMOUS_CODING Ent2 UPSTREAM CG9596	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_sens
3L	16861192	3L_16861192_SNP [dm3] 3L_16868092_SNP [dm6]	G	A	2.653e^-4	0.613	INTRON Lmpt
3R	27000736	3R_27000736_SNP [dm3] 3R_31175014_SNP [dm6]	A	G	2.657e^-4	0.613	INTRON Gycbeta100B
2L	17072248	2L_17072248_SNP [dm3] 2L_17072248_SNP [dm6]	A	G	2.658e^-4	0.613	INTERGENIC
X	5700434	X_5700434_SNP [dm3] X_5806401_SNP [dm6]	G	T	2.660e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12994349	2L_12994349_SNP [dm3] 2L_12994349_SNP [dm6]	C	T	2.679e^-4	0.613	INTRON CG12404
3L	13770891	3L_13770891_SNP [dm3] 3L_13777791_SNP [dm6]	A	T	2.685e^-4	0.613	INTRON bru-3
2R	16388101	2R_16388101_SNP [dm3] 2R_20500596_SNP [dm6]	C	G	2.687e^-4	0.613	INTERGENIC
3R	5583494	3R_5583494_SNP [dm3] 3R_9757772_SNP [dm6]	T	C	2.696e^-4	0.613	SYNONYMOUS_CODING CG8412	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5765073	2L_5765073_SNP [dm3] 2L_5765073_SNP [dm6]	A	C	2.697e^-4	0.613	INTRON obst-E
3R	1701529	3R_1701529_SNP [dm3] 3R_5875807_SNP [dm6]	T	A	2.708e^-4	0.613	INTRON CG34113
2R	11929665	2R_11929665_SNP [dm3] 2R_16042160_SNP [dm6]	G	C	2.709e^-4	0.613	SYNONYMOUS_CODING SP2353	TF binding site mE1_TFBS_chinmo
2L	2249820	2L_2249820_SNP [dm3] 2L_2249820_SNP [dm6]	C	T	2.710e^-4	0.613	DOWNSTREAM Ser12 INTERGENIC
3L	8542038	3L_8542038_SNP [dm3] 3L_8548938_SNP [dm6]	A	C	2.715e^-4	0.613	INTRON rhea	TF binding site BDTNP1_TFBS_twi
2R	16961937	2R_16961937_SNP [dm3] 2R_21074432_SNP [dm6]	G	A	2.728e^-4	0.613	INTRON Treh
3L	16521623	3L_16521623_SNP [dm3] 3L_16528523_SNP [dm6]	C	G	2.734e^-4	0.613	INTRON CG43373
2L	12361730	2L_12361730_SNP [dm3] 2L_12361730_SNP [dm6]	A	T	2.735e^-4	0.613	INTRON bru-2
2L	16762743	2L_16762743_DEL [dm3] 2L_16762743_DEL [dm6]	CGCCTAAGCTTT...	C	2.739e^-4	0.613	INTERGENIC
3R	8423178	3R_8423178_SNP [dm3] 3R_12597456_SNP [dm6]	G	A	2.745e^-4	0.613	INTERGENIC
2L	7665612	2L_7665612_SNP [dm3] 2L_7665612_SNP [dm6]	G	A	2.748e^-4	0.613	UPSTREAM Myo28B1 INTRON Slob
3R	13270076	3R_13270076_SNP [dm3] 3R_17444354_SNP [dm6]	T	C	2.749e^-4	0.613	SYNONYMOUS_CODING CG5873
3R	25169533	3R_25169533_SNP [dm3] 3R_29343811_SNP [dm6]	T	G	2.749e^-4	0.613	INTERGENIC
3R	6351003	3R_6351003_SNP [dm3] 3R_10525281_SNP [dm6]	T	C	2.750e^-4	0.613	INTRON hth
3L	9462385	3L_9462385_SNP [dm3] 3L_9469285_SNP [dm6]	T	C	2.752e^-4	0.613	INTRON CG44838	TF binding site BDTNP1_TFBS_dl
X	17875038	X_17875038_MNP [dm3] X_17981005_MNP [dm6]	AGG	TAT	2.752e^-4	0.613	INTRON Sh
X	1161448	X_1161448_SNP [dm3] X_1267415_SNP [dm6]	G	A	2.754e^-4	0.613	INTRON Atf3
2L	765907	2L_765907_SNP [dm3] 2L_765907_SNP [dm6]	C	T	2.758e^-4	0.613	INTERGENIC
2L	8269102	2L_8269102_SNP [dm3] 2L_8269102_SNP [dm6]	G	A	2.761e^-4	0.613	INTRON Btk29A
2L	11886189	2L_11886189_SNP [dm3] 2L_11886189_SNP [dm6]	T	C	2.761e^-4	0.613	INTRON Pde1c
2L	2394988	2L_2394988_SNP [dm3] 2L_2394988_SNP [dm6]	G	T	2.770e^-4	0.613	INTRON VGlut
