DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=6.968e^-1)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_2L_t	0.01350
In_3R_Mo	0.05433

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_2L_t	9.631	0.0081
In_3R_Mo	5.866	0.0532

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2553 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	15194446	3R_15194446_SNP [dm3] 3R_19368724_SNP [dm6]	T	C	9.889e^-7	0.492	DOWNSTREAM Ino80 INTERGENIC
X	4640757	X_4640757_SNP [dm3] X_4746724_SNP [dm6]	C	A	1.452e^-6	0.492	INTERGENIC
3R	15195261	3R_15195261_DEL [dm3] 3R_19369539_DEL [dm6]	TATGTATTTATGTAATTTTC...	T	1.822e^-6	0.492	INTRON Ino80
2L	3720977	2L_3720977_SNP [dm3] 2L_3720977_SNP [dm6]	T	G	2.207e^-6	0.492	UTR_5_PRIME Shaw UPSTREAM Shaw INTRON Shaw
3R	23180856	3R_23180856_SNP [dm3] 3R_27355134_SNP [dm6]	G	C	2.353e^-6	0.492	INTRON CG42534
2L	18253018	2L_18253018_SNP [dm3] 2L_18253018_SNP [dm6]	C	A	2.393e^-6	0.492	DOWNSTREAM CG43406 INTRON CG42750
3R	15195014	3R_15195014_SNP [dm3] 3R_19369292_SNP [dm6]	G	A	2.668e^-6	0.492	SYNONYMOUS_CODING Ino80
X	7423886	X_7423886_SNP [dm3] X_7529853_SNP [dm6]	A	G	2.773e^-6	0.492	INTRON CG32719
X	7425371	X_7425371_INS [dm3] X_7531338_INS [dm6]	A	AATCCCT	3.141e^-6	0.492	INTRON CG32719
2L	7707066	2L_7707066_INS [dm3] 2L_7707066_INS [dm6]	T	TG	3.171e^-6	0.492	INTRON Tep3	TF binding site mE1_TFBS_inv
X	7425374	X_7425374_SNP [dm3] X_7531341_SNP [dm6]	T	G	3.203e^-6	0.492	INTRON CG32719
X	5608175	X_5608175_SNP [dm3] X_5714142_SNP [dm6]	C	G	3.365e^-6	0.492	UPSTREAM CG33080 INTRON CG33080
2L	12797662	2L_12797662_SNP [dm3] 2L_12797662_SNP [dm6]	C	G	3.411e^-6	0.492	INTERGENIC
2L	18217562	2L_18217562_SNP [dm3] 2L_18217562_SNP [dm6]	A	T	4.423e^-6	0.524	INTRON CG42750
2L	2780343	2L_2780343_SNP [dm3] 2L_2780343_SNP [dm6]	G	T	4.497e^-6	0.524	UTR_3_PRIME Syt1 DOWNSTREAM Syt1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10907855	3R_10907855_SNP [dm3] 3R_15082133_SNP [dm6]	T	C	4.731e^-6	0.524	SYNONYMOUS_CODING CG6966	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	8580327	3L_8580327_SNP [dm3] 3L_8587227_SNP [dm6]	A	G	4.751e^-6	0.524	INTRON CG43078	TF binding site mE1_TFBS_chinmo
2R	18099929	2R_18099929_SNP [dm3] 2R_22212424_SNP [dm6]	G	A	5.993e^-6	0.589	UTR_3_PRIME CG11291 UPSTREAM ari-2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	7425090	X_7425090_SNP [dm3] X_7531057_SNP [dm6]	C	T	6.648e^-6	0.589	INTRON CG32719
2L	18303534	2L_18303534_SNP [dm3] 2L_18303534_SNP [dm6]	T	G	6.936e^-6	0.589	INTERGENIC	TF binding site mE1_TFBS_disco mE1_TFBS_HSA
3R	22876855	3R_22876855_SNP [dm3] 3R_27051133_SNP [dm6]	A	G	7.939e^-6	0.589	DOWNSTREAM TwdlT INTRON RYa-R
X	7425373	X_7425373_SNP [dm3] X_7531340_SNP [dm6]	A	T	8.007e^-6	0.589	INTRON CG32719
2L	7707046	2L_7707046_SNP [dm3] 2L_7707046_SNP [dm6]	C	G	8.064e^-6	0.589	INTRON Tep3	TF binding site mE1_TFBS_inv
X	18423805	X_18423805_SNP [dm3] X_18529772_SNP [dm6]	C	T	8.209e^-6	0.589	DOWNSTREAM CG15047 INTRON Bx
2R	17163755	2R_17163755_SNP [dm3] 2R_21276250_SNP [dm6]	T	G	8.253e^-6	0.589	SYNONYMOUS_CODING Rgk3
3L	22375742	3L_22375742_SNP [dm3] 3L_22382642_SNP [dm6]	T	A	8.392e^-6	0.589	INTRON Ten-m	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	18301140	2L_18301140_SNP [dm3] 2L_18301140_SNP [dm6]	T	G	8.896e^-6	0.589	INTERGENIC
3R	16254070	3R_16254070_SNP [dm3] 3R_20428348_SNP [dm6]	A	T	9.142e^-6	0.589	INTRON Gfrl
2L	15253153	2L_15253153_SNP [dm3] 2L_15253153_SNP [dm6]	A	G	9.460e^-6	0.589	UTR_3_PRIME dao INTRON dao
3R	15074176	3R_15074176_INS [dm3] 3R_19248454_INS [dm6]	C	CC	9.635e^-6	0.589	UPSTREAM CG5217 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	8585742	X_8585742_SNP [dm3] X_8691709_SNP [dm6]	G	A	9.728e^-6	0.589	UTR_3_PRIME Ogg1 DOWNSTREAM CG11294
2L	18277694	2L_18277694_SNP [dm3] 2L_18277694_SNP [dm6]	C	T	1.058e^-5	0.59	DOWNSTREAM CR44902 INTERGENIC
3R	13293022	3R_13293022_SNP [dm3] 3R_17467300_SNP [dm6]	A	G	1.094e^-5	0.59	INTERGENIC
3L	13635430	3L_13635430_SNP [dm3] 3L_13642330_SNP [dm6]	C	T	1.133e^-5	0.59	INTRON bru-3
2L	3720935	2L_3720935_SNP [dm3] 2L_3720935_SNP [dm6]	G	A	1.161e^-5	0.59	UPSTREAM Shaw INTRON Shaw
2L	18302524	2L_18302524_SNP [dm3] 2L_18302524_SNP [dm6]	G	A	1.182e^-5	0.59	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	18302591	2L_18302591_SNP [dm3] 2L_18302591_SNP [dm6]	A	G	1.237e^-5	0.59	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2R	19360697	2R_19360697_SNP [dm3] 2R_23473174_SNP [dm6]	C	T	1.244e^-5	0.59	NON_SYNONYMOUS_CODING Or59c INTRON CG43795
2L	14030366	2L_14030366_SNP [dm3] 2L_14030366_SNP [dm6]	A	G	1.255e^-5	0.59	SYNONYMOUS_CODING CG18095 DOWNSTREAM CG4500
3R	21902691	3R_21902691_SNP [dm3] 3R_26076969_SNP [dm6]	A	C	1.348e^-5	0.59	UTR_3_PRIME dys
3R	13838501	3R_13838501_SNP [dm3] 3R_18012779_SNP [dm6]	T	A	1.375e^-5	0.59	INTRON cpo
2L	18302532	2L_18302532_SNP [dm3] 2L_18302532_SNP [dm6]	T	A	1.398e^-5	0.59	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	8728881	3R_8728881_SNP [dm3] 3R_12903159_SNP [dm6]	A	T	1.448e^-5	0.59	INTERGENIC
X	576737	X_576737_SNP [dm3] X_682704_SNP [dm6]	T	C	1.450e^-5	0.59	INTERGENIC	TF binding site BDTNP1_TFBS_prd
3R	15198232	3R_15198232_INS [dm3] 3R_19372510_INS [dm6]	T	TA	1.460e^-5	0.59	INTRON Ino80	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA
2R	12547349	2R_12547349_SNP [dm3] 2R_16659844_SNP [dm6]	A	C	1.477e^-5	0.59	UPSTREAM Picot INTRON Picot
X	17166880	X_17166880_SNP [dm3] X_17272847_SNP [dm6]	T	A	1.478e^-5	0.59	INTRON f	TF binding site mE1_TFBS_cad
2L	18433602	2L_18433602_SNP [dm3] 2L_18433602_SNP [dm6]	A	G	1.544e^-5	0.597	EXON CR44488
2L	18302869	2L_18302869_SNP [dm3] 2L_18302869_SNP [dm6]	A	C	1.655e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	5527873	3L_5527873_SNP [dm3] 3L_5534773_SNP [dm6]	G	C	1.658e^-5	0.597	UTR_3_PRIME CG13285 INTRON CG13285
2L	18302683	2L_18302683_SNP [dm3] 2L_18302683_SNP [dm6]	G	C	1.724e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	18302714	2L_18302714_SNP [dm3] 2L_18302714_SNP [dm6]	T	G	1.794e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	18299615	2L_18299615_SNP [dm3] 2L_18299615_SNP [dm6]	G	A	1.831e^-5	0.597	INTERGENIC
2L	2378325	2L_2378325_SNP [dm3] 2L_2378325_SNP [dm6]	A	T	1.906e^-5	0.597	INTRON Atxn7	TF binding site mE1_TFBS_chinmo
3R	15195420	3R_15195420_SNP [dm3] 3R_19369698_SNP [dm6]	C	G	1.929e^-5	0.597	INTRON Ino80
3R	10838880	3R_10838880_SNP [dm3] 3R_15013158_SNP [dm6]	C	T	1.931e^-5	0.597	INTERGENIC
2L	18300912	2L_18300912_SNP [dm3] 2L_18300912_SNP [dm6]	T	C	2.004e^-5	0.597	INTERGENIC	TF binding site mE1_TFBS_sens
3R	10908454	3R_10908454_SNP [dm3] 3R_15082732_SNP [dm6]	G	A	2.013e^-5	0.597	SYNONYMOUS_CODING CG6966	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	15194584	3R_15194584_SNP [dm3] 3R_19368862_SNP [dm6]	T	C	2.111e^-5	0.597	DOWNSTREAM Ino80 INTERGENIC
X	18418964	X_18418964_SNP [dm3] X_18524931_SNP [dm6]	T	G	2.141e^-5	0.597	INTRON Bx
2L	18302676	2L_18302676_SNP [dm3] 2L_18302676_SNP [dm6]	T	A	2.152e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	18912041	3R_18912041_SNP [dm3] 3R_23086319_SNP [dm6]	T	G	2.224e^-5	0.597	INTRON CG13830	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	15701902	3L_15701902_DEL [dm3] 3L_15708802_DEL [dm6]	CAAACGATAGACTC...	C	2.272e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	4811570	3L_4811570_SNP [dm3] 3L_4811570_SNP [dm6]	G	T	2.303e^-5	0.597	SYNONYMOUS_CODING Dhc64C
3L	5528312	3L_5528312_SNP [dm3] 3L_5535212_SNP [dm6]	A	G	2.354e^-5	0.597	SYNONYMOUS_CODING CG13285
2L	18229019	2L_18229019_SNP [dm3] 2L_18229019_SNP [dm6]	G	A	2.364e^-5	0.597	INTRON CG42750
3R	19087945	3R_19087945_SNP [dm3] 3R_23262223_SNP [dm6]	C	T	2.384e^-5	0.597	UTR_3_PRIME orb
3L	11676191	3L_11676191_SNP [dm3] 3L_11683091_SNP [dm6]	T	C	2.407e^-5	0.597	SYNONYMOUS_CODING TfIIEalpha UPSTREAM Sug	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	18253062	2L_18253062_SNP [dm3] 2L_18253062_SNP [dm6]	T	A	2.432e^-5	0.597	DOWNSTREAM CG43406 INTRON CG42750
2L	18301695	2L_18301695_DEL [dm3] 2L_18301695_DEL [dm6]	CGA	AT	2.535e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	18447251	3L_18447251_SNP [dm3] 3L_18454151_SNP [dm6]	G	T	2.569e^-5	0.597	INTERGENIC
2L	18301794	2L_18301794_SNP [dm3] 2L_18301794_SNP [dm6]	C	T	2.589e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	16660016	X_16660016_SNP [dm3] X_16765983_SNP [dm6]	T	A	2.594e^-5	0.597	INTRON if
3L	12850965	3L_12850965_INS [dm3] 3L_12857865_INS [dm6]	C	CC	2.642e^-5	0.597	UTR_3_PRIME CG32107 DOWNSTREAM Ent3	TF binding site mE1_TFBS_kn
2L	14108969	2L_14108969_SNP [dm3] 2L_14108969_SNP [dm6]	C	T	2.646e^-5	0.597	NON_SYNONYMOUS_CODING CG15293 DOWNSTREAM CG31769
3R	15194698	3R_15194698_INS [dm3] 3R_19368976_INS [dm6]	A	AA	2.646e^-5	0.597	DOWNSTREAM Ino80 INTERGENIC
3R	10502348	3R_10502348_SNP [dm3] 3R_14676626_SNP [dm6]	T	C	2.673e^-5	0.597	INTRON Meltrin
2L	18228863	2L_18228863_SNP [dm3] 2L_18228863_SNP [dm6]	T	C	2.691e^-5	0.597	INTRON CG42750
2L	18301822	2L_18301822_SNP [dm3] 2L_18301822_SNP [dm6]	A	G	2.696e^-5	0.597	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	17371001	X_17371001_SNP [dm3] X_17476968_SNP [dm6]	G	C	2.746e^-5	0.597	INTRON CG43658
X	21813713	X_21813713_SNP [dm3] X_22411878_SNP [dm6]	G	C	2.750e^-5	0.597	INTERGENIC	transposable element FlyBase
3R	24165600	3R_24165600_SNP [dm3] 3R_28339878_SNP [dm6]	G	C	2.761e^-5	0.597	UPSTREAM Moca-cyp & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	1752097	3L_1752097_SNP [dm3] 3L_1752097_SNP [dm6]	A	G	2.763e^-5	0.597	UTR_3_PRIME CG13921 DOWNSTREAM Cht2
2L	18249634	2L_18249634_SNP [dm3] 2L_18249634_SNP [dm6]	G	A	2.770e^-5	0.597	INTRON CG42750
X	10436856	X_10436856_SNP [dm3] X_10542823_SNP [dm6]	G	T	2.790e^-5	0.597	INTRON spri
2L	18235492	2L_18235492_SNP [dm3] 2L_18235492_SNP [dm6]	C	T	2.796e^-5	0.597	INTRON CG42750	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3R	24747991	3R_24747991_SNP [dm3] 3R_28922269_SNP [dm6]	G	C	2.800e^-5	0.597	UTR_3_PRIME Doa UPSTREAM CG11828 DOWNSTREAM Doa
3R	21523396	3R_21523396_SNP [dm3] 3R_25697674_SNP [dm6]	G	A	2.847e^-5	0.597	INTERGENIC
3R	21903301	3R_21903301_SNP [dm3] 3R_26077579_SNP [dm6]	A	C	2.860e^-5	0.597	NON_SYNONYMOUS_CODING dys	TF binding site mE1_TFBS_cad
2L	18249824	2L_18249824_SNP [dm3] 2L_18249824_SNP [dm6]	G	T	2.874e^-5	0.597	INTRON CG42750
3R	3131860	3R_3131860_SNP [dm3] 3R_7306138_SNP [dm6]	C	T	2.898e^-5	0.597	INTRON rn
3L	18447280	3L_18447280_SNP [dm3] 3L_18454180_SNP [dm6]	T	C	3.012e^-5	0.614	INTERGENIC
3R	5118274	3R_5118274_SNP [dm3] 3R_9292552_SNP [dm6]	G	A	3.077e^-5	0.616	INTERGENIC
2L	18304935	2L_18304935_SNP [dm3] 2L_18304935_SNP [dm6]	G	C	3.098e^-5	0.616	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
3R	15710848	3R_15710848_SNP [dm3] 3R_19885126_SNP [dm6]	T	G	3.170e^-5	0.616	INTRON Pk92B
2L	18300970	2L_18300970_SNP [dm3] 2L_18300970_SNP [dm6]	C	G	3.217e^-5	0.616	INTERGENIC	TF binding site mE1_TFBS_sens
3R	21535190	3R_21535190_SNP [dm3] 3R_25709468_SNP [dm6]	A	G	3.233e^-5	0.616	SYNONYMOUS_CODING LpR2 INTRON LpR2
2R	14991539	2R_14991539_SNP [dm3] 2R_19104034_SNP [dm6]	G	A	3.243e^-5	0.616	INTRON 5-HT1A
2L	18298074	2L_18298074_SNP [dm3] 2L_18298074_SNP [dm6]	C	G	3.300e^-5	0.616	DOWNSTREAM CG5790 INTERGENIC
3R	13795765	3R_13795765_SNP [dm3] 3R_17970043_SNP [dm6]	C	A	3.301e^-5	0.616	INTRON cpo
3L	3551892	3L_3551892_SNP [dm3] 3L_3551892_SNP [dm6]	G	T	3.317e^-5	0.616	INTRON Eip63E
2L	18302678	2L_18302678_SNP [dm3] 2L_18302678_SNP [dm6]	T	C	3.388e^-5	0.623	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
X	20690020	X_20690020_SNP [dm3] X_20818993_SNP [dm6]	G	A	3.500e^-5	0.631	INTRON shakB	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	21842683	3L_21842683_SNP [dm3] 3L_21849583_SNP [dm6]	G	C	3.570e^-5	0.631	INTRON mub
2R	7923345	2R_7923345_SNP [dm3] 2R_12035840_SNP [dm6]	C	T	3.572e^-5	0.631	SYNONYMOUS_CODING CG8321 DOWNSTREAM CG43191
2L	2110938	2L_2110938_SNP [dm3] 2L_2110938_SNP [dm6]	T	C	3.574e^-5	0.631	INTERGENIC	TF binding site mE1_TFBS_bab1
3L	12357211	3L_12357211_SNP [dm3] 3L_12364111_SNP [dm6]	T	C	3.724e^-5	0.631	INTERGENIC
3L	12850952	3L_12850952_SNP [dm3] 3L_12857852_SNP [dm6]	T	C	3.732e^-5	0.631	UTR_3_PRIME CG32107 DOWNSTREAM Ent3	TF binding site mE1_TFBS_kn
2R	18561413	2R_18561413_SNP [dm3] 2R_22673908_SNP [dm6]	G	A	3.771e^-5	0.631	UPSTREAM CR44761 DOWNSTREAM RYBP INTERGENIC
2L	18297712	2L_18297712_SNP [dm3] 2L_18297712_SNP [dm6]	G	A	3.797e^-5	0.631	DOWNSTREAM CG5790 INTERGENIC
2L	12708624	2L_12708624_SNP [dm3] 2L_12708624_SNP [dm6]	C	T	3.916e^-5	0.631	UTR_3_PRIME CG6180 UPSTREAM CG15484 DOWNSTREAM CG5787
2L	18694507	2L_18694507_SNP [dm3] 2L_18694507_SNP [dm6]	C	T	3.944e^-5	0.631	INTRON CG10383	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens mE1_TFBS_ttk
2L	18301778	2L_18301778_SNP [dm3] 2L_18301778_SNP [dm6]	A	C	3.991e^-5	0.631	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	20483059	X_20483059_INS [dm3] X_20612032_INS [dm6]	T	TA	4.014e^-5	0.631	INTRON RunxA
2L	18301758	2L_18301758_SNP [dm3] 2L_18301758_SNP [dm6]	T	C	4.032e^-5	0.631	INTERGENIC	TF binding site BDTNP1_TFBS_da
3R	2918027	3R_2918027_SNP [dm3] 3R_7092305_SNP [dm6]	C	A	4.062e^-5	0.631	DOWNSTREAM CR43685 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	7707053	2L_7707053_DEL [dm3] 2L_7707053_DEL [dm6]	TTAT	G	4.068e^-5	0.631	INTRON Tep3	TF binding site mE1_TFBS_inv
3R	8721536	3R_8721536_SNP [dm3] 3R_12895814_SNP [dm6]	T	A	4.089e^-5	0.631	INTERGENIC	transposable element FlyBase
X	14703852	X_14703852_INS [dm3] X_14809819_INS [dm6]	A	ATAA	4.101e^-5	0.631	INTRON rut
3L	2165251	3L_2165251_SNP [dm3] 3L_2165251_SNP [dm6]	A	G	4.115e^-5	0.631	INTERGENIC
2L	18225041	2L_18225041_SNP [dm3] 2L_18225041_SNP [dm6]	G	A	4.138e^-5	0.631	INTRON CG42750
3R	8710071	3R_8710071_INS [dm3] 3R_12884349_INS [dm6]	C	CA	4.205e^-5	0.631	INTERGENIC
2L	2155452	2L_2155452_SNP [dm3] 2L_2155452_SNP [dm6]	A	G	4.256e^-5	0.631	UPSTREAM CG15382 DOWNSTREAM AIF INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	7707150	2L_7707150_SNP [dm3] 2L_7707150_SNP [dm6]	C	G	4.298e^-5	0.631	SYNONYMOUS_CODING Tep3 DOWNSTREAM CR44990	TF binding site mE1_TFBS_inv
2L	18304408	2L_18304408_SNP [dm3] 2L_18304408_SNP [dm6]	C	G	4.303e^-5	0.631	INTERGENIC	TF binding site BDTNP1_TFBS_prd
2R	19575501	2R_19575501_SNP [dm3] 2R_23687978_SNP [dm6]	C	T	4.385e^-5	0.631	UTR_3_PRIME St3 UPSTREAM Pal2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3L	2023855	3L_2023855_SNP [dm3] 3L_2023855_SNP [dm6]	A	G	4.410e^-5	0.631	UPSTREAM CG42356 INTERGENIC
2L	18228830	2L_18228830_SNP [dm3] 2L_18228830_SNP [dm6]	G	T	4.412e^-5	0.631	INTRON CG42750
X	14706600	X_14706600_SNP [dm3] X_14812567_SNP [dm6]	C	T	4.412e^-5	0.631	INTRON rut
3R	18805329	3R_18805329_SNP [dm3] 3R_22979607_SNP [dm6]	G	T	4.414e^-5	0.631	INTERGENIC
2L	9634016	2L_9634016_SNP [dm3] 2L_9634016_SNP [dm6]	A	C	4.440e^-5	0.631	UPSTREAM Apoltp INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	18316805	2L_18316805_SNP [dm3] 2L_18316805_SNP [dm6]	T	C	4.443e^-5	0.631	INTERGENIC
2L	14108972	2L_14108972_SNP [dm3] 2L_14108972_SNP [dm6]	A	G	4.637e^-5	0.654	SYNONYMOUS_CODING CG15293 DOWNSTREAM CG31769
2L	13698952	2L_13698952_INS [dm3] 2L_13698952_INS [dm6]	C	CC	4.745e^-5	0.66	INTRON CG31814	TF binding site mE1_TFBS_sbb
2L	18299813	2L_18299813_SNP [dm3] 2L_18299813_SNP [dm6]	C	A	4.753e^-5	0.66	INTERGENIC
2L	2110931	2L_2110931_SNP [dm3] 2L_2110931_SNP [dm6]	T	A	4.826e^-5	0.663	INTERGENIC	TF binding site mE1_TFBS_bab1
2L	11344273	2L_11344273_SNP [dm3] 2L_11344273_SNP [dm6]	G	A	4.870e^-5	0.663	UPSTREAM CG14926 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
3R	22928270	3R_22928270_SNP [dm3] 3R_27102548_SNP [dm6]	G	A	4.880e^-5	0.663	SYNONYMOUS_CODING CG17189 DOWNSTREAM CG6074
2R	17502641	2R_17502641_SNP [dm3] 2R_21615136_SNP [dm6]	T	C	4.917e^-5	0.663	UTR_3_PRIME CG18870
X	11602479	X_11602479_SNP [dm3] X_11708446_SNP [dm6]	A	G	5.010e^-5	0.669	SYNONYMOUS_CODING FucT6
2L	2395569	2L_2395569_SNP [dm3] 2L_2395569_SNP [dm6]	T	G	5.073e^-5	0.669	INTRON VGlut
2L	2378353	2L_2378353_SNP [dm3] 2L_2378353_SNP [dm6]	T	C	5.216e^-5	0.669	SYNONYMOUS_CODING Atxn7	TF binding site mE1_TFBS_chinmo
3L	1915632	3L_1915632_SNP [dm3] 3L_1915632_SNP [dm6]	G	C	5.270e^-5	0.669	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	18227899	3L_18227899_DEL [dm3] 3L_18234799_DEL [dm6]	CTTA	C	5.296e^-5	0.669	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	18316285	2L_18316285_SNP [dm3] 2L_18316285_SNP [dm6]	A	T	5.308e^-5	0.669	INTERGENIC
3L	7479680	3L_7479680_SNP [dm3] 3L_7486580_SNP [dm6]	A	G	5.411e^-5	0.669	INTRON mthl6	TF binding site mE1_TFBS_sens
2L	11344259	2L_11344259_DEL [dm3] 2L_11344259_DEL [dm6]	AT	A	5.423e^-5	0.669	UPSTREAM CG14926 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
3R	2999426	3R_2999426_INS [dm3] 3R_7173704_INS [dm6]	T	TG	5.436e^-5	0.669	INTRON sas
3R	2966754	3R_2966754_DEL [dm3] 3R_7141032_DEL [dm6]	AG	A	5.454e^-5	0.669	INTRON Fer1	transposable element FlyBase
X	6874218	X_6874218_SNP [dm3] X_6980185_SNP [dm6]	G	T	5.463e^-5	0.669	INTRON ogre	TF binding site mE1_TFBS_sens
3R	4063342	3R_4063342_SNP [dm3] 3R_8237620_SNP [dm6]	G	T	5.471e^-5	0.669	NON_SYNONYMOUS_CODING Ada2b UTR_3_PRIME Ada2b DOWNSTREAM DNApol-iota
2L	2110932	2L_2110932_SNP [dm3] 2L_2110932_SNP [dm6]	T	C	5.474e^-5	0.669	INTERGENIC	TF binding site mE1_TFBS_bab1
3R	2966739	3R_2966739_DEL [dm3] 3R_7141017_DEL [dm6]	AACTCTCAGGTTC...	A	5.480e^-5	0.669	INTRON Fer1	transposable element FlyBase
2L	13696756	2L_13696756_SNP [dm3] 2L_13696756_SNP [dm6]	A	C	5.584e^-5	0.669	INTRON CG31814
3R	2915750	3R_2915750_SNP [dm3] 3R_7090028_SNP [dm6]	C	T	5.601e^-5	0.669	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_zfh1
2L	3378521	2L_3378521_SNP [dm3] 2L_3378521_SNP [dm6]	G	A	5.649e^-5	0.669	UTR_3_PRIME Ptpa
3L	18227931	3L_18227931_SNP [dm3] 3L_18234831_SNP [dm6]	G	T	5.661e^-5	0.669	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	16304692	2L_16304692_SNP [dm3] 2L_16304692_SNP [dm6]	T	C	5.665e^-5	0.669	NON_SYNONYMOUS_CODING c_2_M
3L	18227896	3L_18227896_SNP [dm3] 3L_18234796_SNP [dm6]	C	T	5.742e^-5	0.669	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	17158258	X_17158258_SNP [dm3] X_17264225_SNP [dm6]	C	A	5.812e^-5	0.669	INTRON f	TF binding site mE1_TFBS_inv
2L	14067069	2L_14067069_SNP [dm3] 2L_14067069_SNP [dm6]	G	C	5.838e^-5	0.669	INTRON nAChRalpha5
X	16660114	X_16660114_SNP [dm3] X_16766081_SNP [dm6]	G	C	5.842e^-5	0.669	INTRON if
2L	18228874	2L_18228874_SNP [dm3] 2L_18228874_SNP [dm6]	G	A	5.845e^-5	0.669	INTRON CG42750
2L	18228842	2L_18228842_SNP [dm3] 2L_18228842_SNP [dm6]	A	G	5.852e^-5	0.669	INTRON CG42750
3R	10908294	3R_10908294_SNP [dm3] 3R_15082572_SNP [dm6]	G	A	5.889e^-5	0.669	SYNONYMOUS_CODING CG6966	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	3080534	3R_3080534_SNP [dm3] 3R_7254812_SNP [dm6]	C	T	5.962e^-5	0.669	INTRON Gld
3R	18573362	3R_18573362_SNP [dm3] 3R_22747640_SNP [dm6]	T	G	6.003e^-5	0.669	UPSTREAM CG17141 DOWNSTREAM CG31139 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	22250112	3R_22250112_SNP [dm3] 3R_26424390_SNP [dm6]	A	T	6.024e^-5	0.669	UPSTREAM CR31084 DOWNSTREAM CG6503 & 1 other INTERGENIC
3R	22200403	3R_22200403_SNP [dm3] 3R_26374681_SNP [dm6]	G	A	6.056e^-5	0.669	INTERGENIC
X	8927392	X_8927392_SNP [dm3] X_9033359_SNP [dm6]	A	G	6.062e^-5	0.669	INTRON CR43836 & 1 other
X	18419209	X_18419209_SNP [dm3] X_18525176_SNP [dm6]	T	C	6.098e^-5	0.669	INTRON Bx
3L	5148724	3L_5148724_SNP [dm3] 3L_5155624_SNP [dm6]	A	G	6.201e^-5	0.671	DOWNSTREAM Srp54k & 1 other INTERGENIC
3L	1893179	3L_1893179_SNP [dm3] 3L_1893179_SNP [dm6]	G	C	6.209e^-5	0.671	DOWNSTREAM CG1887 INTERGENIC
2L	14626252	2L_14626252_SNP [dm3] 2L_14626252_SNP [dm6]	A	G	6.229e^-5	0.671	INTRON osp
2L	18694502	2L_18694502_SNP [dm3] 2L_18694502_SNP [dm6]	A	G	6.264e^-5	0.671	INTRON CG10383	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens mE1_TFBS_ttk
X	6644393	X_6644393_DEL [dm3] X_6750360_DEL [dm6]	TT	T	6.360e^-5	0.678	INTRON CG14439
3R	10878723	3R_10878723_SNP [dm3] 3R_15053001_SNP [dm6]	T	A	6.417e^-5	0.68	INTERGENIC
2L	17364802	2L_17364802_SNP [dm3] 2L_17364802_SNP [dm6]	G	A	6.455e^-5	0.68	DOWNSTREAM CG31804 INTERGENIC
3L	9481360	3L_9481360_SNP [dm3] 3L_9488260_SNP [dm6]	C	A	6.544e^-5	0.682	UPSTREAM pall INTRON CG32036	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	18138249	3L_18138249_SNP [dm3] 3L_18145149_SNP [dm6]	C	T	6.549e^-5	0.682	UTR_3_PRIME gk
2R	10893481	2R_10893481_DEL [dm3] 2R_15005976_DEL [dm6]	AGG	T	6.666e^-5	0.691	INTERGENIC
3L	7431226	3L_7431226_SNP [dm3] 3L_7438126_SNP [dm6]	G	T	6.723e^-5	0.692	UPSTREAM CG14835 DOWNSTREAM sphinx1 INTRON CG42458
X	17248700	X_17248700_SNP [dm3] X_17354667_SNP [dm6]	G	C	6.778e^-5	0.692	INTERGENIC
2L	9990239	2L_9990239_SNP [dm3] 2L_9990239_SNP [dm6]	T	C	6.857e^-5	0.692	INTRON bib	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3L	9093854	3L_9093854_SNP [dm3] 3L_9100754_SNP [dm6]	A	G	6.908e^-5	0.692	UTR_3_PRIME bol DOWNSTREAM bol
3L	3497870	3L_3497870_DEL [dm3] 3L_3497870_DEL [dm6]	GGTTGATGATGTTACAATAT...	G	6.915e^-5	0.692	INTRON CG42324
X	12044161	X_12044161_SNP [dm3] X_12150128_SNP [dm6]	T	G	6.999e^-5	0.692	INTRON Ten-a
3L	9167569	3L_9167569_SNP [dm3] 3L_9174469_SNP [dm6]	G	C	7.022e^-5	0.692	INTRON Rdl
2L	15258456	2L_15258456_SNP [dm3] 2L_15258456_SNP [dm6]	A	C	7.112e^-5	0.692	DOWNSTREAM l_2_35Cc INTRON yuri
3R	6042326	3R_6042326_INS [dm3] 3R_10216604_INS [dm6]	T	TAAATTAAATA...	7.140e^-5	0.692	INTRON Syn
2R	4957426	2R_4957426_SNP [dm3] 2R_9069921_SNP [dm6]	A	T	7.148e^-5	0.692	INTRON ana	TF binding site mE1_TFBS_GATAe mE1_TFBS_HSA
3L	12357327	3L_12357327_SNP [dm3] 3L_12364227_SNP [dm6]	A	T	7.280e^-5	0.692	INTERGENIC
2L	12708625	2L_12708625_SNP [dm3] 2L_12708625_SNP [dm6]	T	C	7.282e^-5	0.692	UTR_3_PRIME CG6180 UPSTREAM CG15484 DOWNSTREAM CG5787
2R	4145839	2R_4145839_SNP [dm3] 2R_8258334_SNP [dm6]	G	T	7.290e^-5	0.692	UPSTREAM CG30369 INTERGENIC
3R	8679801	3R_8679801_SNP [dm3] 3R_12854079_SNP [dm6]	C	G	7.363e^-5	0.692	INTERGENIC
2L	18228870	2L_18228870_SNP [dm3] 2L_18228870_SNP [dm6]	T	A	7.560e^-5	0.692	INTRON CG42750
3R	6496839	3R_6496839_SNP [dm3] 3R_10671117_SNP [dm6]	T	G	7.586e^-5	0.692	INTERGENIC
X	20483473	X_20483473_SNP [dm3] X_20612446_SNP [dm6]	T	G	7.603e^-5	0.692	INTRON RunxA
3L	9333268	3L_9333268_SNP [dm3] 3L_9340168_SNP [dm6]	G	T	7.748e^-5	0.692	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
X	6379884	X_6379884_SNP [dm3] X_6485851_SNP [dm6]	A	T	7.782e^-5	0.692	INTRON CG42340
3R	11705273	3R_11705273_SNP [dm3] 3R_15879551_SNP [dm6]	C	G	7.799e^-5	0.692	INTERGENIC
X	12206276	X_12206276_SNP [dm3] X_12312243_SNP [dm6]	C	T	7.893e^-5	0.692	INTRON Ten-a
3R	22928273	3R_22928273_SNP [dm3] 3R_27102551_SNP [dm6]	C	A	7.905e^-5	0.692	NON_SYNONYMOUS_CODING CG17189 DOWNSTREAM CG6074
2R	6687022	2R_6687022_SNP [dm3] 2R_10799517_SNP [dm6]	G	A	7.915e^-5	0.692	UPSTREAM CG33144 DOWNSTREAM wde INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19364076	2R_19364076_SNP [dm3] 2R_23476553_SNP [dm6]	A	T	8.020e^-5	0.692	UPSTREAM CR43792 & 1 other DOWNSTREAM CR43793 INTRON CG43795
2R	6873955	2R_6873955_SNP [dm3] 2R_10986450_SNP [dm6]	C	T	8.048e^-5	0.692	INTRON luna
2L	1479702	2L_1479702_SNP [dm3] 2L_1479702_SNP [dm6]	G	T	8.080e^-5	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
X	16212614	X_16212614_SNP [dm3] X_16318581_SNP [dm6]	G	A	8.107e^-5	0.692	SYNONYMOUS_CODING Cyp1 DOWNSTREAM CG13957	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2L	1541104	2L_1541104_SNP [dm3] 2L_1541104_SNP [dm6]	G	A	8.115e^-5	0.692	INTERGENIC
2L	2711711	2L_2711711_SNP [dm3] 2L_2711711_SNP [dm6]	A	G	8.127e^-5	0.692	SYNONYMOUS_CODING CG31690	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15378966	2R_15378966_SNP [dm3] 2R_19491461_SNP [dm6]	A	G	8.201e^-5	0.692	SYNONYMOUS_CODING Oseg6 UPSTREAM Rep	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_sens
3L	4099518	3L_4099518_SNP [dm3] 3L_4099518_SNP [dm6]	T	G	8.227e^-5	0.692	INTRON CG14995	TF binding site mE1_TFBS_inv
X	15676242	X_15676242_DEL [dm3] X_15782209_DEL [dm6]	AA	A	8.259e^-5	0.692	INTRON Efhc1.1
3L	16726599	3L_16726599_SNP [dm3] 3L_16733499_SNP [dm6]	G	T	8.296e^-5	0.692	UPSTREAM CG9701 INTERGENIC
3R	8658043	3R_8658043_SNP [dm3] 3R_12832321_SNP [dm6]	C	T	8.314e^-5	0.692	INTERGENIC
2R	18561412	2R_18561412_SNP [dm3] 2R_22673907_SNP [dm6]	T	C	8.332e^-5	0.692	UPSTREAM CR44761 DOWNSTREAM RYBP INTERGENIC
3R	5013334	3R_5013334_SNP [dm3] 3R_9187612_SNP [dm6]	G	A	8.334e^-5	0.692	INTRON pum	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	9333257	3L_9333257_SNP [dm3] 3L_9340157_SNP [dm6]	A	T	8.388e^-5	0.692	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	18017451	2R_18017451_SNP [dm3] 2R_22129946_SNP [dm6]	C	A	8.410e^-5	0.692	DOWNSTREAM CG34205 INTRON NtR	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	15253108	3L_15253108_SNP [dm3] 3L_15260008_SNP [dm6]	A	G	8.454e^-5	0.692	INTERGENIC	TF binding site mE1_TFBS_inv
X	7433303	X_7433303_SNP [dm3] X_7539270_SNP [dm6]	T	A	8.536e^-5	0.692	INTRON CG32719
2L	18304972	2L_18304972_DEL [dm3] 2L_18304972_DEL [dm6]	GG	G	8.611e^-5	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	2161851	2L_2161851_SNP [dm3] 2L_2161851_SNP [dm6]	G	A	8.626e^-5	0.692	UPSTREAM aop INTRON aop	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2R	8850238	2R_8850238_SNP [dm3] 2R_12962733_SNP [dm6]	C	T	8.640e^-5	0.692	INTERGENIC
X	13312799	X_13312799_SNP [dm3] X_13418766_SNP [dm6]	C	T	8.642e^-5	0.692	SYNONYMOUS_CODING Set2	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	5351422	2R_5351422_SNP [dm3] 2R_9463917_SNP [dm6]	C	T	8.670e^-5	0.692	UPSTREAM Camta INTRON Camta
3R	15074031	3R_15074031_SNP [dm3] 3R_19248309_SNP [dm6]	A	G	8.784e^-5	0.692	UPSTREAM CG5217 INTERGENIC	TF binding site mE1_TFBS_inv
3R	2966732	3R_2966732_DEL [dm3] 3R_7141010_DEL [dm6]	TATC	T	8.813e^-5	0.692	INTRON Fer1	transposable element FlyBase
2L	11140775	2L_11140775_SNP [dm3] 2L_11140775_SNP [dm6]	G	C	8.827e^-5	0.692	INTRON Gyc32E
3L	12357320	3L_12357320_SNP [dm3] 3L_12364220_SNP [dm6]	A	G	8.844e^-5	0.692	INTERGENIC
X	10436823	X_10436823_SNP [dm3] X_10542790_SNP [dm6]	C	T	8.867e^-5	0.692	INTRON spri
2R	19227052	2R_19227052_SNP [dm3] 2R_23339529_SNP [dm6]	T	G	8.920e^-5	0.692	INTERGENIC
3R	9705916	3R_9705916_SNP [dm3] 3R_13880194_SNP [dm6]	G	T	8.966e^-5	0.692	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	18303410	2L_18303410_SNP [dm3] 2L_18303410_SNP [dm6]	G	C	8.977e^-5	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_disco mE1_TFBS_HSA
2R	19359736	2R_19359736_INS [dm3] 2R_23472213_INS [dm6]	A	AAAGTTGA	9.017e^-5	0.692	UPSTREAM Or59b DOWNSTREAM Or59c INTRON CG43795
2L	13700034	2L_13700034_SNP [dm3] 2L_13700034_SNP [dm6]	G	C	9.028e^-5	0.692	INTRON CG31814
3R	22886636	3R_22886636_SNP [dm3] 3R_27060914_SNP [dm6]	G	T	9.037e^-5	0.692	SYNONYMOUS_CODING Nep5
3R	1668558	3R_1668558_SNP [dm3] 3R_5842836_SNP [dm6]	C	T	9.067e^-5	0.692	INTRON CG1213
X	6809676	X_6809676_DEL [dm3] X_6915643_DEL [dm6]	TGGCTT	T	9.078e^-5	0.692	INTRON CG14431
X	20224332	X_20224332_SNP [dm3] X_20353305_SNP [dm6]	G	A	9.094e^-5	0.692	INTERGENIC
X	13809491	X_13809491_SNP [dm3] X_13915458_SNP [dm6]	A	C	9.156e^-5	0.692	INTRON mamo
3R	10964677	3R_10964677_SNP [dm3] 3R_15138955_SNP [dm6]	T	G	9.198e^-5	0.692	UTR_3_PRIME CG3984 EXON CR45600	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
4	1222936	4_1222936_SNP [dm3] 4_1219210_SNP [dm6]	A	G	9.199e^-5	0.692	NON_SYNONYMOUS_CODING Mitf INTRON Mitf
3L	18447243	3L_18447243_SNP [dm3] 3L_18454143_SNP [dm6]	T	A	9.218e^-5	0.692	INTERGENIC
2L	18314708	2L_18314708_SNP [dm3] 2L_18314708_SNP [dm6]	T	A	9.331e^-5	0.692	UPSTREAM CR44489 INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	15680830	X_15680830_SNP [dm3] X_15786797_SNP [dm6]	T	C	9.350e^-5	0.692	SYNONYMOUS_CODING mRpS30	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	3989680	2R_3989680_SNP [dm3] 2R_8102175_SNP [dm6]	G	A	9.408e^-5	0.692	UTR_3_PRIME CG11210 DOWNSTREAM Cul4
3R	13791626	3R_13791626_SNP [dm3] 3R_17965904_SNP [dm6]	C	T	9.441e^-5	0.692	INTRON cpo
3R	9761822	3R_9761822_SNP [dm3] 3R_13936100_SNP [dm6]	G	T	9.458e^-5	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	2264305	2L_2264305_SNP [dm3] 2L_2264305_SNP [dm6]	T	C	9.532e^-5	0.692	NON_SYNONYMOUS_CODING CG34049 DOWNSTREAM CG4270
3L	10421010	3L_10421010_SNP [dm3] 3L_10427910_SNP [dm6]	C	T	9.643e^-5	0.692	INTERGENIC	TF binding site mE1_TFBS_bab1
2L	12797679	2L_12797679_SNP [dm3] 2L_12797679_SNP [dm6]	G	T	9.663e^-5	0.692	INTERGENIC
2L	18298179	2L_18298179_SNP [dm3] 2L_18298179_SNP [dm6]	A	T	9.679e^-5	0.692	DOWNSTREAM CG5790 INTERGENIC
