DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=2.246e^-20)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_2L_t	<2e-16

Kruskal-Wallis test

Covariate	χ²	p-value
wolba	3.1396	0.0764
In_2L_t	43.5555	3.4837e-10
In_2R_NS	8.7177	0.0128

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

5282 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
X	12722153	X_12722153_SNP [dm3] X_12828120_SNP [dm6]	A	C	3.840e^-9	0.007	INTRON Pde9
X	12722117	X_12722117_SNP [dm3] X_12828084_SNP [dm6]	A	G	9.343e^-9	0.009	INTRON Pde9
3R	27081378	3R_27081378_SNP [dm3] 3R_31255656_SNP [dm6]	C	A	1.693e^-8	0.011	SYNONYMOUS_CODING spn-F UPSTREAM CG1750	TF binding site BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	10420231	2L_10420231_SNP [dm3] 2L_10420231_SNP [dm6]	A	C	3.352e^-8	0.016	DOWNSTREAM pie INTRON RfC3	TF binding site mE1_TFBS_ttk
2L	8892181	2L_8892181_SNP [dm3] 2L_8892181_SNP [dm6]	C	T	8.386e^-8	0.021	DOWNSTREAM CG42713 INTERGENIC
2L	4657401	2L_4657401_SNP [dm3] 2L_4657401_SNP [dm6]	A	G	9.638e^-8	0.021	INTERGENIC
2R	16489867	2R_16489867_SNP [dm3] 2R_20602362_SNP [dm6]	A	C	1.078e^-7	0.021	UPSTREAM bl INTRON bl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
X	12722141	X_12722141_SNP [dm3] X_12828108_SNP [dm6]	C	T	1.150e^-7	0.021	INTRON Pde9
3R	5749736	3R_5749736_SNP [dm3] 3R_9924014_SNP [dm6]	G	T	1.171e^-7	0.021	INTRON Glut4EF
2L	13020068	2L_13020068_DEL [dm3] 2L_13020068_DEL [dm6]	AAA	A	1.322e^-7	0.021	UPSTREAM CG9934 INTRON A16	TF binding site mE1_TFBS_cad
3L	10091812	3L_10091812_SNP [dm3] 3L_10098712_SNP [dm6]	G	C	1.454e^-7	0.021	UPSTREAM CG42825 DOWNSTREAM CG42826 INTRON dpr6
X	15579895	X_15579895_SNP [dm3] X_15685862_SNP [dm6]	A	T	1.603e^-7	0.021	NON_SYNONYMOUS_CODING CG15599	TF binding site BDTNP1_TFBS_prd mE1_TFBS_sens
3R	5749737	3R_5749737_SNP [dm3] 3R_9924015_SNP [dm6]	T	A	1.614e^-7	0.021	INTRON Glut4EF
X	16707826	X_16707826_SNP [dm3] X_16813793_SNP [dm6]	T	C	1.657e^-7	0.021	INTRON CG4829
X	9083143	X_9083143_SNP [dm3] X_9189110_SNP [dm6]	G	A	1.747e^-7	0.021	UTR_3_PRIME mei-P26 DOWNSTREAM CG12115
2L	8895468	2L_8895468_SNP [dm3] 2L_8895468_SNP [dm6]	A	T	1.795e^-7	0.021	INTERGENIC
3L	18460309	3L_18460309_SNP [dm3] 3L_18467209_SNP [dm6]	A	G	1.950e^-7	0.022	INTERGENIC
2L	10693487	2L_10693487_SNP [dm3] 2L_10693487_SNP [dm6]	T	C	2.176e^-7	0.022	NON_SYNONYMOUS_CODING CG17108	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3R	14591678	3R_14591678_SNP [dm3] 3R_18765956_SNP [dm6]	G	C	2.182e^-7	0.022	INTRON CG7720
2L	8891353	2L_8891353_SNP [dm3] 2L_8891353_SNP [dm6]	T	G	2.365e^-7	0.022	UPSTREAM CG42713 INTERGENIC
3R	5919522	3R_5919522_SNP [dm3] 3R_10093800_SNP [dm6]	T	C	2.906e^-7	0.025	EXON CR43459	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	18730258	3L_18730258_SNP [dm3] 3L_18737158_SNP [dm6]	G	A	2.933e^-7	0.025	INTERGENIC
3R	14591888	3R_14591888_SNP [dm3] 3R_18766166_SNP [dm6]	C	T	3.162e^-7	0.026	INTRON CG7720
3L	3848033	3L_3848033_SNP [dm3] 3L_3848033_SNP [dm6]	C	T	3.370e^-7	0.026	INTRON Awh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
3L	18460323	3L_18460323_SNP [dm3] 3L_18467223_SNP [dm6]	T	C	3.660e^-7	0.027	INTERGENIC
2L	17868806	2L_17868806_SNP [dm3] 2L_17868806_SNP [dm6]	T	A	3.692e^-7	0.027	INTRON CadN2
3L	13072190	3L_13072190_SNP [dm3] 3L_13079090_SNP [dm6]	A	T	3.989e^-7	0.027	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
X	12239910	X_12239910_SNP [dm3] X_12345877_SNP [dm6]	C	T	4.334e^-7	0.027	INTERGENIC
2L	18669276	2L_18669276_SNP [dm3] 2L_18669276_SNP [dm6]	T	A	4.460e^-7	0.027	SYNONYMOUS_CODING CG43338	TF binding site mE1_TFBS_cad
3L	2570088	3L_2570088_SNP [dm3] 3L_2570088_SNP [dm6]	C	T	4.465e^-7	0.027	INTRON msn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	18453521	3L_18453521_SNP [dm3] 3L_18460421_SNP [dm6]	A	T	4.544e^-7	0.027	INTRON CG32196	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	17868789	2L_17868789_SNP [dm3] 2L_17868789_SNP [dm6]	C	T	4.763e^-7	0.027	INTRON CadN2
2L	5158162	2L_5158162_SNP [dm3] 2L_5158162_SNP [dm6]	T	A	4.906e^-7	0.027	UTR_3_PRIME Msp300 INTRON Msp300
2L	5188939	2L_5188939_SNP [dm3] 2L_5188939_SNP [dm6]	G	A	4.929e^-7	0.027	NON_SYNONYMOUS_CODING Msp300	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8893211	2L_8893211_SNP [dm3] 2L_8893211_SNP [dm6]	G	A	5.037e^-7	0.027	INTERGENIC
2L	17878801	2L_17878801_SNP [dm3] 2L_17878801_SNP [dm6]	A	G	5.178e^-7	0.027	INTERGENIC
X	12722144	X_12722144_SNP [dm3] X_12828111_SNP [dm6]	C	G	5.383e^-7	0.027	INTRON Pde9
2L	15304111	2L_15304111_SNP [dm3] 2L_15304111_SNP [dm6]	A	T	5.618e^-7	0.027	INTERGENIC
X	9410112	X_9410112_INS [dm3] X_9516079_INS [dm6]	A	AC	5.710e^-7	0.027	INTRON CG32700
X	15479915	X_15479915_SNP [dm3] X_15585882_SNP [dm6]	C	T	5.909e^-7	0.028	UTR_3_PRIME CG9220 DOWNSTREAM CG8097	TF binding site mE1_TFBS_cad
X	11237150	X_11237150_INS [dm3] X_11343117_INS [dm6]	T	TT	6.039e^-7	0.028	INTRON CG34348
3L	18460729	3L_18460729_SNP [dm3] 3L_18467629_SNP [dm6]	C	A	7.115e^-7	0.031	INTERGENIC
2L	14326965	2L_14326965_SNP [dm3] 2L_14326965_SNP [dm6]	C	T	7.154e^-7	0.031	SYNONYMOUS_CODING wb DOWNSTREAM wb
2L	5076791	2L_5076791_DEL [dm3] 2L_5076791_DEL [dm6]	GGTG	G	7.256e^-7	0.031	INTRON pgant5
3R	5424509	3R_5424509_SNP [dm3] 3R_9598787_SNP [dm6]	T	A	7.449e^-7	0.031	INTRON CG8312	TF binding site BDTNP1_TFBS_hb
X	7037223	X_7037223_SNP [dm3] X_7143190_SNP [dm6]	G	C	7.871e^-7	0.032	INTRON CG9650
X	12722960	X_12722960_SNP [dm3] X_12828927_SNP [dm6]	G	T	8.035e^-7	0.032	INTRON Pde9
3L	18730260	3L_18730260_SNP [dm3] 3L_18737160_SNP [dm6]	G	A	8.167e^-7	0.032	INTERGENIC
X	5502595	X_5502595_SNP [dm3] X_5608562_SNP [dm6]	C	A	8.671e^-7	0.032	INTRON Vsx1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	12827807	2L_12827807_SNP [dm3] 2L_12827807_SNP [dm6]	C	G	8.883e^-7	0.032	INTERGENIC
3L	18730262	3L_18730262_SNP [dm3] 3L_18737162_SNP [dm6]	C	T	8.887e^-7	0.032	INTERGENIC
2L	15319276	2L_15319276_SNP [dm3] 2L_15319276_SNP [dm6]	G	A	9.067e^-7	0.032	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5074881	2L_5074881_SNP [dm3] 2L_5074881_SNP [dm6]	A	G	9.176e^-7	0.032	INTRON pgant5
2L	8889085	2L_8889085_SNP [dm3] 2L_8889085_SNP [dm6]	C	T	9.561e^-7	0.033	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_GATAe mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_kn mE1_TFBS_ttk
2L	15319467	2L_15319467_SNP [dm3] 2L_15319467_SNP [dm6]	A	G	9.668e^-7	0.033	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10148017	X_10148017_SNP [dm3] X_10253984_SNP [dm6]	G	C	1.042e^-6	0.034	INTRON Hk
X	10667985	X_10667985_SNP [dm3] X_10773952_SNP [dm6]	C	T	1.047e^-6	0.034	INTRON CG15211
3R	15515037	3R_15515037_SNP [dm3] 3R_19689315_SNP [dm6]	G	A	1.151e^-6	0.037	INTRON Naam