2L	10136121	2L_10136121_SNP [dm3] 2L_10136121_SNP [dm6]	G	A	2.771e^-4	0.613	INTRON CG44153
3R	15153132	3R_15153132_SNP [dm3] 3R_19327410_SNP [dm6]	C	T	2.774e^-4	0.613	UPSTREAM mir-997 INTRON CR44175
2L	15502091	2L_15502091_SNP [dm3] 2L_15502091_SNP [dm6]	A	G	2.775e^-4	0.613	INTRON lace
2L	12570438	2L_12570438_SNP [dm3] 2L_12570438_SNP [dm6]	T	G	2.777e^-4	0.613	DOWNSTREAM CR44598 & 1 other INTERGENIC
X	19250525	X_19250525_SNP [dm3] X_19356492_SNP [dm6]	A	T	2.777e^-4	0.613	INTRON kek5
2L	21724219	2L_21724219_SNP [dm3] 2L_21724219_SNP [dm6]	G	A	2.778e^-4	0.613	INTRON CG31619
3R	15339511	3R_15339511_SNP [dm3] 3R_19513789_SNP [dm6]	T	A	2.780e^-4	0.613	INTRON Dys
2R	10286867	2R_10286867_SNP [dm3] 2R_14399362_SNP [dm6]	C	A	2.782e^-4	0.613	INTERGENIC
2L	2171282	2L_2171282_SNP [dm3] 2L_2171282_SNP [dm6]	T	C	2.786e^-4	0.613	INTRON aop	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
2L	7675078	2L_7675078_SNP [dm3] 2L_7675078_SNP [dm6]	G	A	2.788e^-4	0.613	UTR_5_PRIME Slob INTRON Myo28B1
2L	4164028	2L_4164028_SNP [dm3] 2L_4164028_SNP [dm6]	A	C	2.789e^-4	0.613	DOWNSTREAM Or24a INTERGENIC
2R	1950194	2R_1950194_SNP [dm3] 2R_6062689_SNP [dm6]	G	C	2.796e^-4	0.613	UTR_5_PRIME CCHa2-R
2R	19950431	2R_19950431_SNP [dm3] 2R_24062908_SNP [dm6]	G	C	2.796e^-4	0.613	UPSTREAM Rap2l & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	25334765	3R_25334765_SNP [dm3] 3R_29509043_SNP [dm6]	G	A	2.799e^-4	0.613	INTERGENIC
3L	7064605	3L_7064605_SNP [dm3] 3L_7071505_SNP [dm6]	C	A	2.808e^-4	0.613	INTRON CG8641
2L	12176185	2L_12176185_SNP [dm3] 2L_12176185_SNP [dm6]	C	G	2.813e^-4	0.613	INTRON aret & 1 other
2R	9830046	2R_9830046_SNP [dm3] 2R_13942541_SNP [dm6]	C	T	2.815e^-4	0.613	UTR_3_PRIME DJ-1alpha UPSTREAM shot DOWNSTREAM AGO1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_kn mE1_TFBS_ttk mE1_TFBS_zfh1
3R	14392960	3R_14392960_SNP [dm3] 3R_18567238_SNP [dm6]	G	C	2.818e^-4	0.613	INTERGENIC
3L	1917816	3L_1917816_SNP [dm3] 3L_1917816_SNP [dm6]	C	G	2.821e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	16961872	2R_16961872_SNP [dm3] 2R_21074367_SNP [dm6]	T	C	2.822e^-4	0.613	INTRON Treh
2L	12570471	2L_12570471_DEL [dm3] 2L_12570471_DEL [dm6]	CATATAAGC	C	2.822e^-4	0.613	DOWNSTREAM CR44598 & 1 other INTERGENIC
2R	12241717	2R_12241717_DEL [dm3] 2R_16354212_DEL [dm6]	ACAC	TTT	2.825e^-4	0.613	DOWNSTREAM CG30098 INTERGENIC
2L	2337416	2L_2337416_SNP [dm3] 2L_2337416_SNP [dm6]	T	C	2.833e^-4	0.613	INTRON CG9967 & 1 other
2L	849420	2L_849420_SNP [dm3] 2L_849420_SNP [dm6]	G	T	2.841e^-4	0.613	INTRON drongo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_sens
3L	16224889	3L_16224889_SNP [dm3] 3L_16231789_SNP [dm6]	A	G	2.841e^-4	0.613	UPSTREAM MED10 DOWNSTREAM CG5027 INTRON PDCD-5	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3L	18150991	3L_18150991_SNP [dm3] 3L_18157891_SNP [dm6]	C	G	2.842e^-4	0.613	INTRON CG13699	TF binding site mE1_TFBS_HSA