3L	12850957	3L_12850957_INS [dm3] 3L_12857857_INS [dm6]	A	AT	9.690e^-5	0.692	UTR_3_PRIME CG32107 DOWNSTREAM Ent3	TF binding site mE1_TFBS_kn
2L	12398853	2L_12398853_SNP [dm3] 2L_12398853_SNP [dm6]	A	T	9.837e^-5	0.692	SYNONYMOUS_CODING Pkd2
3R	22144635	3R_22144635_SNP [dm3] 3R_26318913_SNP [dm6]	T	C	9.852e^-5	0.692	UTR_5_PRIME CG33970
3R	24238243	3R_24238243_SNP [dm3] 3R_28412521_SNP [dm6]	C	G	9.858e^-5	0.692	INTERGENIC
3R	11867549	3R_11867549_SNP [dm3] 3R_16041827_SNP [dm6]	G	C	9.896e^-5	0.692	DOWNSTREAM pnr INTERGENIC
X	14952495	X_14952495_SNP [dm3] X_15058462_SNP [dm6]	A	G	9.933e^-5	0.692	SYNONYMOUS_CODING hiw	TF binding site mE1_TFBS_chinmo
2L	13694812	2L_13694812_SNP [dm3] 2L_13694812_SNP [dm6]	C	G	9.948e^-5	0.692	INTRON CG31814
3L	12357316	3L_12357316_SNP [dm3] 3L_12364216_SNP [dm6]	A	C	9.980e^-5	0.692	INTERGENIC
3L	11037674	3L_11037674_SNP [dm3] 3L_11044574_SNP [dm6]	G	T	1.002e^-4	0.692	INTRON CG43693	TF binding site BDTNP1_TFBS_dl
X	8927384	X_8927384_SNP [dm3] X_9033351_SNP [dm6]	T	C	1.005e^-4	0.692	INTRON CR43836 & 1 other
2L	1696065	2L_1696065_SNP [dm3] 2L_1696065_SNP [dm6]	T	G	1.010e^-4	0.692	SYNONYMOUS_CODING chinmo	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	11147384	2L_11147384_SNP [dm3] 2L_11147384_SNP [dm6]	G	A	1.013e^-4	0.692	INTRON Gyc32E
2R	10891333	2R_10891333_SNP [dm3] 2R_15003828_SNP [dm6]	G	A	1.015e^-4	0.692	INTERGENIC
X	5966532	X_5966532_SNP [dm3] X_6072499_SNP [dm6]	A	C	1.017e^-4	0.692	INTRON Tsp5D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	12357469	3L_12357469_SNP [dm3] 3L_12364369_SNP [dm6]	C	T	1.024e^-4	0.692	INTERGENIC
2R	12547397	2R_12547397_SNP [dm3] 2R_16659892_SNP [dm6]	A	G	1.033e^-4	0.692	UPSTREAM Picot INTRON Picot
2L	9164404	2L_9164404_SNP [dm3] 2L_9164404_SNP [dm6]	T	C	1.039e^-4	0.692	SYNONYMOUS_CODING CG13108 DOWNSTREAM CG32982	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	5388789	2R_5388789_SNP [dm3] 2R_9501284_SNP [dm6]	T	C	1.043e^-4	0.692	INTRON Wnt2
2L	18305581	2L_18305581_SNP [dm3] 2L_18305581_SNP [dm6]	C	G	1.043e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	18419232	X_18419232_SNP [dm3] X_18525199_SNP [dm6]	C	T	1.044e^-4	0.692	INTRON Bx
2L	15253055	2L_15253055_SNP [dm3] 2L_15253055_SNP [dm6]	A	G	1.046e^-4	0.692	UTR_3_PRIME dao INTRON dao
2L	15034903	2L_15034903_SNP [dm3] 2L_15034903_SNP [dm6]	G	A	1.046e^-4	0.692	UPSTREAM yellow-c DOWNSTREAM GABA-B-R1 INTERGENIC
3R	24699122	3R_24699122_SNP [dm3] 3R_28873400_SNP [dm6]	A	G	1.053e^-4	0.692	SYNONYMOUS_CODING CG14529 INTRON CG33203	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	14713059	3R_14713059_SNP [dm3] 3R_18887337_SNP [dm6]	A	G	1.056e^-4	0.692	INTERGENIC
3L	3496621	3L_3496621_SNP [dm3] 3L_3496621_SNP [dm6]	T	C	1.056e^-4	0.692	INTRON CG42324
X	21838572	X_21838572_SNP [dm3] X_22436737_SNP [dm6]	C	T	1.060e^-4	0.692	INTERGENIC
2R	6843205	2R_6843205_SNP [dm3] 2R_10955700_SNP [dm6]	G	A	1.072e^-4	0.692	INTERGENIC
3L	13673278	3L_13673278_SNP [dm3] 3L_13680178_SNP [dm6]	C	T	1.075e^-4	0.692	INTRON bru-3
3R	2952408	3R_2952408_SNP [dm3] 3R_7126686_SNP [dm6]	C	T	1.075e^-4	0.692	UTR_3_PRIME CG10068 DOWNSTREAM CG10098
2L	11147662	2L_11147662_SNP [dm3] 2L_11147662_SNP [dm6]	T	C	1.076e^-4	0.692	INTRON Gyc32E
3R	5127981	3R_5127981_SNP [dm3] 3R_9302259_SNP [dm6]	T	C	1.077e^-4	0.692	INTRON CG8861
2R	18560953	2R_18560953_SNP [dm3] 2R_22673448_SNP [dm6]	A	G	1.078e^-4	0.692	DOWNSTREAM RYBP EXON CR44761	TF binding site mE1_TFBS_HSA
2L	18277661	2L_18277661_SNP [dm3] 2L_18277661_SNP [dm6]	A	G	1.081e^-4	0.692	DOWNSTREAM CR44902 INTERGENIC
2R	4149997	2R_4149997_SNP [dm3] 2R_8262492_SNP [dm6]	C	A	1.089e^-4	0.692	DOWNSTREAM CG12126 & 1 other INTERGENIC
3R	10964683	3R_10964683_SNP [dm3] 3R_15138961_SNP [dm6]	T	A	1.090e^-4	0.692	UTR_3_PRIME CG3984 UPSTREAM CG3987 EXON CR45600	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	18138254	3L_18138254_SNP [dm3] 3L_18145154_SNP [dm6]	C	T	1.091e^-4	0.692	UTR_3_PRIME gk
3R	7163818	3R_7163818_SNP [dm3] 3R_11338096_SNP [dm6]	T	A	1.093e^-4	0.692	INTRON pros
2L	2110238	2L_2110238_SNP [dm3] 2L_2110238_SNP [dm6]	T	A	1.104e^-4	0.692	UPSTREAM dpr3 INTERGENIC	TF binding site mE1_TFBS_bab1
2R	15383378	2R_15383378_SNP [dm3] 2R_19495873_SNP [dm6]	G	A	1.104e^-4	0.692	SYNONYMOUS_CODING hpo	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	20129134	2L_20129134_SNP [dm3] 2L_20129134_SNP [dm6]	G	C	1.107e^-4	0.692	INTERGENIC
2R	19360611	2R_19360611_SNP [dm3] 2R_23473088_SNP [dm6]	C	T	1.108e^-4	0.692	SYNONYMOUS_CODING Or59c INTRON CG43795	TF binding site mE1_TFBS_chinmo
3R	21509607	3R_21509607_SNP [dm3] 3R_25683885_SNP [dm6]	G	A	1.110e^-4	0.692	UTR_3_PRIME RpL27 DOWNSTREAM RpL27 & 1 other
2L	16308043	2L_16308043_SNP [dm3] 2L_16308043_SNP [dm6]	C	T	1.111e^-4	0.692	SYNONYMOUS_CODING Syx5 UPSTREAM CG5861	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
X	4682772	X_4682772_SNP [dm3] X_4788739_SNP [dm6]	G	A	1.113e^-4	0.692	INTERGENIC	TF binding site mE1_TFBS_kn
3R	26074182	3R_26074182_SNP [dm3] 3R_30248460_SNP [dm6]	T	C	1.121e^-4	0.692	UPSTREAM tRNA:CR31383 DOWNSTREAM tRNA:CR31023 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	24723192	3R_24723192_SNP [dm3] 3R_28897470_SNP [dm6]	T	C	1.126e^-4	0.692	INTRON Doa
X	5401118	X_5401118_SNP [dm3] X_5507085_SNP [dm6]	T	C	1.127e^-4	0.692	EXON CR45519	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	21945523	X_21945523_SNP [dm3] X_22543687_SNP [dm6]	G	A	1.133e^-4	0.692	SYNONYMOUS_CODING CG17599	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	2414148	2R_2414148_SNP [dm3] 2R_6526643_SNP [dm6]	C	A	1.133e^-4	0.692	INTRON jing	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med mE1_TFBS_cad
2R	10943957	2R_10943957_SNP [dm3] 2R_15056452_SNP [dm6]	T	G	1.134e^-4	0.692	UPSTREAM CG33467 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	3885804	3L_3885804_SNP [dm3] 3L_3885804_SNP [dm6]	G	A	1.142e^-4	0.692	INTERGENIC
2L	18228886	2L_18228886_SNP [dm3] 2L_18228886_SNP [dm6]	C	T	1.144e^-4	0.692	INTRON CG42750
2L	12725277	2L_12725277_SNP [dm3] 2L_12725277_SNP [dm6]	C	T	1.150e^-4	0.692	INTRON MRP
3L	13037146	3L_13037146_INS [dm3] 3L_13044046_INS [dm6]	A	AAAATAGGTATGA...	1.153e^-4	0.692	UTR_3_PRIME RpS4 UPSTREAM Syx13 DOWNSTREAM snoRNA:Psi28S-3327b & 2 others	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	16516318	3R_16516318_SNP [dm3] 3R_20690596_SNP [dm6]	C	T	1.158e^-4	0.692	SYNONYMOUS_CODING Oamb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11037676	3L_11037676_SNP [dm3] 3L_11044576_SNP [dm6]	C	T	1.158e^-4	0.692	INTRON CG43693	TF binding site BDTNP1_TFBS_dl
2L	2110233	2L_2110233_SNP [dm3] 2L_2110233_SNP [dm6]	A	T	1.171e^-4	0.692	UPSTREAM dpr3 INTERGENIC	TF binding site mE1_TFBS_bab1
X	10321581	X_10321581_SNP [dm3] X_10427548_SNP [dm6]	G	T	1.173e^-4	0.692	INTRON CG32683	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	5528470	3L_5528470_SNP [dm3] 3L_5535370_SNP [dm6]	T	G	1.173e^-4	0.692	INTRON CG13285
3L	5528616	3L_5528616_SNP [dm3] 3L_5535516_SNP [dm6]	G	A	1.173e^-4	0.692	SYNONYMOUS_CODING CG13285
2R	18560357	2R_18560357_SNP [dm3] 2R_22672852_SNP [dm6]	A	G	1.174e^-4	0.692	UTR_3_PRIME RYBP DOWNSTREAM CR44761	TF binding site mE1_TFBS_HSA
2L	19604364	2L_19604364_SNP [dm3] 2L_19604364_SNP [dm6]	T	G	1.177e^-4	0.692	INTRON Lar & 1 other
3L	9331838	3L_9331838_SNP [dm3] 3L_9338738_SNP [dm6]	C	T	1.183e^-4	0.692	UPSTREAM PGRP-LC DOWNSTREAM PGRP-LA INTERGENIC
3R	14466691	3R_14466691_SNP [dm3] 3R_18640969_SNP [dm6]	G	A	1.189e^-4	0.692	UTR_5_PRIME CG14301 INTRON qin	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
3L	9481355	3L_9481355_SNP [dm3] 3L_9488255_SNP [dm6]	A	G	1.192e^-4	0.692	UPSTREAM pall INTRON CG32036	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA
3R	18688623	3R_18688623_SNP [dm3] 3R_22862901_SNP [dm6]	C	T	1.200e^-4	0.692	INTERGENIC
X	5597580	X_5597580_SNP [dm3] X_5703547_SNP [dm6]	T	C	1.213e^-4	0.692	SYNONYMOUS_CODING CG4096	TF binding site mE1_TFBS_chinmo
X	15485133	X_15485133_SNP [dm3] X_15591100_SNP [dm6]	A	G	1.219e^-4	0.692	INTRON CG9220
X	20607268	X_20607268_SNP [dm3] X_20736241_SNP [dm6]	G	A	1.221e^-4	0.692	UPSTREAM CG1324 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
X	11937205	X_11937205_SNP [dm3] X_12043172_SNP [dm6]	T	A	1.221e^-4	0.692	UPSTREAM CR43960 & 1 other INTERGENIC
3R	25871623	3R_25871623_SNP [dm3] 3R_30045901_SNP [dm6]	A	G	1.222e^-4	0.692	SYNONYMOUS_CODING RpL32 UTR_5_PRIME RpL32 UPSTREAM CG7943 INTRON RpL32	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2R	19359265	2R_19359265_SNP [dm3] 2R_23471742_SNP [dm6]	C	A	1.222e^-4	0.692	START_GAINED Or59b UTR_5_PRIME Or59b DOWNSTREAM Or59c INTRON CG43795
2L	7594665	2L_7594665_INS [dm3] 2L_7594665_INS [dm6]	A	AG	1.236e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19359537	2R_19359537_SNP [dm3] 2R_23472014_SNP [dm6]	T	A	1.237e^-4	0.692	UPSTREAM Or59b DOWNSTREAM Or59c INTRON CG43795
2L	12708549	2L_12708549_SNP [dm3] 2L_12708549_SNP [dm6]	T	C	1.245e^-4	0.692	UTR_3_PRIME CG6180 UPSTREAM CG15484 DOWNSTREAM CG5787
3R	10273790	3R_10273790_SNP [dm3] 3R_14448068_SNP [dm6]	A	G	1.246e^-4	0.692	INTRON cv-c
2L	14626867	2L_14626867_SNP [dm3] 2L_14626867_SNP [dm6]	T	C	1.248e^-4	0.692	INTRON osp
3R	10782034	3R_10782034_SNP [dm3] 3R_14956312_SNP [dm6]	T	A	1.252e^-4	0.692	INTERGENIC
3L	19506006	3L_19506006_SNP [dm3] 3L_19512906_SNP [dm6]	C	A	1.253e^-4	0.692	INTERGENIC
2L	11644034	2L_11644034_SNP [dm3] 2L_11644034_SNP [dm6]	T	A	1.254e^-4	0.692	DOWNSTREAM CG6614 INTERGENIC
2R	15432969	2R_15432969_SNP [dm3] 2R_19545464_SNP [dm6]	A	T	1.262e^-4	0.692	INTRON sm	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	16313583	2L_16313583_DEL [dm3] 2L_16313583_DEL [dm6]	AAG	A	1.271e^-4	0.692	DOWNSTREAM cact & 1 other INTRON cact	TF binding site BDTNP1_TFBS_dl
3L	2488448	3L_2488448_SNP [dm3] 3L_2488448_SNP [dm6]	G	A	1.274e^-4	0.692	UPSTREAM CG1146 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12978901	X_12978901_SNP [dm3] X_13084868_SNP [dm6]	C	T	1.281e^-4	0.692	INTRON hep
2L	1246969	2L_1246969_SNP [dm3] 2L_1246969_SNP [dm6]	A	T	1.289e^-4	0.692	INTERGENIC
3L	10033829	3L_10033829_SNP [dm3] 3L_10040729_SNP [dm6]	A	C	1.293e^-4	0.692	INTRON dpr6
2R	19366724	2R_19366724_SNP [dm3] 2R_23479201_SNP [dm6]	C	T	1.293e^-4	0.692	INTRON CG43795
2R	19366725	2R_19366725_SNP [dm3] 2R_23479202_SNP [dm6]	T	C	1.293e^-4	0.692	INTRON CG43795
2L	12167357	2L_12167357_SNP [dm3] 2L_12167357_SNP [dm6]	A	C	1.304e^-4	0.692	DOWNSTREAM ZnT33D INTRON CG31760
3L	5148746	3L_5148746_SNP [dm3] 3L_5155646_SNP [dm6]	T	C	1.306e^-4	0.692	DOWNSTREAM Srp54k & 1 other INTERGENIC
3L	3003188	3L_3003188_SNP [dm3] 3L_3003188_SNP [dm6]	G	T	1.308e^-4	0.692	UPSTREAM FMRFaR INTRON FMRFaR
X	10392332	X_10392332_SNP [dm3] X_10498299_SNP [dm6]	C	A	1.312e^-4	0.692	SYNONYMOUS_CODING spri	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12802211	2L_12802211_SNP [dm3] 2L_12802211_SNP [dm6]	A	T	1.317e^-4	0.692	INTERGENIC
3L	20051047	3L_20051047_DEL [dm3] 3L_20057947_DEL [dm6]	GGCATTCGCTATCCACTTAG...	G	1.319e^-4	0.692	DOWNSTREAM sNPF-R INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	14705081	X_14705081_SNP [dm3] X_14811048_SNP [dm6]	G	A	1.319e^-4	0.692	INTRON rut
2L	13698875	2L_13698875_DEL [dm3] 2L_13698875_DEL [dm6]	CAACCAC	C	1.319e^-4	0.692	INTRON CG31814
2R	13905778	2R_13905778_SNP [dm3] 2R_18018273_SNP [dm6]	C	T	1.325e^-4	0.692	UPSTREAM CG5084 INTERGENIC
2L	16571244	2L_16571244_SNP [dm3] 2L_16571244_SNP [dm6]	G	A	1.329e^-4	0.692	INTRON CG42389
3L	8891761	3L_8891761_SNP [dm3] 3L_8898661_SNP [dm6]	A	C	1.330e^-4	0.692	INTRON TrpA1
3R	16236365	3R_16236365_SNP [dm3] 3R_20410643_SNP [dm6]	G	A	1.339e^-4	0.692	INTRON Gfrl
3R	18574100	3R_18574100_SNP [dm3] 3R_22748378_SNP [dm6]	G	A	1.353e^-4	0.692	NON_SYNONYMOUS_CODING CG31139 UPSTREAM CG17141 DOWNSTREAM rumi	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	4859554	X_4859554_SNP [dm3] X_4965521_SNP [dm6]	C	A	1.356e^-4	0.692	INTRON CR44833
3L	5099636	3L_5099636_SNP [dm3] 3L_5099636_SNP [dm6]	T	C	1.357e^-4	0.692	EXON CR34047
2L	14030389	2L_14030389_SNP [dm3] 2L_14030389_SNP [dm6]	T	G	1.361e^-4	0.692	NON_SYNONYMOUS_CODING CG18095
2L	4459891	2L_4459891_SNP [dm3] 2L_4459891_SNP [dm6]	T	C	1.365e^-4	0.692	UTR_5_PRIME CG15435 UPSTREAM mRpL27	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_inv
X	7942104	X_7942104_INS [dm3] X_8048071_INS [dm6]	T	TTGTGGAT	1.370e^-4	0.692	UTR_3_PRIME fs_1_h INTRON fs_1_h	TF binding site BDTNP1_TFBS_dl
3L	6559997	3L_6559997_SNP [dm3] 3L_6566897_SNP [dm6]	G	A	1.380e^-4	0.692	SYNONYMOUS_CODING jv INTRON CG18769
3L	3357922	3L_3357922_SNP [dm3] 3L_3357922_SNP [dm6]	G	A	1.381e^-4	0.692	SPLICE_SITE_REGION kst SYNONYMOUS_CODING kst	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA
2L	15428081	2L_15428081_SNP [dm3] 2L_15428081_SNP [dm6]	G	A	1.386e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
3R	9196350	3R_9196350_SNP [dm3] 3R_13370628_SNP [dm6]	A	G	1.388e^-4	0.692	SYNONYMOUS_CODING Lip3 DOWNSTREAM CheA87a
3R	15512034	3R_15512034_SNP [dm3] 3R_19686312_SNP [dm6]	C	A	1.388e^-4	0.692	UPSTREAM Naam INTRON Naam
3R	8719963	3R_8719963_SNP [dm3] 3R_12894241_SNP [dm6]	C	G	1.393e^-4	0.692	EXON CR33929
3L	9333455	3L_9333455_SNP [dm3] 3L_9340355_SNP [dm6]	G	T	1.396e^-4	0.692	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	2155541	2L_2155541_DEL [dm3] 2L_2155541_DEL [dm6]	TTAG	A	1.401e^-4	0.692	UPSTREAM CG15382 DOWNSTREAM AIF & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16569828	2L_16569828_SNP [dm3] 2L_16569828_SNP [dm6]	T	A	1.408e^-4	0.692	INTRON CG42389
2R	6196914	2R_6196914_SNP [dm3] 2R_10309409_SNP [dm6]	G	A	1.411e^-4	0.692	SYNONYMOUS_CODING JhI-1 UPSTREAM CG12909	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	14859799	2L_14859799_SNP [dm3] 2L_14859799_SNP [dm6]	G	C	1.412e^-4	0.692	INTERGENIC
3R	9538519	3R_9538519_SNP [dm3] 3R_13712797_SNP [dm6]	G	C	1.420e^-4	0.692	UPSTREAM primo-2 & 1 other EXON CR34044	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	12629904	2L_12629904_SNP [dm3] 2L_12629904_SNP [dm6]	T	A	1.428e^-4	0.692	INTRON Ref2
3R	24454828	3R_24454828_SNP [dm3] 3R_28629106_SNP [dm6]	C	G	1.428e^-4	0.692	INTRON CG10011
3L	5783969	3L_5783969_SNP [dm3] 3L_5790869_SNP [dm6]	G	T	1.428e^-4	0.692	SYNONYMOUS_CODING Bre1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	2098912	X_2098912_SNP [dm3] X_2204879_SNP [dm6]	T	C	1.435e^-4	0.692	NON_SYNONYMOUS_CODING Mct1 DOWNSTREAM msta	TF binding site mE1_TFBS_chinmo
3R	8778790	3R_8778790_SNP [dm3] 3R_12953068_SNP [dm6]	T	C	1.439e^-4	0.692	INTRON grsm
3L	9656114	3L_9656114_SNP [dm3] 3L_9663014_SNP [dm6]	G	A	1.441e^-4	0.692	SYNONYMOUS_CODING fry
2R	10943944	2R_10943944_SNP [dm3] 2R_15056439_SNP [dm6]	A	T	1.445e^-4	0.692	UPSTREAM CG33467 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	14496691	2R_14496691_SNP [dm3] 2R_18609186_SNP [dm6]	G	A	1.454e^-4	0.692	INTRON GEFmeso	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	14528611	X_14528611_INS [dm3] X_14634578_INS [dm6]	C	CGTCGAAC	1.457e^-4	0.692	INTRON NetA
2L	3698472	2L_3698472_SNP [dm3] 2L_3698472_SNP [dm6]	C	A	1.460e^-4	0.692	UTR_3_PRIME CG10031 UPSTREAM CG3604 & 1 other
3R	15194742	3R_15194742_SNP [dm3] 3R_19369020_SNP [dm6]	T	C	1.460e^-4	0.692	UTR_3_PRIME Ino80
3R	18573308	3R_18573308_SNP [dm3] 3R_22747586_SNP [dm6]	C	G	1.465e^-4	0.692	UTR_5_PRIME CG17141 DOWNSTREAM HP1c & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Mad BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	16049901	2R_16049901_SNP [dm3] 2R_20162396_SNP [dm6]	T	C	1.466e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	6070834	2L_6070834_INS [dm3] 2L_6070834_INS [dm6]	A	AACGTATTTATAA...	1.468e^-4	0.692	UPSTREAM Kr-h2 & 1 other DOWNSTREAM CG13993 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
X	8927823	X_8927823_SNP [dm3] X_9033790_SNP [dm6]	G	T	1.473e^-4	0.692	INTRON CR43836 & 1 other
3R	9538515	3R_9538515_SNP [dm3] 3R_13712793_SNP [dm6]	A	T	1.473e^-4	0.692	UPSTREAM primo-2 & 1 other EXON CR34044	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	18253007	2L_18253007_SNP [dm3] 2L_18253007_SNP [dm6]	T	C	1.476e^-4	0.692	DOWNSTREAM CG43406 INTRON CG42750
X	5216674	X_5216674_SNP [dm3] X_5322641_SNP [dm6]	T	C	1.478e^-4	0.692	UTR_5_PRIME Rnp4F UPSTREAM Rnp4F	TF binding site BDTNP1_TFBS_dl
X	16952994	X_16952994_SNP [dm3] X_17058961_SNP [dm6]	G	T	1.484e^-4	0.692	INTRON CG45002
2R	16049893	2R_16049893_SNP [dm3] 2R_20162388_SNP [dm6]	C	T	1.489e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	18715884	3R_18715884_SNP [dm3] 3R_22890162_SNP [dm6]	A	G	1.498e^-4	0.692	INTERGENIC
X	8927826	X_8927826_SNP [dm3] X_9033793_SNP [dm6]	G	A	1.501e^-4	0.692	INTRON CR43836 & 1 other
2L	9502531	2L_9502531_SNP [dm3] 2L_9502531_SNP [dm6]	T	A	1.508e^-4	0.692	INTRON CG33298
2L	15253057	2L_15253057_DEL [dm3] 2L_15253057_DEL [dm6]	TTTAT	T	1.508e^-4	0.692	UTR_3_PRIME dao INTRON dao
2L	16602989	2L_16602989_SNP [dm3] 2L_16602989_SNP [dm6]	G	T	1.513e^-4	0.692	INTRON CG42389	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_zfh1
2L	16602991	2L_16602991_SNP [dm3] 2L_16602991_SNP [dm6]	G	A	1.513e^-4	0.692	INTRON CG42389	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_zfh1
X	7815663	X_7815663_DEL [dm3] X_7921630_DEL [dm6]	CCAGTTACGATAGTCCGCTA...	C	1.518e^-4	0.692	UTR_3_PRIME Ykt6 DOWNSTREAM CG10777
3R	6276969	3R_6276969_SNP [dm3] 3R_10451247_SNP [dm6]	C	T	1.520e^-4	0.692	INTERGENIC
3R	8684424	3R_8684424_SNP [dm3] 3R_12858702_SNP [dm6]	A	G	1.529e^-4	0.692	INTRON CG10126
2L	2155501	2L_2155501_SNP [dm3] 2L_2155501_SNP [dm6]	A	G	1.529e^-4	0.692	UPSTREAM CG15382 DOWNSTREAM AIF & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18275232	2L_18275232_SNP [dm3] 2L_18275232_SNP [dm6]	G	A	1.530e^-4	0.692	INTRON CG42750
2L	16304703	2L_16304703_SNP [dm3] 2L_16304703_SNP [dm6]	A	G	1.530e^-4	0.692	SYNONYMOUS_CODING c_2_M
2L	10525890	2L_10525890_SNP [dm3] 2L_10525890_SNP [dm6]	A	C	1.531e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	10321580	X_10321580_SNP [dm3] X_10427547_SNP [dm6]	A	T	1.535e^-4	0.692	INTRON CG32683	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	7934896	3L_7934896_SNP [dm3] 3L_7941796_SNP [dm6]	C	A	1.538e^-4	0.692	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	18380412	2L_18380412_SNP [dm3] 2L_18380412_SNP [dm6]	G	T	1.543e^-4	0.692	DOWNSTREAM CG34171 INTRON Fas3
X	7881418	X_7881418_SNP [dm3] X_7987385_SNP [dm6]	C	A	1.545e^-4	0.692	DOWNSTREAM sn INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	12888396	X_12888396_SNP [dm3] X_12994363_SNP [dm6]	A	G	1.549e^-4	0.692	INTRON rad
2L	16309210	2L_16309210_SNP [dm3] 2L_16309210_SNP [dm6]	C	T	1.550e^-4	0.692	UTR_3_PRIME Syx5 DOWNSTREAM cni
3L	4811716	3L_4811716_SNP [dm3] 3L_4811716_SNP [dm6]	G	T	1.550e^-4	0.692	INTRON Dhc64C
3R	22876886	3R_22876886_DEL [dm3] 3R_27051164_DEL [dm6]	TTC	CA	1.551e^-4	0.692	DOWNSTREAM TwdlT INTRON RYa-R
X	12205990	X_12205990_SNP [dm3] X_12311957_SNP [dm6]	A	T	1.551e^-4	0.692	INTRON Ten-a
X	13676350	X_13676350_SNP [dm3] X_13782317_SNP [dm6]	T	C	1.554e^-4	0.692	UPSTREAM CG11103 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	18303913	2L_18303913_SNP [dm3] 2L_18303913_SNP [dm6]	G	A	1.554e^-4	0.692	INTERGENIC
2L	18283254	2L_18283254_SNP [dm3] 2L_18283254_SNP [dm6]	C	G	1.556e^-4	0.692	INTERGENIC
2R	19356809	2R_19356809_SNP [dm3] 2R_23469286_SNP [dm6]	T	G	1.562e^-4	0.692	DOWNSTREAM Or59b INTRON CG43795
3L	10505359	3L_10505359_SNP [dm3] 3L_10512259_SNP [dm6]	T	C	1.565e^-4	0.692	INTRON A2bp1
3R	3124238	3R_3124238_SNP [dm3] 3R_7298516_SNP [dm6]	C	T	1.569e^-4	0.692	INTRON rn
X	4678974	X_4678974_SNP [dm3] X_4784941_SNP [dm6]	G	A	1.576e^-4	0.692	SYNONYMOUS_CODING CG6978	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	2917908	3R_2917908_SNP [dm3] 3R_7092186_SNP [dm6]	A	T	1.579e^-4	0.692	DOWNSTREAM CR43685 INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	5216199	X_5216199_SNP [dm3] X_5322166_SNP [dm6]	C	A	1.584e^-4	0.692	SYNONYMOUS_CODING Rnp4F	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
3R	5942220	3R_5942220_SNP [dm3] 3R_10116498_SNP [dm6]	C	T	1.596e^-4	0.692	INTRON CG3940
2R	12229846	2R_12229846_SNP [dm3] 2R_16342341_SNP [dm6]	C	A	1.603e^-4	0.692	SYNONYMOUS_CODING CG7997
3L	868285	3L_868285_SNP [dm3] 3L_868285_SNP [dm6]	T	C	1.607e^-4	0.692	SYNONYMOUS_CODING CG12502	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	15160713	2L_15160713_SNP [dm3] 2L_15160713_SNP [dm6]	A	G	1.613e^-4	0.692	UPSTREAM CR44771 EXON CR44770
3L	12613399	3L_12613399_SNP [dm3] 3L_12620299_SNP [dm6]	C	T	1.621e^-4	0.692	SYNONYMOUS_CODING caup	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	20483962	X_20483962_SNP [dm3] X_20612935_SNP [dm6]	A	G	1.625e^-4	0.692	INTRON RunxA	TF binding site mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA
3L	1736908	3L_1736908_SNP [dm3] 3L_1736908_SNP [dm6]	A	G	1.635e^-4	0.692	SPLICE_SITE_REGION CG18173 SYNONYMOUS_CODING CG18173	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	2636926	2L_2636926_SNP [dm3] 2L_2636926_SNP [dm6]	A	G	1.636e^-4	0.692	INTERGENIC
3L	12357323	3L_12357323_SNP [dm3] 3L_12364223_SNP [dm6]	G	T	1.649e^-4	0.692	INTERGENIC
4	1141898	4_1141898_SNP [dm3] 4_1121272_SNP [dm6]	C	A	1.660e^-4	0.692	INTRON Cals	transposable element FlyBase
3R	17211229	3R_17211229_SNP [dm3] 3R_21385507_SNP [dm6]	A	G	1.660e^-4	0.692	INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
3R	15190705	3R_15190705_SNP [dm3] 3R_19364983_SNP [dm6]	C	T	1.665e^-4	0.692	INTERGENIC
3R	16493115	3R_16493115_SNP [dm3] 3R_20667393_SNP [dm6]	C	A	1.666e^-4	0.692	INTERGENIC
3R	24785265	3R_24785265_SNP [dm3] 3R_28959543_SNP [dm6]	G	A	1.669e^-4	0.692	INTRON CG14521
2L	12713639	2L_12713639_SNP [dm3] 2L_12713639_SNP [dm6]	A	T	1.673e^-4	0.692	UPSTREAM CG5787 DOWNSTREAM CG5792 INTRON CG5792
3R	6010102	3R_6010102_SNP [dm3] 3R_10184380_SNP [dm6]	T	A	1.676e^-4	0.692	INTRON CG12814	TF binding site mE1_TFBS_cad
3R	3109228	3R_3109228_SNP [dm3] 3R_7283506_SNP [dm6]	C	T	1.678e^-4	0.692	INTRON rn
3R	26076114	3R_26076114_SNP [dm3] 3R_30250392_SNP [dm6]	G	T	1.678e^-4	0.692	SYNONYMOUS_CODING CG34299 UPSTREAM CG9682 DOWNSTREAM CG34299
X	6483242	X_6483242_SNP [dm3] X_6589209_SNP [dm6]	A	C	1.684e^-4	0.692	UPSTREAM CG17717 DOWNSTREAM CG34417 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	4340960	2L_4340960_SNP [dm3] 2L_4340960_SNP [dm6]	C	T	1.690e^-4	0.692	INTRON Atet
2L	11147366	2L_11147366_SNP [dm3] 2L_11147366_SNP [dm6]	C	T	1.691e^-4	0.692	INTRON Gyc32E
2L	20488911	2L_20488911_SNP [dm3] 2L_20488911_SNP [dm6]	C	G	1.694e^-4	0.692	UPSTREAM CR45359 DOWNSTREAM CR45360 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	18465328	X_18465328_SNP [dm3] X_18571295_SNP [dm6]	A	G	1.696e^-4	0.692	UTR_3_PRIME Bx
3R	24655075	3R_24655075_SNP [dm3] 3R_28829353_SNP [dm6]	A	G	1.699e^-4	0.692	INTRON WASp
3R	15852004	3R_15852004_SNP [dm3] 3R_20026282_SNP [dm6]	T	A	1.700e^-4	0.692	UTR_3_PRIME psidin DOWNSTREAM CG4424
2R	17597884	2R_17597884_SNP [dm3] 2R_21710379_SNP [dm6]	T	C	1.702e^-4	0.692	SYNONYMOUS_CODING CG30403 UPSTREAM CR44749 INTRON HmgD	TF binding site BDTNP1_TFBS_dl
3R	14588585	3R_14588585_SNP [dm3] 3R_18762863_SNP [dm6]	G	A	1.703e^-4	0.692	INTRON CG7720
3R	921448	3R_921448_SNP [dm3] 3R_5095726_SNP [dm6]	A	G	1.704e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_HSA
X	6825863	X_6825863_SNP [dm3] X_6931830_SNP [dm6]	T	C	1.704e^-4	0.692	INTRON CG14431
3L	3496807	3L_3496807_SNP [dm3] 3L_3496807_SNP [dm6]	G	C	1.704e^-4	0.692	INTRON CG42324
2L	3250350	2L_3250350_SNP [dm3] 2L_3250350_SNP [dm6]	T	A	1.706e^-4	0.692	INTERGENIC
2L	11139217	2L_11139217_SNP [dm3] 2L_11139217_SNP [dm6]	T	C	1.706e^-4	0.692	DOWNSTREAM hgo INTRON Gyc32E
2R	18905611	2R_18905611_SNP [dm3] 2R_23018088_SNP [dm6]	C	A	1.713e^-4	0.692	INTRON twi & 1 other
3R	25782026	3R_25782026_SNP [dm3] 3R_29956304_SNP [dm6]	T	C	1.714e^-4	0.692	INTRON TkR99D
3L	21398748	3L_21398748_SNP [dm3] 3L_21405648_SNP [dm6]	T	A	1.717e^-4	0.692	INTRON rgn & 1 other
3L	18030714	3L_18030714_SNP [dm3] 3L_18037614_SNP [dm6]	T	G	1.718e^-4	0.692	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	9333236	3L_9333236_SNP [dm3] 3L_9340136_SNP [dm6]	T	C	1.719e^-4	0.692	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	10610777	2R_10610777_SNP [dm3] 2R_14723272_SNP [dm6]	T	A	1.720e^-4	0.692	INTERGENIC
3L	8994010	3L_8994010_SNP [dm3] 3L_9000910_SNP [dm6]	A	G	1.721e^-4	0.692	SYNONYMOUS_CODING CG5087	TF binding site BDTNP1_TFBS_da
X	6099256	X_6099256_DEL [dm3] X_6205223_DEL [dm6]	TT	T	1.729e^-4	0.692	INTERGENIC
X	1834494	X_1834494_SNP [dm3] X_1940461_SNP [dm6]	C	T	1.731e^-4	0.692	SYNONYMOUS_CODING CG3587 UPSTREAM CG3857	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_sens
X	4678905	X_4678905_SNP [dm3] X_4784872_SNP [dm6]	T	C	1.738e^-4	0.692	SYNONYMOUS_CODING CG6978	TF binding site mE1_TFBS_chinmo
2R	9612683	2R_9612683_SNP [dm3] 2R_13725178_SNP [dm6]	G	A	1.738e^-4	0.692	INTRON fas	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	26074108	3R_26074108_SNP [dm3] 3R_30248386_SNP [dm6]	A	G	1.741e^-4	0.692	UPSTREAM tRNA:CR31383 DOWNSTREAM tRNA:CR31023 INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	15422282	X_15422282_SNP [dm3] X_15528249_SNP [dm6]	T	C	1.742e^-4	0.692	INTRON Ac13E
2L	16299763	2L_16299763_SNP [dm3] 2L_16299763_SNP [dm6]	C	A	1.745e^-4	0.692	UTR_5_PRIME heix UPSTREAM CG17328	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2R	8502350	2R_8502350_SNP [dm3] 2R_12614845_SNP [dm6]	G	A	1.751e^-4	0.692	UPSTREAM Galphaq INTRON Galphaq & 1 other
X	12478862	X_12478862_SNP [dm3] X_12584829_SNP [dm6]	T	A	1.761e^-4	0.692	UTR_3_PRIME LIMK1 DOWNSTREAM LIMK1
2R	12792310	2R_12792310_SNP [dm3] 2R_16904805_SNP [dm6]	G	C	1.762e^-4	0.692	INTERGENIC
2L	16308346	2L_16308346_SNP [dm3] 2L_16308346_SNP [dm6]	G	T	1.764e^-4	0.692	DOWNSTREAM cni INTRON Syx5	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3L	12357296	3L_12357296_DEL [dm3] 3L_12364196_DEL [dm6]	GGACAC	G	1.770e^-4	0.692	INTERGENIC
3L	11298673	3L_11298673_SNP [dm3] 3L_11305573_SNP [dm6]	G	A	1.773e^-4	0.692	INTERGENIC
3L	16669409	3L_16669409_DEL [dm3] 3L_16676309_DEL [dm6]	AA	A	1.775e^-4	0.692	DOWNSTREAM Lasp & 1 other INTERGENIC	TF binding site mE1_TFBS_inv
2R	18563747	2R_18563747_SNP [dm3] 2R_22676242_SNP [dm6]	G	C	1.778e^-4	0.692	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	4685380	2L_4685380_SNP [dm3] 2L_4685380_SNP [dm6]	A	G	1.780e^-4	0.692	SYNONYMOUS_CODING CG11929 UPSTREAM Bsg25A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	14711236	X_14711236_SNP [dm3] X_14817203_SNP [dm6]	C	T	1.791e^-4	0.692	INTRON rut
3L	9333314	3L_9333314_SNP [dm3] 3L_9340214_SNP [dm6]	T	A	1.797e^-4	0.692	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	12300955	2L_12300955_SNP [dm3] 2L_12300955_SNP [dm6]	C	T	1.798e^-4	0.692	INTRON aret
4	1227868	4_1227868_SNP [dm3] 4_1224142_SNP [dm6]	T	C	1.800e^-4	0.692	UTR_3_PRIME Mitf DOWNSTREAM Mitf & 1 other
3L	15253107	3L_15253107_SNP [dm3] 3L_15260007_SNP [dm6]	C	T	1.810e^-4	0.692	INTERGENIC	TF binding site mE1_TFBS_inv
3L	12357361	3L_12357361_SNP [dm3] 3L_12364261_SNP [dm6]	T	G	1.818e^-4	0.692	INTERGENIC
2L	14453882	2L_14453882_SNP [dm3] 2L_14453882_SNP [dm6]	A	G	1.818e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	8684389	3R_8684389_SNP [dm3] 3R_12858667_SNP [dm6]	T	A	1.836e^-4	0.692	INTRON CG10126
3R	22200399	3R_22200399_INS [dm3] 3R_26374677_INS [dm6]	A	AT	1.842e^-4	0.692	INTERGENIC
3L	21775757	3L_21775757_SNP [dm3] 3L_21782657_SNP [dm6]	G	A	1.842e^-4	0.692	INTERGENIC
3R	2991001	3R_2991001_SNP [dm3] 3R_7165279_SNP [dm6]	G	A	1.844e^-4	0.692	INTRON sas
2R	2913179	2R_2913179_SNP [dm3] 2R_7025674_SNP [dm6]	A	C	1.848e^-4	0.692	INTRON Tsp42Ef	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	14428238	2R_14428238_DEL [dm3] 2R_18540733_DEL [dm6]	GAGG	T	1.848e^-4	0.692	INTRON Rgk2	TF binding site mE1_TFBS_chinmo
2L	18298775	2L_18298775_SNP [dm3] 2L_18298775_SNP [dm6]	T	G	1.850e^-4	0.692	INTERGENIC	TF binding site mE1_TFBS_inv
3L	7707756	3L_7707756_SNP [dm3] 3L_7714656_SNP [dm6]	C	T	1.853e^-4	0.692	INTRON CG32373 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	14262452	X_14262452_SNP [dm3] X_14368419_SNP [dm6]	T	A	1.857e^-4	0.692	INTRON dpr8
2L	10506621	2L_10506621_SNP [dm3] 2L_10506621_SNP [dm6]	G	A	1.865e^-4	0.692	UTR_5_PRIME Myo31DF UPSTREAM CG6094 INTRON Myo31DF EXON CR44224	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	16309450	2L_16309450_SNP [dm3] 2L_16309450_SNP [dm6]	A	C	1.866e^-4	0.692	UTR_3_PRIME cni DOWNSTREAM cni & 1 other
X	7433376	X_7433376_INS [dm3] X_7539343_INS [dm6]	G	GG	1.870e^-4	0.692	INTRON CG32719