3L	18459325	3L_18459325_SNP [dm3] 3L_18466225_SNP [dm6]	G	A	1.159e^-6	0.037	INTERGENIC
2R	19138692	2R_19138692_SNP [dm3] 2R_23251169_SNP [dm6]	C	A	1.193e^-6	0.037	INTERGENIC
2L	17867777	2L_17867777_SNP [dm3] 2L_17867777_SNP [dm6]	C	A	1.290e^-6	0.04	INTRON CadN2
3L	18444671	3L_18444671_SNP [dm3] 3L_18451571_SNP [dm6]	T	C	1.335e^-6	0.04	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	18672643	2L_18672643_SNP [dm3] 2L_18672643_SNP [dm6]	T	A	1.367e^-6	0.041	NON_SYNONYMOUS_CODING CG43339 DOWNSTREAM Mst36Fb
2L	12177229	2L_12177229_SNP [dm3] 2L_12177229_SNP [dm6]	G	T	1.538e^-6	0.044	INTRON aret & 1 other	TF binding site BDTNP1_TFBS_z
2L	12177261	2L_12177261_DEL [dm3] 2L_12177261_DEL [dm6]	TAT	T	1.540e^-6	0.044	INTRON aret & 1 other	TF binding site BDTNP1_TFBS_z
2L	4657379	2L_4657379_SNP [dm3] 2L_4657379_SNP [dm6]	A	G	1.610e^-6	0.046	INTERGENIC
2L	5193348	2L_5193348_SNP [dm3] 2L_5193348_SNP [dm6]	A	T	1.705e^-6	0.047	SYNONYMOUS_CODING Msp300 UPSTREAM snmRNA:765	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	8890520	2L_8890520_SNP [dm3] 2L_8890520_SNP [dm6]	T	A	1.711e^-6	0.047	UPSTREAM CG42713 INTERGENIC
2L	17879005	2L_17879005_SNP [dm3] 2L_17879005_SNP [dm6]	C	T	1.768e^-6	0.047	INTERGENIC
2L	15319282	2L_15319282_SNP [dm3] 2L_15319282_SNP [dm6]	A	G	1.771e^-6	0.047	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	17868621	2L_17868621_SNP [dm3] 2L_17868621_SNP [dm6]	C	A	1.797e^-6	0.047	INTRON CadN2
2L	18676857	2L_18676857_SNP [dm3] 2L_18676857_SNP [dm6]	A	G	1.868e^-6	0.048	NON_SYNONYMOUS_CODING Mst36Fa UPSTREAM CG31751	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	14542303	2L_14542303_SNP [dm3] 2L_14542303_SNP [dm6]	A	G	1.907e^-6	0.048	INTERGENIC
2L	5079419	2L_5079419_SNP [dm3] 2L_5079419_SNP [dm6]	C	T	1.915e^-6	0.048	UTR_5_PRIME pgant5	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	9959436	X_9959436_SNP [dm3] X_10065403_SNP [dm6]	A	G	1.968e^-6	0.048	INTRON CG15312
3L	8609287	3L_8609287_SNP [dm3] 3L_8616187_SNP [dm6]	G	A	1.978e^-6	0.048	UTR_3_PRIME CG6282
3L	3492624	3L_3492624_SNP [dm3] 3L_3492624_SNP [dm6]	C	A	1.991e^-6	0.048	INTRON CG42324
2L	14544975	2L_14544975_SNP [dm3] 2L_14544975_SNP [dm6]	C	G	2.023e^-6	0.049	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3R	5427721	3R_5427721_SNP [dm3] 3R_9601999_SNP [dm6]	C	G	2.162e^-6	0.051	INTRON CG8312
3R	5427722	3R_5427722_SNP [dm3] 3R_9602000_SNP [dm6]	C	A	2.162e^-6	0.051	INTRON CG8312
2L	17868790	2L_17868790_SNP [dm3] 2L_17868790_SNP [dm6]	G	T	2.319e^-6	0.053	INTRON CadN2
3L	18444670	3L_18444670_SNP [dm3] 3L_18451570_SNP [dm6]	G	A	2.338e^-6	0.053	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	3498858	3R_3498858_SNP [dm3] 3R_7673136_SNP [dm6]	C	G	2.342e^-6	0.053	INTRON Nlg1
2L	15316932	2L_15316932_SNP [dm3] 2L_15316932_SNP [dm6]	G	C	2.383e^-6	0.053	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	2640597	2L_2640597_SNP [dm3] 2L_2640597_SNP [dm6]	T	G	2.399e^-6	0.053	INTERGENIC
X	13341541	X_13341541_SNP [dm3] X_13447508_SNP [dm6]	C	T	2.436e^-6	0.053	INTRON Neto
2L	17868295	2L_17868295_SNP [dm3] 2L_17868295_SNP [dm6]	G	T	2.458e^-6	0.053	INTRON CadN2
X	19112790	X_19112790_SNP [dm3] X_19218757_SNP [dm6]	G	C	2.492e^-6	0.053	INTERGENIC
3L	10016616	3L_10016616_SNP [dm3] 3L_10023516_SNP [dm6]	A	G	2.500e^-6	0.053	INTRON dpr6
3L	1565132	3L_1565132_SNP [dm3] 3L_1565132_SNP [dm6]	C	T	2.577e^-6	0.053	UPSTREAM CG12003 INTRON CG7879	TF binding site mE1_TFBS_sens
X	12332193	X_12332193_SNP [dm3] X_12438160_SNP [dm6]	C	A	2.592e^-6	0.053	INTRON Pkcdelta
3L	3871831	3L_3871831_SNP [dm3] 3L_3871831_SNP [dm6]	C	A	2.638e^-6	0.054	INTERGENIC
X	7035046	X_7035046_SNP [dm3] X_7141013_SNP [dm6]	T	A	2.704e^-6	0.055	INTRON CG9650
3L	4485062	3L_4485062_SNP [dm3] 3L_4485062_SNP [dm6]	A	G	2.778e^-6	0.055	DOWNSTREAM CG13722 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_ttk
2L	5071171	2L_5071171_SNP [dm3] 2L_5071171_SNP [dm6]	A	G	2.910e^-6	0.057	UPSTREAM CR45305 DOWNSTREAM qtc & 1 other INTRON RpL37A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
2L	17867776	2L_17867776_SNP [dm3] 2L_17867776_SNP [dm6]	C	G	2.957e^-6	0.058	INTRON CadN2
3R	6390924	3R_6390924_SNP [dm3] 3R_10565202_SNP [dm6]	A	G	3.124e^-6	0.059	INTRON hth
2L	15304090	2L_15304090_SNP [dm3] 2L_15304090_SNP [dm6]	G	A	3.133e^-6	0.059	INTERGENIC
2L	5139666	2L_5139666_SNP [dm3] 2L_5139666_SNP [dm6]	C	T	3.157e^-6	0.059	NON_SYNONYMOUS_CODING Msp300
2L	5076084	2L_5076084_SNP [dm3] 2L_5076084_SNP [dm6]	G	T	3.207e^-6	0.059	INTRON pgant5
X	11876380	X_11876380_SNP [dm3] X_11982347_SNP [dm6]	T	A	3.278e^-6	0.059	INTRON cac	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	19112795	X_19112795_SNP [dm3] X_19218762_SNP [dm6]	T	G	3.349e^-6	0.059	INTERGENIC
2L	14552042	2L_14552042_SNP [dm3] 2L_14552042_SNP [dm6]	A	T	3.362e^-6	0.059	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	14552047	2L_14552047_SNP [dm3] 2L_14552047_SNP [dm6]	C	G	3.362e^-6	0.059	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	17868257	2L_17868257_SNP [dm3] 2L_17868257_SNP [dm6]	T	G	3.401e^-6	0.059	INTRON CadN2
3R	1288929	3R_1288929_SNP [dm3] 3R_5463207_SNP [dm6]	A	C	3.423e^-6	0.059	UPSTREAM PEK INTRON PEK	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
X	10045050	X_10045050_SNP [dm3] X_10151017_SNP [dm6]	G	A	3.425e^-6	0.059	INTRON CR44894
2L	18676884	2L_18676884_SNP [dm3] 2L_18676884_SNP [dm6]	C	T	3.470e^-6	0.059	NON_SYNONYMOUS_CODING Mst36Fa UPSTREAM CG31751	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	8888053	2L_8888053_SNP [dm3] 2L_8888053_SNP [dm6]	T	A	3.504e^-6	0.059	UPSTREAM CR44415 INTERGENIC	TF binding site mE1_TFBS_cad
3L	12614517	3L_12614517_SNP [dm3] 3L_12621417_SNP [dm6]	G	A	3.507e^-6	0.059	UTR_3_PRIME caup
2L	17896790	2L_17896790_SNP [dm3] 2L_17896790_SNP [dm6]	A	T	3.524e^-6	0.059	INTERGENIC
2L	5069554	2L_5069554_SNP [dm3] 2L_5069554_SNP [dm6]	C	T	3.549e^-6	0.059	DOWNSTREAM mir-2495 & 1 other INTRON qtc
X	20480981	X_20480981_SNP [dm3] X_20609954_SNP [dm6]	C	T	3.599e^-6	0.059	INTRON RunxA
3L	18473922	3L_18473922_SNP [dm3] 3L_18480822_SNP [dm6]	A	T	3.601e^-6	0.059	INTERGENIC
2R	19138662	2R_19138662_SNP [dm3] 2R_23251139_SNP [dm6]	G	T	3.647e^-6	0.059	INTERGENIC
X	11243109	X_11243109_SNP [dm3] X_11349076_SNP [dm6]	A	C	3.666e^-6	0.059	UTR_5_PRIME CG1738 UPSTREAM CG11752 DOWNSTREAM CG11756	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	8463332	3L_8463332_SNP [dm3] 3L_8470232_SNP [dm6]	C	T	3.700e^-6	0.059	INTRON Gug
X	20481025	X_20481025_SNP [dm3] X_20609998_SNP [dm6]	G	A	3.736e^-6	0.059	INTRON RunxA
3R	17852686	3R_17852686_SNP [dm3] 3R_22026964_SNP [dm6]	A	G	3.822e^-6	0.06	NON_SYNONYMOUS_CODING Cchl UPSTREAM ND42	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8888771	2L_8888771_SNP [dm3] 2L_8888771_SNP [dm6]	T	A	3.855e^-6	0.06	UPSTREAM CR44415 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