3L	14172597	3L_14172597_SNP [dm3] 3L_14179497_SNP [dm6]	C	T	2.843e^-4	0.613	UPSTREAM D INTERGENIC	regulatory region REDfly_CRMs
3L	939189	3L_939189_SNP [dm3] 3L_939189_SNP [dm6]	A	G	2.848e^-4	0.613	INTRON Glut1
3L	5590574	3L_5590574_SNP [dm3] 3L_5597474_SNP [dm6]	G	A	2.850e^-4	0.613	DOWNSTREAM CG5150 INTERGENIC
2L	12994421	2L_12994421_SNP [dm3] 2L_12994421_SNP [dm6]	G	T	2.851e^-4	0.613	INTRON CG12404
2R	16487275	2R_16487275_SNP [dm3] 2R_20599770_SNP [dm6]	C	G	2.855e^-4	0.613	INTRON bl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	8229308	2L_8229308_SNP [dm3] 2L_8229308_SNP [dm6]	G	C	2.855e^-4	0.613	INTRON Pvr
2R	16736491	2R_16736491_SNP [dm3] 2R_20848986_SNP [dm6]	G	A	2.856e^-4	0.613	INTRON CG17999
X	15796192	X_15796192_SNP [dm3] X_15902159_SNP [dm6]	G	A	2.858e^-4	0.613	INTRON shi
3L	6780615	3L_6780615_SNP [dm3] 3L_6787515_SNP [dm6]	T	C	2.858e^-4	0.613	UPSTREAM CR45759 INTERGENIC
2L	3889724	2L_3889724_SNP [dm3] 2L_3889724_SNP [dm6]	T	C	2.861e^-4	0.613	NON_SYNONYMOUS_CODING capu UTR_5_PRIME capu UPSTREAM capu INTRON capu	TF binding site mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_kn mE1_TFBS_ttk
3L	11333126	3L_11333126_SNP [dm3] 3L_11340026_SNP [dm6]	T	G	2.863e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
X	4682662	X_4682662_SNP [dm3] X_4788629_SNP [dm6]	G	C	2.868e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
3R	10263553	3R_10263553_SNP [dm3] 3R_14437831_SNP [dm6]	C	T	2.871e^-4	0.613	INTRON cv-c
2L	12274055	2L_12274055_SNP [dm3] 2L_12274055_SNP [dm6]	T	G	2.871e^-4	0.613	INTRON aret
3L	13349033	3L_13349033_SNP [dm3] 3L_13355933_SNP [dm6]	C	G	2.874e^-4	0.613	UPSTREAM Nplp2 DOWNSTREAM CG17687 INTERGENIC	TF binding site mE1_TFBS_kn mE1_TFBS_zfh1
X	7206929	X_7206929_SNP [dm3] X_7312896_SNP [dm6]	A	T	2.877e^-4	0.613	INTRON CR44357 & 1 other
2L	17781428	2L_17781428_SNP [dm3] 2L_17781428_SNP [dm6]	A	G	2.878e^-4	0.613	INTERGENIC
2R	16192419	2R_16192419_SNP [dm3] 2R_20304914_SNP [dm6]	C	G	2.880e^-4	0.613	SYNONYMOUS_CODING CG11200
2L	12195422	2L_12195422_SNP [dm3] 2L_12195422_SNP [dm6]	A	G	2.883e^-4	0.613	INTRON aret
2L	18093088	2L_18093088_SNP [dm3] 2L_18093088_SNP [dm6]	G	C	2.885e^-4	0.613	UPSTREAM CG15153 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	18165137	2R_18165137_SNP [dm3] 2R_22277632_SNP [dm6]	A	G	2.890e^-4	0.613	INTRON dve	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17764057	2R_17764057_SNP [dm3] 2R_21876552_SNP [dm6]	C	T	2.896e^-4	0.613	INTRON Fili	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	5407620	3L_5407620_SNP [dm3] 3L_5414520_SNP [dm6]	C	T	2.903e^-4	0.613	INTERGENIC
2L	6830544	2L_6830544_SNP [dm3] 2L_6830544_SNP [dm6]	T	G	2.903e^-4	0.613	INTRON sens-2	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