2R	15362426	2R_15362426_SNP [dm3] 2R_19474921_SNP [dm6]	C	T	1.871e^-4	0.692	INTRON par-1
3L	9333249	3L_9333249_SNP [dm3] 3L_9340149_SNP [dm6]	T	C	1.876e^-4	0.692	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	10678937	2L_10678937_SNP [dm3] 2L_10678937_SNP [dm6]	C	T	1.878e^-4	0.692	NON_SYNONYMOUS_CODING CG17104
X	592676	X_592676_INS [dm3] X_698643_INS [dm6]	C	CTT	1.879e^-4	0.692	INTRON sdk
3R	10376534	3R_10376534_SNP [dm3] 3R_14550812_SNP [dm6]	G	T	1.884e^-4	0.692	INTRON Pde6
3R	22755301	3R_22755301_SNP [dm3] 3R_26929579_SNP [dm6]	G	A	1.885e^-4	0.692	INTRON sda
2L	4133923	2L_4133923_SNP [dm3] 2L_4133923_SNP [dm6]	A	G	1.893e^-4	0.692	INTERGENIC
X	18319844	X_18319844_SNP [dm3] X_18425811_SNP [dm6]	T	A	1.898e^-4	0.692	INTRON CG42323
3R	25238173	3R_25238173_SNP [dm3] 3R_29412451_SNP [dm6]	T	C	1.902e^-4	0.692	INTRON Ptp99A
3L	18038634	3L_18038634_SNP [dm3] 3L_18045534_SNP [dm6]	G	T	1.902e^-4	0.692	INTRON Eip75B
2R	7960063	2R_7960063_SNP [dm3] 2R_12072558_SNP [dm6]	G	A	1.912e^-4	0.692	INTRON CG8888
X	14705109	X_14705109_SNP [dm3] X_14811076_SNP [dm6]	G	A	1.913e^-4	0.692	INTRON rut
2L	18233935	2L_18233935_SNP [dm3] 2L_18233935_SNP [dm6]	C	T	1.916e^-4	0.692	INTRON CG42750
2L	18238137	2L_18238137_SNP [dm3] 2L_18238137_SNP [dm6]	G	C	1.916e^-4	0.692	INTRON CG42750
3R	10270512	3R_10270512_SNP [dm3] 3R_14444790_SNP [dm6]	T	A	1.916e^-4	0.692	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18302492	2L_18302492_SNP [dm3] 2L_18302492_SNP [dm6]	T	C	1.920e^-4	0.692	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	11455701	3R_11455701_SNP [dm3] 3R_15629979_SNP [dm6]	T	C	1.922e^-4	0.692	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	16633932	2L_16633932_SNP [dm3] 2L_16633932_SNP [dm6]	T	C	1.934e^-4	0.692	INTRON CG42389
2L	11486194	2L_11486194_SNP [dm3] 2L_11486194_SNP [dm6]	C	T	1.934e^-4	0.692	START_GAINED sala UTR_5_PRIME sala UTR_3_PRIME CG43355 DOWNSTREAM CG43355	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	4892852	2L_4892852_SNP [dm3] 2L_4892852_SNP [dm6]	G	A	1.938e^-4	0.692	INTRON CG3036	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA
X	21455313	X_21455313_SNP [dm3] X_21584286_SNP [dm6]	C	A	1.938e^-4	0.692	EXON CR44711
3L	3714390	3L_3714390_SNP [dm3] 3L_3714390_SNP [dm6]	G	A	1.938e^-4	0.692	SYNONYMOUS_CODING CG43089 DOWNSTREAM CG32264
3L	2882473	3L_2882473_SNP [dm3] 3L_2882473_SNP [dm6]	A	G	1.939e^-4	0.692	UPSTREAM CR44531 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Trl
2R	18083282	2R_18083282_SNP [dm3] 2R_22195777_SNP [dm6]	A	T	1.941e^-4	0.692	INTRON Swim
2L	4487072	2L_4487072_SNP [dm3] 2L_4487072_SNP [dm6]	G	T	1.944e^-4	0.692	SYNONYMOUS_CODING dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	16660110	X_16660110_SNP [dm3] X_16766077_SNP [dm6]	G	T	1.944e^-4	0.692	INTRON if
3L	8580317	3L_8580317_SNP [dm3] 3L_8587217_SNP [dm6]	T	A	1.950e^-4	0.692	INTRON CG43078	TF binding site mE1_TFBS_chinmo
X	7432761	X_7432761_SNP [dm3] X_7538728_SNP [dm6]	G	A	1.956e^-4	0.692	INTRON CG32719	TF binding site mE1_TFBS_inv
3R	5992683	3R_5992683_SNP [dm3] 3R_10166961_SNP [dm6]	C	T	1.956e^-4	0.692	INTRON Best1
3R	3138225	3R_3138225_SNP [dm3] 3R_7312503_SNP [dm6]	C	T	1.961e^-4	0.692	EXON CR44334
3R	25157194	3R_25157194_SNP [dm3] 3R_29331472_SNP [dm6]	A	G	1.963e^-4	0.692	INTERGENIC
X	12205899	X_12205899_SNP [dm3] X_12311866_SNP [dm6]	T	C	1.966e^-4	0.692	INTRON Ten-a
2L	11137466	2L_11137466_SNP [dm3] 2L_11137466_SNP [dm6]	C	T	1.968e^-4	0.692	SYNONYMOUS_CODING hgo
2L	15477604	2L_15477604_SNP [dm3] 2L_15477604_SNP [dm6]	C	T	1.972e^-4	0.692	SYNONYMOUS_CODING sna	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	3132280	3R_3132280_SNP [dm3] 3R_7306558_SNP [dm6]	A	T	1.973e^-4	0.692	INTRON rn
3R	23710467	3R_23710467_SNP [dm3] 3R_27884745_SNP [dm6]	G	A	1.973e^-4	0.692	INTRON CG34353
X	18418426	X_18418426_SNP [dm3] X_18524393_SNP [dm6]	T	A	1.973e^-4	0.692	INTRON Bx	TF binding site BDTNP1_TFBS_dl mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3R	23517865	3R_23517865_INS [dm3] 3R_27692143_INS [dm6]	G	GG	1.974e^-4	0.692	UTR_3_PRIME CG12880	TF binding site mE1_TFBS_chinmo
3R	8713645	3R_8713645_SNP [dm3] 3R_12887923_SNP [dm6]	A	G	1.975e^-4	0.692	INTERGENIC
2L	16303408	2L_16303408_SNP [dm3] 2L_16303408_SNP [dm6]	G	C	1.997e^-4	0.693	SYNONYMOUS_CODING c_2_M UPSTREAM CG5869	TF binding site BDTNP1_TFBS_dl
2L	18381836	2L_18381836_SNP [dm3] 2L_18381836_SNP [dm6]	C	T	1.998e^-4	0.693	INTRON Fas3
3R	10376681	3R_10376681_SNP [dm3] 3R_14550959_SNP [dm6]	G	A	2.001e^-4	0.693	INTRON Pde6
3R	24696635	3R_24696635_SNP [dm3] 3R_28870913_SNP [dm6]	A	T	2.002e^-4	0.693	UTR_3_PRIME CG33203 DOWNSTREAM spg
3L	10878993	3L_10878993_SNP [dm3] 3L_10885893_SNP [dm6]	T	C	2.003e^-4	0.693	INTRON CG6404	TF binding site BDTNP1_TFBS_dl
3R	14026101	3R_14026101_SNP [dm3] 3R_18200379_SNP [dm6]	A	T	2.004e^-4	0.693	START_GAINED CG7985 UTR_5_PRIME CG7985 UPSTREAM Ssdp INTRON CG7985	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu
2R	12547266	2R_12547266_DEL [dm3] 2R_16659761_DEL [dm6]	CC	C	2.008e^-4	0.693	UPSTREAM Picot INTRON Picot
3R	22908752	3R_22908752_SNP [dm3] 3R_27083030_SNP [dm6]	G	A	2.015e^-4	0.693	DOWNSTREAM Cpr97Ea & 1 other INTERGENIC	TF binding site mE1_TFBS_D
3R	2956664	3R_2956664_SNP [dm3] 3R_7130942_SNP [dm6]	G	C	2.015e^-4	0.693	UPSTREAM CG31493 DOWNSTREAM tRNA:CR31491 & 1 other INTERGENIC
2R	19374793	2R_19374793_SNP [dm3] 2R_23487270_SNP [dm6]	G	C	2.015e^-4	0.693	INTRON CG43795
3L	18213458	3L_18213458_SNP [dm3] 3L_18220358_SNP [dm6]	G	T	2.021e^-4	0.693	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_zfh1
2R	3800077	2R_3800077_SNP [dm3] 2R_7912572_SNP [dm6]	T	A	2.024e^-4	0.693	INTRON CG30377
2L	18223559	2L_18223559_SNP [dm3] 2L_18223559_SNP [dm6]	T	A	2.029e^-4	0.693	INTRON CG42750
3R	3130866	3R_3130866_DEL [dm3] 3R_7305144_DEL [dm6]	AATAC	A	2.032e^-4	0.693	DOWNSTREAM CG42544 INTRON rn	TF binding site mE1_TFBS_cad
2L	11875898	2L_11875898_SNP [dm3] 2L_11875898_SNP [dm6]	C	T	2.033e^-4	0.693	INTRON Pde1c
3R	13794364	3R_13794364_SNP [dm3] 3R_17968642_SNP [dm6]	G	A	2.035e^-4	0.693	INTRON cpo
X	7433393	X_7433393_SNP [dm3] X_7539360_SNP [dm6]	C	A	2.041e^-4	0.693	INTRON CG32719
3L	2033506	3L_2033506_SNP [dm3] 3L_2033506_SNP [dm6]	C	A	2.050e^-4	0.693	INTERGENIC
X	14071021	X_14071021_SNP [dm3] X_14176988_SNP [dm6]	G	A	2.051e^-4	0.693	SYNONYMOUS_CODING CG11581	TF binding site mE1_TFBS_chinmo
2L	18429539	2L_18429539_SNP [dm3] 2L_18429539_SNP [dm6]	T	G	2.054e^-4	0.693	INTERGENIC
X	14703679	X_14703679_SNP [dm3] X_14809646_SNP [dm6]	T	A	2.060e^-4	0.693	INTRON rut
4	1214600	4_1214600_SNP [dm3] 4_1193974_SNP [dm6]	T	C	2.071e^-4	0.693	DOWNSTREAM CG33521 INTRON PIP4K
2L	16311924	2L_16311924_SNP [dm3] 2L_16311924_SNP [dm6]	G	T	2.072e^-4	0.693	SYNONYMOUS_CODING fzy	TF binding site mE1_TFBS_sens
X	16415162	X_16415162_SNP [dm3] X_16521129_SNP [dm6]	G	A	2.075e^-4	0.693	INTRON para
3R	10782033	3R_10782033_SNP [dm3] 3R_14956311_SNP [dm6]	A	T	2.077e^-4	0.693	INTERGENIC
2L	18277503	2L_18277503_SNP [dm3] 2L_18277503_SNP [dm6]	T	G	2.077e^-4	0.693	INTERGENIC
2L	2069851	2L_2069851_SNP [dm3] 2L_2069851_SNP [dm6]	A	T	2.086e^-4	0.693	INTRON dpr3
2L	1687203	2L_1687203_SNP [dm3] 2L_1687203_SNP [dm6]	G	T	2.088e^-4	0.693	INTRON chinmo	TF binding site mE1_TFBS_HSA
3L	11062817	3L_11062817_SNP [dm3] 3L_11069717_SNP [dm6]	T	C	2.094e^-4	0.693	NON_SYNONYMOUS_CODING CG6310 UPSTREAM Mocs1 DOWNSTREAM SuUR & 1 other
2L	18230580	2L_18230580_SNP [dm3] 2L_18230580_SNP [dm6]	T	A	2.094e^-4	0.693	INTRON CG42750	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
X	15045379	X_15045379_SNP [dm3] X_15151346_SNP [dm6]	G	A	2.097e^-4	0.693	INTRON CG9095
3R	26547432	3R_26547432_SNP [dm3] 3R_30721710_SNP [dm6]	C	A	2.103e^-4	0.693	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18232553	2L_18232553_SNP [dm3] 2L_18232553_SNP [dm6]	C	A	2.103e^-4	0.693	INTRON CG42750
3L	22235669	3L_22235669_DEL [dm3] 3L_22242569_DEL [dm6]	CCTGAGC	C	2.108e^-4	0.693	CODON_DELETION olf413	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	13797701	X_13797701_INS [dm3] X_13903668_INS [dm6]	A	AGCA	2.110e^-4	0.693	INTRON mamo
2R	8499852	2R_8499852_SNP [dm3] 2R_12612347_SNP [dm6]	G	T	2.111e^-4	0.693	UPSTREAM Galphaq & 1 other DOWNSTREAM Amph INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk
2L	2712044	2L_2712044_SNP [dm3] 2L_2712044_SNP [dm6]	G	T	2.119e^-4	0.695	SYNONYMOUS_CODING CG31690	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	16740421	3R_16740421_INS [dm3] 3R_20914699_INS [dm6]	C	AGT	2.127e^-4	0.696	INTRON CG31191 & 1 other	TF binding site BDTNP1_TFBS_twi
3L	1136136	3L_1136136_SNP [dm3] 3L_1136136_SNP [dm6]	G	A	2.136e^-4	0.698	INTERGENIC	TF binding site mE1_TFBS_inv
3R	8801087	3R_8801087_SNP [dm3] 3R_12975365_SNP [dm6]	A	G	2.152e^-4	0.702	UPSTREAM CG7381 INTRON CG7381
2R	19357982	2R_19357982_SNP [dm3] 2R_23470459_SNP [dm6]	G	A	2.162e^-4	0.702	SYNONYMOUS_CODING Or59b INTRON CG43795
3L	12357220	3L_12357220_SNP [dm3] 3L_12364120_SNP [dm6]	T	C	2.164e^-4	0.702	INTERGENIC
2R	8499947	2R_8499947_SNP [dm3] 2R_12612442_SNP [dm6]	T	C	2.165e^-4	0.702	UPSTREAM Galphaq & 1 other DOWNSTREAM Amph INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk
3R	15849024	3R_15849024_SNP [dm3] 3R_20023302_SNP [dm6]	T	C	2.167e^-4	0.702	INTRON psidin	TF binding site mE1_TFBS_cad
X	16660048	X_16660048_DEL [dm3] X_16766015_DEL [dm6]	AGCGTTA	A	2.172e^-4	0.702	INTRON if
3R	14026100	3R_14026100_SNP [dm3] 3R_18200378_SNP [dm6]	A	G	2.181e^-4	0.704	UTR_5_PRIME CG7985 UPSTREAM Ssdp INTRON CG7985	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu
2L	6726752	2L_6726752_SNP [dm3] 2L_6726752_SNP [dm6]	T	C	2.188e^-4	0.705	INTRON Liprin-alpha
2L	20970154	2L_20970154_SNP [dm3] 2L_20970154_SNP [dm6]	A	G	2.204e^-4	0.707	INTRON CG42238	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
X	12088684	X_12088684_SNP [dm3] X_12194651_SNP [dm6]	G	T	2.204e^-4	0.707	INTRON Ten-a
2R	14428243	2R_14428243_SNP [dm3] 2R_18540738_SNP [dm6]	G	A	2.208e^-4	0.707	INTRON Rgk2	TF binding site mE1_TFBS_chinmo
2L	18235380	2L_18235380_SNP [dm3] 2L_18235380_SNP [dm6]	T	C	2.208e^-4	0.707	INTRON CG42750	TF binding site BDTNP1_TFBS_prd
2L	13714703	2L_13714703_SNP [dm3] 2L_13714703_SNP [dm6]	G	A	2.222e^-4	0.707	INTRON CG31814
X	19881288	X_19881288_SNP [dm3] X_19987255_SNP [dm6]	A	T	2.223e^-4	0.707	INTERGENIC
2R	10864025	2R_10864025_SNP [dm3] 2R_14976520_SNP [dm6]	G	C	2.234e^-4	0.707	INTRON ckn	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
X	16952594	X_16952594_SNP [dm3] X_17058561_SNP [dm6]	A	G	2.237e^-4	0.707	INTRON CG45002
3R	23221212	3R_23221212_SNP [dm3] 3R_27395490_SNP [dm6]	C	A	2.239e^-4	0.707	INTRON side
3R	7163333	3R_7163333_SNP [dm3] 3R_11337611_SNP [dm6]	C	T	2.246e^-4	0.707	INTRON pros
3R	10280953	3R_10280953_SNP [dm3] 3R_14455231_SNP [dm6]	C	T	2.248e^-4	0.707	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	12800357	2L_12800357_SNP [dm3] 2L_12800357_SNP [dm6]	A	G	2.259e^-4	0.707	INTERGENIC
3L	20527036	3L_20527036_MNP [dm3] 3L_20533936_MNP [dm6]	TGA	GTT	2.261e^-4	0.707	UPSTREAM CG13250 INTRON Rcd2 & 1 other
3L	20527039	3L_20527039_DEL [dm3] 3L_20533939_DEL [dm6]	AT	A	2.261e^-4	0.707	UPSTREAM CG13250 INTRON Rcd2 & 1 other
2L	12167351	2L_12167351_SNP [dm3] 2L_12167351_SNP [dm6]	G	A	2.270e^-4	0.707	DOWNSTREAM ZnT33D INTRON CG31760
3R	15850066	3R_15850066_SNP [dm3] 3R_20024344_SNP [dm6]	T	C	2.270e^-4	0.707	INTRON psidin	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
X	18992689	X_18992689_SNP [dm3] X_19098656_SNP [dm6]	C	T	2.270e^-4	0.707	INTERGENIC
2L	7717067	2L_7717067_SNP [dm3] 2L_7717067_SNP [dm6]	G	A	2.273e^-4	0.707	SYNONYMOUS_CODING CG13793 UPSTREAM CG33296
X	16952985	X_16952985_SNP [dm3] X_17058952_SNP [dm6]	C	A	2.273e^-4	0.707	INTRON CG45002
2R	6090509	2R_6090509_SNP [dm3] 2R_10203004_SNP [dm6]	A	C	2.278e^-4	0.707	DOWNSTREAM Hr46 INTERGENIC
X	20374207	X_20374207_SNP [dm3] X_20503180_SNP [dm6]	C	T	2.279e^-4	0.707	INTRON RhoGAP19D
2R	1375589	2R_1375589_SNP [dm3] 2R_5488084_SNP [dm6]	C	T	2.290e^-4	0.707	INTRON CG30440	transposable element FlyBase
X	12205927	X_12205927_SNP [dm3] X_12311894_SNP [dm6]	G	C	2.291e^-4	0.707	INTRON Ten-a
X	15485135	X_15485135_SNP [dm3] X_15591102_SNP [dm6]	T	A	2.293e^-4	0.707	INTRON CG9220
X	14705293	X_14705293_INS [dm3] X_14811260_INS [dm6]	A	AA	2.299e^-4	0.707	INTRON rut
2L	16307255	2L_16307255_SNP [dm3] 2L_16307255_SNP [dm6]	G	A	2.306e^-4	0.707	START_GAINED CG5861 UTR_5_PRIME CG5861 UPSTREAM Syx5	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA
2L	2155548	2L_2155548_SNP [dm3] 2L_2155548_SNP [dm6]	G	A	2.307e^-4	0.707	UPSTREAM CG15382 DOWNSTREAM AIF & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	2366662	X_2366662_SNP [dm3] X_2472629_SNP [dm6]	G	A	2.307e^-4	0.707	INTRON trol
3L	9333248	3L_9333248_SNP [dm3] 3L_9340148_SNP [dm6]	A	C	2.310e^-4	0.707	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	24044367	3R_24044367_SNP [dm3] 3R_28218645_SNP [dm6]	G	A	2.317e^-4	0.707	INTRON CG34354
4	879864	4_879864_SNP [dm3] 4_859238_SNP [dm6]	T	A	2.318e^-4	0.707	INTRON CG11148	transposable element FlyBase
3R	26062174	3R_26062174_SNP [dm3] 3R_30236452_SNP [dm6]	A	C	2.320e^-4	0.707	DOWNSTREAM CG43448 INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	16064557	2R_16064557_SNP [dm3] 2R_20177052_SNP [dm6]	C	T	2.333e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	15181482	3R_15181482_SNP [dm3] 3R_19355760_SNP [dm6]	G	A	2.335e^-4	0.707	DOWNSTREAM CG43203 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2R	12229819	2R_12229819_SNP [dm3] 2R_16342314_SNP [dm6]	T	C	2.339e^-4	0.707	SYNONYMOUS_CODING CG7997
3R	18573378	3R_18573378_SNP [dm3] 3R_22747656_SNP [dm6]	C	A	2.340e^-4	0.707	UPSTREAM CG17141 DOWNSTREAM CG31139 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	10205854	X_10205854_SNP [dm3] X_10311821_SNP [dm6]	T	C	2.341e^-4	0.707	INTRON alpha-Man-I
2R	16031970	2R_16031970_SNP [dm3] 2R_20144465_SNP [dm6]	C	G	2.346e^-4	0.707	INTERGENIC
X	10321063	X_10321063_SNP [dm3] X_10427030_SNP [dm6]	G	A	2.351e^-4	0.707	INTRON CG32683
3L	9333307	3L_9333307_SNP [dm3] 3L_9340207_SNP [dm6]	G	A	2.363e^-4	0.707	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	8674732	3R_8674732_SNP [dm3] 3R_12849010_SNP [dm6]	T	G	2.368e^-4	0.707	UPSTREAM beat-Va DOWNSTREAM CR45587 INTERGENIC
X	13507379	X_13507379_SNP [dm3] X_13613346_SNP [dm6]	C	T	2.368e^-4	0.707	UTR_3_PRIME tth DOWNSTREAM BthD
2L	2069847	2L_2069847_SNP [dm3] 2L_2069847_SNP [dm6]	T	G	2.370e^-4	0.707	INTRON dpr3
3L	3735622	3L_3735622_SNP [dm3] 3L_3735622_SNP [dm6]	C	A	2.384e^-4	0.707	INTRON CG32264
3R	18757759	3R_18757759_SNP [dm3] 3R_22932037_SNP [dm6]	T	G	2.385e^-4	0.707	INTRON klg
3R	25866217	3R_25866217_SNP [dm3] 3R_30040495_SNP [dm6]	G	C	2.393e^-4	0.707	SYNONYMOUS_CODING Sry-beta UPSTREAM janA & 1 other	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	18234532	2L_18234532_SNP [dm3] 2L_18234532_SNP [dm6]	A	G	2.394e^-4	0.707	INTRON CG42750	TF binding site BDTNP1_TFBS_prd mE1_TFBS_chinmo
2L	17005079	2L_17005079_SNP [dm3] 2L_17005079_SNP [dm6]	C	T	2.394e^-4	0.707	INTERGENIC
X	19429669	X_19429669_SNP [dm3] X_19535636_SNP [dm6]	C	A	2.395e^-4	0.707	INTRON CG32532
3L	1575495	3L_1575495_SNP [dm3] 3L_1575495_SNP [dm6]	A	G	2.402e^-4	0.707	UTR_3_PRIME CG12004 DOWNSTREAM CG12004
X	14262496	X_14262496_SNP [dm3] X_14368463_SNP [dm6]	C	T	2.403e^-4	0.707	INTRON dpr8
2L	16997184	2L_16997184_SNP [dm3] 2L_16997184_SNP [dm6]	C	T	2.410e^-4	0.707	INTERGENIC
3L	11062695	3L_11062695_SNP [dm3] 3L_11069595_SNP [dm6]	A	T	2.415e^-4	0.707	UPSTREAM Mocs1 DOWNSTREAM SuUR & 1 other INTRON CG6310
2R	19361131	2R_19361131_SNP [dm3] 2R_23473608_SNP [dm6]	G	A	2.424e^-4	0.707	UTR_5_PRIME Or59c INTRON CG43795
2L	5309267	2L_5309267_SNP [dm3] 2L_5309267_SNP [dm6]	T	A	2.425e^-4	0.707	SYNONYMOUS_CODING vri	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	13130924	2R_13130924_SNP [dm3] 2R_17243419_SNP [dm6]	C	T	2.433e^-4	0.707	INTRON mbl
3R	17211232	3R_17211232_SNP [dm3] 3R_21385510_SNP [dm6]	C	T	2.439e^-4	0.707	INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
2R	15873401	2R_15873401_SNP [dm3] 2R_19985896_SNP [dm6]	C	A	2.444e^-4	0.707	INTERGENIC
3L	1834881	3L_1834881_SNP [dm3] 3L_1834881_SNP [dm6]	G	T	2.450e^-4	0.707	SYNONYMOUS_CODING Cpr62Bb	TF binding site mE1_TFBS_inv
3L	18443911	3L_18443911_SNP [dm3] 3L_18450811_SNP [dm6]	C	A	2.451e^-4	0.707	INTERGENIC
X	17378412	X_17378412_SNP [dm3] X_17484379_SNP [dm6]	A	T	2.453e^-4	0.707	INTRON CG43658	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	12613437	3L_12613437_SNP [dm3] 3L_12620337_SNP [dm6]	C	G	2.455e^-4	0.707	NON_SYNONYMOUS_CODING caup	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	19361143	2R_19361143_SNP [dm3] 2R_23473620_SNP [dm6]	A	T	2.458e^-4	0.707	UTR_5_PRIME Or59c INTRON CG43795
2L	3929041	2L_3929041_SNP [dm3] 2L_3929041_SNP [dm6]	G	A	2.460e^-4	0.707	INTRON fred
3L	20527031	3L_20527031_SNP [dm3] 3L_20533931_SNP [dm6]	C	A	2.471e^-4	0.707	UPSTREAM CG13250 INTRON Rcd2 & 1 other
2L	9990257	2L_9990257_SNP [dm3] 2L_9990257_SNP [dm6]	G	A	2.484e^-4	0.707	INTRON bib	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3L	1839181	3L_1839181_SNP [dm3] 3L_1839181_SNP [dm6]	C	A	2.491e^-4	0.707	INTERGENIC
3L	1847790	3L_1847790_SNP [dm3] 3L_1847790_SNP [dm6]	A	G	2.495e^-4	0.707	INTERGENIC
3R	11455728	3R_11455728_SNP [dm3] 3R_15630006_SNP [dm6]	G	T	2.499e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	19426025	2R_19426025_SNP [dm3] 2R_23538502_SNP [dm6]	C	T	2.508e^-4	0.707	UPSTREAM bw DOWNSTREAM ppk3 INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	8864634	2R_8864634_SNP [dm3] 2R_12977129_SNP [dm6]	G	A	2.514e^-4	0.707	INTRON Psc	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA
2L	18304147	2L_18304147_SNP [dm3] 2L_18304147_SNP [dm6]	G	A	2.519e^-4	0.707	INTERGENIC
3R	26759177	3R_26759177_SNP [dm3] 3R_30933455_SNP [dm6]	C	A	2.521e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2R	11164178	2R_11164178_SNP [dm3] 2R_15276673_SNP [dm6]	G	A	2.522e^-4	0.707	INTRON Trpm
3L	2563687	3L_2563687_SNP [dm3] 3L_2563687_SNP [dm6]	T	G	2.526e^-4	0.707	INTRON msn
2L	18314783	2L_18314783_SNP [dm3] 2L_18314783_SNP [dm6]	G	T	2.528e^-4	0.707	UPSTREAM CR44489 INTERGENIC
2R	7898872	2R_7898872_SNP [dm3] 2R_12011367_SNP [dm6]	A	G	2.531e^-4	0.707	INTRON otk
3R	18575189	3R_18575189_SNP [dm3] 3R_22749467_SNP [dm6]	G	A	2.534e^-4	0.707	SYNONYMOUS_CODING rumi UPSTREAM CG31139	TF binding site BDTNP1_TFBS_sna
3L	1837299	3L_1837299_SNP [dm3] 3L_1837299_SNP [dm6]	C	G	2.537e^-4	0.707	INTERGENIC
3L	3421268	3L_3421268_SNP [dm3] 3L_3421268_SNP [dm6]	G	T	2.538e^-4	0.707	INTRON sty
3L	11060385	3L_11060385_SNP [dm3] 3L_11067285_SNP [dm6]	G	A	2.541e^-4	0.707	SYNONYMOUS_CODING SuUR UTR_3_PRIME CG45101
3R	4467820	3R_4467820_SNP [dm3] 3R_8642098_SNP [dm6]	A	T	2.543e^-4	0.707	DOWNSTREAM tRNA:Y1:85Ae & 2 others INTERGENIC
X	14262563	X_14262563_SNP [dm3] X_14368530_SNP [dm6]	C	T	2.545e^-4	0.707	INTRON dpr8
X	4913314	X_4913314_SNP [dm3] X_5019281_SNP [dm6]	C	A	2.552e^-4	0.707	INTRON CR44833
2L	16571239	2L_16571239_SNP [dm3] 2L_16571239_SNP [dm6]	A	T	2.554e^-4	0.707	INTRON CG42389
3R	21511963	3R_21511963_SNP [dm3] 3R_25686241_SNP [dm6]	C	T	2.554e^-4	0.707	INTRON CLS	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_inv
3L	12352310	3L_12352310_SNP [dm3] 3L_12359210_SNP [dm6]	G	C	2.561e^-4	0.707	INTERGENIC
2R	17409548	2R_17409548_DEL [dm3] 2R_21522043_DEL [dm6]	GTTTG	T	2.565e^-4	0.707	UPSTREAM Egfr & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_Trl
X	17248465	X_17248465_SNP [dm3] X_17354432_SNP [dm6]	C	T	2.567e^-4	0.707	INTERGENIC
2L	10181534	2L_10181534_SNP [dm3] 2L_10181534_SNP [dm6]	T	C	2.572e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_inv
3L	13656364	3L_13656364_SNP [dm3] 3L_13663264_SNP [dm6]	T	G	2.585e^-4	0.707	INTRON bru-3
2L	16309451	2L_16309451_DEL [dm3] 2L_16309451_DEL [dm6]	GAGAG	G	2.587e^-4	0.707	UTR_3_PRIME cni DOWNSTREAM cni & 1 other
3R	25528155	3R_25528155_SNP [dm3] 3R_29702433_SNP [dm6]	T	A	2.591e^-4	0.707	INTERGENIC	enhancer mE1_CBP_Enhancers TF binding site BDTNP1_TFBS_twi
3R	18573332	3R_18573332_SNP [dm3] 3R_22747610_SNP [dm6]	A	G	2.599e^-4	0.707	UPSTREAM CG17141 DOWNSTREAM CG31139 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	3496606	3L_3496606_SNP [dm3] 3L_3496606_SNP [dm6]	A	G	2.607e^-4	0.707	INTRON CG42324
3L	14242409	3L_14242409_SNP [dm3] 3L_14249309_SNP [dm6]	T	A	2.609e^-4	0.707	INTERGENIC
X	5366948	X_5366948_SNP [dm3] X_5472915_SNP [dm6]	A	T	2.611e^-4	0.707	INTRON SPR
X	4679097	X_4679097_SNP [dm3] X_4785064_SNP [dm6]	A	T	2.613e^-4	0.707	SYNONYMOUS_CODING CG6978	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	14151438	X_14151438_SNP [dm3] X_14257405_SNP [dm6]	G	A	2.614e^-4	0.707	SYNONYMOUS_CODING mud UTR_3_PRIME mud INTRON mud	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	6758340	2R_6758340_SNP [dm3] 2R_10870835_SNP [dm6]	A	G	2.621e^-4	0.707	INTRON CG30015	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	12361492	3L_12361492_SNP [dm3] 3L_12368392_SNP [dm6]	T	C	2.638e^-4	0.707	DOWNSTREAM Ncc69 INTERGENIC
3R	26759975	3R_26759975_SNP [dm3] 3R_30934253_SNP [dm6]	C	A	2.648e^-4	0.707	INTERGENIC
2L	2155547	2L_2155547_SNP [dm3] 2L_2155547_SNP [dm6]	T	A	2.648e^-4	0.707	UPSTREAM CG15382 DOWNSTREAM AIF & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	9978808	2R_9978808_SNP [dm3] 2R_14091303_SNP [dm6]	C	T	2.649e^-4	0.707	SYNONYMOUS_CODING CG42288 DOWNSTREAM CG42287 INTRON Prosap
3R	15007221	3R_15007221_SNP [dm3] 3R_19181499_SNP [dm6]	A	T	2.661e^-4	0.707	UPSTREAM CG5555 INTRON CG31475	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	14627196	2L_14627196_SNP [dm3] 2L_14627196_SNP [dm6]	C	T	2.666e^-4	0.707	INTRON osp	TF binding site BDTNP1_TFBS_dl
3R	8679055	3R_8679055_SNP [dm3] 3R_12853333_SNP [dm6]	C	T	2.666e^-4	0.707	INTERGENIC
X	8628528	X_8628528_SNP [dm3] X_8734495_SNP [dm6]	G	A	2.670e^-4	0.707	INTERGENIC
3R	3116863	3R_3116863_SNP [dm3] 3R_7291141_SNP [dm6]	C	A	2.671e^-4	0.707	INTRON rn
2L	18292114	2L_18292114_SNP [dm3] 2L_18292114_SNP [dm6]	C	G	2.677e^-4	0.707	UPSTREAM CR44696 & 2 others DOWNSTREAM CR44693 INTERGENIC
X	16410689	X_16410689_SNP [dm3] X_16516656_SNP [dm6]	T	A	2.677e^-4	0.707	INTRON para
3L	18443827	3L_18443827_SNP [dm3] 3L_18450727_SNP [dm6]	A	C	2.678e^-4	0.707	INTERGENIC
3L	1903555	3L_1903555_SNP [dm3] 3L_1903555_SNP [dm6]	G	T	2.678e^-4	0.707	INTRON CG1887
2L	18229202	2L_18229202_SNP [dm3] 2L_18229202_SNP [dm6]	T	C	2.694e^-4	0.707	INTRON CG42750
3L	5530075	3L_5530075_SNP [dm3] 3L_5536975_SNP [dm6]	T	C	2.702e^-4	0.707	INTERGENIC
3L	7934789	3L_7934789_SNP [dm3] 3L_7941689_SNP [dm6]	A	C	2.707e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	11108332	3L_11108332_SNP [dm3] 3L_11115232_SNP [dm6]	C	T	2.710e^-4	0.707	SYNONYMOUS_CODING fd68A
3L	1847812	3L_1847812_SNP [dm3] 3L_1847812_SNP [dm6]	C	G	2.711e^-4	0.707	INTERGENIC
2R	16987598	2R_16987598_SNP [dm3] 2R_21100093_SNP [dm6]	A	C	2.712e^-4	0.707	INTRON CG34396	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3R	16955700	3R_16955700_SNP [dm3] 3R_21129978_SNP [dm6]	A	G	2.721e^-4	0.707	UPSTREAM Ice2 & 1 other DOWNSTREAM CG5793 INTERGENIC
X	14135621	X_14135621_SNP [dm3] X_14241588_SNP [dm6]	G	T	2.730e^-4	0.707	SYNONYMOUS_CODING mRNA-cap	TF binding site mE1_TFBS_cad
2L	8734342	2L_8734342_SNP [dm3] 2L_8734342_SNP [dm6]	T	C	2.731e^-4	0.707	INTRON raw
X	18193155	X_18193155_SNP [dm3] X_18299122_SNP [dm6]	C	A	2.731e^-4	0.707	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
2R	18561405	2R_18561405_SNP [dm3] 2R_22673900_SNP [dm6]	T	A	2.735e^-4	0.707	UPSTREAM CR44761 DOWNSTREAM RYBP INTERGENIC
2R	18561448	2R_18561448_SNP [dm3] 2R_22673943_SNP [dm6]	T	A	2.735e^-4	0.707	UPSTREAM CR44761 DOWNSTREAM RYBP INTERGENIC	TF binding site mE1_TFBS_sens
3L	5099659	3L_5099659_SNP [dm3] 3L_5099659_SNP [dm6]	G	T	2.742e^-4	0.707	EXON CR34047
2L	12715671	2L_12715671_SNP [dm3] 2L_12715671_SNP [dm6]	G	T	2.745e^-4	0.707	INTRON CG5792
2L	13823447	2L_13823447_SNP [dm3] 2L_13823447_SNP [dm6]	T	C	2.751e^-4	0.707	SYNONYMOUS_CODING b DOWNSTREAM tam	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	6070837	2L_6070837_SNP [dm3] 2L_6070837_SNP [dm6]	T	A	2.761e^-4	0.707	UPSTREAM Kr-h2 & 1 other DOWNSTREAM CG13993 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
X	6298818	X_6298818_SNP [dm3] X_6404785_SNP [dm6]	T	G	2.763e^-4	0.707	INTERGENIC
X	14090973	X_14090973_SNP [dm3] X_14196940_SNP [dm6]	A	G	2.770e^-4	0.707	NON_SYNONYMOUS_CODING yl	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo
X	5766096	X_5766096_SNP [dm3] X_5872063_SNP [dm6]	C	G	2.779e^-4	0.707	SYNONYMOUS_CODING GAA1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	17248423	X_17248423_SNP [dm3] X_17354390_SNP [dm6]	C	T	2.785e^-4	0.707	INTERGENIC
X	1667188	X_1667188_SNP [dm3] X_1773155_SNP [dm6]	A	G	2.796e^-4	0.707	UPSTREAM CG42666 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	9647190	2R_9647190_SNP [dm3] 2R_13759685_SNP [dm6]	G	C	2.803e^-4	0.707	DOWNSTREAM CG6280 INTERGENIC
X	20844446	X_20844446_SNP [dm3] X_20973419_SNP [dm6]	A	G	2.806e^-4	0.707	INTERGENIC
3L	3022544	3L_3022544_SNP [dm3] 3L_3022544_SNP [dm6]	T	C	2.810e^-4	0.707	INTERGENIC
2R	17864541	2R_17864541_SNP [dm3] 2R_21977036_SNP [dm6]	G	A	2.816e^-4	0.707	SYNONYMOUS_CODING Gr58c DOWNSTREAM CG9304	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	20527019	3L_20527019_DEL [dm3] 3L_20533919_DEL [dm6]	GTATTTTA	G	2.836e^-4	0.707	UPSTREAM CG13250 INTRON Rcd2 & 1 other
2L	7770846	2L_7770846_SNP [dm3] 2L_7770846_SNP [dm6]	G	C	2.838e^-4	0.707	INTRON CG7191
3R	5724823	3R_5724823_SNP [dm3] 3R_9899101_SNP [dm6]	T	C	2.843e^-4	0.707	INTRON Glut4EF
3L	20527034	3L_20527034_SNP [dm3] 3L_20533934_SNP [dm6]	A	T	2.846e^-4	0.707	UPSTREAM CG13250 INTRON Rcd2 & 1 other
2R	12946881	2R_12946881_SNP [dm3] 2R_17059376_SNP [dm6]	C	T	2.850e^-4	0.707	UTR_3_PRIME CG8950 DOWNSTREAM CG8950 & 1 other
X	12478872	X_12478872_SNP [dm3] X_12584839_SNP [dm6]	A	G	2.851e^-4	0.707	UTR_3_PRIME LIMK1 DOWNSTREAM LIMK1
2R	18561408	2R_18561408_SNP [dm3] 2R_22673903_SNP [dm6]	G	A	2.851e^-4	0.707	UPSTREAM CR44761 DOWNSTREAM RYBP INTERGENIC
2L	18288541	2L_18288541_SNP [dm3] 2L_18288541_SNP [dm6]	C	T	2.854e^-4	0.707	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	13741897	X_13741897_DEL [dm3] X_13847864_DEL [dm6]	CC	C	2.857e^-4	0.707	UTR_3_PRIME mamo
3L	9333200	3L_9333200_SNP [dm3] 3L_9340100_SNP [dm6]	G	A	2.864e^-4	0.707	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	14059123	3R_14059123_SNP [dm3] 3R_18233401_SNP [dm6]	G	T	2.865e^-4	0.707	INTERGENIC	regulatory region REDfly_CRMs
2R	5235581	2R_5235581_SNP [dm3] 2R_9348076_SNP [dm6]	T	C	2.870e^-4	0.707	UTR_3_PRIME Or45a INTRON CG13954 & 1 other
2L	18621992	2L_18621992_SNP [dm3] 2L_18621992_SNP [dm6]	T	A	2.872e^-4	0.707	INTRON MESR3
2R	2106781	2R_2106781_DEL [dm3] 2R_6219276_DEL [dm6]	AACATTAAATACCTCACA...	A	2.878e^-4	0.707	UPSTREAM CR44161 INTRON bin3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18316303	2L_18316303_SNP [dm3] 2L_18316303_SNP [dm6]	A	G	2.881e^-4	0.707	INTERGENIC
3R	15347175	3R_15347175_SNP [dm3] 3R_19521453_SNP [dm6]	T	A	2.882e^-4	0.707	INTRON Dys
3L	5089537	3L_5089537_SNP [dm3] 3L_5089537_SNP [dm6]	C	T	2.882e^-4	0.707	INTERGENIC
2R	19426028	2R_19426028_SNP [dm3] 2R_23538505_SNP [dm6]	A	T	2.886e^-4	0.707	UPSTREAM bw DOWNSTREAM ppk3 INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	15851610	3R_15851610_SNP [dm3] 3R_20025888_SNP [dm6]	G	A	2.887e^-4	0.707	SYNONYMOUS_CODING psidin DOWNSTREAM CG4424	TF binding site mE1_TFBS_cad
3R	11935771	3R_11935771_SNP [dm3] 3R_16110049_SNP [dm6]	C	G	2.889e^-4	0.707	INTERGENIC
X	18730490	X_18730490_SNP [dm3] X_18836457_SNP [dm6]	C	T	2.892e^-4	0.707	INTRON Pvf1
3L	11060817	3L_11060817_SNP [dm3] 3L_11067717_SNP [dm6]	C	T	2.896e^-4	0.707	SYNONYMOUS_CODING SuUR UTR_3_PRIME CG45101	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	9478491	3L_9478491_SNP [dm3] 3L_9485391_SNP [dm6]	C	T	2.897e^-4	0.707	SYNONYMOUS_CODING Jarid2	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	3805287	X_3805287_SNP [dm3] X_3911254_SNP [dm6]	A	T	2.897e^-4	0.707	INTRON CG42541	TF binding site mE1_TFBS_chinmo
3L	2022367	3L_2022367_SNP [dm3] 3L_2022367_SNP [dm6]	G	C	2.899e^-4	0.707	UPSTREAM CG42357 INTRON CG42356
3R	22887010	3R_22887010_SNP [dm3] 3R_27061288_SNP [dm6]	G	A	2.903e^-4	0.707	NON_SYNONYMOUS_CODING Nep5 UPSTREAM CG34292
2L	18275902	2L_18275902_SNP [dm3] 2L_18275902_SNP [dm6]	A	T	2.903e^-4	0.707	UPSTREAM CG42750 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	24747699	3R_24747699_SNP [dm3] 3R_28921977_SNP [dm6]	C	T	2.905e^-4	0.707	UTR_3_PRIME Doa DOWNSTREAM Doa	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	15905848	2R_15905848_SNP [dm3] 2R_20018343_SNP [dm6]	T	C	2.906e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	18219752	2L_18219752_SNP [dm3] 2L_18219752_SNP [dm6]	A	T	2.909e^-4	0.707	INTRON CG42750