X	20023391	X_20023391_SNP [dm3] X_20129358_SNP [dm6]	T	A	3.913e^-6	0.06	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	15319459	2L_15319459_SNP [dm3] 2L_15319459_SNP [dm6]	T	C	3.914e^-6	0.06	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16416053	X_16416053_SNP [dm3] X_16522020_SNP [dm6]	C	T	3.988e^-6	0.061	DOWNSTREAM Cnx14D INTRON para
2L	5071179	2L_5071179_SNP [dm3] 2L_5071179_SNP [dm6]	T	C	4.073e^-6	0.061	UPSTREAM CR45305 DOWNSTREAM qtc & 1 other INTRON RpL37A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
X	16416039	X_16416039_SNP [dm3] X_16522006_SNP [dm6]	T	C	4.074e^-6	0.061	DOWNSTREAM Cnx14D INTRON para
2L	15316937	2L_15316937_SNP [dm3] 2L_15316937_SNP [dm6]	G	A	4.116e^-6	0.061	INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	12614470	3L_12614470_SNP [dm3] 3L_12621370_SNP [dm6]	C	T	4.132e^-6	0.061	UTR_3_PRIME caup
2L	5076070	2L_5076070_SNP [dm3] 2L_5076070_SNP [dm6]	A	T	4.189e^-6	0.061	INTRON pgant5
3L	18453726	3L_18453726_SNP [dm3] 3L_18460626_SNP [dm6]	T	A	4.233e^-6	0.061	INTRON CG32196	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	18450365	3L_18450365_SNP [dm3] 3L_18457265_SNP [dm6]	C	T	4.256e^-6	0.061	UPSTREAM CR44670 EXON CR44671
3R	10044141	3R_10044141_SNP [dm3] 3R_14218419_SNP [dm6]	G	A	4.376e^-6	0.062	SYNONYMOUS_CODING CG31326 UPSTREAM CG9649
3L	2789351	3L_2789351_SNP [dm3] 3L_2789351_SNP [dm6]	G	A	4.390e^-6	0.062	SYNONYMOUS_CODING CG43444	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	18447380	3L_18447380_SNP [dm3] 3L_18454280_SNP [dm6]	T	C	4.442e^-6	0.062	INTERGENIC
3L	18447381	3L_18447381_SNP [dm3] 3L_18454281_SNP [dm6]	T	A	4.442e^-6	0.062	INTERGENIC
X	12753624	X_12753624_SNP [dm3] X_12859591_SNP [dm6]	G	A	4.443e^-6	0.062	INTRON Pde9
2L	4566244	2L_4566244_SNP [dm3] 2L_4566244_SNP [dm6]	A	T	4.579e^-6	0.063	INTRON dp
3L	18447383	3L_18447383_SNP [dm3] 3L_18454283_SNP [dm6]	T	A	4.601e^-6	0.063	INTERGENIC
2L	17867817	2L_17867817_SNP [dm3] 2L_17867817_SNP [dm6]	C	T	4.652e^-6	0.063	INTRON CadN2
2L	3937192	2L_3937192_SNP [dm3] 2L_3937192_SNP [dm6]	A	C	4.661e^-6	0.063	INTRON fred
3L	18650373	3L_18650373_SNP [dm3] 3L_18657273_SNP [dm6]	G	T	4.685e^-6	0.063	INTRON MYPT-75D
X	10401921	X_10401921_SNP [dm3] X_10507888_SNP [dm6]	T	C	4.783e^-6	0.063	INTRON spri
2L	17882803	2L_17882803_SNP [dm3] 2L_17882803_SNP [dm6]	A	C	4.847e^-6	0.063	INTERGENIC
2L	17873128	2L_17873128_SNP [dm3] 2L_17873128_SNP [dm6]	C	A	4.887e^-6	0.063	INTRON CadN2
2L	11025008	2L_11025008_DEL [dm3] 2L_11025008_DEL [dm6]	CTAATTCCGTTTTTCCCAAC...	C	4.902e^-6	0.063	INTRON Samuel
X	17166880	X_17166880_SNP [dm3] X_17272847_SNP [dm6]	T	A	4.926e^-6	0.063	INTRON f	TF binding site mE1_TFBS_cad
2L	3937240	2L_3937240_SNP [dm3] 2L_3937240_SNP [dm6]	C	G	4.936e^-6	0.063	INTRON fred
3R	5919720	3R_5919720_SNP [dm3] 3R_10093998_SNP [dm6]	A	T	4.984e^-6	0.063	EXON CR43459	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	5392329	3R_5392329_SNP [dm3] 3R_9566607_SNP [dm6]	C	T	5.004e^-6	0.063	SYNONYMOUS_CODING CG16789 DOWNSTREAM Vps45	TF binding site mE1_TFBS_cad
2L	5144810	2L_5144810_DEL [dm3] 2L_5144810_DEL [dm6]	GTGTATCTGGGAT...	G	5.224e^-6	0.065	INTRON Msp300	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	8829226	X_8829226_SNP [dm3] X_8935193_SNP [dm6]	T	C	5.240e^-6	0.065	INTRON rdgA
2R	2813553	2R_2813553_SNP [dm3] 2R_6926048_SNP [dm6]	A	C	5.260e^-6	0.065	UTR_3_PRIME mim	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	18447251	3L_18447251_SNP [dm3] 3L_18454151_SNP [dm6]	G	T	5.318e^-6	0.065	INTERGENIC
3L	18862716	3L_18862716_SNP [dm3] 3L_18869616_SNP [dm6]	C	A	5.319e^-6	0.065	SYNONYMOUS_CODING CG6852 UPSTREAM Blos3 DOWNSTREAM Dysb & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_ttk mE1_TFBS_Ubx
3R	810200	3R_810200_INS [dm3] 3R_4984478_INS [dm6]	A	ACA	5.380e^-6	0.065	UPSTREAM CG14662 DOWNSTREAM CR43424 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2L	5144828	2L_5144828_SNP [dm3] 2L_5144828_SNP [dm6]	A	G	5.387e^-6	0.065	INTRON Msp300	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	17869516	2L_17869516_SNP [dm3] 2L_17869516_SNP [dm6]	T	A	5.441e^-6	0.065	INTRON CadN2
2L	17868341	2L_17868341_SNP [dm3] 2L_17868341_SNP [dm6]	C	T	5.532e^-6	0.066	INTRON CadN2
X	11815569	X_11815569_INS [dm3] X_11921536_INS [dm6]	T	TAT	5.564e^-6	0.066	UPSTREAM CR32660 DOWNSTREAM Sclp INTRON Sclp
2L	5193516	2L_5193516_SNP [dm3] 2L_5193516_SNP [dm6]	T	A	5.660e^-6	0.067	NON_SYNONYMOUS_CODING Msp300 EXON snmRNA:765	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	19138613	2R_19138613_DEL [dm3] 2R_23251090_DEL [dm6]	ATAGAAAGGTAGCTCGTTTC...	A	5.857e^-6	0.068	INTERGENIC
X	16416030	X_16416030_INS [dm3] X_16521997_INS [dm6]	C	CAAAACTAA	5.903e^-6	0.068	DOWNSTREAM Cnx14D INTRON para
2L	5059841	2L_5059841_SNP [dm3] 2L_5059841_SNP [dm6]	T	C	5.972e^-6	0.068	UPSTREAM Rpn11 & 1 other DOWNSTREAM CR45291 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cnc mE1_TFBS_HSA
2L	10833262	2L_10833262_SNP [dm3] 2L_10833262_SNP [dm6]	A	C	5.998e^-6	0.068	INTRON Nos
2L	15319340	2L_15319340_SNP [dm3] 2L_15319340_SNP [dm6]	A	G	6.053e^-6	0.068	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	23011370	3L_23011370_SNP [dm3] 3L_23018270_SNP [dm6]	T	G	6.078e^-6	0.068	INTRON nrm	transposable element FlyBase
2L	5059830	2L_5059830_SNP [dm3] 2L_5059830_SNP [dm6]	G	A	6.092e^-6	0.068	UPSTREAM Rpn11 & 1 other DOWNSTREAM CR45291 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cnc mE1_TFBS_HSA
X	20462923	X_20462923_SNP [dm3] X_20591896_SNP [dm6]	A	G	6.171e^-6	0.068	UTR_3_PRIME RunxA	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	26373786	3R_26373786_SNP [dm3] 3R_30548064_SNP [dm6]	A	G	6.188e^-6	0.068	INTRON tmod
2L	1719525	2L_1719525_SNP [dm3] 2L_1719525_SNP [dm6]	G	A	6.195e^-6	0.068	INTRON Rim2
3R	15463380	3R_15463380_SNP [dm3] 3R_19637658_SNP [dm6]	G	C	6.283e^-6	0.068	INTRON subdued
3R	14728302	3R_14728302_SNP [dm3] 3R_18902580_SNP [dm6]	A	T	6.341e^-6	0.068	SYNONYMOUS_CODING CG34284 UPSTREAM CG14294
3L	18859273	3L_18859273_SNP [dm3] 3L_18866173_SNP [dm6]	C	A	6.373e^-6	0.068	UPSTREAM CG14074 DOWNSTREAM CG6865 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_Ubx
3L	18213459	3L_18213459_DEL [dm3] 3L_18220359_DEL [dm6]	GAACCA	G	6.423e^-6	0.068	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_zfh1
3L	18213468	3L_18213468_SNP [dm3] 3L_18220368_SNP [dm6]	A	G	6.423e^-6	0.068	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_zfh1
3L	18213472	3L_18213472_SNP [dm3] 3L_18220372_SNP [dm6]	T	A	6.423e^-6	0.068	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_zfh1