3L	18215120	3L_18215120_SNP [dm3] 3L_18222020_SNP [dm6]	A	G	2.905e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	2099536	X_2099536_SNP [dm3] X_2205503_SNP [dm6]	A	G	2.907e^-4	0.613	DOWNSTREAM msta & 1 other INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	16522090	3R_16522090_INS [dm3] 3R_20696368_INS [dm6]	G	GAGAGAAAAG	2.908e^-4	0.613	INTRON Oamb
2R	20188166	2R_20188166_SNP [dm3] 2R_24300643_SNP [dm6]	G	A	2.909e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	13368151	3L_13368151_SNP [dm3] 3L_13375051_SNP [dm6]	A	G	2.910e^-4	0.613	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	12863760	2R_12863760_SNP [dm3] 2R_16976255_SNP [dm6]	C	A	2.910e^-4	0.613	INTRON Cbp53E
X	18223216	X_18223216_SNP [dm3] X_18329183_SNP [dm6]	C	T	2.910e^-4	0.613	SYNONYMOUS_CODING CG6123
3L	13389432	3L_13389432_SNP [dm3] 3L_13396332_SNP [dm6]	C	T	2.915e^-4	0.613	UTR_3_PRIME sens
3L	14024920	3L_14024920_INS [dm3] 3L_14031820_INS [dm6]	A	AA	2.916e^-4	0.613	UTR_5_PRIME CG6650 UPSTREAM CG6650 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
3L	17055114	3L_17055114_INS [dm3] 3L_17062014_INS [dm6]	T	TA	2.922e^-4	0.613	UTR_3_PRIME Rbp6
3L	11924175	3L_11924175_DEL [dm3] 3L_11931075_DEL [dm6]	TT	T	2.923e^-4	0.613	INTRON CG44837 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	17521224	2L_17521224_SNP [dm3] 2L_17521224_SNP [dm6]	T	A	2.929e^-4	0.613	NON_SYNONYMOUS_CODING CG15143 INTRON Dhc36C
2R	17980433	2R_17980433_SNP [dm3] 2R_22092928_SNP [dm6]	T	G	2.929e^-4	0.613	NON_SYNONYMOUS_CODING CG11073 INTRON CG11073	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	22156249	2L_22156249_SNP [dm3] 2L_22156249_SNP [dm6]	G	A	2.931e^-4	0.613	INTRON CG42748	transposable element FlyBase
2R	6495982	2R_6495982_INS [dm3] 2R_10608477_INS [dm6]	A	ACCCA	2.941e^-4	0.613	INTRON psq
3R	19573365	3R_19573365_SNP [dm3] 3R_23747643_SNP [dm6]	C	T	2.942e^-4	0.613	INTRON Hmgcr	TF binding site mE1_TFBS_chinmo
X	5253961	X_5253961_SNP [dm3] X_5359928_SNP [dm6]	C	T	2.943e^-4	0.613	INTRON SK
2L	6830424	2L_6830424_SNP [dm3] 2L_6830424_SNP [dm6]	C	T	2.947e^-4	0.613	INTRON sens-2	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2R	16736714	2R_16736714_SNP [dm3] 2R_20849209_SNP [dm6]	G	A	2.948e^-4	0.613	SYNONYMOUS_CODING CG17999 DOWNSTREAM CG9993
2R	16487284	2R_16487284_SNP [dm3] 2R_20599779_SNP [dm6]	T	C	2.950e^-4	0.613	INTRON bl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13548117	3L_13548117_SNP [dm3] 3L_13555017_SNP [dm6]	G	T	2.957e^-4	0.613	INTRON bru-3
3R	10263626	3R_10263626_SNP [dm3] 3R_14437904_SNP [dm6]	A	T	2.962e^-4	0.613	INTRON cv-c
2R	8849481	2R_8849481_SNP [dm3] 2R_12961976_SNP [dm6]	A	T	2.964e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_D mE1_TFBS_HSA
3R	6250403	3R_6250403_DEL [dm3] 3R_10424681_DEL [dm6]	AAA	GG	2.965e^-4	0.613	INTERGENIC
X	5700447	X_5700447_SNP [dm3] X_5806414_SNP [dm6]	A	T	2.966e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9113279	3L_9113279_SNP [dm3] 3L_9120179_SNP [dm6]	C	A	2.972e^-4	0.613	INTRON bol
3L	13784332	3L_13784332_SNP [dm3] 3L_13791232_SNP [dm6]	G	C	2.973e^-4	0.613	INTRON bru-3