2L	7546561	2L_7546561_DEL [dm3] 2L_7546561_DEL [dm6]	TGGTT	T	2.911e^-4	0.707	INTRON RapGAP1	TF binding site BDTNP1_TFBS_dl
3R	8658024	3R_8658024_SNP [dm3] 3R_12832302_SNP [dm6]	A	G	2.915e^-4	0.707	INTERGENIC
X	19891712	X_19891712_SNP [dm3] X_19997679_SNP [dm6]	T	A	2.916e^-4	0.707	INTERGENIC
3L	4969502	3L_4969502_SNP [dm3] 3L_4969502_SNP [dm6]	C	T	2.917e^-4	0.707	INTRON Con	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	9333292	3L_9333292_SNP [dm3] 3L_9340192_SNP [dm6]	G	T	2.918e^-4	0.707	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	18227898	3L_18227898_SNP [dm3] 3L_18234798_SNP [dm6]	C	T	2.920e^-4	0.707	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	26062041	3R_26062041_SNP [dm3] 3R_30236319_SNP [dm6]	A	T	2.920e^-4	0.707	DOWNSTREAM CG43448 INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	10215683	2L_10215683_SNP [dm3] 2L_10215683_SNP [dm6]	G	T	2.925e^-4	0.707	SYNONYMOUS_CODING Npc1a	TF binding site mE1_TFBS_inv mE1_TFBS_sens
X	759846	X_759846_SNP [dm3] X_865813_SNP [dm6]	A	G	2.926e^-4	0.707	INTRON CG43867
X	20483652	X_20483652_INS [dm3] X_20612625_INS [dm6]	G	GGATA	2.932e^-4	0.707	INTRON RunxA
X	12979002	X_12979002_SNP [dm3] X_13084969_SNP [dm6]	G	A	2.935e^-4	0.707	INTRON hep
2L	18291991	2L_18291991_SNP [dm3] 2L_18291991_SNP [dm6]	T	C	2.942e^-4	0.707	UPSTREAM CR44696 & 2 others EXON CR44693
3R	19853171	3R_19853171_SNP [dm3] 3R_24027449_SNP [dm6]	G	A	2.944e^-4	0.707	INTRON KrT95D	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	17175292	X_17175292_SNP [dm3] X_17281259_SNP [dm6]	T	C	2.944e^-4	0.707	UTR_3_PRIME CG8664 DOWNSTREAM CG8664 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2L	7881500	2L_7881500_SNP [dm3] 2L_7881500_SNP [dm6]	A	T	2.945e^-4	0.707	INTERGENIC
X	14703681	X_14703681_DEL [dm3] X_14809648_DEL [dm6]	AGTGATGCTATTATA...	A	2.950e^-4	0.707	INTRON rut
3R	4606495	3R_4606495_SNP [dm3] 3R_8780773_SNP [dm6]	T	C	2.953e^-4	0.707	UTR_5_PRIME CG33189 UPSTREAM CG33191 & 1 other DOWNSTREAM Pif1A INTRON Pif1B & 1 other	TF binding site mE1_TFBS_cad
3R	5994806	3R_5994806_SNP [dm3] 3R_10169084_SNP [dm6]	A	G	2.956e^-4	0.707	INTRON Best1	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Kr mE1_TFBS_zfh1
2L	2161899	2L_2161899_SNP [dm3] 2L_2161899_SNP [dm6]	A	T	2.963e^-4	0.707	UPSTREAM aop INTRON aop	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3R	8679309	3R_8679309_SNP [dm3] 3R_12853587_SNP [dm6]	A	G	2.971e^-4	0.707	INTERGENIC
3L	19950940	3L_19950940_SNP [dm3] 3L_19957840_SNP [dm6]	A	T	2.971e^-4	0.707	INTRON Ac76E
2L	16948326	2L_16948326_SNP [dm3] 2L_16948326_SNP [dm6]	G	A	2.973e^-4	0.707	INTRON CR44393
X	10452013	X_10452013_SNP [dm3] X_10557980_SNP [dm6]	A	C	2.973e^-4	0.707	UPSTREAM spri INTRON spri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	19145479	2L_19145479_SNP [dm3] 2L_19145479_SNP [dm6]	G	C	2.974e^-4	0.707	INTRON brat
X	12979417	X_12979417_SNP [dm3] X_13085384_SNP [dm6]	G	A	2.975e^-4	0.707	INTRON hep
2L	12100875	2L_12100875_SNP [dm3] 2L_12100875_SNP [dm6]	G	T	2.978e^-4	0.707	UTR_3_PRIME Patsas DOWNSTREAM Ced-12
X	2467219	X_2467219_SNP [dm3] X_2573186_SNP [dm6]	A	C	2.980e^-4	0.707	SYNONYMOUS_CODING Pdfr
X	17635955	X_17635955_SNP [dm3] X_17741922_SNP [dm6]	A	G	2.989e^-4	0.707	INTRON CG42684	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	1847800	3L_1847800_INS [dm3] 3L_1847800_INS [dm6]	A	AG	2.990e^-4	0.707	INTERGENIC
X	1817644	X_1817644_SNP [dm3] X_1923611_SNP [dm6]	G	A	2.992e^-4	0.707	UTR_5_PRIME Ocrl UPSTREAM eIF2B-epsilon	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
X	12478543	X_12478543_SNP [dm3] X_12584510_SNP [dm6]	T	C	2.996e^-4	0.707	UTR_3_PRIME LIMK1 DOWNSTREAM LIMK1	TF binding site BDTNP1_TFBS_dl
2L	14898258	2L_14898258_SNP [dm3] 2L_14898258_SNP [dm6]	T	C	3.001e^-4	0.707	INTERGENIC
3R	21537013	3R_21537013_SNP [dm3] 3R_25711291_SNP [dm6]	G	C	3.003e^-4	0.707	INTRON LpR2
X	20483658	X_20483658_SNP [dm3] X_20612631_SNP [dm6]	T	C	3.004e^-4	0.707	INTRON RunxA
X	7433384	X_7433384_SNP [dm3] X_7539351_SNP [dm6]	G	A	3.005e^-4	0.707	INTRON CG32719
2R	12946898	2R_12946898_SNP [dm3] 2R_17059393_SNP [dm6]	T	A	3.006e^-4	0.707	UTR_3_PRIME CG8950 DOWNSTREAM CG8950 & 1 other
3L	4969424	3L_4969424_SNP [dm3] 3L_4969424_SNP [dm6]	A	G	3.007e^-4	0.707	INTRON Con	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	8286362	X_8286362_SNP [dm3] X_8392329_SNP [dm6]	T	A	3.009e^-4	0.707	INTERGENIC
3L	1751879	3L_1751879_SNP [dm3] 3L_1751879_SNP [dm6]	G	A	3.014e^-4	0.707	UTR_3_PRIME CG13921 DOWNSTREAM Cht2
3L	18460309	3L_18460309_SNP [dm3] 3L_18467209_SNP [dm6]	A	G	3.024e^-4	0.707	INTERGENIC
3R	13584516	3R_13584516_SNP [dm3] 3R_17758794_SNP [dm6]	C	T	3.033e^-4	0.707	UTR_5_PRIME TyrR INTRON TyrR
2L	9634029	2L_9634029_SNP [dm3] 2L_9634029_SNP [dm6]	T	G	3.039e^-4	0.707	UPSTREAM Apoltp INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	16313589	2L_16313589_DEL [dm3] 2L_16313589_DEL [dm6]	GG	G	3.040e^-4	0.707	DOWNSTREAM cact & 1 other INTRON cact	TF binding site BDTNP1_TFBS_dl
2L	20803927	2L_20803927_SNP [dm3] 2L_20803927_SNP [dm6]	C	T	3.042e^-4	0.707	INTRON CG9328	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	15383312	2R_15383312_SNP [dm3] 2R_19495807_SNP [dm6]	C	T	3.042e^-4	0.707	SYNONYMOUS_CODING hpo	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
4	580438	4_580438_SNP [dm3] 4_559812_SNP [dm6]	C	T	3.043e^-4	0.707	START_GAINED Pur-alpha UTR_5_PRIME Pur-alpha INTRON Pur-alpha	TF binding site BDTNP1_TFBS_dl
3R	4893834	3R_4893834_SNP [dm3] 3R_9068112_SNP [dm6]	A	G	3.045e^-4	0.707	UTR_3_PRIME pum
2L	3680755	2L_3680755_SNP [dm3] 2L_3680755_SNP [dm6]	T	C	3.050e^-4	0.707	INTRON CG34340
3R	19430628	3R_19430628_SNP [dm3] 3R_23604906_SNP [dm6]	G	C	3.056e^-4	0.707	NON_SYNONYMOUS_CODING CG10184 DOWNSTREAM CG31145	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	21516467	3R_21516467_SNP [dm3] 3R_25690745_SNP [dm6]	G	A	3.059e^-4	0.707	INTERGENIC
X	12216464	X_12216464_SNP [dm3] X_12322431_SNP [dm6]	G	A	3.062e^-4	0.707	SYNONYMOUS_CODING Ten-a	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18414499	2L_18414499_SNP [dm3] 2L_18414499_SNP [dm6]	G	A	3.066e^-4	0.707	INTERGENIC
2L	2069853	2L_2069853_SNP [dm3] 2L_2069853_SNP [dm6]	T	C	3.067e^-4	0.707	INTRON dpr3
2L	16309280	2L_16309280_SNP [dm3] 2L_16309280_SNP [dm6]	C	G	3.071e^-4	0.707	DOWNSTREAM cni & 1 other INTERGENIC
X	12972237	X_12972237_SNP [dm3] X_13078204_SNP [dm6]	C	T	3.079e^-4	0.707	UTR_3_PRIME rad	TF binding site mE1_TFBS_kn
2R	18561407	2R_18561407_SNP [dm3] 2R_22673902_SNP [dm6]	T	A	3.080e^-4	0.707	UPSTREAM CR44761 DOWNSTREAM RYBP INTERGENIC
2R	2110135	2R_2110135_SNP [dm3] 2R_6222630_SNP [dm6]	G	T	3.086e^-4	0.707	INTRON bin3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9634404	2L_9634404_SNP [dm3] 2L_9634404_SNP [dm6]	T	A	3.090e^-4	0.707	INTRON Apoltp	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2R	9475013	2R_9475013_SNP [dm3] 2R_13587508_SNP [dm6]	G	C	3.091e^-4	0.707	INTRON CG6191 & 1 other
2R	9519746	2R_9519746_SNP [dm3] 2R_13632241_SNP [dm6]	G	T	3.104e^-4	0.707	INTRON fas
3L	12444626	3L_12444626_SNP [dm3] 3L_12451526_SNP [dm6]	T	G	3.105e^-4	0.707	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10469431	X_10469431_SNP [dm3] X_10575398_SNP [dm6]	C	A	3.105e^-4	0.707	NON_SYNONYMOUS_CODING spri
3R	18573370	3R_18573370_SNP [dm3] 3R_22747648_SNP [dm6]	G	T	3.106e^-4	0.707	UPSTREAM CG17141 DOWNSTREAM CG31139 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	5966520	X_5966520_SNP [dm3] X_6072487_SNP [dm6]	A	C	3.106e^-4	0.707	INTRON Tsp5D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18235976	2L_18235976_SNP [dm3] 2L_18235976_SNP [dm6]	C	T	3.108e^-4	0.707	INTRON CG42750	TF binding site BDTNP1_TFBS_prd
3R	26996731	3R_26996731_SNP [dm3] 3R_31171009_SNP [dm6]	G	A	3.122e^-4	0.707	SPLICE_SITE_REGION Gycbeta100B SYNONYMOUS_CODING Gycbeta100B	TF binding site mE1_TFBS_cad
3L	16810192	3L_16810192_SNP [dm3] 3L_16817092_SNP [dm6]	G	T	3.127e^-4	0.707	INTRON nudC & 1 other
3L	12613390	3L_12613390_SNP [dm3] 3L_12620290_SNP [dm6]	A	G	3.130e^-4	0.707	SYNONYMOUS_CODING caup	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9474290	2R_9474290_SNP [dm3] 2R_13586785_SNP [dm6]	A	G	3.133e^-4	0.707	INTRON CG6191 & 1 other
X	6877997	X_6877997_INS [dm3] X_6983964_INS [dm6]	A	ACAGAGAGA	3.134e^-4	0.707	UTR_5_PRIME ogre UPSTREAM CR44084 INTRON ogre	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	885287	3R_885287_SNP [dm3] 3R_5059565_SNP [dm6]	G	C	3.134e^-4	0.707	INTERGENIC
3R	8475641	3R_8475641_SNP [dm3] 3R_12649919_SNP [dm6]	T	C	3.137e^-4	0.707	INTRON Dtg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2L	2161896	2L_2161896_SNP [dm3] 2L_2161896_SNP [dm6]	T	G	3.137e^-4	0.707	UPSTREAM aop INTRON aop	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2L	18335526	2L_18335526_SNP [dm3] 2L_18335526_SNP [dm6]	G	A	3.141e^-4	0.707	INTRON Fas3	TF binding site BDTNP1_TFBS_twi
3R	21511209	3R_21511209_SNP [dm3] 3R_25685487_SNP [dm6]	C	T	3.146e^-4	0.707	SYNONYMOUS_CODING CLS UPSTREAM RpL27	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
2R	2107325	2R_2107325_INS [dm3] 2R_6219820_INS [dm6]	C	CCGACC	3.147e^-4	0.707	INTRON bin3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	21528634	3R_21528634_SNP [dm3] 3R_25702912_SNP [dm6]	G	C	3.153e^-4	0.707	INTRON LpR2
3R	24459794	3R_24459794_SNP [dm3] 3R_28634072_SNP [dm6]	A	G	3.156e^-4	0.707	INTRON CG10011	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_Trl
2L	6070875	2L_6070875_SNP [dm3] 2L_6070875_SNP [dm6]	G	T	3.164e^-4	0.707	UPSTREAM Kr-h2 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
2R	9408424	2R_9408424_INS [dm3] 2R_13520919_INS [dm6]	A	AGA	3.164e^-4	0.707	UPSTREAM CG13331 INTRON Vmat	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	6575495	3R_6575495_SNP [dm3] 3R_10749773_SNP [dm6]	A	G	3.169e^-4	0.707	INTRON TkR86C
3R	8679657	3R_8679657_INS [dm3] 3R_12853935_INS [dm6]	A	AATA	3.177e^-4	0.707	INTERGENIC
3R	22918354	3R_22918354_SNP [dm3] 3R_27092632_SNP [dm6]	A	G	3.187e^-4	0.707	UPSTREAM CG14258 INTERGENIC
X	13805542	X_13805542_SNP [dm3] X_13911509_SNP [dm6]	G	A	3.187e^-4	0.707	INTRON mamo
X	8114516	X_8114516_SNP [dm3] X_8220483_SNP [dm6]	A	C	3.187e^-4	0.707	INTRON sdt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
4	1126027	4_1126027_SNP [dm3] 4_1105401_SNP [dm6]	T	C	3.190e^-4	0.707	INTRON sv	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	16660077	X_16660077_SNP [dm3] X_16766044_SNP [dm6]	G	A	3.192e^-4	0.707	INTRON if
3R	8643060	3R_8643060_SNP [dm3] 3R_12817338_SNP [dm6]	T	G	3.195e^-4	0.707	UPSTREAM CG31345 INTERGENIC
3R	4063385	3R_4063385_SNP [dm3] 3R_8237663_SNP [dm6]	G	A	3.195e^-4	0.707	SYNONYMOUS_CODING Ada2b UTR_3_PRIME Ada2b DOWNSTREAM DNApol-iota
2L	6311301	2L_6311301_SNP [dm3] 2L_6311301_SNP [dm6]	G	A	3.197e^-4	0.707	INTRON Ddr
X	18423192	X_18423192_SNP [dm3] X_18529159_SNP [dm6]	C	A	3.200e^-4	0.707	NON_SYNONYMOUS_CODING CG15047 UPSTREAM CG15042 INTRON Bx
2L	15253054	2L_15253054_SNP [dm3] 2L_15253054_SNP [dm6]	C	T	3.201e^-4	0.707	UTR_3_PRIME dao INTRON dao
2R	3980697	2R_3980697_SNP [dm3] 2R_8093192_SNP [dm6]	G	T	3.201e^-4	0.707	INTRON CG8713
3L	8580309	3L_8580309_SNP [dm3] 3L_8587209_SNP [dm6]	C	A	3.207e^-4	0.707	INTRON CG43078	TF binding site mE1_TFBS_chinmo
3R	8654093	3R_8654093_SNP [dm3] 3R_12828371_SNP [dm6]	A	C	3.214e^-4	0.707	INTERGENIC
X	8927814	X_8927814_SNP [dm3] X_9033781_SNP [dm6]	A	T	3.217e^-4	0.707	INTRON CR43836 & 1 other
2R	8982725	2R_8982725_SNP [dm3] 2R_13095220_SNP [dm6]	G	A	3.221e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_inv
X	18657371	X_18657371_SNP [dm3] X_18763338_SNP [dm6]	T	A	3.222e^-4	0.707	INTERGENIC
2R	9567077	2R_9567077_SNP [dm3] 2R_13679572_SNP [dm6]	T	A	3.223e^-4	0.707	INTRON fas
3R	21536885	3R_21536885_SNP [dm3] 3R_25711163_SNP [dm6]	T	C	3.227e^-4	0.707	INTRON LpR2
3L	6640756	3L_6640756_DEL [dm3] 3L_6647656_DEL [dm6]	AT	A	3.228e^-4	0.707	INTERGENIC
3R	18575246	3R_18575246_SNP [dm3] 3R_22749524_SNP [dm6]	C	T	3.234e^-4	0.707	SYNONYMOUS_CODING rumi UPSTREAM CG31139	TF binding site BDTNP1_TFBS_sna mE1_TFBS_sens
X	18402114	X_18402114_SNP [dm3] X_18508081_SNP [dm6]	G	A	3.235e^-4	0.707	SYNONYMOUS_CODING Ggt-1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15850077	3R_15850077_SNP [dm3] 3R_20024355_SNP [dm6]	G	A	3.236e^-4	0.707	INTRON psidin	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
3R	24455434	3R_24455434_SNP [dm3] 3R_28629712_SNP [dm6]	C	G	3.240e^-4	0.707	INTRON CG10011
3L	13671731	3L_13671731_SNP [dm3] 3L_13678631_SNP [dm6]	G	T	3.242e^-4	0.707	INTRON bru-3
3R	15944468	3R_15944468_DEL [dm3] 3R_20118746_DEL [dm6]	AATATTACT	A	3.244e^-4	0.707	INTERGENIC
2R	15064673	2R_15064673_INS [dm3] 2R_19177168_INS [dm6]	T	TCCTCCC	3.251e^-4	0.707	DOWNSTREAM CG10737 INTRON CG10737
2L	3720617	2L_3720617_SNP [dm3] 2L_3720617_SNP [dm6]	A	T	3.254e^-4	0.707	UPSTREAM Shaw INTRON Shaw
3L	18227875	3L_18227875_SNP [dm3] 3L_18234775_SNP [dm6]	A	C	3.260e^-4	0.707	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	15362238	2R_15362238_SNP [dm3] 2R_19474733_SNP [dm6]	A	C	3.264e^-4	0.707	INTRON par-1
2L	13726779	2L_13726779_SNP [dm3] 2L_13726779_SNP [dm6]	C	T	3.268e^-4	0.707	INTERGENIC
2L	13726781	2L_13726781_SNP [dm3] 2L_13726781_SNP [dm6]	G	A	3.268e^-4	0.707	INTERGENIC
X	8927776	X_8927776_SNP [dm3] X_9033743_SNP [dm6]	G	T	3.271e^-4	0.707	INTRON CR43836 & 1 other
3R	14308122	3R_14308122_SNP [dm3] 3R_18482400_SNP [dm6]	A	T	3.274e^-4	0.707	INTRON fru
X	10595275	X_10595275_SNP [dm3] X_10701242_SNP [dm6]	A	T	3.275e^-4	0.707	INTRON X11Lbeta	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_HSA
2L	2264287	2L_2264287_SNP [dm3] 2L_2264287_SNP [dm6]	T	C	3.278e^-4	0.707	NON_SYNONYMOUS_CODING CG34049 DOWNSTREAM CG4270
2R	9474315	2R_9474315_SNP [dm3] 2R_13586810_SNP [dm6]	A	G	3.286e^-4	0.707	INTRON CG6191 & 1 other
2L	16644133	2L_16644133_SNP [dm3] 2L_16644133_SNP [dm6]	T	A	3.291e^-4	0.707	INTRON CG42389	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad
2R	2045311	2R_2045311_SNP [dm3] 2R_6157806_SNP [dm6]	T	G	3.315e^-4	0.707	UPSTREAM EcR & 1 other INTRON EcR	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	18218683	2L_18218683_SNP [dm3] 2L_18218683_SNP [dm6]	T	A	3.315e^-4	0.707	INTRON CG42750
2L	14627182	2L_14627182_SNP [dm3] 2L_14627182_SNP [dm6]	G	A	3.315e^-4	0.707	INTRON osp	TF binding site BDTNP1_TFBS_dl
3L	12357338	3L_12357338_SNP [dm3] 3L_12364238_SNP [dm6]	A	T	3.327e^-4	0.707	INTERGENIC
3R	21520657	3R_21520657_SNP [dm3] 3R_25694935_SNP [dm6]	T	C	3.327e^-4	0.707	INTERGENIC
3R	23153710	3R_23153710_SNP [dm3] 3R_27327988_SNP [dm6]	C	G	3.331e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	4439934	3R_4439934_SNP [dm3] 3R_8614212_SNP [dm6]	G	A	3.331e^-4	0.707	INTRON 5-HT2B	TF binding site mE1_TFBS_inv
3L	4970277	3L_4970277_SNP [dm3] 3L_4970277_SNP [dm6]	G	T	3.332e^-4	0.707	INTRON Con	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5994863	3R_5994863_SNP [dm3] 3R_10169141_SNP [dm6]	T	C	3.334e^-4	0.707	INTRON Best1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Kr mE1_TFBS_zfh1
2R	18412345	2R_18412345_SNP [dm3] 2R_22524840_SNP [dm6]	T	C	3.348e^-4	0.707	INTRON px
2R	19361080	2R_19361080_SNP [dm3] 2R_23473557_SNP [dm6]	T	C	3.348e^-4	0.707	NON_SYNONYMOUS_CODING Or59c INTRON CG43795
3R	15193261	3R_15193261_SNP [dm3] 3R_19367539_SNP [dm6]	A	G	3.351e^-4	0.707	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2L	19207490	2L_19207490_SNP [dm3] 2L_19207490_SNP [dm6]	C	T	3.351e^-4	0.707	SYNONYMOUS_CODING drl
2L	9514331	2L_9514331_SNP [dm3] 2L_9514331_SNP [dm6]	C	T	3.352e^-4	0.707	INTRON CG33298
X	10382689	X_10382689_SNP [dm3] X_10488656_SNP [dm6]	T	C	3.353e^-4	0.707	INTERGENIC
X	5966562	X_5966562_SNP [dm3] X_6072529_SNP [dm6]	A	G	3.355e^-4	0.707	INTRON Tsp5D	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	18422806	X_18422806_SNP [dm3] X_18528773_SNP [dm6]	G	A	3.358e^-4	0.707	NON_SYNONYMOUS_CODING CG15047 UPSTREAM CG15042 INTRON Bx	TF binding site mE1_TFBS_chinmo
2R	4788381	2R_4788381_SNP [dm3] 2R_8900876_SNP [dm6]	G	A	3.364e^-4	0.707	UPSTREAM ana2 & 1 other DOWNSTREAM CG13751 INTRON MrgBP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3L	10503919	3L_10503919_SNP [dm3] 3L_10510819_SNP [dm6]	G	A	3.365e^-4	0.707	INTRON A2bp1
2L	11148335	2L_11148335_SNP [dm3] 2L_11148335_SNP [dm6]	A	G	3.367e^-4	0.707	INTRON Gyc32E
3L	11062774	3L_11062774_SNP [dm3] 3L_11069674_SNP [dm6]	A	G	3.367e^-4	0.707	SYNONYMOUS_CODING CG6310 UPSTREAM Mocs1 DOWNSTREAM SuUR & 1 other
3R	14308070	3R_14308070_SNP [dm3] 3R_18482348_SNP [dm6]	G	A	3.377e^-4	0.707	INTRON fru
2L	12718175	2L_12718175_SNP [dm3] 2L_12718175_SNP [dm6]	T	A	3.382e^-4	0.707	UPSTREAM MRP INTRON CG5792	TF binding site mE1_TFBS_Trl
3R	22918344	3R_22918344_SNP [dm3] 3R_27092622_SNP [dm6]	A	C	3.383e^-4	0.707	UPSTREAM CG14258 INTERGENIC
3L	9757128	3L_9757128_INS [dm3] 3L_9764028_INS [dm6]	A	AAA	3.385e^-4	0.707	UTR_5_PRIME CG8177 INTRON CG8177	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	4981119	3L_4981119_SNP [dm3] 3L_4981119_SNP [dm6]	A	G	3.402e^-4	0.707	UPSTREAM CG17030 INTRON Con EXON CR45685	TF binding site mE1_TFBS_HSA
2R	13803017	2R_13803017_SNP [dm3] 2R_17915512_SNP [dm6]	G	A	3.409e^-4	0.707	INTRON Elk
3L	20527050	3L_20527050_DEL [dm3] 3L_20533950_DEL [dm6]	TC	T	3.412e^-4	0.707	UPSTREAM CG13250 INTRON Rcd2 & 1 other
3L	14215910	3L_14215910_SNP [dm3] 3L_14222810_SNP [dm6]	A	T	3.431e^-4	0.707	INTRON nuf
2R	15915896	2R_15915896_SNP [dm3] 2R_20028391_SNP [dm6]	C	T	3.434e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_Trl
3L	21920902	3L_21920902_SNP [dm3] 3L_21927802_SNP [dm6]	G	T	3.436e^-4	0.707	UTR_3_PRIME mub
3L	5303328	3L_5303328_INS [dm3] 3L_5310228_INS [dm6]	G	GTTCGCG	3.437e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	18272857	X_18272857_SNP [dm3] X_18378824_SNP [dm6]	C	G	3.441e^-4	0.707	NON_SYNONYMOUS_CODING por DOWNSTREAM CrebB	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	18570651	3L_18570651_SNP [dm3] 3L_18577551_SNP [dm6]	C	T	3.441e^-4	0.707	INTERGENIC
2L	7905165	2L_7905165_SNP [dm3] 2L_7905165_SNP [dm6]	A	T	3.446e^-4	0.707	INTRON Snoo	TF binding site mE1_TFBS_chinmo
2R	7904263	2R_7904263_SNP [dm3] 2R_12016758_SNP [dm6]	G	T	3.448e^-4	0.707	DOWNSTREAM CR44306 INTRON otk	TF binding site BDTNP1_TFBS_da mE1_TFBS_cnc mE1_TFBS_GATAe mE1_TFBS_HSA
X	8526835	X_8526835_SNP [dm3] X_8632802_SNP [dm6]	A	G	3.454e^-4	0.707	SYNONYMOUS_CODING oc	TF binding site BDTNP1_TFBS_dl
2L	5349789	2L_5349789_SNP [dm3] 2L_5349789_SNP [dm6]	T	C	3.456e^-4	0.707	INTRON nompC
3L	2683052	3L_2683052_SNP [dm3] 3L_2683052_SNP [dm6]	G	A	3.474e^-4	0.707	INTRON Fife
2L	18238866	2L_18238866_SNP [dm3] 2L_18238866_SNP [dm6]	T	A	3.481e^-4	0.707	INTRON CG42750
3R	21535245	3R_21535245_SNP [dm3] 3R_25709523_SNP [dm6]	G	A	3.484e^-4	0.707	SPLICE_SITE_REGION LpR2 INTRON LpR2
3L	10480781	3L_10480781_SNP [dm3] 3L_10487681_SNP [dm6]	G	A	3.485e^-4	0.707	INTRON A2bp1
3R	22853866	3R_22853866_SNP [dm3] 3R_27028144_SNP [dm6]	G	A	3.486e^-4	0.707	SYNONYMOUS_CODING RYa-R	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	19961511	3L_19961511_INS [dm3] 3L_19968411_INS [dm6]	G	GTCGG	3.493e^-4	0.707	INTRON Ac76E
2R	18561466	2R_18561466_SNP [dm3] 2R_22673961_SNP [dm6]	A	T	3.506e^-4	0.707	UPSTREAM CR44761 DOWNSTREAM RYBP INTERGENIC	TF binding site mE1_TFBS_sens
2L	16948324	2L_16948324_SNP [dm3] 2L_16948324_SNP [dm6]	T	C	3.510e^-4	0.707	INTRON CR44393
2L	9502552	2L_9502552_SNP [dm3] 2L_9502552_SNP [dm6]	G	C	3.519e^-4	0.707	INTRON CG33298
3R	15193336	3R_15193336_SNP [dm3] 3R_19367614_SNP [dm6]	T	A	3.522e^-4	0.707	INTERGENIC	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2R	15372297	2R_15372297_SNP [dm3] 2R_19484792_SNP [dm6]	A	C	3.527e^-4	0.707	UTR_3_PRIME par-1 DOWNSTREAM par-1 & 1 other	TF binding site BDTNP1_TFBS_dl
2R	15770173	2R_15770173_SNP [dm3] 2R_19882668_SNP [dm6]	C	G	3.531e^-4	0.707	INTERGENIC
2L	13740154	2L_13740154_SNP [dm3] 2L_13740154_SNP [dm6]	G	T	3.531e^-4	0.707	INTERGENIC
X	603284	X_603284_SNP [dm3] X_709251_SNP [dm6]	A	T	3.534e^-4	0.707	INTRON sdk	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	10892821	3R_10892821_SNP [dm3] 3R_15067099_SNP [dm6]	G	T	3.540e^-4	0.707	INTRON dpr9
2R	6687068	2R_6687068_SNP [dm3] 2R_10799563_SNP [dm6]	C	G	3.544e^-4	0.707	UPSTREAM CG33144 DOWNSTREAM wde INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18244670	2L_18244670_SNP [dm3] 2L_18244670_SNP [dm6]	T	A	3.546e^-4	0.707	INTRON CG42750
X	16886217	X_16886217_SNP [dm3] X_16992184_SNP [dm6]	T	A	3.550e^-4	0.707	INTRON CG45002
X	14063784	X_14063784_SNP [dm3] X_14169751_SNP [dm6]	C	T	3.550e^-4	0.707	NON_SYNONYMOUS_CODING CG12480
3L	11311898	3L_11311898_INS [dm3] 3L_11318798_INS [dm6]	A	AA	3.556e^-4	0.707	DOWNSTREAM CG6168 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr
3L	3484806	3L_3484806_SNP [dm3] 3L_3484806_SNP [dm6]	A	C	3.558e^-4	0.707	UPSTREAM CG43074 & 1 other INTRON CG42324
2R	12128390	2R_12128390_SNP [dm3] 2R_16240885_SNP [dm6]	C	G	3.562e^-4	0.707	UPSTREAM krimp DOWNSTREAM CG15708 INTERGENIC
X	5966501	X_5966501_SNP [dm3] X_6072468_SNP [dm6]	A	C	3.564e^-4	0.707	INTRON Tsp5D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	10102955	2L_10102955_SNP [dm3] 2L_10102955_SNP [dm6]	C	T	3.577e^-4	0.707	INTRON CG44153 & 1 other
3L	11861610	3L_11861610_SNP [dm3] 3L_11868510_SNP [dm6]	G	A	3.578e^-4	0.707	INTRON CG44837
3R	21511031	3R_21511031_SNP [dm3] 3R_25685309_SNP [dm6]	G	T	3.579e^-4	0.707	UTR_3_PRIME CLS UPSTREAM RpL27	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	19359992	2R_19359992_SNP [dm3] 2R_23472469_SNP [dm6]	T	C	3.579e^-4	0.707	SYNONYMOUS_CODING Or59c UPSTREAM Or59b INTRON CG43795	TF binding site mE1_TFBS_chinmo
X	12088686	X_12088686_SNP [dm3] X_12194653_SNP [dm6]	T	G	3.581e^-4	0.707	INTRON Ten-a
2L	6360037	2L_6360037_DEL [dm3] 2L_6360037_DEL [dm6]	AT	C	3.589e^-4	0.707	UPSTREAM CR44778 & 1 other INTERGENIC
2L	18261041	2L_18261041_SNP [dm3] 2L_18261041_SNP [dm6]	A	G	3.594e^-4	0.707	DOWNSTREAM CR44901 INTRON CG42750
X	12088689	X_12088689_SNP [dm3] X_12194656_SNP [dm6]	A	C	3.598e^-4	0.707	INTRON Ten-a
3L	18014358	3L_18014358_SNP [dm3] 3L_18021258_SNP [dm6]	G	T	3.599e^-4	0.707	INTRON Eip75B	TF binding site mE1_TFBS_Trl
3R	17259468	3R_17259468_SNP [dm3] 3R_21433746_SNP [dm6]	C	T	3.599e^-4	0.707	SYNONYMOUS_CODING lbl	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	3698288	2L_3698288_SNP [dm3] 2L_3698288_SNP [dm6]	G	A	3.606e^-4	0.707	UPSTREAM CG3604 DOWNSTREAM CG10031 INTERGENIC
2R	15374873	2R_15374873_SNP [dm3] 2R_19487368_SNP [dm6]	G	C	3.611e^-4	0.707	SYNONYMOUS_CODING Oseg6 UPSTREAM TBCB
2L	18303661	2L_18303661_SNP [dm3] 2L_18303661_SNP [dm6]	A	C	3.616e^-4	0.707	INTERGENIC	TF binding site mE1_TFBS_HSA
X	10382702	X_10382702_SNP [dm3] X_10488669_SNP [dm6]	A	C	3.639e^-4	0.707	INTERGENIC
3L	9333313	3L_9333313_SNP [dm3] 3L_9340213_SNP [dm6]	T	C	3.646e^-4	0.707	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	16620704	3R_16620704_SNP [dm3] 3R_20794982_SNP [dm6]	A	T	3.653e^-4	0.707	INTRON Syp
X	15680559	X_15680559_SNP [dm3] X_15786526_SNP [dm6]	A	C	3.655e^-4	0.707	NON_SYNONYMOUS_CODING mRpS30 UPSTREAM Paf-AHalpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	9706030	3R_9706030_SNP [dm3] 3R_13880308_SNP [dm6]	G	A	3.658e^-4	0.707	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9990247	2L_9990247_SNP [dm3] 2L_9990247_SNP [dm6]	T	C	3.667e^-4	0.707	INTRON bib	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi
X	1978356	X_1978356_SNP [dm3] X_2084323_SNP [dm6]	C	A	3.674e^-4	0.707	INTRON Unc-76	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	7527853	X_7527853_DEL [dm3] X_7633820_DEL [dm6]	TT	T	3.676e^-4	0.707	INTRON ct
3L	10482660	3L_10482660_SNP [dm3] 3L_10489560_SNP [dm6]	C	G	3.677e^-4	0.707	INTRON A2bp1
3R	8710555	3R_8710555_SNP [dm3] 3R_12884833_SNP [dm6]	G	A	3.679e^-4	0.707	INTERGENIC
2L	14859784	2L_14859784_SNP [dm3] 2L_14859784_SNP [dm6]	A	C	3.679e^-4	0.707	INTERGENIC
3R	18655666	3R_18655666_DEL [dm3] 3R_22829944_DEL [dm6]	CC	C	3.681e^-4	0.707	INTERGENIC
2R	8502886	2R_8502886_DEL [dm3] 2R_12615381_DEL [dm6]	TGT	T	3.689e^-4	0.707	UPSTREAM Galphaq INTRON Galphaq & 1 other	TF binding site mE1_TFBS_sens
X	8249099	X_8249099_SNP [dm3] X_8355066_SNP [dm6]	T	C	3.690e^-4	0.707	INTRON nAChRalpha3
X	14703602	X_14703602_SNP [dm3] X_14809569_SNP [dm6]	C	T	3.690e^-4	0.707	INTRON rut
2R	15201995	2R_15201995_SNP [dm3] 2R_19314490_SNP [dm6]	G	A	3.694e^-4	0.707	INTRON Rgk1
3R	21510713	3R_21510713_SNP [dm3] 3R_25684991_SNP [dm6]	T	A	3.700e^-4	0.707	UTR_5_PRIME RpL27 DOWNSTREAM CLS INTRON RpL27	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	3631015	2R_3631015_SNP [dm3] 2R_7743510_SNP [dm6]	C	T	3.702e^-4	0.707	INTRON CG30497 & 1 other
3R	15198141	3R_15198141_SNP [dm3] 3R_19372419_SNP [dm6]	C	T	3.706e^-4	0.707	INTRON Ino80	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA
2L	12715943	2L_12715943_SNP [dm3] 2L_12715943_SNP [dm6]	C	T	3.717e^-4	0.707	SYNONYMOUS_CODING CG5792 INTRON CG5792
2R	19359259	2R_19359259_SNP [dm3] 2R_23471736_SNP [dm6]	C	A	3.717e^-4	0.707	UTR_5_PRIME Or59b DOWNSTREAM Or59c INTRON CG43795
3L	657796	3L_657796_SNP [dm3] 3L_657796_SNP [dm6]	A	G	3.719e^-4	0.707	UTR_3_PRIME Rev1
X	14156341	X_14156341_SNP [dm3] X_14262308_SNP [dm6]	C	T	3.721e^-4	0.707	INTRON CG1461
3L	13671909	3L_13671909_SNP [dm3] 3L_13678809_SNP [dm6]	T	C	3.727e^-4	0.707	INTRON bru-3
X	18423646	X_18423646_SNP [dm3] X_18529613_SNP [dm6]	A	C	3.729e^-4	0.707	DOWNSTREAM CG15047 INTRON Bx
2L	12718259	2L_12718259_SNP [dm3] 2L_12718259_SNP [dm6]	G	A	3.732e^-4	0.707	UPSTREAM MRP INTRON CG5792	TF binding site mE1_TFBS_Trl
3R	16254275	3R_16254275_SNP [dm3] 3R_20428553_SNP [dm6]	A	T	3.736e^-4	0.707	INTRON Gfrl
2R	19358553	2R_19358553_SNP [dm3] 2R_23471030_SNP [dm6]	C	T	3.747e^-4	0.707	SYNONYMOUS_CODING Or59b INTRON CG43795
2R	15096814	2R_15096814_SNP [dm3] 2R_19209309_SNP [dm6]	G	A	3.764e^-4	0.707	INTRON hppy
2L	16644155	2L_16644155_SNP [dm3] 2L_16644155_SNP [dm6]	G	T	3.766e^-4	0.707	INTRON CG42389	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad
3L	1751888	3L_1751888_SNP [dm3] 3L_1751888_SNP [dm6]	C	T	3.768e^-4	0.707	UTR_3_PRIME CG13921 DOWNSTREAM Cht2
2R	19363710	2R_19363710_SNP [dm3] 2R_23476187_SNP [dm6]	G	T	3.775e^-4	0.707	UPSTREAM CR43792 DOWNSTREAM CR43793 INTRON CG43795 & 1 other
2R	19361127	2R_19361127_SNP [dm3] 2R_23473604_SNP [dm6]	C	T	3.775e^-4	0.707	UTR_5_PRIME Or59c INTRON CG43795
3R	22908597	3R_22908597_SNP [dm3] 3R_27082875_SNP [dm6]	C	T	3.779e^-4	0.707	DOWNSTREAM Cpr97Ea & 1 other INTERGENIC	TF binding site mE1_TFBS_D
3L	1968670	3L_1968670_SNP [dm3] 3L_1968670_SNP [dm6]	A	G	3.781e^-4	0.707	UPSTREAM CG1927 INTRON CG1927
2R	17255613	2R_17255613_DEL [dm3] 2R_21368108_DEL [dm6]	CT	A	3.788e^-4	0.707	INTRON cv-2	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	5385022	2R_5385022_SNP [dm3] 2R_9497517_SNP [dm6]	T	C	3.793e^-4	0.707	INTRON Wnt2	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15861260	3R_15861260_SNP [dm3] 3R_20035538_SNP [dm6]	G	A	3.799e^-4	0.707	SYNONYMOUS_CODING CG10889 DOWNSTREAM CG17193	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	13905577	2R_13905577_SNP [dm3] 2R_18018072_SNP [dm6]	G	A	3.804e^-4	0.707	UPSTREAM CG5084 INTERGENIC
2L	7267173	2L_7267173_SNP [dm3] 2L_7267173_SNP [dm6]	T	A	3.805e^-4	0.707	INTRON Wnt4	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2R	18095935	2R_18095935_SNP [dm3] 2R_22208430_SNP [dm6]	G	C	3.806e^-4	0.707	UPSTREAM CG3290 DOWNSTREAM CG3264 INTERGENIC	TF binding site mE1_TFBS_HSA
X	17166921	X_17166921_SNP [dm3] X_17272888_SNP [dm6]	T	G	3.809e^-4	0.707	SPLICE_SITE_REGION f INTRON f	TF binding site mE1_TFBS_cad
2L	9990261	2L_9990261_SNP [dm3] 2L_9990261_SNP [dm6]	T	A	3.812e^-4	0.707	INTRON bib	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3R	8377111	3R_8377111_SNP [dm3] 3R_12551389_SNP [dm6]	A	T	3.814e^-4	0.707	UTR_3_PRIME Octbeta2R DOWNSTREAM mir-284
3L	13037037	3L_13037037_SNP [dm3] 3L_13043937_SNP [dm6]	G	T	3.818e^-4	0.707	UTR_3_PRIME RpS4 UPSTREAM Syx13 DOWNSTREAM snoRNA:Psi28S-3327b & 2 others	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	21397899	3L_21397899_SNP [dm3] 3L_21404799_SNP [dm6]	T	G	3.819e^-4	0.707	DOWNSTREAM sa INTRON rgn
2L	1949335	2L_1949335_SNP [dm3] 2L_1949335_SNP [dm6]	G	T	3.819e^-4	0.707	DOWNSTREAM erm INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	8850285	2R_8850285_SNP [dm3] 2R_12962780_SNP [dm6]	A	T	3.823e^-4	0.707	INTERGENIC