2R	16491199	2R_16491199_SNP [dm3] 2R_20603694_SNP [dm6]	C	T	6.423e^-6	0.068	INTRON bl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	24105628	3R_24105628_SNP [dm3] 3R_28279906_SNP [dm6]	C	T	6.459e^-6	0.068	INTERGENIC
2L	3937190	2L_3937190_SNP [dm3] 2L_3937190_SNP [dm6]	A	T	6.563e^-6	0.069	INTRON fred
X	5364846	X_5364846_SNP [dm3] X_5470813_SNP [dm6]	T	C	6.595e^-6	0.069	INTRON SPR
3L	18728216	3L_18728216_SNP [dm3] 3L_18735116_SNP [dm6]	C	G	6.716e^-6	0.07	INTERGENIC
2L	672959	2L_672959_SNP [dm3] 2L_672959_SNP [dm6]	A	G	6.794e^-6	0.07	INTRON ds
3R	25882076	3R_25882076_SNP [dm3] 3R_30056354_SNP [dm6]	G	T	6.943e^-6	0.072	NON_SYNONYMOUS_CODING CG15526 UPSTREAM CG7950 & 2 others	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	18472271	3L_18472271_DEL [dm3] 3L_18479171_DEL [dm6]	TT	T	7.063e^-6	0.072	EXON CR44673
2L	8889402	2L_8889402_SNP [dm3] 2L_8889402_SNP [dm6]	C	T	7.096e^-6	0.072	INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens
3R	16044509	3R_16044509_SNP [dm3] 3R_20218787_SNP [dm6]	G	A	7.122e^-6	0.072	INTRON Nlg4
X	10078207	X_10078207_SNP [dm3] X_10184174_SNP [dm6]	G	A	7.161e^-6	0.072	INTRON CG43902 & 1 other
X	9185474	X_9185474_SNP [dm3] X_9291441_SNP [dm6]	T	A	7.171e^-6	0.072	INTRON lz
2L	5118987	2L_5118987_SNP [dm3] 2L_5118987_SNP [dm6]	A	T	7.246e^-6	0.072	INTRON Msp300
2L	12351719	2L_12351719_SNP [dm3] 2L_12351719_SNP [dm6]	C	A	7.470e^-6	0.073	UTR_5_PRIME bru-2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna
2L	15319396	2L_15319396_SNP [dm3] 2L_15319396_SNP [dm6]	G	T	7.485e^-6	0.073	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	18747898	3L_18747898_SNP [dm3] 3L_18754798_SNP [dm6]	T	C	7.534e^-6	0.073	INTRON ftz-f1
X	19310309	X_19310309_SNP [dm3] X_19416276_SNP [dm6]	T	A	7.549e^-6	0.073	INTRON kek5
2L	5076755	2L_5076755_SNP [dm3] 2L_5076755_SNP [dm6]	G	A	7.559e^-6	0.073	INTRON pgant5
2L	15319295	2L_15319295_SNP [dm3] 2L_15319295_SNP [dm6]	T	C	7.606e^-6	0.073	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	1270986	3R_1270986_SNP [dm3] 3R_5445264_SNP [dm6]	G	A	7.629e^-6	0.073	INTRON CG14669
3R	2199069	3R_2199069_SNP [dm3] 3R_6373347_SNP [dm6]	T	G	7.651e^-6	0.073	NON_SYNONYMOUS_CODING CG1041	TF binding site mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	4655226	2L_4655226_SNP [dm3] 2L_4655226_SNP [dm6]	C	G	7.652e^-6	0.073	INTERGENIC
2L	4502501	2L_4502501_SNP [dm3] 2L_4502501_SNP [dm6]	G	T	7.720e^-6	0.073	INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	9824569	3L_9824569_SNP [dm3] 3L_9831469_SNP [dm6]	T	C	7.804e^-6	0.073	INTRON CG43897	TF binding site mE1_TFBS_cad
2L	15337740	2L_15337740_SNP [dm3] 2L_15337740_SNP [dm6]	C	T	7.810e^-6	0.073	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	2046684	3L_2046684_SNP [dm3] 3L_2046684_SNP [dm6]	A	T	7.935e^-6	0.074	INTRON sls
X	4160349	X_4160349_SNP [dm3] X_4266316_SNP [dm6]	C	T	8.065e^-6	0.075	SYNONYMOUS_CODING CG12691
2L	12416874	2L_12416874_SNP [dm3] 2L_12416874_SNP [dm6]	C	G	8.243e^-6	0.076	INTRON vir-1
2R	18436654	2R_18436654_SNP [dm3] 2R_22549149_SNP [dm6]	C	A	8.385e^-6	0.077	UPSTREAM CG6018 INTRON px
3L	18447385	3L_18447385_SNP [dm3] 3L_18454285_SNP [dm6]	G	T	8.405e^-6	0.077	INTERGENIC
3L	708649	3L_708649_SNP [dm3] 3L_708649_SNP [dm6]	G	T	8.457e^-6	0.077	UTR_3_PRIME CkIIalpha-i3 UPSTREAM CG13895 DOWNSTREAM CkIIalpha-i3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_ttk
3R	6565042	3R_6565042_SNP [dm3] 3R_10739320_SNP [dm6]	T	C	8.491e^-6	0.077	INTRON TkR86C	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad
2L	5190228	2L_5190228_SNP [dm3] 2L_5190228_SNP [dm6]	G	T	8.578e^-6	0.077	SYNONYMOUS_CODING Msp300	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	9410128	X_9410128_SNP [dm3] X_9516095_SNP [dm6]	T	C	8.755e^-6	0.079	INTRON CG32700
X	16040191	X_16040191_SNP [dm3] X_16146158_SNP [dm6]	C	T	8.797e^-6	0.079	INTRON disco-r	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	810190	3R_810190_INS [dm3] 3R_4984468_INS [dm6]	T	TG	8.882e^-6	0.079	UPSTREAM CG14662 DOWNSTREAM CR43424 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2L	18668432	2L_18668432_SNP [dm3] 2L_18668432_SNP [dm6]	A	G	8.999e^-6	0.08	SYNONYMOUS_CODING CG43338	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	4492159	2R_4492159_SNP [dm3] 2R_8604654_SNP [dm6]	G	A	9.090e^-6	0.08	INTRON rgr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	9410125	X_9410125_SNP [dm3] X_9516092_SNP [dm6]	C	T	9.153e^-6	0.08	INTRON CG32700
3R	15194508	3R_15194508_SNP [dm3] 3R_19368786_SNP [dm6]	T	A	9.177e^-6	0.08	DOWNSTREAM Ino80 INTERGENIC
2L	12815034	2L_12815034_SNP [dm3] 2L_12815034_SNP [dm6]	C	T	9.234e^-6	0.08	INTERGENIC
2L	5971092	2L_5971092_SNP [dm3] 2L_5971092_SNP [dm6]	C	T	9.243e^-6	0.08	UPSTREAM CR43465 DOWNSTREAM Ucp4B INTERGENIC	TF binding site mE1_TFBS_cad
2L	8891550	2L_8891550_SNP [dm3] 2L_8891550_SNP [dm6]	C	T	9.451e^-6	0.081	NON_SYNONYMOUS_CODING CG42713
X	1870969	X_1870969_SNP [dm3] X_1976936_SNP [dm6]	A	T	9.487e^-6	0.081	INTRON Hr4	TF binding site BDTNP1_TFBS_dl
3R	5410565	3R_5410565_SNP [dm3] 3R_9584843_SNP [dm6]	G	T	9.723e^-6	0.083	INTRON CG8301	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	18444611	3L_18444611_SNP [dm3] 3L_18451511_SNP [dm6]	C	A	9.837e^-6	0.083	INTERGENIC	insulator Insulator_Class_II.mE01 TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3L	9242875	3L_9242875_SNP [dm3] 3L_9249775_SNP [dm6]	G	A	9.842e^-6	0.083	UPSTREAM CG4477 INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	20481437	X_20481437_SNP [dm3] X_20610410_SNP [dm6]	G	A	9.904e^-6	0.083	INTRON RunxA
X	6691285	X_6691285_SNP [dm3] X_6797252_SNP [dm6]	C	A	1.011e^-5	0.084	INTRON C3G
2L	16545876	2L_16545876_SNP [dm3] 2L_16545876_SNP [dm6]	C	T	1.013e^-5	0.084	INTRON CG42389	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_Trl
2L	3937233	2L_3937233_SNP [dm3] 2L_3937233_SNP [dm6]	A	G	1.024e^-5	0.084	INTRON fred
2L	4832718	2L_4832718_SNP [dm3] 2L_4832718_SNP [dm6]	C	A	1.026e^-5	0.084	INTRON Ir25a
2L	15319359	2L_15319359_SNP [dm3] 2L_15319359_SNP [dm6]	A	T	1.029e^-5	0.084	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	18857191	3L_18857191_DEL [dm3] 3L_18864091_DEL [dm6]	TC	T	1.040e^-5	0.084	UPSTREAM CG6865 INTRON CG6865
2L	5284680	2L_5284680_SNP [dm3] 2L_5284680_SNP [dm6]	T	C	1.042e^-5	0.084	INTERGENIC
2L	15319463	2L_15319463_SNP [dm3] 2L_15319463_SNP [dm6]	C	A	1.049e^-5	0.084	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12845317	2L_12845317_SNP [dm3] 2L_12845317_SNP [dm6]	T	C	1.052e^-5	0.084	INTERGENIC
3L	18443911	3L_18443911_SNP [dm3] 3L_18450811_SNP [dm6]	C	A	1.052e^-5	0.084	INTERGENIC
X	9415210	X_9415210_SNP [dm3] X_9521177_SNP [dm6]	G	A	1.074e^-5	0.084	INTRON CG32700