2L	630342	2L_630342_SNP [dm3] 2L_630342_SNP [dm6]	G	A	2.977e^-4	0.613	INTERGENIC
2L	12305496	2L_12305496_SNP [dm3] 2L_12305496_SNP [dm6]	A	C	2.982e^-4	0.613	INTRON aret
X	2576192	X_2576192_SNP [dm3] X_2682159_SNP [dm6]	C	G	2.986e^-4	0.613	NON_SYNONYMOUS_CODING CG2652 UPSTREAM HLH3B DOWNSTREAM CR44470	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_slp1 mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12673806	2L_12673806_INS [dm3] 2L_12673806_INS [dm6]	A	AGTTAACAATTATCGCCATT...	2.993e^-4	0.613	INTRON pdm2
3R	8381991	3R_8381991_SNP [dm3] 3R_12556269_SNP [dm6]	C	T	2.994e^-4	0.613	INTRON Octbeta2R
2L	12047018	2L_12047018_SNP [dm3] 2L_12047018_SNP [dm6]	T	G	3.015e^-4	0.613	UTR_3_PRIME Plzf UPSTREAM CG6770 DOWNSTREAM CR44589
3L	4717901	3L_4717901_SNP [dm3] 3L_4717901_SNP [dm6]	T	G	3.016e^-4	0.613	INTRON RhoGEF64C
2L	2015939	2L_2015939_SNP [dm3] 2L_2015939_SNP [dm6]	A	T	3.024e^-4	0.613	INTRON CG4238
3R	11300110	3R_11300110_SNP [dm3] 3R_15474388_SNP [dm6]	C	T	3.026e^-4	0.613	INTRON AdamTS-A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	16616982	3R_16616982_SNP [dm3] 3R_20791260_SNP [dm6]	T	A	3.027e^-4	0.613	INTRON Syp	TF binding site BDTNP1_TFBS_twi
2L	16428585	2L_16428585_INS [dm3] 2L_16428585_INS [dm6]	A	TG	3.029e^-4	0.613	INTRON CG5888
3R	13866432	3R_13866432_SNP [dm3] 3R_18040710_SNP [dm6]	A	G	3.030e^-4	0.613	INTERGENIC
X	20030848	X_20030848_DEL [dm3] X_20136815_DEL [dm6]	AACAACC	A	3.030e^-4	0.613		TF binding site mE1_TFBS_chinmo
3L	9712830	3L_9712830_SNP [dm3] 3L_9719730_SNP [dm6]	A	G	3.030e^-4	0.613	SYNONYMOUS_CODING CG14174 UPSTREAM CG18178 DOWNSTREAM nbs	TF binding site mE1_TFBS_sens
3L	7064156	3L_7064156_SNP [dm3] 3L_7071056_SNP [dm6]	A	G	3.039e^-4	0.613	INTRON CG8641
3R	18185038	3R_18185038_SNP [dm3] 3R_22359316_SNP [dm6]	T	C	3.042e^-4	0.613	INTRON Sar1
2L	12570466	2L_12570466_MNP [dm3] 2L_12570466_MNP [dm6]	CCT	TTC	3.042e^-4	0.613	DOWNSTREAM CR44598 & 1 other INTERGENIC
2R	13615812	2R_13615812_SNP [dm3] 2R_17728307_SNP [dm6]	T	C	3.045e^-4	0.613	STOP_LOST CG4975 UTR_5_PRIME CG4984 UPSTREAM CG4984
3L	9875006	3L_9875006_SNP [dm3] 3L_9881906_SNP [dm6]	A	C	3.050e^-4	0.613	INTRON CG34382
2L	2339635	2L_2339635_SNP [dm3] 2L_2339635_SNP [dm6]	A	G	3.051e^-4	0.613	NON_SYNONYMOUS_CODING eys INTRON CG9967
2L	2339638	2L_2339638_SNP [dm3] 2L_2339638_SNP [dm6]	C	T	3.051e^-4	0.613	NON_SYNONYMOUS_CODING eys INTRON CG9967
3R	16571382	3R_16571382_SNP [dm3] 3R_20745660_SNP [dm6]	A	T	3.056e^-4	0.613	UPSTREAM CG31200 INTRON CG42322
2R	6254708	2R_6254708_SNP [dm3] 2R_10367203_SNP [dm6]	T	C	3.056e^-4	0.613	INTRON CG42732
3R	8416003	3R_8416003_SNP [dm3] 3R_12590281_SNP [dm6]	G	A	3.056e^-4	0.613	INTRON Octbeta2R
3R	8425752	3R_8425752_SNP [dm3] 3R_12600030_SNP [dm6]	C	A	3.056e^-4	0.613	INTERGENIC
3R	8426517	3R_8426517_SNP [dm3] 3R_12600795_SNP [dm6]	C	T	3.056e^-4	0.613	INTERGENIC