2L	13459044	2L_13459044_SNP [dm3] 2L_13459044_SNP [dm6]	T	A	3.836e^-4	0.707	UPSTREAM CR45684 & 1 other DOWNSTREAM CG42809 INTRON CG42784
X	1963351	X_1963351_SNP [dm3] X_2069318_SNP [dm6]	C	T	3.844e^-4	0.707	SYNONYMOUS_CODING CG4194 INTRON CG4199	TF binding site BDTNP1_TFBS_da mE1_TFBS_cnc mE1_TFBS_HSA
2R	12548286	2R_12548286_SNP [dm3] 2R_16660781_SNP [dm6]	A	C	3.844e^-4	0.707	INTRON Picot
2R	12546961	2R_12546961_SNP [dm3] 2R_16659456_SNP [dm6]	C	A	3.855e^-4	0.707	UPSTREAM Picot INTRON Picot
2R	12547460	2R_12547460_SNP [dm3] 2R_16659955_SNP [dm6]	G	A	3.855e^-4	0.707	UPSTREAM Picot INTRON Picot
2R	12548163	2R_12548163_INS [dm3] 2R_16660658_INS [dm6]	T	TATTATAATTATAATTATAT...	3.855e^-4	0.707	INTRON Picot
2R	12548424	2R_12548424_SNP [dm3] 2R_16660919_SNP [dm6]	G	C	3.855e^-4	0.707	INTRON Picot
2R	19364667	2R_19364667_SNP [dm3] 2R_23477144_SNP [dm6]	C	T	3.857e^-4	0.707	UPSTREAM CG13557 DOWNSTREAM CR43792 INTRON CG43795 EXON CR43793
3L	2563665	3L_2563665_SNP [dm3] 3L_2563665_SNP [dm6]	T	A	3.866e^-4	0.707	INTRON msn

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=6.754e^-2)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2374 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	22876855	3R_22876855_SNP [dm3] 3R_27051133_SNP [dm6]	A	G	3.473e^-7	0.521	DOWNSTREAM TwdlT INTRON RYa-R
3R	24747991	3R_24747991_SNP [dm3] 3R_28922269_SNP [dm6]	G	C	6.852e^-7	0.521	UTR_3_PRIME Doa UPSTREAM CG11828 DOWNSTREAM Doa
2L	12797662	2L_12797662_SNP [dm3] 2L_12797662_SNP [dm6]	C	G	8.338e^-7	0.521	INTERGENIC
2L	13698952	2L_13698952_INS [dm3] 2L_13698952_INS [dm6]	C	CC	1.846e^-6	0.655	INTRON CG31814	TF binding site mE1_TFBS_sbb
2R	19426025	2R_19426025_SNP [dm3] 2R_23538502_SNP [dm6]	C	T	2.255e^-6	0.655	UPSTREAM bw DOWNSTREAM ppk3 INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	12802211	2L_12802211_SNP [dm3] 2L_12802211_SNP [dm6]	A	T	2.453e^-6	0.655	INTERGENIC
3R	2840007	3R_2840007_SNP [dm3] 3R_7014285_SNP [dm6]	T	A	2.684e^-6	0.655	INTERGENIC	TF binding site mE1_TFBS_HSA
2L	18621992	2L_18621992_SNP [dm3] 2L_18621992_SNP [dm6]	T	A	3.194e^-6	0.655	INTRON MESR3
2L	12797679	2L_12797679_SNP [dm3] 2L_12797679_SNP [dm6]	G	T	4.041e^-6	0.655	INTERGENIC
3L	14180203	3L_14180203_SNP [dm3] 3L_14187103_SNP [dm6]	G	C	4.056e^-6	0.655	SYNONYMOUS_CODING nan	TF binding site mE1_TFBS_cad
3L	19506006	3L_19506006_SNP [dm3] 3L_19512906_SNP [dm6]	C	A	4.062e^-6	0.655	INTERGENIC
3R	13293022	3R_13293022_SNP [dm3] 3R_17467300_SNP [dm6]	A	G	4.398e^-6	0.655	INTERGENIC
X	17158258	X_17158258_SNP [dm3] X_17264225_SNP [dm6]	C	A	4.559e^-6	0.655	INTRON f	TF binding site mE1_TFBS_inv
2L	12718175	2L_12718175_SNP [dm3] 2L_12718175_SNP [dm6]	T	A	5.349e^-6	0.655	UPSTREAM MRP INTRON CG5792	TF binding site mE1_TFBS_Trl
2L	14108972	2L_14108972_SNP [dm3] 2L_14108972_SNP [dm6]	A	G	5.552e^-6	0.655	SYNONYMOUS_CODING CG15293 DOWNSTREAM CG31769
3L	17761655	3L_17761655_SNP [dm3] 3L_17768555_SNP [dm6]	A	G	5.584e^-6	0.655	INTERGENIC
2L	6803934	2L_6803934_SNP [dm3] 2L_6803934_SNP [dm6]	G	T	5.954e^-6	0.657	DOWNSTREAM CG17375 INTRON CG11236	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2R	19426028	2R_19426028_SNP [dm3] 2R_23538505_SNP [dm6]	A	T	6.529e^-6	0.667	UPSTREAM bw DOWNSTREAM ppk3 INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	17757263	3L_17757263_SNP [dm3] 3L_17764163_SNP [dm6]	G	C	6.760e^-6	0.667	UPSTREAM Adgf-A & 1 other INTERGENIC	TF binding site mE1_TFBS_Trl
2R	15966024	2R_15966024_SNP [dm3] 2R_20078519_SNP [dm6]	T	A	7.330e^-6	0.687	INTERGENIC
2L	12720614	2L_12720614_SNP [dm3] 2L_12720614_SNP [dm6]	T	C	7.747e^-6	0.687	INTRON CG5792 & 1 other	TF binding site mE1_TFBS_cad
3L	9329719	3L_9329719_SNP [dm3] 3L_9336619_SNP [dm6]	C	T	8.230e^-6	0.687	INTRON PGRP-LA
2L	1430801	2L_1430801_SNP [dm3] 2L_1430801_SNP [dm6]	T	C	8.426e^-6	0.687	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	21516467	3R_21516467_SNP [dm3] 3R_25690745_SNP [dm6]	G	A	8.861e^-6	0.692	INTERGENIC
3L	9167569	3L_9167569_SNP [dm3] 3L_9174469_SNP [dm6]	G	C	9.361e^-6	0.701	INTRON Rdl
3L	8580327	3L_8580327_SNP [dm3] 3L_8587227_SNP [dm6]	A	G	1.022e^-5	0.701	INTRON CG43078	TF binding site mE1_TFBS_chinmo
2L	13694812	2L_13694812_SNP [dm3] 2L_13694812_SNP [dm6]	C	G	1.066e^-5	0.701	INTRON CG31814
2L	9826990	2L_9826990_SNP [dm3] 2L_9826990_SNP [dm6]	G	C	1.094e^-5	0.701	INTRON nAChRalpha6
3L	18038324	3L_18038324_SNP [dm3] 3L_18045224_SNP [dm6]	T	G	1.244e^-5	0.701	INTRON Eip75B
3L	17762578	3L_17762578_SNP [dm3] 3L_17769478_SNP [dm6]	G	A	1.305e^-5	0.701	INTERGENIC
3L	9329731	3L_9329731_SNP [dm3] 3L_9336631_SNP [dm6]	A	G	1.498e^-5	0.701	INTRON PGRP-LA
3R	22876886	3R_22876886_DEL [dm3] 3R_27051164_DEL [dm6]	TTC	CA	1.545e^-5	0.701	DOWNSTREAM TwdlT INTRON RYa-R
2L	18622008	2L_18622008_SNP [dm3] 2L_18622008_SNP [dm6]	T	C	1.606e^-5	0.701	INTRON MESR3
2L	18301794	2L_18301794_SNP [dm3] 2L_18301794_SNP [dm6]	C	T	1.619e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	18297712	2L_18297712_SNP [dm3] 2L_18297712_SNP [dm6]	G	A	1.654e^-5	0.701	DOWNSTREAM CG5790 INTERGENIC
X	7634221	X_7634221_SNP [dm3] X_7740188_SNP [dm6]	T	A	1.696e^-5	0.701	DOWNSTREAM Tom40 INTERGENIC	TF binding site BDTNP1_TFBS_hb
3L	2033506	3L_2033506_SNP [dm3] 3L_2033506_SNP [dm6]	C	A	1.728e^-5	0.701	INTERGENIC
2L	19818313	2L_19818313_SNP [dm3] 2L_19818313_SNP [dm6]	A	T	1.831e^-5	0.701	INTRON sick	transposable element FlyBase
2L	9634029	2L_9634029_SNP [dm3] 2L_9634029_SNP [dm6]	T	G	1.850e^-5	0.701	UPSTREAM Apoltp INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
X	5216268	X_5216268_SNP [dm3] X_5322235_SNP [dm6]	G	T	1.881e^-5	0.701	SYNONYMOUS_CODING Rnp4F	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	1752097	3L_1752097_SNP [dm3] 3L_1752097_SNP [dm6]	A	G	1.905e^-5	0.701	UTR_3_PRIME CG13921 DOWNSTREAM Cht2
3R	26759177	3R_26759177_SNP [dm3] 3R_30933455_SNP [dm6]	C	A	1.975e^-5	0.701	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	18301758	2L_18301758_SNP [dm3] 2L_18301758_SNP [dm6]	T	C	2.005e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da
2R	16811918	2R_16811918_SNP [dm3] 2R_20924413_SNP [dm6]	G	A	2.058e^-5	0.701	INTRON Rx
2L	14108969	2L_14108969_SNP [dm3] 2L_14108969_SNP [dm6]	C	T	2.068e^-5	0.701	NON_SYNONYMOUS_CODING CG15293 DOWNSTREAM CG31769
3L	5528312	3L_5528312_SNP [dm3] 3L_5535212_SNP [dm6]	A	G	2.069e^-5	0.701	SYNONYMOUS_CODING CG13285
2L	18298074	2L_18298074_SNP [dm3] 2L_18298074_SNP [dm6]	C	G	2.078e^-5	0.701	DOWNSTREAM CG5790 INTERGENIC
3L	20876225	3L_20876225_INS [dm3] 3L_20883125_INS [dm6]	T	TAAATTATATTAATTAAATA...	2.126e^-5	0.701	INTRON CG32432
2L	18299615	2L_18299615_SNP [dm3] 2L_18299615_SNP [dm6]	G	A	2.138e^-5	0.701	INTERGENIC
2L	18302676	2L_18302676_SNP [dm3] 2L_18302676_SNP [dm6]	T	A	2.201e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	5942220	3R_5942220_SNP [dm3] 3R_10116498_SNP [dm6]	C	T	2.204e^-5	0.701	INTRON CG3940
3L	22216301	3L_22216301_SNP [dm3] 3L_22223201_SNP [dm6]	C	A	2.262e^-5	0.701	INTRON olf413
3R	26759975	3R_26759975_SNP [dm3] 3R_30934253_SNP [dm6]	C	A	2.303e^-5	0.701	INTERGENIC
2L	18301695	2L_18301695_DEL [dm3] 2L_18301695_DEL [dm6]	CGA	AT	2.330e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	19676493	2L_19676493_SNP [dm3] 2L_19676493_SNP [dm6]	C	G	2.361e^-5	0.701	INTRON Lar
X	7543968	X_7543968_SNP [dm3] X_7649935_SNP [dm6]	T	A	2.378e^-5	0.701	INTRON ct
3L	9333455	3L_9333455_SNP [dm3] 3L_9340355_SNP [dm6]	G	T	2.385e^-5	0.701	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	18935431	2R_18935431_SNP [dm3] 2R_23047908_SNP [dm6]	G	C	2.407e^-5	0.701	SYNONYMOUS_CODING twi	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12798915	2L_12798915_SNP [dm3] 2L_12798915_SNP [dm6]	A	G	2.413e^-5	0.701	INTERGENIC
2L	12725277	2L_12725277_SNP [dm3] 2L_12725277_SNP [dm6]	C	T	2.497e^-5	0.701	INTRON MRP
2L	18298179	2L_18298179_SNP [dm3] 2L_18298179_SNP [dm6]	A	T	2.550e^-5	0.701	DOWNSTREAM CG5790 INTERGENIC
3L	2033133	3L_2033133_SNP [dm3] 3L_2033133_SNP [dm6]	C	T	2.604e^-5	0.701	INTERGENIC
2L	12718259	2L_12718259_SNP [dm3] 2L_12718259_SNP [dm6]	G	A	2.650e^-5	0.701	UPSTREAM MRP INTRON CG5792	TF binding site mE1_TFBS_Trl
3L	17761638	3L_17761638_SNP [dm3] 3L_17768538_SNP [dm6]	T	C	2.655e^-5	0.701	INTERGENIC
2L	7770820	2L_7770820_SNP [dm3] 2L_7770820_SNP [dm6]	C	A	2.746e^-5	0.701	INTRON CG7191
2L	7143603	2L_7143603_SNP [dm3] 2L_7143603_SNP [dm6]	C	G	2.782e^-5	0.701	INTRON Pvf3 EXON CR44612	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	7143617	2L_7143617_SNP [dm3] 2L_7143617_SNP [dm6]	A	G	2.792e^-5	0.701	INTRON Pvf3 EXON CR44612	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10567394	3L_10567394_SNP [dm3] 3L_10574294_SNP [dm6]	A	G	2.807e^-5	0.701	INTRON A2bp1
2L	13726779	2L_13726779_SNP [dm3] 2L_13726779_SNP [dm6]	C	T	2.826e^-5	0.701	INTERGENIC
2L	13726781	2L_13726781_SNP [dm3] 2L_13726781_SNP [dm6]	G	A	2.826e^-5	0.701	INTERGENIC
2R	19425848	2R_19425848_SNP [dm3] 2R_23538325_SNP [dm6]	C	T	2.862e^-5	0.701	UTR_5_PRIME bw DOWNSTREAM ppk3	TF binding site mE1_TFBS_chinmo
3L	4981119	3L_4981119_SNP [dm3] 3L_4981119_SNP [dm6]	A	G	2.926e^-5	0.701	UPSTREAM CG17030 INTRON Con EXON CR45685	TF binding site mE1_TFBS_HSA
2L	12798899	2L_12798899_SNP [dm3] 2L_12798899_SNP [dm6]	G	A	3.011e^-5	0.701	INTERGENIC
3R	21535190	3R_21535190_SNP [dm3] 3R_25709468_SNP [dm6]	A	G	3.028e^-5	0.701	SYNONYMOUS_CODING LpR2 INTRON LpR2
3R	9674345	3R_9674345_SNP [dm3] 3R_13848623_SNP [dm6]	C	G	3.035e^-5	0.701	INTERGENIC	TF binding site mE1_TFBS_cad
2L	18301140	2L_18301140_SNP [dm3] 2L_18301140_SNP [dm6]	T	G	3.079e^-5	0.701	INTERGENIC
3L	9481360	3L_9481360_SNP [dm3] 3L_9488260_SNP [dm6]	C	A	3.159e^-5	0.701	UPSTREAM pall INTRON CG32036	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	17805283	3L_17805283_SNP [dm3] 3L_17812183_SNP [dm6]	T	A	3.164e^-5	0.701	INTRON cln3
3L	2916177	3L_2916177_SNP [dm3] 3L_2916177_SNP [dm6]	T	C	3.250e^-5	0.701	NON_SYNONYMOUS_CODING CG9970 INTRON Shab
2L	13356149	2L_13356149_SNP [dm3] 2L_13356149_SNP [dm6]	T	G	3.270e^-5	0.701	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	8762147	X_8762147_SNP [dm3] X_8868114_SNP [dm6]	C	A	3.330e^-5	0.701	SYNONYMOUS_CODING CG12075	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	5527873	3L_5527873_SNP [dm3] 3L_5534773_SNP [dm6]	G	C	3.334e^-5	0.701	UTR_3_PRIME CG13285 INTRON CG13285
2L	16499919	2L_16499919_SNP [dm3] 2L_16499919_SNP [dm6]	A	T	3.347e^-5	0.701	INTRON Tpr2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2L	12798890	2L_12798890_SNP [dm3] 2L_12798890_SNP [dm6]	A	T	3.350e^-5	0.701	INTERGENIC
X	10452013	X_10452013_SNP [dm3] X_10557980_SNP [dm6]	A	C	3.422e^-5	0.701	UPSTREAM spri INTRON spri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	2078894	3R_2078894_SNP [dm3] 3R_6253172_SNP [dm6]	G	A	3.423e^-5	0.701	INTERGENIC
2R	11909492	2R_11909492_SNP [dm3] 2R_16021987_SNP [dm6]	A	C	3.462e^-5	0.701	SYNONYMOUS_CODING CG8399
2L	18300912	2L_18300912_SNP [dm3] 2L_18300912_SNP [dm6]	T	C	3.483e^-5	0.701	INTERGENIC	TF binding site mE1_TFBS_sens
X	10436856	X_10436856_SNP [dm3] X_10542823_SNP [dm6]	G	T	3.588e^-5	0.701	INTRON spri
2L	7770846	2L_7770846_SNP [dm3] 2L_7770846_SNP [dm6]	G	C	3.620e^-5	0.701	INTRON CG7191
2L	12798898	2L_12798898_SNP [dm3] 2L_12798898_SNP [dm6]	C	T	3.624e^-5	0.701	INTERGENIC
3L	22203321	3L_22203321_SNP [dm3] 3L_22210221_SNP [dm6]	A	C	3.630e^-5	0.701	INTRON olf413	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	17757268	3L_17757268_SNP [dm3] 3L_17764168_SNP [dm6]	A	C	3.709e^-5	0.701	UPSTREAM Adgf-A & 1 other INTERGENIC	TF binding site mE1_TFBS_Trl
2L	19818318	2L_19818318_SNP [dm3] 2L_19818318_SNP [dm6]	A	G	3.738e^-5	0.701	INTRON sick	transposable element FlyBase
3R	24747699	3R_24747699_SNP [dm3] 3R_28921977_SNP [dm6]	C	T	3.766e^-5	0.701	UTR_3_PRIME Doa DOWNSTREAM Doa	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	9446299	X_9446299_SNP [dm3] X_9552266_SNP [dm6]	A	T	3.792e^-5	0.701	SYNONYMOUS_CODING l_1_G0320	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	19676166	2L_19676166_SNP [dm3] 2L_19676166_SNP [dm6]	A	G	3.851e^-5	0.701	INTRON Lar
2L	11644034	2L_11644034_SNP [dm3] 2L_11644034_SNP [dm6]	T	A	3.857e^-5	0.701	DOWNSTREAM CG6614 INTERGENIC
2L	14627196	2L_14627196_SNP [dm3] 2L_14627196_SNP [dm6]	C	T	3.871e^-5	0.701	INTRON osp	TF binding site BDTNP1_TFBS_dl
2L	18302714	2L_18302714_SNP [dm3] 2L_18302714_SNP [dm6]	T	G	3.875e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	11083549	3R_11083549_DEL [dm3] 3R_15257827_DEL [dm6]	TT	T	3.891e^-5	0.701	DOWNSTREAM eIF-2gamma & 1 other INTERGENIC
2L	14700420	2L_14700420_SNP [dm3] 2L_14700420_SNP [dm6]	T	C	3.936e^-5	0.701	INTERGENIC
X	7425090	X_7425090_SNP [dm3] X_7531057_SNP [dm6]	C	T	3.937e^-5	0.701	INTRON CG32719
3L	9330781	3L_9330781_SNP [dm3] 3L_9337681_SNP [dm6]	T	G	3.945e^-5	0.701	INTRON PGRP-LA
2L	4388974	2L_4388974_SNP [dm3] 2L_4388974_SNP [dm6]	C	T	3.984e^-5	0.701	INTRON Tps1
3R	8728881	3R_8728881_SNP [dm3] 3R_12903159_SNP [dm6]	A	T	4.124e^-5	0.701	INTERGENIC
3R	11705273	3R_11705273_SNP [dm3] 3R_15879551_SNP [dm6]	C	G	4.171e^-5	0.701	INTERGENIC
2L	18302683	2L_18302683_SNP [dm3] 2L_18302683_SNP [dm6]	G	C	4.196e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
X	2700983	X_2700983_SNP [dm3] X_2806950_SNP [dm6]	G	A	4.242e^-5	0.701	INTRON kirre
2L	18302869	2L_18302869_SNP [dm3] 2L_18302869_SNP [dm6]	A	C	4.282e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
X	11349981	X_11349981_SNP [dm3] X_11455948_SNP [dm6]	C	A	4.326e^-5	0.701	NON_SYNONYMOUS_CODING HP5	TF binding site mE1_TFBS_sens
2L	7770853	2L_7770853_MNP [dm3] 2L_7770853_MNP [dm6]	ACA	GAG	4.377e^-5	0.701	INTRON CG7191
3R	3601856	3R_3601856_SNP [dm3] 3R_7776134_SNP [dm6]	C	T	4.385e^-5	0.701	INTERGENIC
3L	3496731	3L_3496731_SNP [dm3] 3L_3496731_SNP [dm6]	A	T	4.414e^-5	0.701	INTRON CG42324
X	1963351	X_1963351_SNP [dm3] X_2069318_SNP [dm6]	C	T	4.454e^-5	0.701	SYNONYMOUS_CODING CG4194 INTRON CG4199	TF binding site BDTNP1_TFBS_da mE1_TFBS_cnc mE1_TFBS_HSA
3R	2835645	3R_2835645_SNP [dm3] 3R_7009923_SNP [dm6]	A	G	4.475e^-5	0.701	INTERGENIC
3L	8991169	3L_8991169_SNP [dm3] 3L_8998069_SNP [dm6]	C	T	4.487e^-5	0.701	UPSTREAM smg & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA
2L	6566390	2L_6566390_SNP [dm3] 2L_6566390_SNP [dm6]	T	A	4.513e^-5	0.701	UPSTREAM CG13766 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	9620819	3L_9620819_SNP [dm3] 3L_9627719_SNP [dm6]	A	T	4.563e^-5	0.701	UPSTREAM CG8336 DOWNSTREAM CG3335 INTRON Or67b
2R	14852923	2R_14852923_SNP [dm3] 2R_18965418_SNP [dm6]	A	T	4.622e^-5	0.701	INTERGENIC	TF binding site mE1_TFBS_cnc
2L	12720595	2L_12720595_SNP [dm3] 2L_12720595_SNP [dm6]	G	T	4.679e^-5	0.701	INTRON CG5792 & 1 other	TF binding site mE1_TFBS_cad
3L	10464132	3L_10464132_SNP [dm3] 3L_10471032_SNP [dm6]	A	G	4.702e^-5	0.701	INTERGENIC
2L	12779992	2L_12779992_SNP [dm3] 2L_12779992_SNP [dm6]	C	T	4.779e^-5	0.701	INTERGENIC
3L	22228780	3L_22228780_SNP [dm3] 3L_22235680_SNP [dm6]	G	C	4.844e^-5	0.701	INTRON olf413
3L	2488448	3L_2488448_SNP [dm3] 3L_2488448_SNP [dm6]	G	A	4.859e^-5	0.701	UPSTREAM CG1146 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	3929041	2L_3929041_SNP [dm3] 2L_3929041_SNP [dm6]	G	A	4.904e^-5	0.701	INTRON fred
2L	18301822	2L_18301822_SNP [dm3] 2L_18301822_SNP [dm6]	A	G	4.934e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	18301778	2L_18301778_SNP [dm3] 2L_18301778_SNP [dm6]	A	C	4.951e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	12779996	2L_12779996_SNP [dm3] 2L_12779996_SNP [dm6]	G	C	4.953e^-5	0.701	INTERGENIC
3L	2121870	3L_2121870_SNP [dm3] 3L_2121870_SNP [dm6]	T	A	5.008e^-5	0.701	DOWNSTREAM zormin INTRON zormin	TF binding site BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
2L	18298775	2L_18298775_SNP [dm3] 2L_18298775_SNP [dm6]	T	G	5.043e^-5	0.701	INTERGENIC	TF binding site mE1_TFBS_inv
2L	7270737	2L_7270737_SNP [dm3] 2L_7270737_SNP [dm6]	T	C	5.143e^-5	0.701	INTRON Wnt4
X	18418964	X_18418964_SNP [dm3] X_18524931_SNP [dm6]	T	G	5.152e^-5	0.701	INTRON Bx
X	20885779	X_20885779_SNP [dm3] X_21014752_SNP [dm6]	C	T	5.209e^-5	0.701	INTERGENIC
2L	13726774	2L_13726774_SNP [dm3] 2L_13726774_SNP [dm6]	C	A	5.321e^-5	0.701	INTERGENIC
3L	7235907	3L_7235907_SNP [dm3] 3L_7242807_SNP [dm6]	G	A	5.351e^-5	0.701	SYNONYMOUS_CODING Neos DOWNSTREAM mRpL50	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7033252	3L_7033252_SNP [dm3] 3L_7040152_SNP [dm6]	G	A	5.419e^-5	0.701	INTRON Mp
X	17248700	X_17248700_SNP [dm3] X_17354667_SNP [dm6]	G	C	5.487e^-5	0.701	INTERGENIC
X	19881075	X_19881075_SNP [dm3] X_19987042_SNP [dm6]	C	G	5.518e^-5	0.701	INTERGENIC
3R	14310094	3R_14310094_SNP [dm3] 3R_18484372_SNP [dm6]	T	C	5.528e^-5	0.701	INTRON fru
3L	11052787	3L_11052787_SNP [dm3] 3L_11059687_SNP [dm6]	C	T	5.528e^-5	0.701	NON_SYNONYMOUS_CODING CG6321 DOWNSTREAM CG7888
X	8473492	X_8473492_SNP [dm3] X_8579459_SNP [dm6]	G	C	5.557e^-5	0.701	INTRON CG12065
2L	14627182	2L_14627182_SNP [dm3] 2L_14627182_SNP [dm6]	G	A	5.588e^-5	0.701	INTRON osp	TF binding site BDTNP1_TFBS_dl
2R	9640797	2R_9640797_SNP [dm3] 2R_13753292_SNP [dm6]	A	G	5.608e^-5	0.701	UPSTREAM CG6280 INTERGENIC
2L	3376859	2L_3376859_SNP [dm3] 2L_3376859_SNP [dm6]	A	T	5.628e^-5	0.701	UPSTREAM Ptpa & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
2L	12798904	2L_12798904_SNP [dm3] 2L_12798904_SNP [dm6]	C	T	5.631e^-5	0.701	INTERGENIC
3R	14310092	3R_14310092_INS [dm3] 3R_18484370_INS [dm6]	A	AATTCC	5.638e^-5	0.701	INTRON fru
2L	10468579	2L_10468579_SNP [dm3] 2L_10468579_SNP [dm6]	T	C	5.703e^-5	0.701	INTRON RluA-1
X	4334096	X_4334096_SNP [dm3] X_4440063_SNP [dm6]	T	C	5.718e^-5	0.701	INTRON CR32773 & 1 other	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
X	3852369	X_3852369_SNP [dm3] X_3958336_SNP [dm6]	G	A	5.840e^-5	0.701	NON_SYNONYMOUS_CODING lva	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10375874	2L_10375874_SNP [dm3] 2L_10375874_SNP [dm6]	T	A	5.866e^-5	0.701	UPSTREAM dpr19 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
2L	6565965	2L_6565965_SNP [dm3] 2L_6565965_SNP [dm6]	A	G	5.897e^-5	0.701	SYNONYMOUS_CODING CG13766	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA
3R	21535245	3R_21535245_SNP [dm3] 3R_25709523_SNP [dm6]	G	A	5.922e^-5	0.701	SPLICE_SITE_REGION LpR2 INTRON LpR2
X	8348824	X_8348824_SNP [dm3] X_8454791_SNP [dm6]	A	C	6.003e^-5	0.701	UTR_5_PRIME org-1	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	14626252	2L_14626252_SNP [dm3] 2L_14626252_SNP [dm6]	A	G	6.058e^-5	0.701	INTRON osp
3L	9160934	3L_9160934_SNP [dm3] 3L_9167834_SNP [dm6]	T	C	6.064e^-5	0.701	INTRON Rdl
2L	4133923	2L_4133923_SNP [dm3] 2L_4133923_SNP [dm6]	A	G	6.094e^-5	0.701	INTERGENIC
3L	2738477	3L_2738477_SNP [dm3] 3L_2738477_SNP [dm6]	G	A	6.116e^-5	0.701	INTRON Mrtf
X	18737145	X_18737145_SNP [dm3] X_18843112_SNP [dm6]	A	T	6.200e^-5	0.701	UPSTREAM CG34422 DOWNSTREAM Pvf1 INTERGENIC
3L	14901556	3L_14901556_SNP [dm3] 3L_14908456_SNP [dm6]	C	T	6.235e^-5	0.701	INTRON DCX-EMAP	TF binding site BDTNP1_TFBS_twi
3L	1386119	3L_1386119_SNP [dm3] 3L_1386119_SNP [dm6]	G	C	6.244e^-5	0.701	INTRON Ptp61F & 1 other	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
2L	19614904	2L_19614904_SNP [dm3] 2L_19614904_SNP [dm6]	C	T	6.386e^-5	0.701	INTRON Lar
2L	9634016	2L_9634016_SNP [dm3] 2L_9634016_SNP [dm6]	A	C	6.419e^-5	0.701	UPSTREAM Apoltp INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
3L	20926413	3L_20926413_SNP [dm3] 3L_20933313_SNP [dm6]	A	G	6.480e^-5	0.701	INTRON fng	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18302524	2L_18302524_SNP [dm3] 2L_18302524_SNP [dm6]	G	A	6.514e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	16403215	X_16403215_SNP [dm3] X_16509182_SNP [dm6]	C	T	6.538e^-5	0.701	INTRON para
3L	819186	3L_819186_DEL [dm3] 3L_819186_DEL [dm6]	ACATATTG	A	6.544e^-5	0.701	INTERGENIC
X	4333776	X_4333776_SNP [dm3] X_4439743_SNP [dm6]	A	G	6.556e^-5	0.701	INTRON CR32773 & 1 other	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
X	7908491	X_7908491_SNP [dm3] X_8014458_SNP [dm6]	C	G	6.562e^-5	0.701	INTRON Tbh
3L	3855128	3L_3855128_SNP [dm3] 3L_3855128_SNP [dm6]	G	A	6.584e^-5	0.701	INTRON Awh	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
3L	9330783	3L_9330783_DEL [dm3] 3L_9337683_DEL [dm6]	TG	C	6.606e^-5	0.701	INTRON PGRP-LA
3R	14455053	3R_14455053_SNP [dm3] 3R_18629331_SNP [dm6]	A	G	6.626e^-5	0.701	UTR_3_PRIME CG14301 UPSTREAM tRNA:CR31228 INTRON qin
2L	6803897	2L_6803897_SNP [dm3] 2L_6803897_SNP [dm6]	T	A	6.640e^-5	0.701	DOWNSTREAM CG17375 INTRON CG11236	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2R	15435917	2R_15435917_SNP [dm3] 2R_19548412_SNP [dm6]	C	T	6.679e^-5	0.701	INTRON sm
3L	9160930	3L_9160930_SNP [dm3] 3L_9167830_SNP [dm6]	T	C	6.694e^-5	0.701	INTRON Rdl
X	4334888	X_4334888_SNP [dm3] X_4440855_SNP [dm6]	C	G	6.763e^-5	0.701	INTRON CR32773 & 1 other	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
3L	5264423	3L_5264423_SNP [dm3] 3L_5271323_SNP [dm6]	A	C	6.768e^-5	0.701	INTRON shep
2L	18304935	2L_18304935_SNP [dm3] 2L_18304935_SNP [dm6]	G	C	6.796e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	13354985	2L_13354985_SNP [dm3] 2L_13354985_SNP [dm6]	G	C	6.802e^-5	0.701	UTR_5_PRIME CG9395	TF binding site mE1_TFBS_Trl
2L	18302678	2L_18302678_SNP [dm3] 2L_18302678_SNP [dm6]	T	C	6.857e^-5	0.701	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	23720639	3R_23720639_SNP [dm3] 3R_27894917_SNP [dm6]	A	G	6.863e^-5	0.701	INTRON CG34353
2L	19614905	2L_19614905_SNP [dm3] 2L_19614905_SNP [dm6]	C	T	6.897e^-5	0.701	INTRON Lar
3R	10047139	3R_10047139_SNP [dm3] 3R_14221417_SNP [dm6]	T	C	6.900e^-5	0.701	NON_SYNONYMOUS_CODING CG33109 DOWNSTREAM Sp212
2L	4692310	2L_4692310_SNP [dm3] 2L_4692310_SNP [dm6]	C	T	6.918e^-5	0.701	INTERGENIC
3L	17769329	3L_17769329_SNP [dm3] 3L_17776229_SNP [dm6]	T	G	6.945e^-5	0.701	INTERGENIC
3L	11359066	3L_11359066_SNP [dm3] 3L_11365966_SNP [dm6]	T	G	6.948e^-5	0.701	DOWNSTREAM CR45036 INTERGENIC	TF binding site mE1_TFBS_cad
3L	12721417	3L_12721417_SNP [dm3] 3L_12728317_SNP [dm6]	A	G	7.064e^-5	0.702	INTERGENIC
X	7543969	X_7543969_SNP [dm3] X_7649936_SNP [dm6]	C	T	7.071e^-5	0.702	INTRON ct
3L	19092722	3L_19092722_SNP [dm3] 3L_19099622_SNP [dm6]	G	T	7.093e^-5	0.702	SYNONYMOUS_CODING Gem2 DOWNSTREAM CG14079	TF binding site mE1_TFBS_cad
3L	8549222	3L_8549222_SNP [dm3] 3L_8556122_SNP [dm6]	A	G	7.122e^-5	0.702	INTRON rhea
3L	18377358	3L_18377358_SNP [dm3] 3L_18384258_SNP [dm6]	A	T	7.311e^-5	0.702	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	18272781	X_18272781_SNP [dm3] X_18378748_SNP [dm6]	A	G	7.339e^-5	0.702	SYNONYMOUS_CODING por DOWNSTREAM CrebB	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	13809491	X_13809491_SNP [dm3] X_13915458_SNP [dm6]	A	C	7.356e^-5	0.702	INTRON mamo
2L	18299813	2L_18299813_SNP [dm3] 2L_18299813_SNP [dm6]	C	A	7.374e^-5	0.702	INTERGENIC
2L	18302532	2L_18302532_SNP [dm3] 2L_18302532_SNP [dm6]	T	A	7.388e^-5	0.702	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3L	18033144	3L_18033144_SNP [dm3] 3L_18040044_SNP [dm6]	A	T	7.408e^-5	0.702	UPSTREAM CG32192 INTRON Eip75B
3L	12058725	3L_12058725_SNP [dm3] 3L_12065625_SNP [dm6]	A	G	7.427e^-5	0.702	UPSTREAM rols INTERGENIC
2L	18302591	2L_18302591_SNP [dm3] 2L_18302591_SNP [dm6]	A	G	7.466e^-5	0.702	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2R	5385245	2R_5385245_SNP [dm3] 2R_9497740_SNP [dm6]	A	G	7.484e^-5	0.702	INTRON Wnt2	TF binding site mE1_TFBS_chinmo
X	3853967	X_3853967_SNP [dm3] X_3959934_SNP [dm6]	A	G	7.552e^-5	0.702	SYNONYMOUS_CODING lva	TF binding site mE1_TFBS_chinmo
3L	2036552	3L_2036552_SNP [dm3] 3L_2036552_SNP [dm6]	C	T	7.580e^-5	0.702	DOWNSTREAM CG42355 INTERGENIC
X	10436823	X_10436823_SNP [dm3] X_10542790_SNP [dm6]	C	T	7.598e^-5	0.702	INTRON spri
3L	9330399	3L_9330399_SNP [dm3] 3L_9337299_SNP [dm6]	C	A	7.612e^-5	0.702	INTRON PGRP-LA
X	21986911	X_21986911_SNP [dm3] X_22585075_SNP [dm6]	T	C	7.679e^-5	0.702	INTRON Cda4
3L	12864506	3L_12864506_SNP [dm3] 3L_12871406_SNP [dm6]	A	T	7.716e^-5	0.702	INTERGENIC
X	4200400	X_4200400_SNP [dm3] X_4306367_SNP [dm6]	A	T	7.734e^-5	0.702	INTERGENIC
3L	3496807	3L_3496807_SNP [dm3] 3L_3496807_SNP [dm6]	G	C	7.784e^-5	0.702	INTRON CG42324
2L	11111266	2L_11111266_SNP [dm3] 2L_11111266_SNP [dm6]	G	A	7.787e^-5	0.702	SYNONYMOUS_CODING CG6201 DOWNSTREAM l_2_gd1	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	22905995	3R_22905995_SNP [dm3] 3R_27080273_SNP [dm6]	C	A	7.827e^-5	0.702	INTRON CG14257
2L	13459247	2L_13459247_SNP [dm3] 2L_13459247_SNP [dm6]	A	G	7.951e^-5	0.707	UPSTREAM CR45684 & 1 other INTRON CG42784
2L	6565986	2L_6565986_SNP [dm3] 2L_6565986_SNP [dm6]	C	G	7.951e^-5	0.707	SYNONYMOUS_CODING CG13766	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	12779960	2L_12779960_SNP [dm3] 2L_12779960_SNP [dm6]	C	T	8.056e^-5	0.709	INTERGENIC
3L	4981165	3L_4981165_SNP [dm3] 3L_4981165_SNP [dm6]	C	T	8.072e^-5	0.709	UPSTREAM CG17030 INTRON Con EXON CR45685	TF binding site mE1_TFBS_HSA
2L	2124857	2L_2124857_SNP [dm3] 2L_2124857_SNP [dm6]	C	A	8.109e^-5	0.709	INTERGENIC
2L	19209421	2L_19209421_SNP [dm3] 2L_19209421_SNP [dm6]	A	G	8.179e^-5	0.709	DOWNSTREAM drl INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	20900429	X_20900429_SNP [dm3] X_21029402_SNP [dm6]	G	T	8.212e^-5	0.709	UTR_3_PRIME CG1529 DOWNSTREAM CG1529	transposable element FlyBase
2L	12721998	2L_12721998_SNP [dm3] 2L_12721998_SNP [dm6]	A	T	8.228e^-5	0.709	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
3L	11052839	3L_11052839_SNP [dm3] 3L_11059739_SNP [dm6]	C	T	8.242e^-5	0.709	SYNONYMOUS_CODING CG6321 DOWNSTREAM CG7888
X	3998578	X_3998578_SNP [dm3] X_4104545_SNP [dm6]	T	C	8.368e^-5	0.711	SYNONYMOUS_CODING brn UPSTREAM Xpac	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	21842683	3L_21842683_SNP [dm3] 3L_21849583_SNP [dm6]	G	C	8.402e^-5	0.711	INTRON mub
2L	10905484	2L_10905484_SNP [dm3] 2L_10905484_SNP [dm6]	T	A	8.426e^-5	0.711	DOWNSTREAM CG7309 INTERGENIC	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA
3R	16470703	3R_16470703_SNP [dm3] 3R_20644981_SNP [dm6]	A	C	8.465e^-5	0.711	DOWNSTREAM Lrrk INTRON GluRIIE
3L	14910332	3L_14910332_SNP [dm3] 3L_14917232_SNP [dm6]	A	G	8.471e^-5	0.711	INTRON DCX-EMAP
3R	6363857	3R_6363857_SNP [dm3] 3R_10538135_SNP [dm6]	A	C	8.521e^-5	0.711	INTRON hth	enhancer mE1_CBP_Enhancers
X	9107190	X_9107190_SNP [dm3] X_9213157_SNP [dm6]	A	G	8.533e^-5	0.711	INTERGENIC
3R	15629747	3R_15629747_SNP [dm3] 3R_19804025_SNP [dm6]	G	A	8.621e^-5	0.715	INTRON bnl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	14246790	3L_14246790_SNP [dm3] 3L_14253690_SNP [dm6]	G	T	8.837e^-5	0.724	INTERGENIC	TF binding site mE1_TFBS_cnc
3L	9160022	3L_9160022_SNP [dm3] 3L_9166922_SNP [dm6]	A	T	8.842e^-5	0.724	INTRON Rdl
3R	9771406	3R_9771406_SNP [dm3] 3R_13945684_SNP [dm6]	G	C	8.867e^-5	0.724	SYNONYMOUS_CODING Art6	TF binding site mE1_TFBS_chinmo
2L	18300970	2L_18300970_SNP [dm3] 2L_18300970_SNP [dm6]	C	G	8.876e^-5	0.724	INTERGENIC	TF binding site mE1_TFBS_sens
3L	2633400	3L_2633400_SNP [dm3] 3L_2633400_SNP [dm6]	T	A	8.992e^-5	0.729	INTRON MEP-1 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	19708647	2R_19708647_SNP [dm3] 2R_23821124_SNP [dm6]	A	T	9.015e^-5	0.729	INTRON CG5549	TF binding site mE1_TFBS_chinmo
3L	1998910	3L_1998910_SNP [dm3] 3L_1998910_SNP [dm6]	C	A	9.056e^-5	0.729	INTERGENIC
X	10436488	X_10436488_SNP [dm3] X_10542455_SNP [dm6]	G	A	9.101e^-5	0.729	INTRON spri
3L	22175377	3L_22175377_SNP [dm3] 3L_22182277_SNP [dm6]	T	G	9.156e^-5	0.731	INTRON olf413	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	3854482	X_3854482_SNP [dm3] X_3960449_SNP [dm6]	G	C	9.347e^-5	0.743	INTRON lva	TF binding site mE1_TFBS_chinmo
3L	14901497	3L_14901497_SNP [dm3] 3L_14908397_SNP [dm6]	C	T	9.501e^-5	0.75	INTRON DCX-EMAP	TF binding site BDTNP1_TFBS_twi
2R	7659866	2R_7659866_SNP [dm3] 2R_11772361_SNP [dm6]	C	T	9.516e^-5	0.75	INTRON ths
3L	10208723	3L_10208723_SNP [dm3] 3L_10215623_SNP [dm6]	T	C	9.605e^-5	0.75	UPSTREAM CG8065 INTERGENIC
X	8473505	X_8473505_SNP [dm3] X_8579472_SNP [dm6]	A	G	9.676e^-5	0.75	INTRON CG12065
X	7634198	X_7634198_INS [dm3] X_7740165_INS [dm6]	G	GCTGGATG	9.713e^-5	0.75	DOWNSTREAM Tom40 INTERGENIC	TF binding site BDTNP1_TFBS_hb
3R	23836075	3R_23836075_SNP [dm3] 3R_28010353_SNP [dm6]	T	A	9.851e^-5	0.75	INTERGENIC
2L	13726764	2L_13726764_SNP [dm3] 2L_13726764_SNP [dm6]	G	T	9.866e^-5	0.75	INTERGENIC
2L	14567077	2L_14567077_SNP [dm3] 2L_14567077_SNP [dm6]	A	G	9.883e^-5	0.75	INTERGENIC
3L	17780211	3L_17780211_SNP [dm3] 3L_17787111_SNP [dm6]	C	A	1.002e^-4	0.75	INTERGENIC