X	16416025	X_16416025_INS [dm3] X_16521992_INS [dm6]	A	ACGCACAT	1.077e^-5	0.084	DOWNSTREAM Cnx14D INTRON para
2L	12824513	2L_12824513_SNP [dm3] 2L_12824513_SNP [dm6]	C	A	1.084e^-5	0.084	INTERGENIC
2L	12416891	2L_12416891_SNP [dm3] 2L_12416891_SNP [dm6]	T	C	1.085e^-5	0.084	INTRON vir-1
3R	13723550	3R_13723550_INS [dm3] 3R_17897828_INS [dm6]	G	GGA	1.089e^-5	0.084	INTRON Rim
2L	11591403	2L_11591403_SNP [dm3] 2L_11591403_SNP [dm6]	T	C	1.098e^-5	0.084	UTR_3_PRIME Acp33A INTRON kek2
3L	8608451	3L_8608451_SNP [dm3] 3L_8615351_SNP [dm6]	A	G	1.098e^-5	0.084	SYNONYMOUS_CODING CG6282
X	10958565	X_10958565_SNP [dm3] X_11064532_SNP [dm6]	A	C	1.102e^-5	0.084	INTERGENIC
X	17397279	X_17397279_SNP [dm3] X_17503246_SNP [dm6]	T	C	1.104e^-5	0.084	INTRON CG43658	TF binding site BDTNP1_TFBS_twi
3L	3142279	3L_3142279_SNP [dm3] 3L_3142279_SNP [dm6]	T	C	1.107e^-5	0.084	INTRON CG11537	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	18670863	2L_18670863_SNP [dm3] 2L_18670863_SNP [dm6]	C	T	1.111e^-5	0.084	UPSTREAM CG43338 DOWNSTREAM CG43339 INTRON CG43338
3L	7109887	3L_7109887_SNP [dm3] 3L_7116787_SNP [dm6]	T	C	1.112e^-5	0.084	INTRON form3
3R	10341249	3R_10341249_SNP [dm3] 3R_14515527_SNP [dm6]	C	G	1.116e^-5	0.084	UTR_3_PRIME Pde6
2L	4488512	2L_4488512_SNP [dm3] 2L_4488512_SNP [dm6]	A	G	1.118e^-5	0.084	SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	5363515	3R_5363515_SNP [dm3] 3R_9537793_SNP [dm6]	T	G	1.122e^-5	0.084	UTR_3_PRIME mura DOWNSTREAM mura
2R	19138587	2R_19138587_SNP [dm3] 2R_23251064_SNP [dm6]	C	A	1.122e^-5	0.084	INTERGENIC
3R	15298482	3R_15298482_SNP [dm3] 3R_19472760_SNP [dm6]	C	A	1.128e^-5	0.084	INTRON Dys	TF binding site mE1_TFBS_cad
X	3442112	X_3442112_SNP [dm3] X_3548079_SNP [dm6]	C	G	1.134e^-5	0.084	INTRON CG32791
2R	17749567	2R_17749567_SNP [dm3] 2R_21862062_SNP [dm6]	T	C	1.138e^-5	0.084	DOWNSTREAM CG9294 INTERGENIC
3R	1805665	3R_1805665_SNP [dm3] 3R_5979943_SNP [dm6]	G	A	1.145e^-5	0.084	INTERGENIC	TF binding site mE1_TFBS_chinmo
X	3442090	X_3442090_SNP [dm3] X_3548057_SNP [dm6]	C	A	1.147e^-5	0.084	INTRON CG32791
2L	16544874	2L_16544874_SNP [dm3] 2L_16544874_SNP [dm6]	A	C	1.149e^-5	0.084	UPSTREAM CG42389 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2R	19138664	2R_19138664_SNP [dm3] 2R_23251141_SNP [dm6]	A	G	1.155e^-5	0.085	INTERGENIC
3L	2603439	3L_2603439_SNP [dm3] 3L_2603439_SNP [dm6]	G	A	1.174e^-5	0.085	SYNONYMOUS_CODING Pxn	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	5139613	2L_5139613_SNP [dm3] 2L_5139613_SNP [dm6]	C	T	1.175e^-5	0.085	SYNONYMOUS_CODING Msp300
3L	1719544	3L_1719544_SNP [dm3] 3L_1719544_SNP [dm6]	C	A	1.191e^-5	0.086	SYNONYMOUS_CODING drpr INTRON drpr	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	18676796	2L_18676796_SNP [dm3] 2L_18676796_SNP [dm6]	A	T	1.200e^-5	0.086	NON_SYNONYMOUS_CODING Mst36Fa UPSTREAM CG31751	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	14454017	2L_14454017_SNP [dm3] 2L_14454017_SNP [dm6]	G	T	1.200e^-5	0.086	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	11328667	X_11328667_SNP [dm3] X_11434634_SNP [dm6]	A	T	1.203e^-5	0.086	UTR_3_PRIME Evi5 DOWNSTREAM Evi5 INTRON Evi5
2L	17872634	2L_17872634_SNP [dm3] 2L_17872634_SNP [dm6]	A	G	1.211e^-5	0.086	INTRON CadN2
X	13092885	X_13092885_SNP [dm3] X_13198852_SNP [dm6]	G	A	1.225e^-5	0.087	SYNONYMOUS_CODING sno
X	16415858	X_16415858_SNP [dm3] X_16521825_SNP [dm6]	G	C	1.230e^-5	0.087	INTRON para
2R	18438479	2R_18438479_SNP [dm3] 2R_22550974_SNP [dm6]	C	T	1.259e^-5	0.089	SYNONYMOUS_CODING CG6018 INTRON px	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	3933967	3L_3933967_SNP [dm3] 3L_3933967_SNP [dm6]	A	C	1.291e^-5	0.09	UPSTREAM Eip63F-1 & 1 other INTRON Eip63F-1
3R	5940822	3R_5940822_SNP [dm3] 3R_10115100_SNP [dm6]	A	G	1.292e^-5	0.09	INTRON CG3940
2L	4832722	2L_4832722_SNP [dm3] 2L_4832722_SNP [dm6]	A	G	1.293e^-5	0.09	INTRON Ir25a
3R	6052903	3R_6052903_SNP [dm3] 3R_10227181_SNP [dm6]	A	G	1.311e^-5	0.091	INTRON CG42795	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
X	13019266	X_13019266_SNP [dm3] X_13125233_SNP [dm6]	T	C	1.315e^-5	0.091	INTRON CG32638
2L	5084918	2L_5084918_SNP [dm3] 2L_5084918_SNP [dm6]	G	A	1.319e^-5	0.091	INTRON pgant5	TF binding site mE1_TFBS_cad
3R	513407	3R_513407_SNP [dm3] 3R_4687685_SNP [dm6]	T	C	1.323e^-5	0.091	INTRON CG43427
2L	6124789	2L_6124789_SNP [dm3] 2L_6124789_SNP [dm6]	C	T	1.335e^-5	0.091	UPSTREAM Arpc4 DOWNSTREAM stai INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Kr
2L	1655732	2L_1655732_SNP [dm3] 2L_1655732_SNP [dm6]	C	A	1.346e^-5	0.091	INTRON chinmo	TF binding site BDTNP1_TFBS_dl
3R	23992187	3R_23992187_SNP [dm3] 3R_28166465_SNP [dm6]	A	G	1.349e^-5	0.091	INTRON CG34354
3L	18862554	3L_18862554_SNP [dm3] 3L_18869454_SNP [dm6]	C	T	1.359e^-5	0.091	UTR_5_PRIME CG6852 UPSTREAM Blos3 DOWNSTREAM Dysb & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_ttk mE1_TFBS_Ubx
2L	18677081	2L_18677081_SNP [dm3] 2L_18677081_SNP [dm6]	G	C	1.362e^-5	0.091	UPSTREAM CG31751 & 1 other INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Ubx
3R	4568243	3R_4568243_SNP [dm3] 3R_8742521_SNP [dm6]	C	A	1.372e^-5	0.091	INTRON CG9801
X	12611563	X_12611563_SNP [dm3] X_12717530_SNP [dm6]	T	C	1.375e^-5	0.091	DOWNSTREAM CR43963 INTRON Smr	TF binding site BDTNP1_TFBS_dl
3L	18447280	3L_18447280_SNP [dm3] 3L_18454180_SNP [dm6]	T	C	1.380e^-5	0.091	INTERGENIC
3R	13553104	3R_13553104_SNP [dm3] 3R_17727382_SNP [dm6]	A	G	1.385e^-5	0.091	INTRON Lgr1
3L	18447243	3L_18447243_SNP [dm3] 3L_18454143_SNP [dm6]	T	A	1.386e^-5	0.091	INTERGENIC
2L	5139787	2L_5139787_SNP [dm3] 2L_5139787_SNP [dm6]	C	T	1.388e^-5	0.091	SYNONYMOUS_CODING Msp300
2L	11373762	2L_11373762_SNP [dm3] 2L_11373762_SNP [dm6]	A	C	1.389e^-5	0.091	DOWNSTREAM salr INTERGENIC
3L	21204151	3L_21204151_SNP [dm3] 3L_21211051_SNP [dm6]	G	C	1.402e^-5	0.092	UPSTREAM CG10510 INTRON CG10508
2L	12490046	2L_12490046_SNP [dm3] 2L_12490046_SNP [dm6]	A	G	1.413e^-5	0.092	INTRON bun
3R	14361722	3R_14361722_SNP [dm3] 3R_18536000_SNP [dm6]	T	G	1.414e^-5	0.092	INTRON fru
2L	12824096	2L_12824096_SNP [dm3] 2L_12824096_SNP [dm6]	A	G	1.425e^-5	0.092	INTERGENIC
3L	18871272	3L_18871272_SNP [dm3] 3L_18878172_SNP [dm6]	G	T	1.447e^-5	0.093	UTR_3_PRIME Ugt DOWNSTREAM CG3961
2R	16293310	2R_16293310_SNP [dm3] 2R_20405805_SNP [dm6]	C	T	1.453e^-5	0.093	INTERGENIC
X	20023978	X_20023978_SNP [dm3] X_20129945_SNP [dm6]	G	T	1.454e^-5	0.093	DOWNSTREAM CG42582 INTERGENIC	TF binding site mE1_TFBS_inv
X	16415876	X_16415876_SNP [dm3] X_16521843_SNP [dm6]	C	T	1.471e^-5	0.094	INTRON para
3L	12651173	3L_12651173_SNP [dm3] 3L_12658073_SNP [dm6]	G	A	1.476e^-5	0.094	UPSTREAM CR44553 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