3R	8427469	3R_8427469_SNP [dm3] 3R_12601747_SNP [dm6]	A	C	3.056e^-4	0.613	INTERGENIC
3R	9892835	3R_9892835_SNP [dm3] 3R_14067113_SNP [dm6]	C	T	3.059e^-4	0.613	SYNONYMOUS_CODING foxo
3L	7064002	3L_7064002_SNP [dm3] 3L_7070902_SNP [dm6]	T	C	3.061e^-4	0.613	INTRON CG8641
3R	14304559	3R_14304559_SNP [dm3] 3R_18478837_SNP [dm6]	C	A	3.062e^-4	0.613	INTRON fru
3L	6662975	3L_6662975_SNP [dm3] 3L_6669875_SNP [dm6]	C	A	3.072e^-4	0.613	INTERGENIC
3R	7161595	3R_7161595_SNP [dm3] 3R_11335873_SNP [dm6]	T	C	3.077e^-4	0.613	INTRON pros	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	2733021	2R_2733021_SNP [dm3] 2R_6845516_SNP [dm6]	T	C	3.078e^-4	0.613	INTERGENIC
3R	6912461	3R_6912461_SNP [dm3] 3R_11086739_SNP [dm6]	C	G	3.079e^-4	0.613	INTERGENIC
2R	15032781	2R_15032781_SNP [dm3] 2R_19145276_SNP [dm6]	T	C	3.081e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
3L	13784385	3L_13784385_SNP [dm3] 3L_13791285_SNP [dm6]	G	C	3.085e^-4	0.613	INTRON bru-3
2R	16355588	2R_16355588_SNP [dm3] 2R_20468083_SNP [dm6]	T	C	3.087e^-4	0.613	INTRON CG12484
3R	8237542	3R_8237542_SNP [dm3] 3R_12411820_SNP [dm6]	A	G	3.095e^-4	0.613	UTR_3_PRIME Dip-C DOWNSTREAM CG5196	TF binding site mE1_TFBS_cad
X	9507717	X_9507717_SNP [dm3] X_9613684_SNP [dm6]	T	G	3.102e^-4	0.613	INTRON CG42797
3L	5725898	3L_5725898_SNP [dm3] 3L_5732798_SNP [dm6]	G	A	3.103e^-4	0.613	INTRON sif
3L	4689498	3L_4689498_SNP [dm3] 3L_4689498_SNP [dm6]	C	T	3.103e^-4	0.613	SYNONYMOUS_CODING CG18418 UPSTREAM CG7514	TF binding site mE1_TFBS_HSA
2R	7636031	2R_7636031_INS [dm3] 2R_11748526_INS [dm6]	C	TTT	3.114e^-4	0.613	INTERGENIC
2R	10422286	2R_10422286_SNP [dm3] 2R_14534781_SNP [dm6]	A	T	3.117e^-4	0.613	INTRON ttv
2R	13145434	2R_13145434_SNP [dm3] 2R_17257929_SNP [dm6]	C	T	3.118e^-4	0.613	UPSTREAM CG43108 INTRON mbl
X	14540385	X_14540385_SNP [dm3] X_14646352_SNP [dm6]	G	C	3.119e^-4	0.613	INTRON NetA	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	18165161	2R_18165161_SNP [dm3] 2R_22277656_SNP [dm6]	G	A	3.121e^-4	0.613	INTRON dve	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	18833967	X_18833967_SNP [dm3] X_18939934_SNP [dm6]	T	A	3.122e^-4	0.613	INTRON CG43759	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
X	11040888	X_11040888_INS [dm3] X_11146855_INS [dm6]	A	AAATGTCA	3.123e^-4	0.613	UPSTREAM Ran INTRON Ran	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2L	2016210	2L_2016210_SNP [dm3] 2L_2016210_SNP [dm6]	T	C	3.127e^-4	0.613	INTRON CG4238
X	22001547	X_22001547_SNP [dm3] X_22599711_SNP [dm6]	G	T	3.131e^-4	0.613	INTRON Cda4
3R	14647332	3R_14647332_SNP [dm3] 3R_18821610_SNP [dm6]	A	G	3.131e^-4	0.613	INTRON CG18208
2L	16569867	2L_16569867_SNP [dm3] 2L_16569867_SNP [dm6]	G	T	3.139e^-4	0.613	INTRON CG42389
3R	8206661	3R_8206661_SNP [dm3] 3R_12380939_SNP [dm6]	C	T	3.139e^-4	0.613	UTR_3_PRIME CG10035 DOWNSTREAM CG10035 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