3R	19825339	3R_19825339_SNP [dm3] 3R_23999617_SNP [dm6]	C	T	1.010e^-4	0.75	INTRON KrT95D	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	9481355	3L_9481355_SNP [dm3] 3L_9488255_SNP [dm6]	A	G	1.017e^-4	0.75	UPSTREAM pall INTRON CG32036	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA
X	16748083	X_16748083_SNP [dm3] X_16854050_SNP [dm6]	C	G	1.026e^-4	0.75	UPSTREAM CG13003 INTRON CG13003
3L	12058758	3L_12058758_SNP [dm3] 3L_12065658_SNP [dm6]	T	G	1.026e^-4	0.75	UPSTREAM rols INTERGENIC
X	10934116	X_10934116_SNP [dm3] X_11040083_SNP [dm6]	G	C	1.027e^-4	0.75	UPSTREAM CG42339 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12765149	2L_12765149_SNP [dm3] 2L_12765149_SNP [dm6]	A	G	1.028e^-4	0.75	INTERGENIC
3L	9160473	3L_9160473_SNP [dm3] 3L_9167373_SNP [dm6]	G	T	1.033e^-4	0.75	INTRON Rdl
3L	8973636	3L_8973636_SNP [dm3] 3L_8980536_SNP [dm6]	A	G	1.034e^-4	0.75	UPSTREAM CG5644 INTERGENIC
2R	19426061	2R_19426061_SNP [dm3] 2R_23538538_SNP [dm6]	C	G	1.040e^-4	0.75	UPSTREAM bw DOWNSTREAM ppk3 INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	13726762	2L_13726762_SNP [dm3] 2L_13726762_SNP [dm6]	T	C	1.043e^-4	0.75	INTERGENIC
X	4434810	X_4434810_SNP [dm3] X_4540777_SNP [dm6]	T	C	1.047e^-4	0.75	UPSTREAM CHOp24 & 1 other INTRON CR32773	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA
2L	10080560	2L_10080560_SNP [dm3] 2L_10080560_SNP [dm6]	C	T	1.051e^-4	0.75	INTRON CG44153
3L	11057228	3L_11057228_SNP [dm3] 3L_11064128_SNP [dm6]	A	G	1.053e^-4	0.75	SYNONYMOUS_CODING CG32075 UPSTREAM SuUR & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2R	19708623	2R_19708623_SNP [dm3] 2R_23821100_SNP [dm6]	C	T	1.053e^-4	0.75	INTRON CG5549	TF binding site mE1_TFBS_chinmo
X	7527853	X_7527853_DEL [dm3] X_7633820_DEL [dm6]	TT	T	1.056e^-4	0.75	INTRON ct
3L	14246711	3L_14246711_SNP [dm3] 3L_14253611_SNP [dm6]	G	T	1.056e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cnc
2L	9312402	2L_9312402_SNP [dm3] 2L_9312402_SNP [dm6]	C	G	1.058e^-4	0.75	INTERGENIC
3L	9620770	3L_9620770_SNP [dm3] 3L_9627670_SNP [dm6]	C	A	1.066e^-4	0.75	SYNONYMOUS_CODING Or67b DOWNSTREAM CG3335
X	4333796	X_4333796_SNP [dm3] X_4439763_SNP [dm6]	G	A	1.068e^-4	0.75	INTRON CR32773 & 1 other	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
2L	10080551	2L_10080551_SNP [dm3] 2L_10080551_SNP [dm6]	A	C	1.070e^-4	0.75	INTRON CG44153
2L	4103170	2L_4103170_SNP [dm3] 2L_4103170_SNP [dm6]	G	A	1.070e^-4	0.75	INTRON ed
X	16661262	X_16661262_SNP [dm3] X_16767229_SNP [dm6]	C	G	1.076e^-4	0.75	INTRON if
3L	17760443	3L_17760443_SNP [dm3] 3L_17767343_SNP [dm6]	T	A	1.081e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_inv
2L	12800142	2L_12800142_DEL [dm3] 2L_12800142_DEL [dm6]	GC	G	1.084e^-4	0.75	INTERGENIC
3L	9330797	3L_9330797_SNP [dm3] 3L_9337697_SNP [dm6]	A	G	1.091e^-4	0.75	INTRON PGRP-LA
3L	1751888	3L_1751888_SNP [dm3] 3L_1751888_SNP [dm6]	C	T	1.115e^-4	0.75	UTR_3_PRIME CG13921 DOWNSTREAM Cht2
X	20900406	X_20900406_SNP [dm3] X_21029379_SNP [dm6]	C	T	1.121e^-4	0.75	UTR_3_PRIME CG1529 DOWNSTREAM CG1529	transposable element FlyBase
3L	13038897	3L_13038897_DEL [dm3] 3L_13045797_DEL [dm6]	TGATAAGT	T	1.125e^-4	0.75	INTRON Syx13	TF binding site mE1_TFBS_HSA
2L	13946198	2L_13946198_SNP [dm3] 2L_13946198_SNP [dm6]	G	T	1.130e^-4	0.75	INTRON Ance-3 & 1 other
X	16401587	X_16401587_SNP [dm3] X_16507554_SNP [dm6]	T	C	1.138e^-4	0.75	INTRON para
3L	2039130	3L_2039130_SNP [dm3] 3L_2039130_SNP [dm6]	G	A	1.139e^-4	0.75	UPSTREAM CG42355 DOWNSTREAM sls INTERGENIC
2L	18867469	2L_18867469_SNP [dm3] 2L_18867469_SNP [dm6]	A	G	1.145e^-4	0.75	UPSTREAM mir-4946 INTRON tup	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10561289	3L_10561289_SNP [dm3] 3L_10568189_SNP [dm6]	C	G	1.149e^-4	0.75	NON_SYNONYMOUS_CODING A2bp1 INTRON A2bp1
3L	3486785	3L_3486785_SNP [dm3] 3L_3486785_SNP [dm6]	C	T	1.156e^-4	0.75	INTRON CG42324
X	9554896	X_9554896_SNP [dm3] X_9660863_SNP [dm6]	G	A	1.162e^-4	0.75	INTRON CG3106
3L	22175386	3L_22175386_SNP [dm3] 3L_22182286_SNP [dm6]	C	T	1.163e^-4	0.75	INTRON olf413	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	8982793	3L_8982793_SNP [dm3] 3L_8989693_SNP [dm6]	T	C	1.163e^-4	0.75	SYNONYMOUS_CODING CG5280 DOWNSTREAM CG5068 & 1 other
2L	4859256	2L_4859256_SNP [dm3] 2L_4859256_SNP [dm6]	C	T	1.167e^-4	0.75	INTRON pog
3R	9771698	3R_9771698_SNP [dm3] 3R_13945976_SNP [dm6]	G	A	1.167e^-4	0.75	UPSTREAM Art6 INTERGENIC
2L	6801966	2L_6801966_SNP [dm3] 2L_6801966_SNP [dm6]	G	C	1.171e^-4	0.75	SYNONYMOUS_CODING CG17377 INTRON CG17377	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3484806	3L_3484806_SNP [dm3] 3L_3484806_SNP [dm6]	A	C	1.179e^-4	0.75	UPSTREAM CG43074 & 1 other INTRON CG42324
3L	11358982	3L_11358982_SNP [dm3] 3L_11365882_SNP [dm6]	A	G	1.184e^-4	0.75	UPSTREAM CG6163 EXON CR45036	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	21081973	2L_21081973_SNP [dm3] 2L_21081973_SNP [dm6]	T	G	1.188e^-4	0.75	NON_SYNONYMOUS_CODING CG33511 DOWNSTREAM tadr & 1 other
X	7423886	X_7423886_SNP [dm3] X_7529853_SNP [dm6]	A	G	1.188e^-4	0.75	INTRON CG32719
3L	21037359	3L_21037359_DEL [dm3] 3L_21044259_DEL [dm6]	CG	C	1.189e^-4	0.75	INTRON siz	TF binding site mE1_TFBS_sens
3L	22161210	3L_22161210_SNP [dm3] 3L_22168110_SNP [dm6]	G	C	1.200e^-4	0.75	INTRON olf413
2L	17450476	2L_17450476_INS [dm3] 2L_17450476_INS [dm6]	C	CC	1.203e^-4	0.75	UPSTREAM dl INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
3L	11359840	3L_11359840_SNP [dm3] 3L_11366740_SNP [dm6]	G	T	1.206e^-4	0.75	DOWNSTREAM CR45036 INTERGENIC	TF binding site mE1_TFBS_inv
2R	12128377	2R_12128377_SNP [dm3] 2R_16240872_SNP [dm6]	T	A	1.214e^-4	0.75	UPSTREAM krimp DOWNSTREAM CG15708 INTERGENIC
2L	10375919	2L_10375919_SNP [dm3] 2L_10375919_SNP [dm6]	A	T	1.218e^-4	0.75	UPSTREAM dpr19 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	18275232	2L_18275232_SNP [dm3] 2L_18275232_SNP [dm6]	G	A	1.218e^-4	0.75	INTRON CG42750
2R	14428238	2R_14428238_DEL [dm3] 2R_18540733_DEL [dm6]	GAGG	T	1.223e^-4	0.75	INTRON Rgk2	TF binding site mE1_TFBS_chinmo
3L	22084660	3L_22084660_SNP [dm3] 3L_22091560_SNP [dm6]	T	C	1.229e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	18881516	2L_18881516_SNP [dm3] 2L_18881516_SNP [dm6]	C	T	1.240e^-4	0.75	UPSTREAM tup INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	11359086	3L_11359086_SNP [dm3] 3L_11365986_SNP [dm6]	A	T	1.241e^-4	0.75	DOWNSTREAM CR45036 INTERGENIC	TF binding site mE1_TFBS_cad
3L	12864503	3L_12864503_SNP [dm3] 3L_12871403_SNP [dm6]	C	T	1.249e^-4	0.75	INTERGENIC
3R	11595357	3R_11595357_SNP [dm3] 3R_15769635_SNP [dm6]	C	G	1.250e^-4	0.75	INTERGENIC
3R	22406814	3R_22406814_SNP [dm3] 3R_26581092_SNP [dm6]	C	T	1.258e^-4	0.75	UTR_3_PRIME scrib INTRON scrib	TF binding site mE1_TFBS_cad
3L	22226281	3L_22226281_SNP [dm3] 3L_22233181_SNP [dm6]	T	C	1.262e^-4	0.75	INTRON olf413
2L	12176995	2L_12176995_DEL [dm3] 2L_12176995_DEL [dm6]	ATA	A	1.263e^-4	0.75	INTRON aret & 1 other
3L	9793750	3L_9793750_SNP [dm3] 3L_9800650_SNP [dm6]	T	A	1.272e^-4	0.75	DOWNSTREAM Ilp3 & 1 other INTRON CG32052
2L	16529172	2L_16529172_SNP [dm3] 2L_16529172_SNP [dm6]	C	A	1.274e^-4	0.75	UPSTREAM mir-4943 & 1 other INTRON CG5953
3R	1174047	3R_1174047_SNP [dm3] 3R_5348325_SNP [dm6]	T	G	1.279e^-4	0.75	INTRON mtd
2R	5217280	2R_5217280_SNP [dm3] 2R_9329775_SNP [dm6]	T	C	1.281e^-4	0.75	INTRON CG13954 & 1 other
2L	4230866	2L_4230866_SNP [dm3] 2L_4230866_SNP [dm6]	A	T	1.282e^-4	0.75	INTERGENIC
3L	1750754	3L_1750754_SNP [dm3] 3L_1750754_SNP [dm6]	C	T	1.284e^-4	0.75	SYNONYMOUS_CODING CG13921	TF binding site mE1_TFBS_chinmo
X	4637559	X_4637559_SNP [dm3] X_4743526_SNP [dm6]	G	A	1.292e^-4	0.75	INTERGENIC
3R	26762212	3R_26762212_SNP [dm3] 3R_30936490_SNP [dm6]	G	T	1.296e^-4	0.75	UTR_5_PRIME CG15549 DOWNSTREAM CG15550	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11051174	3L_11051174_SNP [dm3] 3L_11058074_SNP [dm6]	T	C	1.309e^-4	0.75	SYNONYMOUS_CODING CG7888	TF binding site mE1_TFBS_cad
3R	26079196	3R_26079196_SNP [dm3] 3R_30253474_SNP [dm6]	T	C	1.313e^-4	0.75	DOWNSTREAM CG9682 INTRON CG18404
2L	16359959	2L_16359959_SNP [dm3] 2L_16359959_SNP [dm6]	A	G	1.313e^-4	0.75	INTERGENIC
2L	12721632	2L_12721632_SNP [dm3] 2L_12721632_SNP [dm6]	A	C	1.314e^-4	0.75	UPSTREAM MRP INTRON MRP & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_Ubx
X	7423338	X_7423338_SNP [dm3] X_7529305_SNP [dm6]	C	A	1.317e^-4	0.75	DOWNSTREAM CG43138 INTRON CG32719
X	8439675	X_8439675_SNP [dm3] X_8545642_SNP [dm6]	T	C	1.325e^-4	0.75	SYNONYMOUS_CODING Nrg	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	14428243	2R_14428243_SNP [dm3] 2R_18540738_SNP [dm6]	G	A	1.327e^-4	0.75	INTRON Rgk2	TF binding site mE1_TFBS_chinmo
2L	1270087	2L_1270087_SNP [dm3] 2L_1270087_SNP [dm6]	C	G	1.328e^-4	0.75	INTRON robo3
2L	18304972	2L_18304972_DEL [dm3] 2L_18304972_DEL [dm6]	GG	G	1.333e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
3L	14901646	3L_14901646_SNP [dm3] 3L_14908546_SNP [dm6]	A	T	1.336e^-4	0.75	INTRON DCX-EMAP
2L	6803912	2L_6803912_SNP [dm3] 2L_6803912_SNP [dm6]	A	C	1.338e^-4	0.75	DOWNSTREAM CG17375 INTRON CG11236	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2R	15702044	2R_15702044_SNP [dm3] 2R_19814539_SNP [dm6]	C	T	1.352e^-4	0.75	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	21982919	X_21982919_SNP [dm3] X_22581083_SNP [dm6]	C	T	1.361e^-4	0.75	INTERGENIC
2R	15966218	2R_15966218_SNP [dm3] 2R_20078713_SNP [dm6]	A	T	1.362e^-4	0.75	INTERGENIC
X	7316432	X_7316432_SNP [dm3] X_7422399_SNP [dm6]	C	T	1.363e^-4	0.75	DOWNSTREAM CG9657 INTERGENIC
3R	25273070	3R_25273070_SNP [dm3] 3R_29447348_SNP [dm6]	G	C	1.370e^-4	0.75	INTRON Ptp99A
2L	14567182	2L_14567182_SNP [dm3] 2L_14567182_SNP [dm6]	C	T	1.372e^-4	0.75	INTERGENIC
3R	21976588	3R_21976588_SNP [dm3] 3R_26150866_SNP [dm6]	G	C	1.373e^-4	0.75	INTERGENIC
X	10438548	X_10438548_SNP [dm3] X_10544515_SNP [dm6]	A	T	1.374e^-4	0.75	UTR_5_PRIME spri INTRON spri
3L	16819814	3L_16819814_SNP [dm3] 3L_16826714_SNP [dm6]	G	T	1.378e^-4	0.75	INTRON CG13024
3L	11359068	3L_11359068_SNP [dm3] 3L_11365968_SNP [dm6]	C	A	1.382e^-4	0.75	DOWNSTREAM CR45036 INTERGENIC	TF binding site mE1_TFBS_cad
3L	11269825	3L_11269825_SNP [dm3] 3L_11276725_SNP [dm6]	A	G	1.385e^-4	0.75	INTERGENIC
3L	2036936	3L_2036936_SNP [dm3] 3L_2036936_SNP [dm6]	G	A	1.387e^-4	0.75	DOWNSTREAM CG42355 INTERGENIC
3L	11269819	3L_11269819_SNP [dm3] 3L_11276719_SNP [dm6]	C	T	1.388e^-4	0.75	INTERGENIC
3L	1969477	3L_1969477_SNP [dm3] 3L_1969477_SNP [dm6]	T	C	1.392e^-4	0.75	DOWNSTREAM CG11815 INTRON CG1927
2L	12407266	2L_12407266_SNP [dm3] 2L_12407266_SNP [dm6]	G	A	1.398e^-4	0.75	SYNONYMOUS_CODING vir-1
2L	18280815	2L_18280815_SNP [dm3] 2L_18280815_SNP [dm6]	C	T	1.402e^-4	0.75	INTERGENIC
2L	20146162	2L_20146162_SNP [dm3] 2L_20146162_SNP [dm6]	A	C	1.415e^-4	0.75	INTERGENIC
2L	3378237	2L_3378237_SNP [dm3] 2L_3378237_SNP [dm6]	C	T	1.428e^-4	0.75	SYNONYMOUS_CODING Ptpa
2L	4133920	2L_4133920_INS [dm3] 2L_4133920_INS [dm6]	A	AGCC	1.429e^-4	0.75	INTERGENIC
3R	26210117	3R_26210117_SNP [dm3] 3R_30384395_SNP [dm6]	G	T	1.433e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Kr
2L	11062215	2L_11062215_SNP [dm3] 2L_11062215_SNP [dm6]	T	C	1.435e^-4	0.75	INTRON Samuel	TF binding site mE1_TFBS_HSA
X	9039459	X_9039459_SNP [dm3] X_9145426_SNP [dm6]	A	G	1.436e^-4	0.75	INTRON CG7065
3L	2488440	3L_2488440_SNP [dm3] 3L_2488440_SNP [dm6]	G	T	1.438e^-4	0.75	UPSTREAM CG1146 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	22210914	3L_22210914_SNP [dm3] 3L_22217814_SNP [dm6]	C	A	1.440e^-4	0.75	INTRON olf413	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	4168115	3R_4168115_SNP [dm3] 3R_8342393_SNP [dm6]	T	C	1.447e^-4	0.75	SYNONYMOUS_CODING CG9601 DOWNSTREAM Arl2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	3998590	X_3998590_SNP [dm3] X_4104557_SNP [dm6]	T	C	1.463e^-4	0.75	SYNONYMOUS_CODING brn UPSTREAM Xpac	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8963536	3L_8963536_SNP [dm3] 3L_8970436_SNP [dm6]	A	C	1.467e^-4	0.75	INTRON CG5026
3L	22221302	3L_22221302_SNP [dm3] 3L_22228202_SNP [dm6]	C	T	1.467e^-4	0.75	INTRON olf413
2L	16192200	2L_16192200_SNP [dm3] 2L_16192200_SNP [dm6]	C	T	1.468e^-4	0.75	INTERGENIC
2R	12128390	2R_12128390_SNP [dm3] 2R_16240885_SNP [dm6]	C	G	1.472e^-4	0.75	UPSTREAM krimp DOWNSTREAM CG15708 INTERGENIC
2L	2712044	2L_2712044_SNP [dm3] 2L_2712044_SNP [dm6]	G	T	1.473e^-4	0.75	SYNONYMOUS_CODING CG31690	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	17413634	3L_17413634_SNP [dm3] 3L_17420534_SNP [dm6]	C	A	1.474e^-4	0.75	INTRON blot
3L	22221174	3L_22221174_SNP [dm3] 3L_22228074_SNP [dm6]	G	A	1.477e^-4	0.75	INTRON olf413
3L	2036570	3L_2036570_SNP [dm3] 3L_2036570_SNP [dm6]	A	G	1.479e^-4	0.75	DOWNSTREAM CG42355 INTERGENIC
3L	20826376	3L_20826376_SNP [dm3] 3L_20833276_SNP [dm6]	T	C	1.479e^-4	0.75	SPLICE_SITE_REGION Pka-R1 INTRON Pka-R1
3R	10046999	3R_10046999_SNP [dm3] 3R_14221277_SNP [dm6]	A	T	1.491e^-4	0.75	SYNONYMOUS_CODING CG33109 DOWNSTREAM Sp212
3L	18187054	3L_18187054_SNP [dm3] 3L_18193954_SNP [dm6]	C	T	1.500e^-4	0.75	INTERGENIC
3L	913914	3L_913914_SNP [dm3] 3L_913914_SNP [dm6]	G	C	1.510e^-4	0.75	UPSTREAM Glut1 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
X	21974613	X_21974613_SNP [dm3] X_22572777_SNP [dm6]	T	G	1.514e^-4	0.75	INTERGENIC
3L	14901553	3L_14901553_SNP [dm3] 3L_14908453_SNP [dm6]	C	A	1.523e^-4	0.75	INTRON DCX-EMAP	TF binding site BDTNP1_TFBS_twi
2R	9310824	2R_9310824_SNP [dm3] 2R_13423319_SNP [dm6]	G	C	1.526e^-4	0.75	SYNONYMOUS_CODING CG30060 INTRON CG42321
3L	22224954	3L_22224954_SNP [dm3] 3L_22231854_SNP [dm6]	T	G	1.527e^-4	0.75	INTRON olf413
3L	1845605	3L_1845605_SNP [dm3] 3L_1845605_SNP [dm6]	A	C	1.528e^-4	0.75	INTERGENIC
2L	2069853	2L_2069853_SNP [dm3] 2L_2069853_SNP [dm6]	T	C	1.532e^-4	0.75	INTRON dpr3
X	20483473	X_20483473_SNP [dm3] X_20612446_SNP [dm6]	T	G	1.534e^-4	0.75	INTRON RunxA
X	20267979	X_20267979_SNP [dm3] X_20396952_SNP [dm6]	G	T	1.543e^-4	0.75	INTRON HERC2	transposable element FlyBase
2L	13459044	2L_13459044_SNP [dm3] 2L_13459044_SNP [dm6]	T	A	1.544e^-4	0.75	UPSTREAM CR45684 & 1 other DOWNSTREAM CG42809 INTRON CG42784
3L	19447725	3L_19447725_SNP [dm3] 3L_19454625_SNP [dm6]	G	T	1.544e^-4	0.75	UPSTREAM CR45434 INTERGENIC	TF binding site mE1_TFBS_inv
2L	3376872	2L_3376872_INS [dm3] 2L_3376872_INS [dm6]	T	TGGAT	1.546e^-4	0.75	UPSTREAM Ptpa & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
2R	6821793	2R_6821793_SNP [dm3] 2R_10934288_SNP [dm6]	C	T	1.557e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
2L	14260672	2L_14260672_SNP [dm3] 2L_14260672_SNP [dm6]	A	G	1.558e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
3R	11487767	3R_11487767_SNP [dm3] 3R_15662045_SNP [dm6]	C	A	1.564e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr
X	3999298	X_3999298_SNP [dm3] X_4105265_SNP [dm6]	C	T	1.565e^-4	0.75	SYNONYMOUS_CODING brn UPSTREAM cib	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_chinmo mE1_TFBS_HSA
3L	3488073	3L_3488073_DEL [dm3] 3L_3488073_DEL [dm6]	TT	T	1.565e^-4	0.75	INTRON CG42324
3R	23208671	3R_23208671_SNP [dm3] 3R_27382949_SNP [dm6]	C	A	1.565e^-4	0.75	INTRON side
3L	19429786	3L_19429786_SNP [dm3] 3L_19436686_SNP [dm6]	C	T	1.571e^-4	0.75	INTERGENIC
2L	11896174	2L_11896174_SNP [dm3] 2L_11896174_SNP [dm6]	C	G	1.571e^-4	0.75	INTRON Pde1c
X	19343567	X_19343567_SNP [dm3] X_19449534_SNP [dm6]	G	A	1.572e^-4	0.75	INTRON kek5
3L	16822515	3L_16822515_SNP [dm3] 3L_16829415_SNP [dm6]	A	T	1.575e^-4	0.75	UPSTREAM CG13024 INTERGENIC	TF binding site mE1_TFBS_HSA
X	9000557	X_9000557_SNP [dm3] X_9106524_SNP [dm6]	G	A	1.583e^-4	0.75	UTR_5_PRIME Bx42 UPSTREAM Arfrp1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
X	4434808	X_4434808_SNP [dm3] X_4540775_SNP [dm6]	C	T	1.591e^-4	0.75	UPSTREAM CHOp24 & 1 other INTRON CR32773	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA
2L	9197023	2L_9197023_SNP [dm3] 2L_9197023_SNP [dm6]	G	A	1.591e^-4	0.75	INTRON tai
3L	11053305	3L_11053305_SNP [dm3] 3L_11060205_SNP [dm6]	G	C	1.591e^-4	0.75	NON_SYNONYMOUS_CODING CG6321 DOWNSTREAM CG7888
3L	20798049	3L_20798049_SNP [dm3] 3L_20804949_SNP [dm6]	C	T	1.598e^-4	0.75	SYNONYMOUS_CODING Spc105R
3L	1632140	3L_1632140_SNP [dm3] 3L_1632140_SNP [dm6]	C	G	1.598e^-4	0.75	UTR_3_PRIME nSyb DOWNSTREAM nSyb
3L	9214151	3L_9214151_SNP [dm3] 3L_9221051_SNP [dm6]	C	A	1.599e^-4	0.75	UPSTREAM CR45408 INTERGENIC
2L	18253018	2L_18253018_SNP [dm3] 2L_18253018_SNP [dm6]	C	A	1.603e^-4	0.75	DOWNSTREAM CG43406 INTRON CG42750
3R	5408417	3R_5408417_SNP [dm3] 3R_9582695_SNP [dm6]	T	A	1.605e^-4	0.75	INTRON CG8301 & 1 other
2R	8631526	2R_8631526_INS [dm3] 2R_12744021_INS [dm6]	G	GG	1.617e^-4	0.75	INTRON CG42663	TF binding site mE1_TFBS_Trl
2L	11111202	2L_11111202_SNP [dm3] 2L_11111202_SNP [dm6]	G	T	1.619e^-4	0.75	SYNONYMOUS_CODING CG6201 DOWNSTREAM l_2_gd1	TF binding site mE1_TFBS_HSA
3L	22216007	3L_22216007_SNP [dm3] 3L_22222907_SNP [dm6]	T	C	1.625e^-4	0.75	INTRON olf413
3R	4169214	3R_4169214_SNP [dm3] 3R_8343492_SNP [dm6]	C	T	1.625e^-4	0.75	UTR_5_PRIME CG9601 UPSTREAM CG18193 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
X	4333777	X_4333777_SNP [dm3] X_4439744_SNP [dm6]	G	A	1.632e^-4	0.75	INTRON CR32773 & 1 other	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
2R	19415496	2R_19415496_SNP [dm3] 2R_23527973_SNP [dm6]	G	A	1.639e^-4	0.75	UTR_3_PRIME mi & 1 other DOWNSTREAM bw	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	14575400	2L_14575400_SNP [dm3] 2L_14575400_SNP [dm6]	C	T	1.642e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
3L	19446963	3L_19446963_SNP [dm3] 3L_19453863_SNP [dm6]	G	A	1.653e^-4	0.75	UPSTREAM CR45434 INTERGENIC
2L	12713639	2L_12713639_SNP [dm3] 2L_12713639_SNP [dm6]	A	T	1.656e^-4	0.75	UPSTREAM CG5787 DOWNSTREAM CG5792 INTRON CG5792
3L	2031674	3L_2031674_SNP [dm3] 3L_2031674_SNP [dm6]	G	A	1.659e^-4	0.75	INTERGENIC
3L	3517097	3L_3517097_SNP [dm3] 3L_3517097_SNP [dm6]	A	G	1.662e^-4	0.75	INTRON Eip63E	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2R	13234808	2R_13234808_SNP [dm3] 2R_17347303_SNP [dm6]	A	T	1.666e^-4	0.75	INTRON mbl
3L	22133776	3L_22133776_SNP [dm3] 3L_22140676_SNP [dm6]	G	A	1.677e^-4	0.75	INTRON olf413
3R	22761063	3R_22761063_SNP [dm3] 3R_26935341_SNP [dm6]	G	T	1.679e^-4	0.75	INTRON sda
2L	6192389	2L_6192389_SNP [dm3] 2L_6192389_SNP [dm6]	G	T	1.679e^-4	0.75	INTRON CG34380
2L	3765139	2L_3765139_SNP [dm3] 2L_3765139_SNP [dm6]	G	T	1.681e^-4	0.75	UPSTREAM CG43703 INTRON CG43707	TF binding site mE1_TFBS_cad
2R	14209963	2R_14209963_SNP [dm3] 2R_18322458_SNP [dm6]	G	A	1.688e^-4	0.75	INTRON sbb	TF binding site BDTNP1_TFBS_twi mE1_TFBS_Kr
2L	14513875	2L_14513875_SNP [dm3] 2L_14513875_SNP [dm6]	T	C	1.696e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
3L	8551826	3L_8551826_SNP [dm3] 3L_8558726_SNP [dm6]	T	G	1.697e^-4	0.75	INTRON rhea
2L	10592611	2L_10592611_SNP [dm3] 2L_10592611_SNP [dm6]	A	T	1.704e^-4	0.75	INTRON Trim9
3L	22210192	3L_22210192_SNP [dm3] 3L_22217092_SNP [dm6]	A	T	1.705e^-4	0.75	INTRON olf413
3R	14801271	3R_14801271_SNP [dm3] 3R_18975549_SNP [dm6]	T	C	1.709e^-4	0.75	SYNONYMOUS_CODING CG42613 UTR_3_PRIME CG42613 & 1 other
3L	17437024	3L_17437024_SNP [dm3] 3L_17443924_SNP [dm6]	A	G	1.714e^-4	0.75	INTRON CG18265	TF binding site BDTNP1_TFBS_twi
2L	13694901	2L_13694901_SNP [dm3] 2L_13694901_SNP [dm6]	T	C	1.717e^-4	0.75	INTRON CG31814
2L	18292114	2L_18292114_SNP [dm3] 2L_18292114_SNP [dm6]	C	G	1.718e^-4	0.75	UPSTREAM CR44696 & 2 others DOWNSTREAM CR44693 INTERGENIC
3R	16468834	3R_16468834_SNP [dm3] 3R_20643112_SNP [dm6]	C	T	1.728e^-4	0.75	SYNONYMOUS_CODING Lrrk
X	4434811	X_4434811_SNP [dm3] X_4540778_SNP [dm6]	G	T	1.732e^-4	0.75	UPSTREAM CHOp24 & 1 other INTRON CR32773	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA
2R	9640764	2R_9640764_SNP [dm3] 2R_13753259_SNP [dm6]	A	C	1.735e^-4	0.75	UPSTREAM CG6280 INTERGENIC
3R	14059994	3R_14059994_SNP [dm3] 3R_18234272_SNP [dm6]	G	A	1.738e^-4	0.75	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9771720	3R_9771720_SNP [dm3] 3R_13945998_SNP [dm6]	C	G	1.742e^-4	0.75	UPSTREAM Art6 INTERGENIC
3R	23429609	3R_23429609_SNP [dm3] 3R_27603887_SNP [dm6]	A	G	1.747e^-4	0.75	INTRON dsd
2L	3376861	2L_3376861_DEL [dm3] 2L_3376861_DEL [dm6]	TCGATTT	T	1.751e^-4	0.75	UPSTREAM Ptpa & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
2L	12763822	2L_12763822_SNP [dm3] 2L_12763822_SNP [dm6]	A	G	1.751e^-4	0.75	INTERGENIC
2R	7659914	2R_7659914_SNP [dm3] 2R_11772409_SNP [dm6]	C	T	1.753e^-4	0.75	INTRON ths
3R	19825614	3R_19825614_SNP [dm3] 3R_23999892_SNP [dm6]	C	A	1.753e^-4	0.75	SYNONYMOUS_CODING KrT95D	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7089499	3L_7089499_SNP [dm3] 3L_7096399_SNP [dm6]	G	T	1.753e^-4	0.75	INTRON form3
2R	18372857	2R_18372857_SNP [dm3] 2R_22485352_SNP [dm6]	C	A	1.759e^-4	0.75	SYNONYMOUS_CODING CG4554
3R	15194446	3R_15194446_SNP [dm3] 3R_19368724_SNP [dm6]	T	C	1.762e^-4	0.75	DOWNSTREAM Ino80 INTERGENIC
3L	11359058	3L_11359058_SNP [dm3] 3L_11365958_SNP [dm6]	A	G	1.764e^-4	0.75	DOWNSTREAM CR45036 INTERGENIC	TF binding site mE1_TFBS_cad
3R	884932	3R_884932_SNP [dm3] 3R_5059210_SNP [dm6]	G	T	1.765e^-4	0.75	INTERGENIC
3R	3868682	3R_3868682_SNP [dm3] 3R_8042960_SNP [dm6]	C	T	1.769e^-4	0.75	INTRON CG43060	transposable element FlyBase
2L	19778608	2L_19778608_SNP [dm3] 2L_19778608_SNP [dm6]	G	T	1.770e^-4	0.75	SYNONYMOUS_CODING CdGAPr	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	22235669	3L_22235669_DEL [dm3] 3L_22242569_DEL [dm6]	CCTGAGC	C	1.771e^-4	0.75	CODON_DELETION olf413	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	22235747	3L_22235747_SNP [dm3] 3L_22242647_SNP [dm6]	G	A	1.772e^-4	0.75	NON_SYNONYMOUS_CODING olf413	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	7659919	2R_7659919_INS [dm3] 2R_11772414_INS [dm6]	C	CT	1.772e^-4	0.75	INTRON ths
2L	18622007	2L_18622007_SNP [dm3] 2L_18622007_SNP [dm6]	C	T	1.774e^-4	0.75	INTRON MESR3
3L	1893179	3L_1893179_SNP [dm3] 3L_1893179_SNP [dm6]	G	C	1.775e^-4	0.75	DOWNSTREAM CG1887 INTERGENIC
X	4333779	X_4333779_SNP [dm3] X_4439746_SNP [dm6]	A	T	1.777e^-4	0.75	INTRON CR32773 & 1 other	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
3L	8982802	3L_8982802_SNP [dm3] 3L_8989702_SNP [dm6]	C	A	1.781e^-4	0.75	SYNONYMOUS_CODING CG5280 DOWNSTREAM CG5068 & 1 other
2L	13043695	2L_13043695_SNP [dm3] 2L_13043695_SNP [dm6]	A	T	1.782e^-4	0.75	INTRON CG9932
X	21455313	X_21455313_SNP [dm3] X_21584286_SNP [dm6]	C	A	1.792e^-4	0.75	EXON CR44711
3L	14242409	3L_14242409_SNP [dm3] 3L_14249309_SNP [dm6]	T	A	1.795e^-4	0.75	INTERGENIC
3L	18187062	3L_18187062_INS [dm3] 3L_18193962_INS [dm6]	ACCA	TACTGGT	1.796e^-4	0.75	INTERGENIC
2L	2069851	2L_2069851_SNP [dm3] 2L_2069851_SNP [dm6]	A	T	1.814e^-4	0.75	INTRON dpr3
X	20482323	X_20482323_SNP [dm3] X_20611296_SNP [dm6]	T	G	1.818e^-4	0.75	INTRON RunxA
3L	19524300	3L_19524300_SNP [dm3] 3L_19531200_SNP [dm6]	G	A	1.819e^-4	0.75	INTERGENIC
3L	4210306	3L_4210306_SNP [dm3] 3L_4210306_SNP [dm6]	G	C	1.822e^-4	0.75	DOWNSTREAM Cpr64Ab INTRON CG43367	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
2R	11918864	2R_11918864_SNP [dm3] 2R_16031359_SNP [dm6]	G	A	1.828e^-4	0.75	UPSTREAM SP2353 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	16468972	3R_16468972_SNP [dm3] 3R_20643250_SNP [dm6]	T	G	1.828e^-4	0.75	SYNONYMOUS_CODING Lrrk DOWNSTREAM GluRIIE
X	8473493	X_8473493_SNP [dm3] X_8579460_SNP [dm6]	T	A	1.835e^-4	0.75	INTRON CG12065
2R	17182549	2R_17182549_SNP [dm3] 2R_21295044_SNP [dm6]	T	G	1.838e^-4	0.75	SYNONYMOUS_CODING CG9752 UPSTREAM CG42672 DOWNSTREAM RpL29	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
2R	16587338	2R_16587338_SNP [dm3] 2R_20699833_SNP [dm6]	A	G	1.840e^-4	0.75	INTRON dpr
2R	16683659	2R_16683659_SNP [dm3] 2R_20796154_SNP [dm6]	G	A	1.857e^-4	0.75	INTERGENIC
3L	8956678	3L_8956678_SNP [dm3] 3L_8963578_SNP [dm6]	C	G	1.866e^-4	0.75	SYNONYMOUS_CODING CG5660	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	19706781	3R_19706781_SNP [dm3] 3R_23881059_SNP [dm6]	C	T	1.866e^-4	0.75	INTRON Pli	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl
2L	18314783	2L_18314783_SNP [dm3] 2L_18314783_SNP [dm6]	G	T	1.868e^-4	0.75	UPSTREAM CR44489 INTERGENIC
3L	1841752	3L_1841752_SNP [dm3] 3L_1841752_SNP [dm6]	C	G	1.868e^-4	0.75	INTRON Cpr62Bc
X	18419209	X_18419209_SNP [dm3] X_18525176_SNP [dm6]	T	C	1.872e^-4	0.75	INTRON Bx
X	6564317	X_6564317_SNP [dm3] X_6670284_SNP [dm6]	A	G	1.874e^-4	0.75	UTR_3_PRIME CG3198	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	10907855	3R_10907855_SNP [dm3] 3R_15082133_SNP [dm6]	T	C	1.878e^-4	0.75	SYNONYMOUS_CODING CG6966	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	12186669	2R_12186669_SNP [dm3] 2R_16299164_SNP [dm6]	G	T	1.880e^-4	0.75	UPSTREAM CG43265 INTERGENIC	TF binding site mE1_TFBS_chinmo
X	9071598	X_9071598_SNP [dm3] X_9177565_SNP [dm6]	T	A	1.888e^-4	0.75	UTR_3_PRIME mei-P26
2L	7268011	2L_7268011_INS [dm3] 2L_7268011_INS [dm6]	T	TT	1.891e^-4	0.75	INTRON Wnt4	TF binding site mE1_TFBS_cad
X	20482324	X_20482324_SNP [dm3] X_20611297_SNP [dm6]	A	T	1.897e^-4	0.75	INTRON RunxA
2L	12801616	2L_12801616_SNP [dm3] 2L_12801616_SNP [dm6]	T	C	1.900e^-4	0.75	INTERGENIC
3L	9333454	3L_9333454_SNP [dm3] 3L_9340354_SNP [dm6]	A	C	1.904e^-4	0.75	UPSTREAM PGRP-LC INTRON PGRP-LC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	9160237	3L_9160237_SNP [dm3] 3L_9167137_SNP [dm6]	A	T	1.908e^-4	0.75	INTRON Rdl
2L	2110938	2L_2110938_SNP [dm3] 2L_2110938_SNP [dm6]	T	C	1.911e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_bab1
X	18418426	X_18418426_SNP [dm3] X_18524393_SNP [dm6]	T	A	1.911e^-4	0.75	INTRON Bx	TF binding site BDTNP1_TFBS_dl mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
2L	20138004	2L_20138004_SNP [dm3] 2L_20138004_SNP [dm6]	T	C	1.912e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	20482247	X_20482247_SNP [dm3] X_20611220_SNP [dm6]	G	T	1.914e^-4	0.75	INTRON RunxA
X	16401651	X_16401651_SNP [dm3] X_16507618_SNP [dm6]	G	T	1.916e^-4	0.75	INTRON para
3L	13796608	3L_13796608_SNP [dm3] 3L_13803508_SNP [dm6]	T	A	1.918e^-4	0.75	UPSTREAM bru-3 INTERGENIC
3L	20876089	3L_20876089_SNP [dm3] 3L_20882989_SNP [dm6]	C	T	1.923e^-4	0.75	INTRON CG32432
2L	18282683	2L_18282683_SNP [dm3] 2L_18282683_SNP [dm6]	T	C	1.925e^-4	0.75	INTERGENIC
3L	5340755	3L_5340755_SNP [dm3] 3L_5347655_SNP [dm6]	C	T	1.934e^-4	0.75	UTR_5_PRIME lama
3R	11487768	3R_11487768_SNP [dm3] 3R_15662046_SNP [dm6]	T	G	1.943e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr
2L	1423282	2L_1423282_SNP [dm3] 2L_1423282_SNP [dm6]	T	A	1.945e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	11335410	2L_11335410_SNP [dm3] 2L_11335410_SNP [dm6]	A	G	1.961e^-4	0.75	INTERGENIC
3L	17585300	3L_17585300_SNP [dm3] 3L_17592200_SNP [dm6]	G	A	1.969e^-4	0.75	INTRON Eip74EF
3L	11061339	3L_11061339_SNP [dm3] 3L_11068239_SNP [dm6]	T	G	1.971e^-4	0.75	SYNONYMOUS_CODING SuUR UTR_3_PRIME CG45101 DOWNSTREAM CG6310
2L	13700034	2L_13700034_SNP [dm3] 2L_13700034_SNP [dm6]	G	C	1.979e^-4	0.75	INTRON CG31814
X	18992689	X_18992689_SNP [dm3] X_19098656_SNP [dm6]	C	T	1.983e^-4	0.75	INTERGENIC
2L	16361449	2L_16361449_SNP [dm3] 2L_16361449_SNP [dm6]	G	T	1.989e^-4	0.75	INTERGENIC
X	10407210	X_10407210_SNP [dm3] X_10513177_SNP [dm6]	T	G	1.991e^-4	0.75	INTRON spri
2L	12722116	2L_12722116_SNP [dm3] 2L_12722116_SNP [dm6]	A	T	1.991e^-4	0.75	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
3R	21105435	3R_21105435_SNP [dm3] 3R_25279713_SNP [dm6]	C	T	1.998e^-4	0.75	SYNONYMOUS_CODING CG10514	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	12770555	2L_12770555_SNP [dm3] 2L_12770555_SNP [dm6]	T	G	2.008e^-4	0.75	INTERGENIC
3L	8852916	3L_8852916_SNP [dm3] 3L_8859816_SNP [dm6]	T	A	2.020e^-4	0.75	INTRON dally	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_inv
3L	2037186	3L_2037186_SNP [dm3] 3L_2037186_SNP [dm6]	G	T	2.026e^-4	0.75	DOWNSTREAM CG42355 INTERGENIC
2L	11772198	2L_11772198_SNP [dm3] 2L_11772198_SNP [dm6]	G	T	2.028e^-4	0.75	INTERGENIC
2L	9514331	2L_9514331_SNP [dm3] 2L_9514331_SNP [dm6]	C	T	2.035e^-4	0.75	INTRON CG33298
X	5811335	X_5811335_SNP [dm3] X_5917302_SNP [dm6]	C	A	2.036e^-4	0.75	START_GAINED CG3726 UTR_5_PRIME CG3726 UPSTREAM CG3011	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	26079209	3R_26079209_SNP [dm3] 3R_30253487_SNP [dm6]	C	T	2.054e^-4	0.75	SPLICE_SITE_REGION CG18404 SYNONYMOUS_CODING CG18404 DOWNSTREAM CG9682
2L	9312415	2L_9312415_SNP [dm3] 2L_9312415_SNP [dm6]	T	C	2.057e^-4	0.75	INTERGENIC
3L	10911372	3L_10911372_SNP [dm3] 3L_10918272_SNP [dm6]	C	T	2.057e^-4	0.75	INTERGENIC