3L	18858509	3L_18858509_SNP [dm3] 3L_18865409_SNP [dm6]	C	G	1.478e^-5	0.094	NON_SYNONYMOUS_CODING CG6865 UPSTREAM CG14074	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Ubx
X	18661147	X_18661147_SNP [dm3] X_18767114_SNP [dm6]	C	T	1.479e^-5	0.094	INTRON CCKLR-17D3	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_zfh1
2L	15319482	2L_15319482_SNP [dm3] 2L_15319482_SNP [dm6]	T	A	1.485e^-5	0.094	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	6094882	3R_6094882_SNP [dm3] 3R_10269160_SNP [dm6]	C	T	1.494e^-5	0.094	INTRON CG43143
2L	11024937	2L_11024937_SNP [dm3] 2L_11024937_SNP [dm6]	T	C	1.496e^-5	0.094	INTRON Samuel
3L	2481681	3L_2481681_SNP [dm3] 3L_2481681_SNP [dm6]	A	T	1.498e^-5	0.094	INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
3L	4486120	3L_4486120_SNP [dm3] 3L_4486120_SNP [dm6]	C	G	1.510e^-5	0.094	SYNONYMOUS_CODING CG13722	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	10090728	3L_10090728_SNP [dm3] 3L_10097628_SNP [dm6]	C	A	1.523e^-5	0.095	INTRON dpr6 & 1 other
2L	5284643	2L_5284643_SNP [dm3] 2L_5284643_SNP [dm6]	C	A	1.535e^-5	0.095	INTERGENIC
X	19744565	X_19744565_SNP [dm3] X_19850532_SNP [dm6]	G	A	1.537e^-5	0.095	UPSTREAM pico INTRON pico	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	810198	3R_810198_SNP [dm3] 3R_4984476_SNP [dm6]	C	A	1.540e^-5	0.095	UPSTREAM CG14662 DOWNSTREAM CR43424 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2L	8884163	2L_8884163_SNP [dm3] 2L_8884163_SNP [dm6]	T	C	1.544e^-5	0.095	INTERGENIC
2L	17870833	2L_17870833_SNP [dm3] 2L_17870833_SNP [dm6]	C	A	1.552e^-5	0.095	INTRON CadN2
3L	10091559	3L_10091559_SNP [dm3] 3L_10098459_SNP [dm6]	T	A	1.559e^-5	0.095	UPSTREAM CG42825 DOWNSTREAM CG42826 INTRON dpr6
X	20959606	X_20959606_SNP [dm3] X_21088579_SNP [dm6]	C	T	1.583e^-5	0.096	INTERGENIC
X	16417652	X_16417652_SNP [dm3] X_16523619_SNP [dm6]	T	C	1.589e^-5	0.096	NON_SYNONYMOUS_CODING Cnx14D INTRON para
2R	15859369	2R_15859369_SNP [dm3] 2R_19971864_SNP [dm6]	A	T	1.606e^-5	0.097	INTERGENIC
X	2664657	X_2664657_SNP [dm3] X_2770624_SNP [dm6]	G	C	1.608e^-5	0.097	INTRON kirre
3R	791838	3R_791838_SNP [dm3] 3R_4966116_SNP [dm6]	A	T	1.626e^-5	0.097	INTRON CG1124	TF binding site mE1_TFBS_disco mE1_TFBS_HSA
3L	1773058	3L_1773058_SNP [dm3] 3L_1773058_SNP [dm6]	C	T	1.631e^-5	0.097	SYNONYMOUS_CODING CG13933 UPSTREAM CR44351	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	10841844	X_10841844_SNP [dm3] X_10947811_SNP [dm6]	C	A	1.639e^-5	0.097	NON_SYNONYMOUS_CODING Myo10A	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	17403881	3L_17403881_DEL [dm3] 3L_17410781_DEL [dm6]	GAG	G	1.649e^-5	0.097	INTRON blot	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens
2L	5079944	2L_5079944_SNP [dm3] 2L_5079944_SNP [dm6]	G	A	1.652e^-5	0.097	INTRON pgant5	TF binding site BDTNP1_TFBS_dl
3L	18488380	3L_18488380_SNP [dm3] 3L_18495280_SNP [dm6]	A	G	1.654e^-5	0.097	INTRON AstC-R2
2L	9557704	2L_9557704_SNP [dm3] 2L_9557704_SNP [dm6]	G	A	1.657e^-5	0.097	INTRON jp
X	14760035	X_14760035_SNP [dm3] X_14866002_SNP [dm6]	A	G	1.660e^-5	0.097	UTR_5_PRIME CG9518 INTRON Flo2
X	10381386	X_10381386_SNP [dm3] X_10487353_SNP [dm6]	C	A	1.670e^-5	0.097	UPSTREAM CG32687 INTERGENIC
3R	23992220	3R_23992220_SNP [dm3] 3R_28166498_SNP [dm6]	A	G	1.671e^-5	0.097	INTRON CG34354
3L	21601798	3L_21601798_SNP [dm3] 3L_21608698_SNP [dm6]	A	G	1.712e^-5	0.099	INTRON TfAP-2	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	810193	3R_810193_SNP [dm3] 3R_4984471_SNP [dm6]	C	A	1.717e^-5	0.099	UPSTREAM CG14662 DOWNSTREAM CR43424 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2L	672963	2L_672963_INS [dm3] 2L_672963_INS [dm6]	T	TTT	1.732e^-5	0.1	INTRON ds
3R	14603829	3R_14603829_SNP [dm3] 3R_18778107_SNP [dm6]	G	A	1.736e^-5	0.1	INTRON CG7720
X	16416028	X_16416028_INS [dm3] X_16521995_INS [dm6]	T	TGGGTA	1.742e^-5	0.1	DOWNSTREAM Cnx14D INTRON para
3R	14344934	3R_14344934_SNP [dm3] 3R_18519212_SNP [dm6]	G	T	1.764e^-5	0.1	INTRON fru
X	9185496	X_9185496_SNP [dm3] X_9291463_SNP [dm6]	T	G	1.766e^-5	0.1	INTRON lz
3R	15195747	3R_15195747_SNP [dm3] 3R_19370025_SNP [dm6]	G	A	1.767e^-5	0.1	INTRON Ino80
3R	10044201	3R_10044201_SNP [dm3] 3R_14218479_SNP [dm6]	T	A	1.771e^-5	0.1	SYNONYMOUS_CODING CG31326 UPSTREAM CG9649
3R	2208684	3R_2208684_SNP [dm3] 3R_6382962_SNP [dm6]	G	A	1.780e^-5	0.1	START_GAINED godzilla UTR_5_PRIME godzilla DOWNSTREAM TfIIFalpha	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_zfh1
3L	4231528	3L_4231528_SNP [dm3] 3L_4231528_SNP [dm6]	A	T	1.780e^-5	0.1	INTRON ImpL2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	15337302	2L_15337302_SNP [dm3] 2L_15337302_SNP [dm6]	G	C	1.783e^-5	0.1	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	24108202	3R_24108202_SNP [dm3] 3R_28282480_SNP [dm6]	G	T	1.790e^-5	0.1	UPSTREAM CG34436 INTERGENIC
X	19764020	X_19764020_SNP [dm3] X_19869987_SNP [dm6]	A	G	1.791e^-5	0.1	SYNONYMOUS_CODING Hers	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	3815712	2R_3815712_SNP [dm3] 2R_7928207_SNP [dm6]	G	T	1.814e^-5	0.101	SYNONYMOUS_CODING CG8791	TF binding site mE1_TFBS_cad
2L	15338050	2L_15338050_SNP [dm3] 2L_15338050_SNP [dm6]	T	A	1.823e^-5	0.101	INTERGENIC	TF binding site mE1_TFBS_cad
2L	525197	2L_525197_SNP [dm3] 2L_525197_SNP [dm6]	C	T	1.823e^-5	0.101	INTRON ush	TF binding site mE1_TFBS_inv mE1_TFBS_Kr
2L	10833214	2L_10833214_SNP [dm3] 2L_10833214_SNP [dm6]	T	C	1.824e^-5	0.101	INTRON Nos
2L	3937120	2L_3937120_SNP [dm3] 2L_3937120_SNP [dm6]	G	T	1.835e^-5	0.101	INTRON fred
3L	13248094	3L_13248094_SNP [dm3] 3L_13254994_SNP [dm6]	T	A	1.848e^-5	0.101	INTRON caps
3R	810197	3R_810197_SNP [dm3] 3R_4984475_SNP [dm6]	T	A	1.858e^-5	0.101	UPSTREAM CG14662 DOWNSTREAM CR43424 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
3L	16553942	3L_16553942_SNP [dm3] 3L_16560842_SNP [dm6]	C	A	1.868e^-5	0.101	INTERGENIC
X	11815639	X_11815639_SNP [dm3] X_11921606_SNP [dm6]	T	A	1.869e^-5	0.101	DOWNSTREAM Sclp INTRON Sclp
3L	21563209	3L_21563209_SNP [dm3] 3L_21570109_SNP [dm6]	G	A	1.869e^-5	0.101	SYNONYMOUS_CODING Smc5
2L	18677264	2L_18677264_DEL [dm3] 2L_18677264_DEL [dm6]	TC	T	1.879e^-5	0.102	UTR_5_PRIME CG31751 UPSTREAM Mst36Fa	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3L	18437309	3L_18437309_SNP [dm3] 3L_18444209_SNP [dm6]	A	T	1.887e^-5	0.102	INTERGENIC
3L	9644676	3L_9644676_SNP [dm3] 3L_9651576_SNP [dm6]	C	T	1.918e^-5	0.103	INTRON fry & 1 other
3R	23992508	3R_23992508_SNP [dm3] 3R_28166786_SNP [dm6]	C	T	1.933e^-5	0.103	INTRON CG34354
2L	11490584	2L_11490584_SNP [dm3] 2L_11490584_SNP [dm6]	C	A	1.936e^-5	0.103	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	857561	3R_857561_SNP [dm3] 3R_5031839_SNP [dm6]	A	C	1.947e^-5	0.103	INTERGENIC