2L	2337165	2L_2337165_SNP [dm3] 2L_2337165_SNP [dm6]	T	G	3.149e^-4	0.613	INTRON CG9967 & 1 other
3L	13377120	3L_13377120_DEL [dm3] 3L_13384020_DEL [dm6]	TT	T	3.152e^-4	0.613	UPSTREAM CG14110 DOWNSTREAM ImpL1 INTERGENIC
2L	2251300	2L_2251300_SNP [dm3] 2L_2251300_SNP [dm6]	T	A	3.156e^-4	0.613	UPSTREAM Ser12 DOWNSTREAM CG17239 INTERGENIC
3L	16931111	3L_16931111_SNP [dm3] 3L_16938011_SNP [dm6]	C	A	3.157e^-4	0.613	DOWNSTREAM CG13022 INTERGENIC
2R	17741209	2R_17741209_SNP [dm3] 2R_21853704_SNP [dm6]	G	A	3.160e^-4	0.613	INTERGENIC	TF binding site mE1_TFBS_cad
3L	5154769	3L_5154769_SNP [dm3] 3L_5161669_SNP [dm6]	G	A	3.163e^-4	0.613	INTRON shep
X	8163031	X_8163031_SNP [dm3] X_8268998_SNP [dm6]	G	A	3.166e^-4	0.613	SYNONYMOUS_CODING CG1632 DOWNSTREAM Corp	TF binding site mE1_TFBS_chinmo
2R	12088792	2R_12088792_SNP [dm3] 2R_16201287_SNP [dm6]	A	G	3.171e^-4	0.613	SYNONYMOUS_CODING shark	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	12379076	3R_12379076_SNP [dm3] 3R_16553354_SNP [dm6]	A	G	3.172e^-4	0.613	INTRON CG42342	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1
3L	12072739	3L_12072739_SNP [dm3] 3L_12079639_SNP [dm6]	T	C	3.174e^-4	0.613	INTRON Sema-5c	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	11667479	2L_11667479_SNP [dm3] 2L_11667479_SNP [dm6]	T	G	3.179e^-4	0.613	INTERGENIC
3L	12924284	3L_12924284_SNP [dm3] 3L_12931184_SNP [dm6]	T	A	3.182e^-4	0.613	INTERGENIC
3R	8411355	3R_8411355_SNP [dm3] 3R_12585633_SNP [dm6]	T	A	3.190e^-4	0.613	INTRON Octbeta2R
X	6678612	X_6678612_SNP [dm3] X_6784579_SNP [dm6]	G	A	3.196e^-4	0.613	INTRON C3G
2R	18957314	2R_18957314_SNP [dm3] 2R_23069791_SNP [dm6]	A	T	3.197e^-4	0.613	UPSTREAM l_2_k09913 INTRON l_2_k09913	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	16420363	2L_16420363_SNP [dm3] 2L_16420363_SNP [dm6]	G	T	3.202e^-4	0.613	INTRON CG5888
2L	16762729	2L_16762729_INS [dm3] 2L_16762729_INS [dm6]	G	TA	3.203e^-4	0.613	INTERGENIC
3L	18328457	3L_18328457_SNP [dm3] 3L_18335357_SNP [dm6]	G	T	3.204e^-4	0.613	INTERGENIC
2L	16428590	2L_16428590_INS [dm3] 2L_16428590_INS [dm6]	C	TATGTA	3.210e^-4	0.613	INTRON CG5888
2R	3080267	2R_3080267_SNP [dm3] 2R_7192762_SNP [dm6]	G	T	3.215e^-4	0.613	UTR_5_PRIME pk INTRON pk	TF binding site BDTNP1_TFBS_prd
3L	12026442	3L_12026442_SNP [dm3] 3L_12033342_SNP [dm6]	G	A	3.226e^-4	0.613	DOWNSTREAM CG43993 INTRON rols
2L	9141210	2L_9141210_SNP [dm3] 2L_9141210_SNP [dm6]	T	A	3.233e^-4	0.613	INTRON CG32982
2R	14739312	2R_14739312_SNP [dm3] 2R_18851807_SNP [dm6]	C	G	3.233e^-4	0.613	NON_SYNONYMOUS_CODING CG15084 DOWNSTREAM CG18190	TF binding site mE1_TFBS_chinmo
3L	5717698	3L_5717698_DEL [dm3] 3L_5724598_DEL [dm6]	AA	A	3.233e^-4	0.613	INTRON sif
3L	4737892	3L_4737892_SNP [dm3] 3L_4737892_SNP [dm6]	T	C	3.234e^-4	0.613	INTRON RhoGEF64C
2R	19518278	2R_19518278_SNP [dm3] 2R_23630755_SNP [dm6]	A	G	3.236e^-4	0.613	INTERGENIC
2R	13084864	2R_13084864_SNP [dm3] 2R_17197359_SNP [dm6]	C	T	3.237e^-4	0.613	DOWNSTREAM CG10950 INTERGENIC