X	18209212	X_18209212_SNP [dm3] X_18315179_SNP [dm6]	G	A	2.062e^-4	0.75	SYNONYMOUS_CODING CG6023 UTR_5_PRIME CG6023	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
2L	12722184	2L_12722184_SNP [dm3] 2L_12722184_SNP [dm6]	A	G	2.068e^-4	0.75	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
3L	22227610	3L_22227610_SNP [dm3] 3L_22234510_SNP [dm6]	C	T	2.068e^-4	0.75	INTRON olf413
3R	10946646	3R_10946646_INS [dm3] 3R_15120924_INS [dm6]	T	TGGT	2.074e^-4	0.75	INTRON CG42788
X	20482271	X_20482271_SNP [dm3] X_20611244_SNP [dm6]	A	G	2.088e^-4	0.75	INTRON RunxA
X	20482334	X_20482334_DEL [dm3] X_20611307_DEL [dm6]	CAAT	C	2.088e^-4	0.75	INTRON RunxA
X	20482339	X_20482339_DEL [dm3] X_20611312_DEL [dm6]	CATTAGACAAAT...	C	2.088e^-4	0.75	INTRON RunxA
X	20482352	X_20482352_SNP [dm3] X_20611325_SNP [dm6]	T	C	2.088e^-4	0.75	INTRON RunxA
X	20482353	X_20482353_SNP [dm3] X_20611326_SNP [dm6]	T	G	2.088e^-4	0.75	INTRON RunxA
X	20482356	X_20482356_SNP [dm3] X_20611329_SNP [dm6]	C	T	2.088e^-4	0.75	INTRON RunxA
X	20482362	X_20482362_SNP [dm3] X_20611335_SNP [dm6]	G	A	2.088e^-4	0.75	INTRON RunxA
X	6825863	X_6825863_SNP [dm3] X_6931830_SNP [dm6]	T	C	2.103e^-4	0.75	INTRON CG14431
X	3853976	X_3853976_SNP [dm3] X_3959943_SNP [dm6]	C	T	2.106e^-4	0.75	SYNONYMOUS_CODING lva	TF binding site mE1_TFBS_chinmo
3L	3504554	3L_3504554_SNP [dm3] 3L_3504554_SNP [dm6]	C	G	2.107e^-4	0.75	INTRON CG42324
3L	4349813	3L_4349813_SNP [dm3] 3L_4349813_SNP [dm6]	C	T	2.108e^-4	0.75	INTRON Cip4
2L	661593	2L_661593_SNP [dm3] 2L_661593_SNP [dm6]	G	T	2.111e^-4	0.75	INTRON ds	TF binding site mE1_TFBS_HSA
3L	2488424	3L_2488424_SNP [dm3] 3L_2488424_SNP [dm6]	A	T	2.111e^-4	0.75	UPSTREAM CG1146 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	15173081	2L_15173081_SNP [dm3] 2L_15173081_SNP [dm6]	G	C	2.115e^-4	0.75	INTRON CG4168
2R	8429759	2R_8429759_SNP [dm3] 2R_12542254_SNP [dm6]	G	A	2.115e^-4	0.75	INTRON fra
3R	24699122	3R_24699122_SNP [dm3] 3R_28873400_SNP [dm6]	A	G	2.119e^-4	0.75	SYNONYMOUS_CODING CG14529 INTRON CG33203	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	25615769	3R_25615769_SNP [dm3] 3R_29790047_SNP [dm6]	G	T	2.121e^-4	0.75	UTR_5_PRIME kay INTRON kay	TF binding site mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
3L	22141472	3L_22141472_SNP [dm3] 3L_22148372_SNP [dm6]	C	A	2.121e^-4	0.75	INTRON olf413	TF binding site BDTNP1_TFBS_da mE1_TFBS_cnc mE1_TFBS_HSA
2L	18316805	2L_18316805_SNP [dm3] 2L_18316805_SNP [dm6]	T	C	2.145e^-4	0.75	INTERGENIC
2L	19651088	2L_19651088_DEL [dm3] 2L_19651088_DEL [dm6]	TTTTA	T	2.146e^-4	0.75	INTRON Lar
2L	11599096	2L_11599096_SNP [dm3] 2L_11599096_SNP [dm6]	T	A	2.162e^-4	0.75	INTRON kek2
X	5405601	X_5405601_SNP [dm3] X_5511568_SNP [dm6]	T	C	2.165e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_hkb mE1_TFBS_HSA
3R	10856287	3R_10856287_SNP [dm3] 3R_15030565_SNP [dm6]	C	T	2.172e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_inv
3L	20971200	3L_20971200_SNP [dm3] 3L_20978100_SNP [dm6]	T	G	2.176e^-4	0.75	UPSTREAM CR33283 INTERGENIC
X	15676242	X_15676242_DEL [dm3] X_15782209_DEL [dm6]	AA	A	2.181e^-4	0.75	INTRON Efhc1.1
2R	12230649	2R_12230649_SNP [dm3] 2R_16343144_SNP [dm6]	G	A	2.182e^-4	0.75	SYNONYMOUS_CODING CG7997
3L	9329780	3L_9329780_INS [dm3] 3L_9336680_INS [dm6]	A	ACA	2.197e^-4	0.75	INTRON PGRP-LA
2L	10375896	2L_10375896_SNP [dm3] 2L_10375896_SNP [dm6]	T	A	2.198e^-4	0.75	UPSTREAM dpr19 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	18495285	2L_18495285_SNP [dm3] 2L_18495285_SNP [dm6]	T	A	2.205e^-4	0.75	INTRON kon
X	7692048	X_7692048_SNP [dm3] X_7798015_SNP [dm6]	C	T	2.208e^-4	0.75	INTERGENIC
2R	9931926	2R_9931926_SNP [dm3] 2R_14044421_SNP [dm6]	A	G	2.210e^-4	0.75	INTRON mam	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	8631536	2R_8631536_DEL [dm3] 2R_12744031_DEL [dm6]	TGCGTAAGTTTAGTTTCGT...	T	2.213e^-4	0.75	INTRON CG42663	TF binding site mE1_TFBS_Trl
X	20482269	X_20482269_SNP [dm3] X_20611242_SNP [dm6]	T	C	2.214e^-4	0.75	INTRON RunxA
2L	2069847	2L_2069847_SNP [dm3] 2L_2069847_SNP [dm6]	T	G	2.216e^-4	0.75	INTRON dpr3
X	8473488	X_8473488_SNP [dm3] X_8579455_SNP [dm6]	T	A	2.217e^-4	0.75	INTRON CG12065
3L	22212649	3L_22212649_SNP [dm3] 3L_22219549_SNP [dm6]	G	C	2.220e^-4	0.75	INTRON olf413	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_twi
3L	10467366	3L_10467366_SNP [dm3] 3L_10474266_SNP [dm6]	T	A	2.230e^-4	0.75	INTERGENIC
3L	8587917	3L_8587917_SNP [dm3] 3L_8594817_SNP [dm6]	C	G	2.235e^-4	0.75	SYNONYMOUS_CODING CG43078 UTR_3_PRIME CG43078	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	18033134	3L_18033134_SNP [dm3] 3L_18040034_SNP [dm6]	A	G	2.237e^-4	0.75	UPSTREAM CG32192 INTRON Eip75B
2L	15097157	2L_15097157_SNP [dm3] 2L_15097157_SNP [dm6]	C	T	2.242e^-4	0.75	DOWNSTREAM CG15270 INTERGENIC
2R	16085579	2R_16085579_SNP [dm3] 2R_20198074_SNP [dm6]	T	A	2.249e^-4	0.75	INTERGENIC
3L	22230502	3L_22230502_SNP [dm3] 3L_22237402_SNP [dm6]	C	T	2.253e^-4	0.75	INTRON olf413
2L	2110931	2L_2110931_SNP [dm3] 2L_2110931_SNP [dm6]	T	A	2.253e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_bab1
3L	7886729	3L_7886729_SNP [dm3] 3L_7893629_SNP [dm6]	C	T	2.261e^-4	0.75	INTRON CG32365	TF binding site mE1_TFBS_cad
X	2160246	X_2160246_SNP [dm3] X_2266213_SNP [dm6]	A	G	2.263e^-4	0.75	INTRON CG2924
2L	14626376	2L_14626376_SNP [dm3] 2L_14626376_SNP [dm6]	G	A	2.264e^-4	0.75	INTRON osp
2L	18316303	2L_18316303_SNP [dm3] 2L_18316303_SNP [dm6]	A	G	2.267e^-4	0.75	INTERGENIC
2L	14567116	2L_14567116_SNP [dm3] 2L_14567116_SNP [dm6]	G	C	2.273e^-4	0.75	INTERGENIC
3R	2566448	3R_2566448_SNP [dm3] 3R_6740726_SNP [dm6]	A	T	2.281e^-4	0.75	INTRON pb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3L	18368366	3L_18368366_SNP [dm3] 3L_18375266_SNP [dm6]	G	T	2.285e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	7664432	3R_7664432_SNP [dm3] 3R_11838710_SNP [dm6]	C	T	2.285e^-4	0.75	INTRON CG6959
2L	3856380	2L_3856380_SNP [dm3] 2L_3856380_SNP [dm6]	A	G	2.287e^-4	0.75	DOWNSTREAM CR45450 INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	10053366	2L_10053366_SNP [dm3] 2L_10053366_SNP [dm6]	A	G	2.291e^-4	0.75	UPSTREAM CR44875 & 1 other INTERGENIC
2L	16359933	2L_16359933_SNP [dm3] 2L_16359933_SNP [dm6]	T	A	2.295e^-4	0.75	INTERGENIC
3L	20875981	3L_20875981_SNP [dm3] 3L_20882881_SNP [dm6]	C	T	2.298e^-4	0.75	INTRON CG32432
3L	4092421	3L_4092421_SNP [dm3] 3L_4092421_SNP [dm6]	T	C	2.301e^-4	0.75	UTR_3_PRIME CG14989 UPSTREAM CG14990	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	819178	3L_819178_SNP [dm3] 3L_819178_SNP [dm6]	T	C	2.306e^-4	0.75	INTERGENIC
3L	11359152	3L_11359152_SNP [dm3] 3L_11366052_SNP [dm6]	C	A	2.307e^-4	0.75	DOWNSTREAM CR45036 INTERGENIC	TF binding site mE1_TFBS_cad
3L	17935584	3L_17935584_SNP [dm3] 3L_17942484_SNP [dm6]	C	G	2.310e^-4	0.75	INTRON CG43174
2L	3701937	2L_3701937_SNP [dm3] 2L_3701937_SNP [dm6]	T	C	2.320e^-4	0.75	UPSTREAM CR44311 DOWNSTREAM Sfp24C1 & 1 other INTRON CG43145
X	4296533	X_4296533_SNP [dm3] X_4402500_SNP [dm6]	A	T	2.322e^-4	0.75	INTRON CR32773	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
2L	15521848	2L_15521848_SNP [dm3] 2L_15521848_SNP [dm6]	A	G	2.323e^-4	0.75	UPSTREAM CR43761 INTERGENIC	TF binding site mE1_TFBS_inv
3L	22084719	3L_22084719_SNP [dm3] 3L_22091619_SNP [dm6]	T	G	2.325e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	12707618	2L_12707618_SNP [dm3] 2L_12707618_SNP [dm6]	A	T	2.330e^-4	0.75	UTR_5_PRIME CG15484 UPSTREAM CG6180 DOWNSTREAM spict	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Ubx
3R	25592553	3R_25592553_SNP [dm3] 3R_29766831_SNP [dm6]	A	C	2.350e^-4	0.75	UTR_5_PRIME kay	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo
3L	14901512	3L_14901512_SNP [dm3] 3L_14908412_SNP [dm6]	T	C	2.353e^-4	0.75	INTRON DCX-EMAP	TF binding site BDTNP1_TFBS_twi
X	8473587	X_8473587_SNP [dm3] X_8579554_SNP [dm6]	A	G	2.355e^-4	0.75	INTRON CG12065
2L	4646387	2L_4646387_SNP [dm3] 2L_4646387_SNP [dm6]	A	G	2.356e^-4	0.75	NON_SYNONYMOUS_CODING CG15635 UPSTREAM CG43798
2L	2759785	2L_2759785_SNP [dm3] 2L_2759785_SNP [dm6]	T	G	2.356e^-4	0.75	UPSTREAM Trn-SR & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2L	10167949	2L_10167949_SNP [dm3] 2L_10167949_SNP [dm6]	C	T	2.356e^-4	0.75	INTRON CG44153
2L	12721963	2L_12721963_SNP [dm3] 2L_12721963_SNP [dm6]	A	T	2.367e^-4	0.75	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
3L	2488423	3L_2488423_SNP [dm3] 3L_2488423_SNP [dm6]	A	C	2.367e^-4	0.75	UPSTREAM CG1146 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26756827	3R_26756827_SNP [dm3] 3R_30931105_SNP [dm6]	C	T	2.388e^-4	0.75	DOWNSTREAM Ptx1 INTERGENIC
2L	18495273	2L_18495273_SNP [dm3] 2L_18495273_SNP [dm6]	G	A	2.388e^-4	0.75	INTRON kon
2R	16824113	2R_16824113_SNP [dm3] 2R_20936608_SNP [dm6]	G	A	2.392e^-4	0.75	NON_SYNONYMOUS_CODING Rx
3R	15195261	3R_15195261_DEL [dm3] 3R_19369539_DEL [dm6]	TATGTATTTATGTAATTTTC...	T	2.394e^-4	0.75	INTRON Ino80
2L	924055	2L_924055_SNP [dm3] 2L_924055_SNP [dm6]	G	T	2.395e^-4	0.75	INTRON CG4341	TF binding site mE1_TFBS_chinmo
3R	18773939	3R_18773939_SNP [dm3] 3R_22948217_SNP [dm6]	G	T	2.399e^-4	0.75	INTRON klg	TF binding site BDTNP1_TFBS_prd mE1_TFBS_chinmo mE1_TFBS_HSA
3L	1841581	3L_1841581_SNP [dm3] 3L_1841581_SNP [dm6]	T	G	2.412e^-4	0.75	INTRON Cpr62Bc
3R	26079197	3R_26079197_SNP [dm3] 3R_30253475_SNP [dm6]	A	T	2.412e^-4	0.75	DOWNSTREAM CG9682 INTRON CG18404
X	19879370	X_19879370_SNP [dm3] X_19985337_SNP [dm6]	T	A	2.414e^-4	0.75	INTERGENIC
2L	13823228	2L_13823228_SNP [dm3] 2L_13823228_SNP [dm6]	A	G	2.416e^-4	0.75	SYNONYMOUS_CODING b DOWNSTREAM tam	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	22205916	3L_22205916_SNP [dm3] 3L_22212816_SNP [dm6]	C	A	2.416e^-4	0.75	INTRON olf413
3R	13293705	3R_13293705_SNP [dm3] 3R_17467983_SNP [dm6]	C	T	2.422e^-4	0.75	INTERGENIC
3R	4167207	3R_4167207_SNP [dm3] 3R_8341485_SNP [dm6]	C	G	2.425e^-4	0.75	NON_SYNONYMOUS_CODING Arl2 UPSTREAM CG9603 DOWNSTREAM CG9601	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
3L	10856100	3L_10856100_SNP [dm3] 3L_10863000_SNP [dm6]	C	T	2.427e^-4	0.75	INTRON tna	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3R	13791626	3R_13791626_SNP [dm3] 3R_17965904_SNP [dm6]	C	T	2.439e^-4	0.75	INTRON cpo
2R	5235581	2R_5235581_SNP [dm3] 2R_9348076_SNP [dm6]	T	C	2.440e^-4	0.75	UTR_3_PRIME Or45a INTRON CG13954 & 1 other
3L	20876088	3L_20876088_SNP [dm3] 3L_20882988_SNP [dm6]	G	A	2.448e^-4	0.75	INTRON CG32432
2L	4692348	2L_4692348_SNP [dm3] 2L_4692348_SNP [dm6]	T	C	2.453e^-4	0.75	INTERGENIC
3L	7167626	3L_7167626_SNP [dm3] 3L_7174526_SNP [dm6]	T	G	2.453e^-4	0.75	UTR_3_PRIME Dscam2 INTRON Dscam2
X	9452129	X_9452129_SNP [dm3] X_9558096_SNP [dm6]	T	A	2.463e^-4	0.75	DOWNSTREAM Cubn EXON CR42767
3L	11055372	3L_11055372_SNP [dm3] 3L_11062272_SNP [dm6]	A	T	2.469e^-4	0.75	DOWNSTREAM CG32075 & 1 other INTRON CG32069	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_ttk mE1_TFBS_Ubx
2L	11140775	2L_11140775_SNP [dm3] 2L_11140775_SNP [dm6]	G	C	2.470e^-4	0.75	INTRON Gyc32E
X	7425374	X_7425374_SNP [dm3] X_7531341_SNP [dm6]	T	G	2.472e^-4	0.75	INTRON CG32719
3L	14502287	3L_14502287_SNP [dm3] 3L_14509187_SNP [dm6]	G	A	2.479e^-4	0.75	SYNONYMOUS_CODING bbg
2L	11772882	2L_11772882_SNP [dm3] 2L_11772882_SNP [dm6]	G	A	2.491e^-4	0.75	INTERGENIC
X	20982220	X_20982220_DEL [dm3] X_21111193_DEL [dm6]	GTAAG	G	2.493e^-4	0.75	UTR_3_PRIME stg1 & 1 other DOWNSTREAM unc	TF binding site mE1_TFBS_chinmo
X	21990712	X_21990712_SNP [dm3] X_22588876_SNP [dm6]	G	C	2.495e^-4	0.75	INTRON Cda4	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna
X	13909602	X_13909602_SNP [dm3] X_14015569_SNP [dm6]	A	T	2.506e^-4	0.75	UPSTREAM tRNA:R:12Ea DOWNSTREAM tRNA:R:12Ee & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
3R	5994863	3R_5994863_SNP [dm3] 3R_10169141_SNP [dm6]	T	C	2.506e^-4	0.75	INTRON Best1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Kr mE1_TFBS_zfh1
3L	8676634	3L_8676634_SNP [dm3] 3L_8683534_SNP [dm6]	A	C	2.513e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	7425371	X_7425371_INS [dm3] X_7531338_INS [dm6]	A	AATCCCT	2.517e^-4	0.75	INTRON CG32719
3R	843811	3R_843811_SNP [dm3] 3R_5018089_SNP [dm6]	T	A	2.519e^-4	0.75	INTRON CR45585	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16212614	X_16212614_SNP [dm3] X_16318581_SNP [dm6]	G	A	2.520e^-4	0.75	SYNONYMOUS_CODING Cyp1 DOWNSTREAM CG13957	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2L	12722004	2L_12722004_SNP [dm3] 2L_12722004_SNP [dm6]	A	C	2.521e^-4	0.75	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
2R	19669493	2R_19669493_SNP [dm3] 2R_23781970_SNP [dm6]	T	G	2.532e^-4	0.75	INTRON CG9850
3R	4166861	3R_4166861_SNP [dm3] 3R_8341139_SNP [dm6]	G	A	2.537e^-4	0.75	UTR_5_PRIME Arl2 UPSTREAM CG9603 DOWNSTREAM CG9601	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3R	15101259	3R_15101259_SNP [dm3] 3R_19275537_SNP [dm6]	G	T	2.537e^-4	0.75	INTERGENIC
3L	10561210	3L_10561210_DEL [dm3] 3L_10568110_DEL [dm6]	TT	T	2.538e^-4	0.75	INTRON A2bp1
2L	16918901	2L_16918901_INS [dm3] 2L_16918901_INS [dm6]	A	AACA	2.539e^-4	0.75	INTERGENIC
3R	16470713	3R_16470713_SNP [dm3] 3R_20644991_SNP [dm6]	C	G	2.539e^-4	0.75	SPLICE_SITE_REGION GluRIIE DOWNSTREAM Lrrk INTRON GluRIIE
3L	7033183	3L_7033183_SNP [dm3] 3L_7040083_SNP [dm6]	G	T	2.551e^-4	0.75	INTRON Mp
3L	5099659	3L_5099659_SNP [dm3] 3L_5099659_SNP [dm6]	G	T	2.554e^-4	0.75	EXON CR34047
2R	16684710	2R_16684710_INS [dm3] 2R_20797205_INS [dm6]	T	TT	2.556e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	10294562	2R_10294562_SNP [dm3] 2R_14407057_SNP [dm6]	C	T	2.560e^-4	0.75	INTERGENIC
3L	17757185	3L_17757185_SNP [dm3] 3L_17764085_SNP [dm6]	G	A	2.563e^-4	0.75	UTR_5_PRIME Adgf-A & 1 other	TF binding site mE1_TFBS_Trl
3L	11055392	3L_11055392_SNP [dm3] 3L_11062292_SNP [dm6]	T	C	2.573e^-4	0.75	SPLICE_SITE_REGION CG32069 SYNONYMOUS_CODING CG32069 DOWNSTREAM CG32075 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk mE1_TFBS_Ubx
2R	6926324	2R_6926324_SNP [dm3] 2R_11038819_SNP [dm6]	T	C	2.578e^-4	0.75	INTRON luna
X	5681885	X_5681885_SNP [dm3] X_5787852_SNP [dm6]	T	C	2.580e^-4	0.75	INTRON CG42699
X	7470776	X_7470776_SNP [dm3] X_7576743_SNP [dm6]	C	T	2.600e^-4	0.75	UTR_3_PRIME CG11369	regulatory region REDfly_CRMs
3L	8945240	3L_8945240_SNP [dm3] 3L_8952140_SNP [dm6]	G	T	2.602e^-4	0.75	INTRON orb2 & 1 other	TF binding site BDTNP1_TFBS_dl
2L	6736971	2L_6736971_SNP [dm3] 2L_6736971_SNP [dm6]	T	C	2.606e^-4	0.75	SYNONYMOUS_CODING TTLL3A DOWNSTREAM TTLL3B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo
X	21986967	X_21986967_DEL [dm3] X_22585131_DEL [dm6]	CC	C	2.610e^-4	0.75	INTRON Cda4
3L	22216360	3L_22216360_SNP [dm3] 3L_22223260_SNP [dm6]	A	T	2.618e^-4	0.75	INTRON olf413
2R	6759202	2R_6759202_DEL [dm3] 2R_10871697_DEL [dm6]	ATTTTGAGATTCAACATTTT...	A	2.623e^-4	0.75	INTRON CG30015	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	2031690	3L_2031690_SNP [dm3] 3L_2031690_SNP [dm6]	A	C	2.623e^-4	0.75	INTERGENIC
2L	3701932	2L_3701932_SNP [dm3] 2L_3701932_SNP [dm6]	T	A	2.629e^-4	0.75	UPSTREAM CR44311 DOWNSTREAM Sfp24C1 & 1 other INTRON CG43145
2R	15064792	2R_15064792_INS [dm3] 2R_19177287_INS [dm6]	A	AAA	2.630e^-4	0.75	DOWNSTREAM CG10737 INTRON CG10737
3L	11062774	3L_11062774_SNP [dm3] 3L_11069674_SNP [dm6]	A	G	2.634e^-4	0.75	SYNONYMOUS_CODING CG6310 UPSTREAM Mocs1 DOWNSTREAM SuUR & 1 other
3L	7033144	3L_7033144_SNP [dm3] 3L_7040044_SNP [dm6]	A	T	2.641e^-4	0.75	INTRON Mp
3L	16822454	3L_16822454_SNP [dm3] 3L_16829354_SNP [dm6]	G	A	2.641e^-4	0.75	UPSTREAM CG13024 INTERGENIC	TF binding site mE1_TFBS_HSA
3L	17760902	3L_17760902_SNP [dm3] 3L_17767802_SNP [dm6]	T	A	2.646e^-4	0.75	INTERGENIC
3L	3517169	3L_3517169_SNP [dm3] 3L_3517169_SNP [dm6]	A	C	2.647e^-4	0.75	INTRON Eip63E	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2R	12128386	2R_12128386_DEL [dm3] 2R_16240881_DEL [dm6]	TT	G	2.652e^-4	0.75	UPSTREAM krimp DOWNSTREAM CG15708 INTERGENIC
3L	2036571	3L_2036571_SNP [dm3] 3L_2036571_SNP [dm6]	T	C	2.654e^-4	0.75	DOWNSTREAM CG42355 INTERGENIC
3L	18033336	3L_18033336_SNP [dm3] 3L_18040236_SNP [dm6]	T	C	2.655e^-4	0.75	UPSTREAM CG32192 INTRON Eip75B
2L	16358583	2L_16358583_SNP [dm3] 2L_16358583_SNP [dm6]	A	C	2.659e^-4	0.75	INTERGENIC
3R	2844796	3R_2844796_SNP [dm3] 3R_7019074_SNP [dm6]	G	T	2.665e^-4	0.75	INTERGENIC
X	13163216	X_13163216_SNP [dm3] X_13269183_SNP [dm6]	A	C	2.668e^-4	0.75	INTRON HDAC4
2R	16824077	2R_16824077_SNP [dm3] 2R_20936572_SNP [dm6]	T	C	2.677e^-4	0.75	NON_SYNONYMOUS_CODING Rx
2R	18584207	2R_18584207_SNP [dm3] 2R_22696702_SNP [dm6]	A	G	2.690e^-4	0.75	INTRON robo	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	18584223	2R_18584223_SNP [dm3] 2R_22696718_SNP [dm6]	C	T	2.690e^-4	0.75	INTRON robo	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	14242432	3L_14242432_SNP [dm3] 3L_14249332_SNP [dm6]	T	A	2.694e^-4	0.75	INTERGENIC
X	3853721	X_3853721_SNP [dm3] X_3959688_SNP [dm6]	T	A	2.696e^-4	0.75	SYNONYMOUS_CODING lva	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	21510352	3R_21510352_SNP [dm3] 3R_25684630_SNP [dm6]	T	C	2.698e^-4	0.75	DOWNSTREAM CG5028 & 1 other INTRON RpL27	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3R	3214235	3R_3214235_DEL [dm3] 3R_7388513_DEL [dm6]	GGATTCAGGCTG...	G	2.702e^-4	0.75	DOWNSTREAM CR45560 INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	15064669	2R_15064669_SNP [dm3] 2R_19177164_SNP [dm6]	C	T	2.713e^-4	0.75	DOWNSTREAM CG10737 INTRON CG10737
3L	1843427	3L_1843427_SNP [dm3] 3L_1843427_SNP [dm6]	A	C	2.723e^-4	0.75	INTERGENIC
3L	22170658	3L_22170658_SNP [dm3] 3L_22177558_SNP [dm6]	G	A	2.724e^-4	0.75	INTRON olf413	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med
X	3995614	X_3995614_SNP [dm3] X_4101581_SNP [dm6]	C	T	2.727e^-4	0.75	SYNONYMOUS_CODING CG15375 UPSTREAM CG6379	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	8424233	X_8424233_SNP [dm3] X_8530200_SNP [dm6]	G	C	2.728e^-4	0.75	UPSTREAM PIP82 INTRON Nrg	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	2218892	X_2218892_SNP [dm3] X_2324859_SNP [dm6]	G	A	2.728e^-4	0.75	SYNONYMOUS_CODING CG14050 INTRON phl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	5020007	X_5020007_MNP [dm3] X_5125974_MNP [dm6]	AAC	GTG	2.736e^-4	0.75	INTRON rg & 1 other
2L	6225057	2L_6225057_SNP [dm3] 2L_6225057_SNP [dm6]	T	G	2.737e^-4	0.75	UTR_5_PRIME Ugt37b1	TF binding site BDTNP1_TFBS_twi
3L	9906433	3L_9906433_SNP [dm3] 3L_9913333_SNP [dm6]	A	T	2.737e^-4	0.75	INTRON CG34356
3L	22084716	3L_22084716_SNP [dm3] 3L_22091616_SNP [dm6]	T	A	2.740e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
X	19879368	X_19879368_SNP [dm3] X_19985335_SNP [dm6]	C	G	2.740e^-4	0.75	INTERGENIC
3L	2171720	3L_2171720_SNP [dm3] 3L_2171720_SNP [dm6]	C	A	2.747e^-4	0.75	UPSTREAM CG5704 EXON CR15821
X	18734745	X_18734745_SNP [dm3] X_18840712_SNP [dm6]	G	C	2.754e^-4	0.75	SYNONYMOUS_CODING Pvf1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	1686719	2L_1686719_SNP [dm3] 2L_1686719_SNP [dm6]	G	T	2.759e^-4	0.75	INTRON chinmo
3L	22224115	3L_22224115_SNP [dm3] 3L_22231015_SNP [dm6]	G	T	2.761e^-4	0.75	INTRON olf413
2R	11910520	2R_11910520_SNP [dm3] 2R_16023015_SNP [dm6]	C	T	2.765e^-4	0.75	INTRON CG8399
3L	11359081	3L_11359081_SNP [dm3] 3L_11365981_SNP [dm6]	T	C	2.767e^-4	0.75	DOWNSTREAM CR45036 INTERGENIC	TF binding site mE1_TFBS_cad
X	14541915	X_14541915_SNP [dm3] X_14647882_SNP [dm6]	G	A	2.767e^-4	0.75	INTRON NetA	TF binding site BDTNP1_TFBS_twi
3L	11775985	3L_11775985_SNP [dm3] 3L_11782885_SNP [dm6]	C	A	2.769e^-4	0.75	INTRON Pi3K68D	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	14857898	2R_14857898_SNP [dm3] 2R_18970393_SNP [dm6]	G	A	2.774e^-4	0.75	SYNONYMOUS_CODING prod DOWNSTREAM CG15107	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
X	18418339	X_18418339_SNP [dm3] X_18524306_SNP [dm6]	T	A	2.775e^-4	0.75	INTRON Bx	TF binding site BDTNP1_TFBS_dl mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
2L	12721903	2L_12721903_SNP [dm3] 2L_12721903_SNP [dm6]	G	C	2.782e^-4	0.75	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_Ubx
X	2712957	X_2712957_SNP [dm3] X_2818924_SNP [dm6]	G	C	2.788e^-4	0.75	INTRON kirre
2L	6292736	2L_6292736_SNP [dm3] 2L_6292736_SNP [dm6]	C	G	2.789e^-4	0.75	INTRON Ddr
2L	6566668	2L_6566668_SNP [dm3] 2L_6566668_SNP [dm6]	T	C	2.798e^-4	0.75	UPSTREAM CG13766 INTERGENIC
2L	19679145	2L_19679145_SNP [dm3] 2L_19679145_SNP [dm6]	A	C	2.801e^-4	0.75	INTRON Lar
3L	22187890	3L_22187890_SNP [dm3] 3L_22194790_SNP [dm6]	A	G	2.804e^-4	0.75	INTRON olf413
3L	22187894	3L_22187894_INS [dm3] 3L_22194794_INS [dm6]	G	GAACCTTGGTTTT...	2.804e^-4	0.75	INTRON olf413
3L	5099642	3L_5099642_SNP [dm3] 3L_5099642_SNP [dm6]	T	C	2.812e^-4	0.75	EXON CR34047
2L	1302755	2L_1302755_SNP [dm3] 2L_1302755_SNP [dm6]	G	A	2.822e^-4	0.75	INTERGENIC
3R	21516698	3R_21516698_SNP [dm3] 3R_25690976_SNP [dm6]	G	C	2.822e^-4	0.75	INTERGENIC
3L	16446876	3L_16446876_SNP [dm3] 3L_16453776_SNP [dm6]	C	T	2.830e^-4	0.75	INTRON CG33158
2L	6988388	2L_6988388_SNP [dm3] 2L_6988388_SNP [dm6]	C	A	2.833e^-4	0.75	INTRON uif
3L	22230668	3L_22230668_SNP [dm3] 3L_22237568_SNP [dm6]	C	T	2.838e^-4	0.75	INTRON olf413
2L	6566388	2L_6566388_SNP [dm3] 2L_6566388_SNP [dm6]	G	T	2.842e^-4	0.75	UPSTREAM CG13766 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	18099929	2R_18099929_SNP [dm3] 2R_22212424_SNP [dm6]	G	A	2.843e^-4	0.75	UTR_3_PRIME CG11291 UPSTREAM ari-2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	5900259	X_5900259_SNP [dm3] X_6006226_SNP [dm6]	G	T	2.844e^-4	0.75	DOWNSTREAM CR44498 INTERGENIC
X	7079516	X_7079516_SNP [dm3] X_7185483_SNP [dm6]	G	A	2.849e^-4	0.75	INTRON CG9650 & 1 other	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	15195014	3R_15195014_SNP [dm3] 3R_19369292_SNP [dm6]	G	A	2.855e^-4	0.75	SYNONYMOUS_CODING Ino80
X	9001046	X_9001046_SNP [dm3] X_9107013_SNP [dm6]	A	T	2.860e^-4	0.75	UPSTREAM Arfrp1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	16246069	X_16246069_SNP [dm3] X_16352036_SNP [dm6]	A	G	2.871e^-4	0.75	INTRON sl	TF binding site mE1_TFBS_cad
2L	21082085	2L_21082085_SNP [dm3] 2L_21082085_SNP [dm6]	T	A	2.880e^-4	0.75	NON_SYNONYMOUS_CODING CG33511 DOWNSTREAM CG33510
X	5384232	X_5384232_SNP [dm3] X_5490199_SNP [dm6]	A	T	2.883e^-4	0.75	INTRON SPR
2R	13950941	2R_13950941_SNP [dm3] 2R_18063436_SNP [dm6]	G	A	2.885e^-4	0.75	INTRON CG34386
2L	13745910	2L_13745910_INS [dm3] 2L_13745910_INS [dm6]	T	TAT	2.893e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	15174352	X_15174352_SNP [dm3] X_15280319_SNP [dm6]	C	T	2.896e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	15253108	3L_15253108_SNP [dm3] 3L_15260008_SNP [dm6]	A	G	2.905e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_inv
3R	22271377	3R_22271377_SNP [dm3] 3R_26445655_SNP [dm6]	A	T	2.914e^-4	0.75	INTRON tx
2L	1539277	2L_1539277_SNP [dm3] 2L_1539277_SNP [dm6]	T	A	2.920e^-4	0.75	INTERGENIC
3L	7431226	3L_7431226_SNP [dm3] 3L_7438126_SNP [dm6]	G	T	2.929e^-4	0.75	UPSTREAM CG14835 DOWNSTREAM sphinx1 INTRON CG42458
2L	14626224	2L_14626224_SNP [dm3] 2L_14626224_SNP [dm6]	T	A	2.929e^-4	0.75	INTRON osp
2R	16064557	2R_16064557_SNP [dm3] 2R_20177052_SNP [dm6]	C	T	2.937e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	15703156	2R_15703156_SNP [dm3] 2R_19815651_SNP [dm6]	G	A	2.938e^-4	0.75	INTRON Obp56h	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	24484152	3R_24484152_SNP [dm3] 3R_28658430_SNP [dm6]	T	A	2.940e^-4	0.75	INTERGENIC
2R	7659934	2R_7659934_SNP [dm3] 2R_11772429_SNP [dm6]	C	G	2.946e^-4	0.75	INTRON ths
2R	7071809	2R_7071809_INS [dm3] 2R_11184304_INS [dm6]	C	CTCTCCCTC	2.946e^-4	0.75	INTRON shn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	8805477	3L_8805477_SNP [dm3] 3L_8812377_SNP [dm6]	G	A	2.947e^-4	0.75	INTERGENIC
3L	1843653	3L_1843653_SNP [dm3] 3L_1843653_SNP [dm6]	A	T	2.960e^-4	0.75	INTERGENIC
3L	22120145	3L_22120145_SNP [dm3] 3L_22127045_SNP [dm6]	A	G	2.960e^-4	0.75	INTERGENIC
2R	12244458	2R_12244458_SNP [dm3] 2R_16356953_SNP [dm6]	G	A	2.965e^-4	0.75	UPSTREAM CR43416 INTERGENIC
3L	803509	3L_803509_SNP [dm3] 3L_803509_SNP [dm6]	T	C	2.987e^-4	0.75	UTR_3_PRIME CG13898	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
2L	14513786	2L_14513786_SNP [dm3] 2L_14513786_SNP [dm6]	G	T	2.991e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2L	6737514	2L_6737514_SNP [dm3] 2L_6737514_SNP [dm6]	C	T	2.992e^-4	0.75	SYNONYMOUS_CODING TTLL3A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	2171740	3L_2171740_SNP [dm3] 3L_2171740_SNP [dm6]	T	A	3.002e^-4	0.75	UPSTREAM CG5704 EXON CR15821
3R	3487981	3R_3487981_SNP [dm3] 3R_7662259_SNP [dm6]	A	C	3.002e^-4	0.75	UTR_5_PRIME Nlg1
2L	4299883	2L_4299883_SNP [dm3] 2L_4299883_SNP [dm6]	C	T	3.005e^-4	0.75	INTRON tutl
2L	19818310	2L_19818310_INS [dm3] 2L_19818310_INS [dm6]	T	TAT	3.012e^-4	0.75	INTRON sick	transposable element FlyBase
2L	14626087	2L_14626087_SNP [dm3] 2L_14626087_SNP [dm6]	C	A	3.014e^-4	0.75	INTRON osp
X	20483962	X_20483962_SNP [dm3] X_20612935_SNP [dm6]	A	G	3.019e^-4	0.75	INTRON RunxA	TF binding site mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA
2R	9052171	2R_9052171_SNP [dm3] 2R_13164666_SNP [dm6]	T	G	3.025e^-4	0.75	UPSTREAM CG15870 INTRON GLaz
2L	13694896	2L_13694896_SNP [dm3] 2L_13694896_SNP [dm6]	G	A	3.031e^-4	0.75	INTRON CG31814
3L	9160076	3L_9160076_SNP [dm3] 3L_9166976_SNP [dm6]	T	C	3.034e^-4	0.75	INTRON Rdl
2L	6565419	2L_6565419_SNP [dm3] 2L_6565419_SNP [dm6]	C	T	3.039e^-4	0.75	SYNONYMOUS_CODING CG13766 DOWNSTREAM Ent2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	3984219	2L_3984219_SNP [dm3] 2L_3984219_SNP [dm6]	C	G	3.046e^-4	0.75	INTRON fred
X	8424359	X_8424359_SNP [dm3] X_8530326_SNP [dm6]	G	A	3.062e^-4	0.75	UPSTREAM PIP82 INTRON Nrg	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	4360664	3R_4360664_SNP [dm3] 3R_8534942_SNP [dm6]	T	C	3.066e^-4	0.75	INTERGENIC
X	8927791	X_8927791_SNP [dm3] X_9033758_SNP [dm6]	A	G	3.067e^-4	0.75	INTRON CR43836 & 1 other
3L	2171760	3L_2171760_SNP [dm3] 3L_2171760_SNP [dm6]	A	T	3.080e^-4	0.75	UPSTREAM CG5704 EXON CR15821
2L	9403338	2L_9403338_SNP [dm3] 2L_9403338_SNP [dm6]	G	C	3.083e^-4	0.75	INTRON Shawl
X	9934168	X_9934168_SNP [dm3] X_10040135_SNP [dm6]	C	T	3.089e^-4	0.75	NON_SYNONYMOUS_CODING Cht6 INTRON Cht6
3R	21509607	3R_21509607_SNP [dm3] 3R_25683885_SNP [dm6]	G	A	3.098e^-4	0.75	UTR_3_PRIME RpL27 DOWNSTREAM RpL27 & 1 other
3L	8963503	3L_8963503_SNP [dm3] 3L_8970403_SNP [dm6]	G	T	3.104e^-4	0.75	SYNONYMOUS_CODING CG5026
2L	9925577	2L_9925577_SNP [dm3] 2L_9925577_SNP [dm6]	T	G	3.105e^-4	0.75	UPSTREAM TbCMF46 INTRON CG42366
3L	14910224	3L_14910224_SNP [dm3] 3L_14917124_SNP [dm6]	C	T	3.106e^-4	0.75	INTRON DCX-EMAP
3L	8963470	3L_8963470_SNP [dm3] 3L_8970370_SNP [dm6]	A	T	3.106e^-4	0.75	SYNONYMOUS_CODING CG5026
3R	5076316	3R_5076316_SNP [dm3] 3R_9250594_SNP [dm6]	C	T	3.108e^-4	0.75	INTRON CG8420
2L	12292622	2L_12292622_SNP [dm3] 2L_12292622_SNP [dm6]	A	G	3.110e^-4	0.75	INTRON aret	TF binding site BDTNP1_TFBS_twi
3L	5527752	3L_5527752_SNP [dm3] 3L_5534652_SNP [dm6]	T	C	3.114e^-4	0.75	DOWNSTREAM CG13285 INTRON CG13285
2L	14615731	2L_14615731_SNP [dm3] 2L_14615731_SNP [dm6]	A	T	3.114e^-4	0.75	UPSTREAM Adhr & 1 other INTRON osp & 2 others
3R	7551026	3R_7551026_SNP [dm3] 3R_11725304_SNP [dm6]	A	G	3.115e^-4	0.75	INTRON CG12594	TF binding site mE1_TFBS_inv
3R	12197170	3R_12197170_SNP [dm3] 3R_16371448_SNP [dm6]	C	T	3.126e^-4	0.75	UPSTREAM CG10317 DOWNSTREAM CR45193 INTERGENIC
2L	19810837	2L_19810837_SNP [dm3] 2L_19810837_SNP [dm6]	C	T	3.134e^-4	0.75	INTRON sick EXON snRNA:U4:38AB	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
3L	1845477	3L_1845477_SNP [dm3] 3L_1845477_SNP [dm6]	A	G	3.148e^-4	0.75	INTERGENIC
2L	18311546	2L_18311546_SNP [dm3] 2L_18311546_SNP [dm6]	T	C	3.150e^-4	0.75	DOWNSTREAM CR45721 INTERGENIC
X	21990920	X_21990920_SNP [dm3] X_22589084_SNP [dm6]	G	T	3.151e^-4	0.75	INTRON Cda4	TF binding site BDTNP1_TFBS_sna
3L	20961213	3L_20961213_SNP [dm3] 3L_20968113_SNP [dm6]	G	A	3.151e^-4	0.75	NON_SYNONYMOUS_CODING CG33287	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	12629904	2L_12629904_SNP [dm3] 2L_12629904_SNP [dm6]	T	A	3.158e^-4	0.75	INTRON Ref2
X	3326316	X_3326316_SNP [dm3] X_3432283_SNP [dm6]	C	T	3.159e^-4	0.75	INTRON CR44999 & 1 other
2L	21082027	2L_21082027_SNP [dm3] 2L_21082027_SNP [dm6]	G	C	3.167e^-4	0.75	NON_SYNONYMOUS_CODING CG33511 DOWNSTREAM tadr & 1 other
2L	12888953	2L_12888953_SNP [dm3] 2L_12888953_SNP [dm6]	T	G	3.168e^-4	0.75	INTERGENIC
2L	4299886	2L_4299886_DEL [dm3] 2L_4299886_DEL [dm6]	ATA	A	3.176e^-4	0.75	INTRON tutl