2L	12523617	2L_12523617_SNP [dm3] 2L_12523617_SNP [dm6]	C	T	1.948e^-5	0.103	INTRON bun
3L	1530313	3L_1530313_SNP [dm3] 3L_1530313_SNP [dm6]	T	A	1.952e^-5	0.103	NON_SYNONYMOUS_CODING Ir62a INTRON CG12090	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	15276729	2L_15276729_SNP [dm3] 2L_15276729_SNP [dm6]	A	G	1.967e^-5	0.104	INTERGENIC
2L	16815637	2L_16815637_SNP [dm3] 2L_16815637_SNP [dm6]	G	C	1.971e^-5	0.104	NON_SYNONYMOUS_CODING CG13272 INTRON CG13280	TF binding site mE1_TFBS_Kr mE1_TFBS_sens
3L	10093750	3L_10093750_SNP [dm3] 3L_10100650_SNP [dm6]	C	A	1.979e^-5	0.104	NON_SYNONYMOUS_CODING CG42826 INTRON dpr6
3L	21569325	3L_21569325_DEL [dm3] 3L_21576225_DEL [dm6]	TTGAGTTTGTGTATTTCTCA...	T	1.984e^-5	0.104	DOWNSTREAM CG32441 EXON CR43939
X	20872595	X_20872595_SNP [dm3] X_21001568_SNP [dm6]	C	A	1.994e^-5	0.104	INTERGENIC
2L	14214481	2L_14214481_DEL [dm3] 2L_14214481_DEL [dm6]	AAGC	A	1.996e^-5	0.104	INTRON Dyrk2
3L	21585769	3L_21585769_SNP [dm3] 3L_21592669_SNP [dm6]	G	A	2.002e^-5	0.104	INTRON TfAP-2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	22969863	3L_22969863_SNP [dm3] 3L_22976763_SNP [dm6]	G	C	2.016e^-5	0.104	INTERGENIC	transposable element FlyBase
2L	5284412	2L_5284412_SNP [dm3] 2L_5284412_SNP [dm6]	A	T	2.017e^-5	0.104	INTERGENIC
3R	15258839	3R_15258839_SNP [dm3] 3R_19433117_SNP [dm6]	T	C	2.024e^-5	0.104	INTRON CG31221
X	22334672	X_22334672_SNP [dm3] X_22932836_SNP [dm6]	A	C	2.040e^-5	0.105	INTERGENIC
2L	11036343	2L_11036343_INS [dm3] 2L_11036343_INS [dm6]	A	AAAAGGATCTTTTAATTTG...	2.056e^-5	0.105	INTRON Samuel	TF binding site mE1_TFBS_cad
X	20550773	X_20550773_SNP [dm3] X_20679746_SNP [dm6]	A	T	2.068e^-5	0.105	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
3L	21091030	3L_21091030_SNP [dm3] 3L_21097930_SNP [dm6]	G	A	2.070e^-5	0.105	INTRON ko
X	12107452	X_12107452_SNP [dm3] X_12213419_SNP [dm6]	A	T	2.074e^-5	0.105	INTRON Ten-a
X	16436438	X_16436438_SNP [dm3] X_16542405_SNP [dm6]	C	T	2.074e^-5	0.105	UTR_3_PRIME CG9902
X	19307626	X_19307626_SNP [dm3] X_19413593_SNP [dm6]	G	T	2.076e^-5	0.105	INTRON kek5
3R	24134285	3R_24134285_SNP [dm3] 3R_28308563_SNP [dm6]	C	T	2.077e^-5	0.105	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	18677221	2L_18677221_SNP [dm3] 2L_18677221_SNP [dm6]	G	A	2.108e^-5	0.106	UTR_5_PRIME CG31751 UPSTREAM Mst36Fa	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2L	17869172	2L_17869172_SNP [dm3] 2L_17869172_SNP [dm6]	T	C	2.126e^-5	0.107	INTRON CadN2
X	13283954	X_13283954_SNP [dm3] X_13389921_SNP [dm6]	C	A	2.140e^-5	0.107	DOWNSTREAM CR44620 & 1 other INTERGENIC
3R	814548	3R_814548_SNP [dm3] 3R_4988826_SNP [dm6]	T	A	2.146e^-5	0.107	INTRON CG2022	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3L	16889164	3L_16889164_SNP [dm3] 3L_16896064_SNP [dm6]	T	C	2.152e^-5	0.107	INTRON Lmpt
3R	20380537	3R_20380537_SNP [dm3] 3R_24554815_SNP [dm6]	C	T	2.154e^-5	0.107	SYNONYMOUS_CODING Esyt2 UPSTREAM tRNA:D:96A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	1618846	2L_1618846_DEL [dm3] 2L_1618846_DEL [dm6]	CC	C	2.158e^-5	0.107	DOWNSTREAM CR44603 EXON CR44603	TF binding site mE1_TFBS_chinmo
3R	16104879	3R_16104879_SNP [dm3] 3R_20279157_SNP [dm6]	A	G	2.162e^-5	0.107	INTRON cic
X	5603816	X_5603816_SNP [dm3] X_5709783_SNP [dm6]	G	A	2.185e^-5	0.107	SYNONYMOUS_CODING CG33080	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
X	10635080	X_10635080_SNP [dm3] X_10741047_SNP [dm6]	C	T	2.187e^-5	0.107	INTRON CG32676	TF binding site BDTNP1_TFBS_dl
X	16416047	X_16416047_SNP [dm3] X_16522014_SNP [dm6]	G	A	2.194e^-5	0.107	DOWNSTREAM Cnx14D INTRON para
2L	2611366	2L_2611366_SNP [dm3] 2L_2611366_SNP [dm6]	C	T	2.202e^-5	0.108	DOWNSTREAM CG15395 INTERGENIC
3L	12060192	3L_12060192_SNP [dm3] 3L_12067092_SNP [dm6]	T	C	2.226e^-5	0.108	DOWNSTREAM Sema-5c INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Kr mE1_TFBS_ttk
3L	18443827	3L_18443827_SNP [dm3] 3L_18450727_SNP [dm6]	A	C	2.236e^-5	0.108	INTERGENIC
2R	17156353	2R_17156353_INS [dm3] 2R_21268848_INS [dm6]	T	TT	2.237e^-5	0.108	INTRON Rgk3
2L	6508376	2L_6508376_SNP [dm3] 2L_6508376_SNP [dm6]	C	T	2.275e^-5	0.109	INTRON CG31637 EXON CR44775	TF binding site BDTNP1_TFBS_hb
3R	2227478	3R_2227478_INS [dm3] 3R_6401756_INS [dm6]	A	ATC	2.279e^-5	0.109	INTRON Dmtn	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
2L	5147350	2L_5147350_SNP [dm3] 2L_5147350_SNP [dm6]	T	G	2.283e^-5	0.109	INTRON Msp300
X	10211407	X_10211407_SNP [dm3] X_10317374_SNP [dm6]	C	T	2.286e^-5	0.109	INTRON alpha-Man-I
3L	842464	3L_842464_SNP [dm3] 3L_842464_SNP [dm6]	C	G	2.293e^-5	0.109	NON_SYNONYMOUS_CODING Gr61a SYNONYMOUS_CODING Gr61a
2L	4832693	2L_4832693_DEL [dm3] 2L_4832693_DEL [dm6]	GATC	G	2.295e^-5	0.109	INTRON Ir25a	TF binding site mE1_TFBS_cad
3L	15283946	3L_15283946_SNP [dm3] 3L_15290846_SNP [dm6]	C	A	2.299e^-5	0.109	INTERGENIC	TF binding site mE1_TFBS_inv
X	8816041	X_8816041_SNP [dm3] X_8922008_SNP [dm6]	T	A	2.301e^-5	0.109	DOWNSTREAM CG12661 INTRON rdgA
3L	12060278	3L_12060278_SNP [dm3] 3L_12067178_SNP [dm6]	A	T	2.311e^-5	0.109	DOWNSTREAM Sema-5c INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Kr mE1_TFBS_ttk
3L	21569359	3L_21569359_SNP [dm3] 3L_21576259_SNP [dm6]	C	T	2.318e^-5	0.109	DOWNSTREAM CG32441 EXON CR43939
3R	5866101	3R_5866101_SNP [dm3] 3R_10040379_SNP [dm6]	G	A	2.321e^-5	0.109	INTRON Mical
3L	12059901	3L_12059901_SNP [dm3] 3L_12066801_SNP [dm6]	T	A	2.335e^-5	0.109	DOWNSTREAM Sema-5c INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Kr mE1_TFBS_ttk
3L	12060626	3L_12060626_SNP [dm3] 3L_12067526_SNP [dm6]	A	C	2.335e^-5	0.109	UTR_3_PRIME Sema-5c DOWNSTREAM Sema-5c	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3L	12060657	3L_12060657_SNP [dm3] 3L_12067557_SNP [dm6]	T	G	2.335e^-5	0.109	UTR_3_PRIME Sema-5c DOWNSTREAM Sema-5c	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
2L	17872903	2L_17872903_SNP [dm3] 2L_17872903_SNP [dm6]	C	T	2.339e^-5	0.109	INTRON CadN2
X	15880991	X_15880991_SNP [dm3] X_15986958_SNP [dm6]	G	A	2.347e^-5	0.109	UPSTREAM CG9172 DOWNSTREAM eIF5 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
X	19092905	X_19092905_MNP [dm3] X_19198872_MNP [dm6]	CCCT	TGGA	2.359e^-5	0.11	DOWNSTREAM CG7990 INTRON CG7990
2L	5141955	2L_5141955_SNP [dm3] 2L_5141955_SNP [dm6]	C	G	2.383e^-5	0.11	INTRON Msp300
3L	2693503	3L_2693503_SNP [dm3] 3L_2693503_SNP [dm6]	C	T	2.384e^-5	0.11	INTRON Fife
X	10441028	X_10441028_SNP [dm3] X_10546995_SNP [dm6]	A	G	2.395e^-5	0.11	UPSTREAM spri INTRON spri	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	16489825	X_16489825_SNP [dm3] X_16595792_SNP [dm6]	C	T	2.423e^-5	0.111	UTR_3_PRIME crl & 1 other DOWNSTREAM crl & 1 other