2R	15032827	2R_15032827_SNP [dm3] 2R_19145322_SNP [dm6]	T	C	3.237e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
2R	15032829	2R_15032829_SNP [dm3] 2R_19145324_SNP [dm6]	T	C	3.237e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
2R	15032833	2R_15032833_SNP [dm3] 2R_19145328_SNP [dm6]	A	G	3.237e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
2R	15032834	2R_15032834_SNP [dm3] 2R_19145329_SNP [dm6]	A	G	3.237e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
2R	15032836	2R_15032836_SNP [dm3] 2R_19145331_SNP [dm6]	T	A	3.237e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
2R	15032837	2R_15032837_DEL [dm3] 2R_19145332_DEL [dm6]	ACGTTTTTGGATTT...	A	3.237e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
2R	15032853	2R_15032853_DEL [dm3] 2R_19145348_DEL [dm6]	GAA	G	3.237e^-4	0.613	INTRON ena EXON CR43399	TF binding site BDTNP1_TFBS_twi
3L	6513547	3L_6513547_SNP [dm3] 3L_6520447_SNP [dm6]	G	A	3.239e^-4	0.613	INTRON sfl
X	7239833	X_7239833_SNP [dm3] X_7345800_SNP [dm6]	G	A	3.243e^-4	0.613	DOWNSTREAM CG15034 INTRON CR44357 & 1 other
2L	7171542	2L_7171542_SNP [dm3] 2L_7171542_SNP [dm6]	G	A	3.248e^-4	0.613	INTERGENIC
2R	16736459	2R_16736459_SNP [dm3] 2R_20848954_SNP [dm6]	T	C	3.250e^-4	0.613	SYNONYMOUS_CODING CG17999
2R	18359879	2R_18359879_INS [dm3] 2R_22472374_INS [dm6]	A	AT	3.251e^-4	0.613	UTR_3_PRIME CG10384 DOWNSTREAM CG10384 & 1 other
3L	5154641	3L_5154641_SNP [dm3] 3L_5161541_SNP [dm6]	G	T	3.253e^-4	0.613	UTR_3_PRIME shep
3R	17681990	3R_17681990_SNP [dm3] 3R_21856268_SNP [dm6]	G	A	3.258e^-4	0.613	UPSTREAM glec INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl
2R	7651251	2R_7651251_SNP [dm3] 2R_11763746_SNP [dm6]	A	C	3.260e^-4	0.613	INTRON ths
2R	16709670	2R_16709670_SNP [dm3] 2R_20822165_SNP [dm6]	C	G	3.265e^-4	0.613	UTR_3_PRIME insc	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	8421207	3R_8421207_SNP [dm3] 3R_12595485_SNP [dm6]	C	T	3.270e^-4	0.613	UTR_5_PRIME Octbeta2R INTRON Octbeta2R	TF binding site BDTNP1_TFBS_z mE1_TFBS_chinmo mE1_TFBS_HSA
3L	4636269	3L_4636269_SNP [dm3] 3L_4636269_SNP [dm6]	C	T	3.273e^-4	0.613	DOWNSTREAM axo INTRON axo
3L	9874996	3L_9874996_SNP [dm3] 3L_9881896_SNP [dm6]	T	C	3.278e^-4	0.613	INTRON CG34382
2R	16287140	2R_16287140_SNP [dm3] 2R_20399635_SNP [dm6]	T	C	3.278e^-4	0.613	INTERGENIC
X	11418135	X_11418135_SNP [dm3] X_11524102_SNP [dm6]	G	A	3.280e^-4	0.613	INTRON Drak
3R	8470406	3R_8470406_SNP [dm3] 3R_12644684_SNP [dm6]	G	C	3.287e^-4	0.613	INTERGENIC
2L	1199421	2L_1199421_SNP [dm3] 2L_1199421_SNP [dm6]	T	C	3.290e^-4	0.613	UTR_5_PRIME CG43348 UPSTREAM CG43349 & 1 other
3L	6163831	3L_6163831_SNP [dm3] 3L_6170731_SNP [dm6]	T	C	3.301e^-4	0.613	SYNONYMOUS_CODING CG10289	TF binding site mE1_TFBS_cad mE1_TFBS_sens

By genomic position
Variant impact
Gene name

Locomot_Activity_SUC phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results