X	21882694	X_21882694_SNP [dm3] X_22480858_SNP [dm6]	T	C	3.179e^-4	0.75	UTR_5_PRIME CG12576	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	14910271	3L_14910271_SNP [dm3] 3L_14917171_SNP [dm6]	G	C	3.181e^-4	0.75	INTRON DCX-EMAP
2L	14626062	2L_14626062_SNP [dm3] 2L_14626062_SNP [dm6]	A	T	3.190e^-4	0.75	INTRON osp
3R	9497020	3R_9497020_SNP [dm3] 3R_13671298_SNP [dm6]	G	T	3.196e^-4	0.75	SPLICE_SITE_REGION Task6 INTRON Task6	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12318467	X_12318467_DEL [dm3] X_12424434_DEL [dm6]	AA	A	3.198e^-4	0.75	INTERGENIC
2R	15703160	2R_15703160_INS [dm3] 2R_19815655_INS [dm6]	A	AACA	3.199e^-4	0.75	INTRON Obp56h	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	12765271	2L_12765271_SNP [dm3] 2L_12765271_SNP [dm6]	C	G	3.203e^-4	0.75	INTERGENIC
2L	12765272	2L_12765272_SNP [dm3] 2L_12765272_SNP [dm6]	A	G	3.204e^-4	0.75	INTERGENIC
2R	15064675	2R_15064675_SNP [dm3] 2R_19177170_SNP [dm6]	C	T	3.211e^-4	0.75	DOWNSTREAM CG10737 INTRON CG10737
3R	19567715	3R_19567715_SNP [dm3] 3R_23741993_SNP [dm6]	T	A	3.213e^-4	0.75	INTRON Hmgcr
3R	13411081	3R_13411081_SNP [dm3] 3R_17585359_SNP [dm6]	T	C	3.214e^-4	0.75	INTERGENIC
2L	3701938	2L_3701938_SNP [dm3] 2L_3701938_SNP [dm6]	A	C	3.219e^-4	0.75	UPSTREAM CR44311 DOWNSTREAM Sfp24C1 & 1 other INTRON CG43145
3L	14081468	3L_14081468_SNP [dm3] 3L_14088368_SNP [dm6]	T	C	3.223e^-4	0.75	INTERGENIC
2R	9658051	2R_9658051_DEL [dm3] 2R_13770546_DEL [dm6]	TTC	T	3.224e^-4	0.75	INTRON Cpr50Ca	TF binding site mE1_TFBS_HSA
X	8339964	X_8339964_SNP [dm3] X_8445931_SNP [dm6]	G	A	3.228e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6227687	2L_6227687_SNP [dm3] 2L_6227687_SNP [dm6]	C	A	3.229e^-4	0.75	DOWNSTREAM Ugt37b1 INTERGENIC
3R	11818387	3R_11818387_SNP [dm3] 3R_15992665_SNP [dm6]	A	G	3.229e^-4	0.75	INTRON srp & 1 other	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
2L	5743200	2L_5743200_SNP [dm3] 2L_5743200_SNP [dm6]	G	A	3.230e^-4	0.75	INTRON CG11030
2R	9739981	2R_9739981_SNP [dm3] 2R_13852476_SNP [dm6]	C	T	3.232e^-4	0.75	SYNONYMOUS_CODING CG30485 DOWNSTREAM CG6543
2L	4264749	2L_4264749_SNP [dm3] 2L_4264749_SNP [dm6]	C	T	3.237e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	3044514	3L_3044514_SNP [dm3] 3L_3044514_SNP [dm6]	G	T	3.245e^-4	0.75	UTR_3_PRIME scramb2 DOWNSTREAM Jafrac2	TF binding site mE1_TFBS_HSA
2R	15954846	2R_15954846_SNP [dm3] 2R_20067341_SNP [dm6]	G	C	3.247e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	14700604	3L_14700604_SNP [dm3] 3L_14707504_SNP [dm6]	C	T	3.252e^-4	0.75	INTRON ome	TF binding site mE1_TFBS_inv
2L	12765279	2L_12765279_SNP [dm3] 2L_12765279_SNP [dm6]	G	A	3.252e^-4	0.75	INTERGENIC
X	20885684	X_20885684_SNP [dm3] X_21014657_SNP [dm6]	A	C	3.253e^-4	0.75	INTERGENIC
3L	7883924	3L_7883924_SNP [dm3] 3L_7890824_SNP [dm6]	T	A	3.254e^-4	0.75	INTRON CG32365
2L	18229019	2L_18229019_SNP [dm3] 2L_18229019_SNP [dm6]	G	A	3.256e^-4	0.75	INTRON CG42750
2L	12722038	2L_12722038_SNP [dm3] 2L_12722038_SNP [dm6]	A	T	3.257e^-4	0.75	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
2L	14626193	2L_14626193_SNP [dm3] 2L_14626193_SNP [dm6]	T	A	3.257e^-4	0.75	INTRON osp
3R	16468918	3R_16468918_SNP [dm3] 3R_20643196_SNP [dm6]	C	T	3.259e^-4	0.75	SYNONYMOUS_CODING Lrrk DOWNSTREAM GluRIIE
2L	12797198	2L_12797198_SNP [dm3] 2L_12797198_SNP [dm6]	A	T	3.264e^-4	0.75	INTERGENIC
2L	6070866	2L_6070866_SNP [dm3] 2L_6070866_SNP [dm6]	C	A	3.267e^-4	0.75	UPSTREAM Kr-h2 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
2R	9754853	2R_9754853_SNP [dm3] 2R_13867348_SNP [dm6]	C	A	3.268e^-4	0.75	INTRON shot
2L	13698875	2L_13698875_DEL [dm3] 2L_13698875_DEL [dm6]	CAACCAC	C	3.271e^-4	0.75	INTRON CG31814
3L	9631367	3L_9631367_SNP [dm3] 3L_9638267_SNP [dm6]	A	G	3.274e^-4	0.75	SYNONYMOUS_CODING CG8329 INTRON fry	TF binding site mE1_TFBS_cad
X	9000105	X_9000105_SNP [dm3] X_9106072_SNP [dm6]	G	A	3.279e^-4	0.75	UPSTREAM Arfrp1 INTRON Bx42	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3L	22191208	3L_22191208_SNP [dm3] 3L_22198108_SNP [dm6]	G	A	3.283e^-4	0.75	INTRON olf413
X	8902182	X_8902182_SNP [dm3] X_9008149_SNP [dm6]	T	C	3.286e^-4	0.75	INTRON rdgA & 1 other
3L	5525552	3L_5525552_SNP [dm3] 3L_5532452_SNP [dm6]	G	A	3.287e^-4	0.75	INTERGENIC
2R	9519746	2R_9519746_SNP [dm3] 2R_13632241_SNP [dm6]	G	T	3.291e^-4	0.75	INTRON fas
2L	9881373	2L_9881373_SNP [dm3] 2L_9881373_SNP [dm6]	T	G	3.294e^-4	0.75	INTRON nAChRalpha6
3R	9221186	3R_9221186_SNP [dm3] 3R_13395464_SNP [dm6]	G	C	3.300e^-4	0.75	UPSTREAM CCHa2 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA
3L	8558603	3L_8558603_SNP [dm3] 3L_8565503_SNP [dm6]	A	G	3.303e^-4	0.75	SYNONYMOUS_CODING rhea UTR_3_PRIME rhea	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	1628823	2L_1628823_SNP [dm3] 2L_1628823_SNP [dm6]	C	T	3.312e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	16637300	2L_16637300_SNP [dm3] 2L_16637300_SNP [dm6]	T	G	3.312e^-4	0.75	INTRON CG42389
3L	5826759	3L_5826759_SNP [dm3] 3L_5833659_SNP [dm6]	G	C	3.319e^-4	0.75	INTRON vn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3L	8592471	3L_8592471_DEL [dm3] 3L_8599371_DEL [dm6]	GG	G	3.326e^-4	0.75	UTR_3_PRIME CG43078 DOWNSTREAM Nelf-E
2L	16362249	2L_16362249_SNP [dm3] 2L_16362249_SNP [dm6]	A	T	3.332e^-4	0.75	INTERGENIC
3L	13796683	3L_13796683_DEL [dm3] 3L_13803583_DEL [dm6]	TT	T	3.333e^-4	0.75	UPSTREAM bru-3 INTERGENIC
3L	8839957	3L_8839957_SNP [dm3] 3L_8846857_SNP [dm6]	C	T	3.335e^-4	0.75	INTRON dally
2L	16359855	2L_16359855_SNP [dm3] 2L_16359855_SNP [dm6]	G	C	3.337e^-4	0.75	INTERGENIC
3L	22200307	3L_22200307_SNP [dm3] 3L_22207207_SNP [dm6]	G	T	3.337e^-4	0.75	INTRON olf413
X	3289992	X_3289992_SNP [dm3] X_3395959_SNP [dm6]	T	C	3.338e^-4	0.75	INTRON CR44999 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	13173586	3L_13173586_SNP [dm3] 3L_13180486_SNP [dm6]	C	T	3.338e^-4	0.75	INTERGENIC
X	5209148	X_5209148_SNP [dm3] X_5315115_SNP [dm6]	T	A	3.345e^-4	0.75	UTR_3_PRIME CG4198 DOWNSTREAM CG15930	TF binding site mE1_TFBS_chinmo
2L	13691125	2L_13691125_SNP [dm3] 2L_13691125_SNP [dm6]	G	T	3.345e^-4	0.75	INTRON CG31814
2L	3698472	2L_3698472_SNP [dm3] 2L_3698472_SNP [dm6]	C	A	3.347e^-4	0.75	UTR_3_PRIME CG10031 UPSTREAM CG3604 & 1 other
3L	9310689	3L_9310689_SNP [dm3] 3L_9317589_SNP [dm6]	G	A	3.347e^-4	0.75	INTERGENIC
3L	22141516	3L_22141516_SNP [dm3] 3L_22148416_SNP [dm6]	C	T	3.347e^-4	0.75	INTRON olf413	TF binding site BDTNP1_TFBS_da mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens
X	16401601	X_16401601_INS [dm3] X_16507568_INS [dm6]	G	GA	3.354e^-4	0.75	INTRON para
3L	6855381	3L_6855381_SNP [dm3] 3L_6862281_SNP [dm6]	T	C	3.366e^-4	0.75	INTERGENIC
2L	12765277	2L_12765277_SNP [dm3] 2L_12765277_SNP [dm6]	C	A	3.367e^-4	0.75	INTERGENIC
X	13312799	X_13312799_SNP [dm3] X_13418766_SNP [dm6]	C	T	3.374e^-4	0.75	SYNONYMOUS_CODING Set2	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	10560649	3L_10560649_SNP [dm3] 3L_10567549_SNP [dm6]	A	G	3.376e^-4	0.75	INTRON A2bp1	TF binding site mE1_TFBS_inv
2L	17630457	2L_17630457_SNP [dm3] 2L_17630457_SNP [dm6]	A	T	3.380e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	14626217	2L_14626217_SNP [dm3] 2L_14626217_SNP [dm6]	T	A	3.387e^-4	0.75	INTRON osp
2R	3989680	2R_3989680_SNP [dm3] 2R_8102175_SNP [dm6]	G	A	3.388e^-4	0.75	UTR_3_PRIME CG11210 DOWNSTREAM Cul4
2L	5743385	2L_5743385_INS [dm3] 2L_5743385_INS [dm6]	T	TTATTCCC	3.395e^-4	0.75	INTRON CG11030
3R	21864941	3R_21864941_INS [dm3] 3R_26039219_INS [dm6]	C	CAATAAAATATTACTTC...	3.396e^-4	0.75	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_GATAe mE1_TFBS_sens
3R	21864947	3R_21864947_SNP [dm3] 3R_26039225_SNP [dm6]	A	G	3.396e^-4	0.75	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_GATAe mE1_TFBS_sens
X	18992690	X_18992690_SNP [dm3] X_19098657_SNP [dm6]	A	T	3.403e^-4	0.75	INTERGENIC
2L	14626266	2L_14626266_SNP [dm3] 2L_14626266_SNP [dm6]	C	T	3.407e^-4	0.75	INTRON osp
3L	17834199	3L_17834199_SNP [dm3] 3L_17841099_SNP [dm6]	G	T	3.409e^-4	0.75	UPSTREAM CR45175 DOWNSTREAM CG5567 INTRON CG5577
2L	12801555	2L_12801555_SNP [dm3] 2L_12801555_SNP [dm6]	C	G	3.410e^-4	0.75	INTERGENIC
X	7556062	X_7556062_SNP [dm3] X_7662029_SNP [dm6]	T	C	3.411e^-4	0.75	INTRON ct
3L	1463167	3L_1463167_SNP [dm3] 3L_1463167_SNP [dm6]	C	T	3.412e^-4	0.75	UPSTREAM CR44842 & 1 other INTRON Ptp61F	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	9329052	3L_9329052_SNP [dm3] 3L_9335952_SNP [dm6]	G	A	3.420e^-4	0.75	UPSTREAM PGRP-LA INTRON PGRP-LA
3R	5993765	3R_5993765_SNP [dm3] 3R_10168043_SNP [dm6]	T	C	3.422e^-4	0.75	INTRON Best1
X	20442492	X_20442492_DEL [dm3] X_20571465_DEL [dm6]	CACC	C	3.422e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	21708691	2L_21708691_SNP [dm3] 2L_21708691_SNP [dm6]	T	C	3.427e^-4	0.75	INTRON CG31619	transposable element FlyBase
X	20900748	X_20900748_SNP [dm3] X_21029721_SNP [dm6]	C	T	3.430e^-4	0.75	UTR_3_PRIME CG1529 DOWNSTREAM CG1529
3L	2032541	3L_2032541_SNP [dm3] 3L_2032541_SNP [dm6]	C	T	3.435e^-4	0.75	INTERGENIC
2R	17578584	2R_17578584_SNP [dm3] 2R_21691079_SNP [dm6]	C	T	3.441e^-4	0.75	NON_SYNONYMOUS_CODING CG42497 UTR_5_PRIME Tim10 UPSTREAM CG42496 & 1 other DOWNSTREAM CG10307	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	7553297	3L_7553297_SNP [dm3] 3L_7560197_SNP [dm6]	G	A	3.447e^-4	0.75	UPSTREAM CG14837 INTERGENIC
2L	12836859	2L_12836859_SNP [dm3] 2L_12836859_SNP [dm6]	G	A	3.448e^-4	0.75	INTERGENIC
3L	14700546	3L_14700546_SNP [dm3] 3L_14707446_SNP [dm6]	A	T	3.454e^-4	0.75	INTRON ome	TF binding site BDTNP1_TFBS_z mE1_TFBS_inv
3L	2124549	3L_2124549_SNP [dm3] 3L_2124549_SNP [dm6]	A	G	3.454e^-4	0.75	SYNONYMOUS_CODING zormin INTRON zormin
X	4296253	X_4296253_SNP [dm3] X_4402220_SNP [dm6]	C	T	3.458e^-4	0.75	INTRON CR32773	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	3701928	2L_3701928_SNP [dm3] 2L_3701928_SNP [dm6]	G	A	3.461e^-4	0.75	UPSTREAM CR44311 DOWNSTREAM Sfp24C1 & 1 other INTRON CG43145
2L	3376830	2L_3376830_SNP [dm3] 2L_3376830_SNP [dm6]	C	T	3.468e^-4	0.75	UPSTREAM Ptpa & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3R	8121903	3R_8121903_SNP [dm3] 3R_12296181_SNP [dm6]	T	A	3.468e^-4	0.75	DOWNSTREAM svp INTRON svp
3L	2800633	3L_2800633_SNP [dm3] 3L_2800633_SNP [dm6]	C	T	3.475e^-4	0.75	INTRON CG43444	TF binding site mE1_TFBS_inv
3R	12556685	3R_12556685_SNP [dm3] 3R_16730963_SNP [dm6]	G	T	3.475e^-4	0.75	INTRON Ubx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
3L	5543890	3L_5543890_SNP [dm3] 3L_5550790_SNP [dm6]	C	T	3.478e^-4	0.75	SYNONYMOUS_CODING CG10625
X	20900440	X_20900440_SNP [dm3] X_21029413_SNP [dm6]	G	T	3.484e^-4	0.75	UTR_3_PRIME CG1529 DOWNSTREAM CG1529	transposable element FlyBase
3L	21037364	3L_21037364_SNP [dm3] 3L_21044264_SNP [dm6]	A	G	3.487e^-4	0.75	INTRON siz	TF binding site mE1_TFBS_sens
3R	21690644	3R_21690644_SNP [dm3] 3R_25864922_SNP [dm6]	A	G	3.487e^-4	0.75	INTRON CG5890
3L	17756004	3L_17756004_SNP [dm3] 3L_17762904_SNP [dm6]	T	A	3.488e^-4	0.75	UTR_3_PRIME CG32181 INTRON Adgf-A & 1 other
3R	22040901	3R_22040901_SNP [dm3] 3R_26215179_SNP [dm6]	A	G	3.496e^-4	0.75	INTERGENIC
2L	9197035	2L_9197035_SNP [dm3] 2L_9197035_SNP [dm6]	A	C	3.500e^-4	0.75	INTRON tai
3L	16821903	3L_16821903_SNP [dm3] 3L_16828803_SNP [dm6]	A	T	3.502e^-4	0.75	START_GAINED CG13024 UTR_5_PRIME CG13024	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	12444112	2R_12444112_SNP [dm3] 2R_16556607_SNP [dm6]	A	T	3.505e^-4	0.75	INTRON Syn2
2L	14613315	2L_14613315_SNP [dm3] 2L_14613315_SNP [dm6]	C	T	3.513e^-4	0.75	INTRON osp EXON CR43411	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2L	9197010	2L_9197010_SNP [dm3] 2L_9197010_SNP [dm6]	T	A	3.517e^-4	0.75	INTRON tai
2L	14513789	2L_14513789_SNP [dm3] 2L_14513789_SNP [dm6]	A	T	3.517e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
3R	2631701	3R_2631701_SNP [dm3] 3R_6805979_SNP [dm6]	G	A	3.520e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	21889771	X_21889771_SNP [dm3] X_22487935_SNP [dm6]	G	T	3.523e^-4	0.75	DOWNSTREAM Cp110 INTRON l_1_G0196 EXON CR43493	TF binding site mE1_TFBS_Trl
2L	13823447	2L_13823447_SNP [dm3] 2L_13823447_SNP [dm6]	T	C	3.529e^-4	0.75	SYNONYMOUS_CODING b DOWNSTREAM tam	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	9554875	X_9554875_SNP [dm3] X_9660842_SNP [dm6]	G	C	3.536e^-4	0.75	INTRON CG3106
2L	12797795	2L_12797795_SNP [dm3] 2L_12797795_SNP [dm6]	G	A	3.537e^-4	0.75	INTERGENIC
3L	19510497	3L_19510497_SNP [dm3] 3L_19517397_SNP [dm6]	T	C	3.539e^-4	0.75	DOWNSTREAM Cpr76Ba INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	18316285	2L_18316285_SNP [dm3] 2L_18316285_SNP [dm6]	A	T	3.542e^-4	0.75	INTERGENIC
3L	18250481	3L_18250481_SNP [dm3] 3L_18257381_SNP [dm6]	T	G	3.549e^-4	0.75	INTERGENIC
3R	5992683	3R_5992683_SNP [dm3] 3R_10166961_SNP [dm6]	C	T	3.549e^-4	0.75	INTRON Best1
2L	12724966	2L_12724966_SNP [dm3] 2L_12724966_SNP [dm6]	T	G	3.560e^-4	0.75	INTRON MRP
3R	14945408	3R_14945408_SNP [dm3] 3R_19119686_SNP [dm6]	C	T	3.566e^-4	0.75	INTRON CG6040
3R	15453633	3R_15453633_DEL [dm3] 3R_19627911_DEL [dm6]	TCAT	T	3.567e^-4	0.75	UPSTREAM CG6231 INTRON CG6231	TF binding site BDTNP1_TFBS_dl
X	4786610	X_4786610_SNP [dm3] X_4892577_SNP [dm6]	G	A	3.567e^-4	0.75	INTRON CG42594
X	21991462	X_21991462_SNP [dm3] X_22589626_SNP [dm6]	G	A	3.568e^-4	0.75	INTRON Cda4	TF binding site BDTNP1_TFBS_dl
2L	4757956	2L_4757956_DEL [dm3] 2L_4757956_DEL [dm6]	AC	A	3.575e^-4	0.75	INTRON CG15630
2L	8036174	2L_8036174_SNP [dm3] 2L_8036174_SNP [dm6]	T	C	3.579e^-4	0.75	SYNONYMOUS_CODING Cka INTRON CG7367
X	19507525	X_19507525_SNP [dm3] X_19613492_SNP [dm6]	T	C	3.584e^-4	0.75	UPSTREAM Shawn INTRON Shawn & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3L	10937064	3L_10937064_DEL [dm3] 3L_10943964_DEL [dm6]	GC	G	3.588e^-4	0.75	UPSTREAM CG34050 INTERGENIC
2L	12721985	2L_12721985_SNP [dm3] 2L_12721985_SNP [dm6]	G	A	3.588e^-4	0.75	UPSTREAM MRP & 1 other INTRON MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
3R	8648162	3R_8648162_SNP [dm3] 3R_12822440_SNP [dm6]	C	A	3.593e^-4	0.75	INTERGENIC
3L	20876186	3L_20876186_SNP [dm3] 3L_20883086_SNP [dm6]	C	T	3.598e^-4	0.75	INTRON CG32432
2R	11025407	2R_11025407_SNP [dm3] 2R_15137902_SNP [dm6]	G	A	3.598e^-4	0.75	INTRON chn
3L	19961511	3L_19961511_INS [dm3] 3L_19968411_INS [dm6]	G	GTCGG	3.602e^-4	0.75	INTRON Ac76E
3L	22225876	3L_22225876_SNP [dm3] 3L_22232776_SNP [dm6]	C	T	3.607e^-4	0.75	INTRON olf413
3R	15629257	3R_15629257_SNP [dm3] 3R_19803535_SNP [dm6]	C	G	3.610e^-4	0.75	DOWNSTREAM tRNA:CR31471 INTRON bnl	TF binding site mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA
X	3999433	X_3999433_SNP [dm3] X_4105400_SNP [dm6]	A	G	3.614e^-4	0.75	SYNONYMOUS_CODING brn UPSTREAM cib	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
2L	3765143	2L_3765143_SNP [dm3] 2L_3765143_SNP [dm6]	A	T	3.618e^-4	0.75	UPSTREAM CG43703 INTRON CG43707	TF binding site mE1_TFBS_cad
3R	10854670	3R_10854670_SNP [dm3] 3R_15028948_SNP [dm6]	T	A	3.621e^-4	0.75	INTERGENIC
2L	12088449	2L_12088449_SNP [dm3] 2L_12088449_SNP [dm6]	T	G	3.627e^-4	0.75	DOWNSTREAM CR44593 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
X	8927823	X_8927823_SNP [dm3] X_9033790_SNP [dm6]	G	T	3.630e^-4	0.75	INTRON CR43836 & 1 other
2R	5505857	2R_5505857_SNP [dm3] 2R_9618352_SNP [dm6]	G	T	3.632e^-4	0.75	INTRON Mmp2
3L	22198129	3L_22198129_SNP [dm3] 3L_22205029_SNP [dm6]	C	T	3.632e^-4	0.75	INTRON olf413	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	14616027	2L_14616027_MNP [dm3] 2L_14616027_MNP [dm6]	TAC	ACA	3.644e^-4	0.75	UPSTREAM Adhr & 1 other INTRON osp & 2 others	TF binding site mE1_TFBS_cad
2L	1389718	2L_1389718_SNP [dm3] 2L_1389718_SNP [dm6]	C	T	3.647e^-4	0.75	INTRON lea	TF binding site mE1_TFBS_disco mE1_TFBS_HSA
3R	5118274	3R_5118274_SNP [dm3] 3R_9292552_SNP [dm6]	G	A	3.647e^-4	0.75	INTERGENIC
X	15196649	X_15196649_SNP [dm3] X_15302616_SNP [dm6]	C	T	3.650e^-4	0.75	INTRON gce	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3R	5996900	3R_5996900_SNP [dm3] 3R_10171178_SNP [dm6]	A	T	3.657e^-4	0.75	UTR_3_PRIME CG12814 UPSTREAM Best1	TF binding site mE1_TFBS_cad
3R	22906036	3R_22906036_SNP [dm3] 3R_27080314_SNP [dm6]	G	A	3.662e^-4	0.75	INTRON CG14257
3R	24639591	3R_24639591_SNP [dm3] 3R_28813869_SNP [dm6]	C	T	3.663e^-4	0.75	INTRON CG1646
X	18193155	X_18193155_SNP [dm3] X_18299122_SNP [dm6]	C	A	3.664e^-4	0.75	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
3L	14891476	3L_14891476_SNP [dm3] 3L_14898376_SNP [dm6]	A	T	3.668e^-4	0.75	INTERGENIC
2L	3893299	2L_3893299_SNP [dm3] 2L_3893299_SNP [dm6]	A	C	3.672e^-4	0.75	NON_SYNONYMOUS_CODING capu
2R	7071803	2R_7071803_SNP [dm3] 2R_11184298_SNP [dm6]	C	T	3.680e^-4	0.75	INTRON shn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	14141762	3L_14141762_SNP [dm3] 3L_14148662_SNP [dm6]	C	T	3.681e^-4	0.75	INTERGENIC	regulatory region REDfly_CRMs
3L	22187986	3L_22187986_DEL [dm3] 3L_22194886_DEL [dm6]	TCGTC	T	3.685e^-4	0.75	INTRON olf413	TF binding site mE1_TFBS_HSA
2L	11054310	2L_11054310_SNP [dm3] 2L_11054310_SNP [dm6]	C	T	3.691e^-4	0.75	INTRON Samuel	TF binding site BDTNP1_TFBS_dl
2L	6736946	2L_6736946_SNP [dm3] 2L_6736946_SNP [dm6]	T	C	3.691e^-4	0.75	NON_SYNONYMOUS_CODING TTLL3A DOWNSTREAM TTLL3B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo
2R	6925724	2R_6925724_SNP [dm3] 2R_11038219_SNP [dm6]	T	A	3.695e^-4	0.75	INTRON luna	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	3389984	2R_3389984_SNP [dm3] 2R_7502479_SNP [dm6]	T	C	3.696e^-4	0.75	SYNONYMOUS_CODING didum	TF binding site mE1_TFBS_cad
2R	7659971	2R_7659971_SNP [dm3] 2R_11772466_SNP [dm6]	C	T	3.703e^-4	0.75	INTRON ths
3L	17760418	3L_17760418_SNP [dm3] 3L_17767318_SNP [dm6]	A	C	3.704e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_inv
3R	12197147	3R_12197147_SNP [dm3] 3R_16371425_SNP [dm6]	C	T	3.714e^-4	0.75	UPSTREAM CG10317 DOWNSTREAM CR45193 INTERGENIC
2R	16918794	2R_16918794_SNP [dm3] 2R_21031289_SNP [dm6]	C	T	3.721e^-4	0.75	INTERGENIC
2R	15914229	2R_15914229_SNP [dm3] 2R_20026724_SNP [dm6]	A	C	3.721e^-4	0.75	INTERGENIC
2R	7702317	2R_7702317_SNP [dm3] 2R_11814812_SNP [dm6]	A	G	3.721e^-4	0.75	DOWNSTREAM ths INTERGENIC
3L	1575543	3L_1575543_SNP [dm3] 3L_1575543_SNP [dm6]	T	C	3.724e^-4	0.75	UTR_3_PRIME CG12004 DOWNSTREAM CG12004
2R	9754591	2R_9754591_SNP [dm3] 2R_13867086_SNP [dm6]	A	T	3.728e^-4	0.75	INTRON shot
2L	922002	2L_922002_DEL [dm3] 2L_922002_DEL [dm6]	GTTG	G	3.732e^-4	0.75	UPSTREAM CG4341 INTERGENIC
2L	1525011	2L_1525011_DEL [dm3] 2L_1525011_DEL [dm6]	CGTC	C	3.733e^-4	0.75	DOWNSTREAM Or22b INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	21689390	3R_21689390_SNP [dm3] 3R_25863668_SNP [dm6]	A	T	3.734e^-4	0.75	INTRON CG5890
3R	16755248	3R_16755248_SNP [dm3] 3R_20929526_SNP [dm6]	C	T	3.738e^-4	0.75	DOWNSTREAM hdly INTRON CG31191
3L	7739918	3L_7739918_SNP [dm3] 3L_7746818_SNP [dm6]	C	T	3.743e^-4	0.75	UPSTREAM CG13685 INTRON CG32373
3R	13035259	3R_13035259_SNP [dm3] 3R_17209537_SNP [dm6]	A	G	3.743e^-4	0.75	INTERGENIC
3L	7739916	3L_7739916_SNP [dm3] 3L_7746816_SNP [dm6]	G	C	3.748e^-4	0.75	UPSTREAM CG13685 INTRON CG32373
3R	21728185	3R_21728185_SNP [dm3] 3R_25902463_SNP [dm6]	A	G	3.749e^-4	0.75	UPSTREAM CG31089 DOWNSTREAM CR43259 & 1 other INTERGENIC
2L	9925164	2L_9925164_SNP [dm3] 2L_9925164_SNP [dm6]	A	T	3.753e^-4	0.75	UTR_5_PRIME CG42366 UPSTREAM TbCMF46
X	12373809	X_12373809_SNP [dm3] X_12479776_SNP [dm6]	A	G	3.754e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	4137180	3L_4137180_SNP [dm3] 3L_4137180_SNP [dm6]	A	G	3.754e^-4	0.75	SYNONYMOUS_CODING Rop	TF binding site mE1_TFBS_cad
X	7465482	X_7465482_SNP [dm3] X_7571449_SNP [dm6]	T	G	3.761e^-4	0.75	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	6925582	2R_6925582_SNP [dm3] 2R_11038077_SNP [dm6]	T	C	3.762e^-4	0.75	INTRON luna	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	17832949	3R_17832949_SNP [dm3] 3R_22007227_SNP [dm6]	C	T	3.763e^-4	0.75	UTR_3_PRIME Eip93F DOWNSTREAM Eip93F
X	3992795	X_3992795_SNP [dm3] X_4098762_SNP [dm6]	C	T	3.766e^-4	0.75	SYNONYMOUS_CODING CG6379	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9631355	3L_9631355_SNP [dm3] 3L_9638255_SNP [dm6]	A	G	3.768e^-4	0.75	SYNONYMOUS_CODING CG8329 INTRON fry	TF binding site mE1_TFBS_cad
2L	935453	2L_935453_SNP [dm3] 2L_935453_SNP [dm6]	T	A	3.769e^-4	0.75	INTRON CG4341	TF binding site mE1_TFBS_Trl
X	1955035	X_1955035_SNP [dm3] X_2061002_SNP [dm6]	C	T	3.774e^-4	0.75	INTRON Sik2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	8008998	3L_8008998_SNP [dm3] 3L_8015898_SNP [dm6]	G	T	3.775e^-4	0.75	INTRON nmo
2L	20488911	2L_20488911_SNP [dm3] 2L_20488911_SNP [dm6]	C	G	3.775e^-4	0.75	UPSTREAM CR45359 DOWNSTREAM CR45360 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	26764777	3R_26764777_SNP [dm3] 3R_30939055_SNP [dm6]	G	T	3.777e^-4	0.75	INTERGENIC
3R	24484189	3R_24484189_SNP [dm3] 3R_28658467_SNP [dm6]	A	G	3.781e^-4	0.75	INTERGENIC
3L	9778996	3L_9778996_SNP [dm3] 3L_9785896_SNP [dm6]	T	C	3.783e^-4	0.75	UTR_3_PRIME CG8177 DOWNSTREAM CG8177
3L	11754440	3L_11754440_SNP [dm3] 3L_11761340_SNP [dm6]	C	T	3.783e^-4	0.75	INTRON CG6024
2R	8428415	2R_8428415_SNP [dm3] 2R_12540910_SNP [dm6]	T	A	3.791e^-4	0.75	INTRON fra	TF binding site mE1_TFBS_cad
2R	14210088	2R_14210088_SNP [dm3] 2R_18322583_SNP [dm6]	A	G	3.797e^-4	0.75	INTRON sbb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Kr
2L	9312959	2L_9312959_SNP [dm3] 2L_9312959_SNP [dm6]	A	G	3.799e^-4	0.75	INTERGENIC
X	20838358	X_20838358_SNP [dm3] X_20967331_SNP [dm6]	T	G	3.802e^-4	0.75	INTERGENIC
3R	16468768	3R_16468768_SNP [dm3] 3R_20643046_SNP [dm6]	G	T	3.805e^-4	0.75	NON_SYNONYMOUS_CODING Lrrk
X	4329501	X_4329501_SNP [dm3] X_4435468_SNP [dm6]	T	C	3.805e^-4	0.75	INTRON CR32773 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_Trl
X	3999325	X_3999325_SNP [dm3] X_4105292_SNP [dm6]	A	C	3.808e^-4	0.75	SYNONYMOUS_CODING brn UPSTREAM cib	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
3R	8647763	3R_8647763_SNP [dm3] 3R_12822041_SNP [dm6]	G	A	3.808e^-4	0.75	INTERGENIC
2L	12351532	2L_12351532_SNP [dm3] 2L_12351532_SNP [dm6]	G	T	3.818e^-4	0.75	INTRON bru-2
2R	19226762	2R_19226762_SNP [dm3] 2R_23339239_SNP [dm6]	G	A	3.818e^-4	0.75	INTERGENIC
2L	13699847	2L_13699847_SNP [dm3] 2L_13699847_SNP [dm6]	C	A	3.821e^-4	0.75	INTRON CG31814
3R	22627245	3R_22627245_SNP [dm3] 3R_26801523_SNP [dm6]	A	T	3.826e^-4	0.75	INTRON Tl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	21841297	3L_21841297_SNP [dm3] 3L_21848197_SNP [dm6]	C	A	3.829e^-4	0.75	INTRON mub
2L	12176690	2L_12176690_SNP [dm3] 2L_12176690_SNP [dm6]	C	A	3.836e^-4	0.75	INTRON aret & 1 other
2L	3303825	2L_3303825_SNP [dm3] 2L_3303825_SNP [dm6]	A	T	3.839e^-4	0.75	UPSTREAM CG3277 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	21882835	X_21882835_SNP [dm3] X_22480999_SNP [dm6]	G	A	3.839e^-4	0.75	INTRON CG12576	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2L	10184428	2L_10184428_SNP [dm3] 2L_10184428_SNP [dm6]	A	G	3.843e^-4	0.75	INTRON Sur
2R	5505960	2R_5505960_SNP [dm3] 2R_9618455_SNP [dm6]	A	T	3.848e^-4	0.75	INTRON Mmp2
2L	2110932	2L_2110932_SNP [dm3] 2L_2110932_SNP [dm6]	T	C	3.856e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_bab1
X	8339956	X_8339956_INS [dm3] X_8445923_INS [dm6]	A	ATA	3.858e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12821581	X_12821581_SNP [dm3] X_12927548_SNP [dm6]	T	A	3.863e^-4	0.75	INTRON fne
2R	17334157	2R_17334157_SNP [dm3] 2R_21446652_SNP [dm6]	G	T	3.866e^-4	0.75	INTRON Sdc	insulator Insulator_Class_II.mE01
2L	3376962	2L_3376962_SNP [dm3] 2L_3376962_SNP [dm6]	T	G	3.866e^-4	0.75	UPSTREAM Ptpa & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
2L	4599105	2L_4599105_SNP [dm3] 2L_4599105_SNP [dm6]	A	T	3.866e^-4	0.75	INTRON dp	TF binding site mE1_TFBS_sbb
2L	3701929	2L_3701929_SNP [dm3] 2L_3701929_SNP [dm6]	C	T	3.873e^-4	0.75	UPSTREAM CR44311 DOWNSTREAM Sfp24C1 & 1 other INTRON CG43145
3L	7883956	3L_7883956_SNP [dm3] 3L_7890856_SNP [dm6]	T	C	3.874e^-4	0.75	INTRON CG32365
3R	16468822	3R_16468822_SNP [dm3] 3R_20643100_SNP [dm6]	C	G	3.878e^-4	0.75	SYNONYMOUS_CODING Lrrk
3L	8973918	3L_8973918_DEL [dm3] 3L_8980818_DEL [dm6]	CTGCCATCCGGC...	C	3.881e^-4	0.75	UPSTREAM CG5644 & 1 other INTERGENIC
X	9857371	X_9857371_SNP [dm3] X_9963338_SNP [dm6]	G	T	3.882e^-4	0.75	DOWNSTREAM CG1791 INTERGENIC
X	4216110	X_4216110_SNP [dm3] X_4322077_SNP [dm6]	T	G	3.886e^-4	0.75	UPSTREAM norpA DOWNSTREAM CG2982 INTRON mRpL33	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA
X	19507507	X_19507507_SNP [dm3] X_19613474_SNP [dm6]	T	C	3.888e^-4	0.75	UPSTREAM Shawn INTRON Shawn & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3L	17759537	3L_17759537_SNP [dm3] 3L_17766437_SNP [dm6]	T	A	3.891e^-4	0.75	INTERGENIC	TF binding site mE1_TFBS_inv
3L	14242431	3L_14242431_SNP [dm3] 3L_14249331_SNP [dm6]	A	T	3.892e^-4	0.75	INTERGENIC
3R	4723928	3R_4723928_SNP [dm3] 3R_8898206_SNP [dm6]	G	T	3.892e^-4	0.75	INTRON pyd	TF binding site BDTNP1_TFBS_dl
3L	11060390	3L_11060390_SNP [dm3] 3L_11067290_SNP [dm6]	T	A	3.892e^-4	0.75	NON_SYNONYMOUS_CODING SuUR UTR_3_PRIME CG45101
2L	18304408	2L_18304408_SNP [dm3] 2L_18304408_SNP [dm6]	C	G	3.898e^-4	0.75	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	3338958	X_3338958_SNP [dm3] X_3444925_SNP [dm6]	T	A	3.900e^-4	0.75	INTRON CR44999 & 1 other
3R	10046143	3R_10046143_SNP [dm3] 3R_14220421_SNP [dm6]	A	C	3.902e^-4	0.75	UPSTREAM CG31326 DOWNSTREAM CG33109 INTERGENIC
3L	14901597	3L_14901597_SNP [dm3] 3L_14908497_SNP [dm6]	T	G	3.903e^-4	0.75	INTRON DCX-EMAP	TF binding site BDTNP1_TFBS_twi
3L	10911507	3L_10911507_SNP [dm3] 3L_10918407_SNP [dm6]	G	T	3.905e^-4	0.75	INTERGENIC
3R	980412	3R_980412_SNP [dm3] 3R_5154690_SNP [dm6]	A	T	3.905e^-4	0.75	INTRON dpr16
2R	7871690	2R_7871690_SNP [dm3] 2R_11984185_SNP [dm6]	G	A	3.909e^-4	0.75	SYNONYMOUS_CODING RnrS	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	2218510	X_2218510_SNP [dm3] X_2324477_SNP [dm6]	A	T	3.932e^-4	0.752	DOWNSTREAM CG14050 INTRON phl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	19881288	X_19881288_SNP [dm3] X_19987255_SNP [dm6]	A	T	3.951e^-4	0.752	INTERGENIC
X	17371001	X_17371001_SNP [dm3] X_17476968_SNP [dm6]	G	C	3.951e^-4	0.752	INTRON CG43658
2R	3017223	2R_3017223_SNP [dm3] 2R_7129718_SNP [dm6]	C	T	3.953e^-4	0.752	STOP_GAINED Cyp9b1 DOWNSTREAM Cyp9b2
2R	7698041	2R_7698041_SNP [dm3] 2R_11810536_SNP [dm6]	A	G	3.956e^-4	0.752	SYNONYMOUS_CODING ths
2L	12720555	2L_12720555_SNP [dm3] 2L_12720555_SNP [dm6]	C	T	3.957e^-4	0.752	INTRON CG5792 & 1 other	TF binding site mE1_TFBS_cad
2L	12767397	2L_12767397_SNP [dm3] 2L_12767397_SNP [dm6]	G	T	3.973e^-4	0.752	INTERGENIC	TF binding site mE1_TFBS_Stat92E
3L	5826766	3L_5826766_SNP [dm3] 3L_5833666_SNP [dm6]	T	G	3.977e^-4	0.752	INTRON vn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3L	19904048	3L_19904048_SNP [dm3] 3L_19910948_SNP [dm6]	A	C	3.979e^-4	0.752	SYNONYMOUS_CODING Prp3 UPSTREAM Mi-2 DOWNSTREAM CR43889	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_sens
X	19313699	X_19313699_SNP [dm3] X_19419666_SNP [dm6]	T	G	3.983e^-4	0.752	INTRON kek5
X	8375727	X_8375727_SNP [dm3] X_8481694_SNP [dm6]	A	G	3.984e^-4	0.752	UPSTREAM Cp38 INTRON CG33223
3R	21728169	3R_21728169_SNP [dm3] 3R_25902447_SNP [dm6]	C	T	3.985e^-4	0.752	UPSTREAM CG31089 DOWNSTREAM CR43259 & 1 other INTERGENIC
X	4521372	X_4521372_SNP [dm3] X_4627339_SNP [dm6]	G	A	3.997e^-4	0.752	DOWNSTREAM CG12184 & 1 other INTERGENIC
3L	7308616	3L_7308616_SNP [dm3] 3L_7315516_SNP [dm6]	A	T	3.999e^-4	0.752	INTERGENIC
X	3338927	X_3338927_SNP [dm3] X_3444894_SNP [dm6]	T	C	4.001e^-4	0.752	INTRON CR44999 & 1 other
X	12373808	X_12373808_SNP [dm3] X_12479775_SNP [dm6]	G	T	4.006e^-4	0.752	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	3338981	X_3338981_SNP [dm3] X_3444948_SNP [dm6]	G	T	4.010e^-4	0.752	INTRON CR44999 & 1 other
2L	18288541	2L_18288541_SNP [dm3] 2L_18288541_SNP [dm6]	C	T	4.012e^-4	0.752	INTERGENIC	TF binding site BDTNP1_TFBS_da
3R	15629661	3R_15629661_SNP [dm3] 3R_19803939_SNP [dm6]	T	A	4.017e^-4	0.752	INTRON bnl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	20899324	X_20899324_SNP [dm3] X_21028297_SNP [dm6]	T	G	4.022e^-4	0.752	UTR_5_PRIME CG1532 DOWNSTREAM CG1529	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna mE1_TFBS_HSA
X	8034308	X_8034308_SNP [dm3] X_8140275_SNP [dm6]	T	C	4.028e^-4	0.752	SYNONYMOUS_CODING Smox	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo
3L	17880192	3L_17880192_SNP [dm3] 3L_17887092_SNP [dm6]	C	A	4.032e^-4	0.752	UPSTREAM CG16775 & 1 other INTERGENIC

By genomic position
Variant impact
Gene name

Lifespan_25C phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results