2L	14552403	2L_14552403_SNP [dm3] 2L_14552403_SNP [dm6]	T	C	2.441e^-5	0.112	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
2L	5141625	2L_5141625_SNP [dm3] 2L_5141625_SNP [dm6]	A	C	2.458e^-5	0.112	INTRON Msp300
3R	23052964	3R_23052964_SNP [dm3] 3R_27227242_SNP [dm6]	A	G	2.461e^-5	0.112	DOWNSTREAM CG42813 INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	18249785	2L_18249785_SNP [dm3] 2L_18249785_SNP [dm6]	C	A	2.464e^-5	0.112	INTRON CG42750
3L	8841804	3L_8841804_SNP [dm3] 3L_8848704_SNP [dm6]	G	A	2.470e^-5	0.112	INTRON dally	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	2222277	3R_2222277_SNP [dm3] 3R_6396555_SNP [dm6]	C	T	2.470e^-5	0.112	INTRON Dmtn
3L	1408011	3L_1408011_SNP [dm3] 3L_1408011_SNP [dm6]	G	A	2.478e^-5	0.112	INTRON Ptp61F
2L	20695730	2L_20695730_SNP [dm3] 2L_20695730_SNP [dm6]	T	G	2.503e^-5	0.113	INTRON Hr38
3L	10091449	3L_10091449_SNP [dm3] 3L_10098349_SNP [dm6]	C	T	2.508e^-5	0.113	UPSTREAM CG42825 INTRON dpr6
3R	12676555	3R_12676555_SNP [dm3] 3R_16850833_SNP [dm6]	C	G	2.527e^-5	0.113	INTRON iab-8 EXON iab-4	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_Trl
2L	5125427	2L_5125427_SNP [dm3] 2L_5125427_SNP [dm6]	G	A	2.531e^-5	0.113	SYNONYMOUS_CODING Msp300	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	2022623	3L_2022623_SNP [dm3] 3L_2022623_SNP [dm6]	G	A	2.533e^-5	0.113	SYNONYMOUS_CODING CG42356 UPSTREAM CG42357
3L	18450990	3L_18450990_SNP [dm3] 3L_18457890_SNP [dm6]	C	A	2.541e^-5	0.113	UPSTREAM CR44671 INTERGENIC
2L	11066160	2L_11066160_SNP [dm3] 2L_11066160_SNP [dm6]	T	C	2.547e^-5	0.113	INTRON Samuel	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	2800791	3L_2800791_SNP [dm3] 3L_2800791_SNP [dm6]	C	T	2.555e^-5	0.113	INTRON CG43444	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	2208674	3R_2208674_SNP [dm3] 3R_6382952_SNP [dm6]	C	G	2.569e^-5	0.113	UTR_5_PRIME godzilla DOWNSTREAM TfIIFalpha	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_zfh1
3L	18444440	3L_18444440_SNP [dm3] 3L_18451340_SNP [dm6]	T	A	2.570e^-5	0.113	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3L	3584848	3L_3584848_SNP [dm3] 3L_3584848_SNP [dm6]	T	A	2.573e^-5	0.113	INTRON Eip63E
X	11630524	X_11630524_SNP [dm3] X_11736491_SNP [dm6]	C	T	2.583e^-5	0.113	UTR_3_PRIME CG15221	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	15027760	2L_15027760_SNP [dm3] 2L_15027760_SNP [dm6]	A	T	2.587e^-5	0.113	NON_SYNONYMOUS_CODING CG33310 INTRON GABA-B-R1
X	6131834	X_6131834_SNP [dm3] X_6237801_SNP [dm6]	G	A	2.588e^-5	0.113	INTRON CG14445
3R	5874812	3R_5874812_SNP [dm3] 3R_10049090_SNP [dm6]	T	A	2.624e^-5	0.113	UPSTREAM CG3925 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3R	6382272	3R_6382272_SNP [dm3] 3R_10556550_SNP [dm6]	A	G	2.627e^-5	0.113	INTRON hth
2L	13908110	2L_13908110_SNP [dm3] 2L_13908110_SNP [dm6]	C	T	2.641e^-5	0.113	NON_SYNONYMOUS_CODING Ance	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	12665586	2L_12665586_SNP [dm3] 2L_12665586_SNP [dm6]	G	T	2.643e^-5	0.113	INTRON pdm2	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	20540311	3R_20540311_SNP [dm3] 3R_24714589_SNP [dm6]	C	A	2.646e^-5	0.113	UPSTREAM CG13627 INTRON CG13627
2L	15319447	2L_15319447_SNP [dm3] 2L_15319447_SNP [dm6]	A	G	2.647e^-5	0.113	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16436426	X_16436426_SNP [dm3] X_16542393_SNP [dm6]	C	T	2.647e^-5	0.113	UTR_3_PRIME CG9902
3R	17852769	3R_17852769_SNP [dm3] 3R_22027047_SNP [dm6]	G	T	2.647e^-5	0.113	UTR_5_PRIME Cchl UPSTREAM ND42	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	7517961	X_7517961_SNP [dm3] X_7623928_SNP [dm6]	G	A	2.652e^-5	0.113	INTRON ct
3L	21091060	3L_21091060_SNP [dm3] 3L_21097960_SNP [dm6]	T	A	2.652e^-5	0.113	INTRON ko
3L	21408681	3L_21408681_DEL [dm3] 3L_21415581_DEL [dm6]	ATCGCTCGTGAGTGAAGGGT...	A	2.657e^-5	0.113	INTRON rgn
X	16416044	X_16416044_SNP [dm3] X_16522011_SNP [dm6]	A	T	2.658e^-5	0.113	DOWNSTREAM Cnx14D INTRON para
2L	5141969	2L_5141969_SNP [dm3] 2L_5141969_SNP [dm6]	C	T	2.674e^-5	0.113	INTRON Msp300
3R	23682129	3R_23682129_SNP [dm3] 3R_27856407_SNP [dm6]	T	G	2.674e^-5	0.113	INTRON CG34353	TF binding site mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_inv
2L	3822675	2L_3822675_SNP [dm3] 2L_3822675_SNP [dm6]	A	C	2.675e^-5	0.113	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
2L	5141636	2L_5141636_SNP [dm3] 2L_5141636_SNP [dm6]	G	T	2.677e^-5	0.113	INTRON Msp300
2L	5542887	2L_5542887_SNP [dm3] 2L_5542887_SNP [dm6]	C	G	2.684e^-5	0.113	UTR_5_PRIME Lam UPSTREAM Hel25E & 1 other INTRON Lam	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3R	15113030	3R_15113030_SNP [dm3] 3R_19287308_SNP [dm6]	G	C	2.689e^-5	0.113	INTERGENIC
2R	19138670	2R_19138670_SNP [dm3] 2R_23251147_SNP [dm6]	A	G	2.692e^-5	0.113	INTERGENIC
3L	1980884	3L_1980884_SNP [dm3] 3L_1980884_SNP [dm6]	T	G	2.721e^-5	0.114	INTERGENIC
3R	6569295	3R_6569295_SNP [dm3] 3R_10743573_SNP [dm6]	A	C	2.728e^-5	0.114	INTRON TkR86C
3R	13166380	3R_13166380_INS [dm3] 3R_17340658_INS [dm6]	A	AAAAATACCGA...	2.731e^-5	0.114	INTRON beat-IIa
3L	10086613	3L_10086613_SNP [dm3] 3L_10093513_SNP [dm6]	C	A	2.758e^-5	0.114	NON_SYNONYMOUS_CODING CG32054 INTRON dpr6	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	6354726	3R_6354726_SNP [dm3] 3R_10529004_SNP [dm6]	T	C	2.773e^-5	0.115	INTRON hth	TF binding site mE1_TFBS_HSA
2L	17873574	2L_17873574_SNP [dm3] 2L_17873574_SNP [dm6]	C	G	2.786e^-5	0.115	INTRON CadN2
3L	22943063	3L_22943063_SNP [dm3] 3L_22949963_SNP [dm6]	C	A	2.798e^-5	0.115	INTRON Mes2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6099928	2L_6099928_SNP [dm3] 2L_6099928_SNP [dm6]	C	T	2.832e^-5	0.116	UPSTREAM CG9175 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	18648958	3L_18648958_SNP [dm3] 3L_18655858_SNP [dm6]	T	C	2.840e^-5	0.116	INTRON MYPT-75D
2L	5119308	2L_5119308_SNP [dm3] 2L_5119308_SNP [dm6]	G	A	2.846e^-5	0.116	INTRON Msp300
X	16436448	X_16436448_SNP [dm3] X_16542415_SNP [dm6]	T	C	2.848e^-5	0.116	UTR_3_PRIME CG9902
2L	5148651	2L_5148651_SNP [dm3] 2L_5148651_SNP [dm6]	T	C	2.861e^-5	0.116	INTRON Msp300
2L	4826801	2L_4826801_SNP [dm3] 2L_4826801_SNP [dm6]	G	A	2.865e^-5	0.116	SYNONYMOUS_CODING CG15628	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	7491038	3R_7491038_SNP [dm3] 3R_11665316_SNP [dm6]	G	T	2.881e^-5	0.116	INTRON CG42327	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	7491061	3R_7491061_SNP [dm3] 3R_11665339_SNP [dm6]	C	G	2.881e^-5	0.116	INTRON CG42327	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	15315494	2L_15315494_SNP [dm3] 2L_15315494_SNP [dm6]	T	G	2.896e^-5	0.116	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	6037397	3R_6037397_SNP [dm3] 3R_10211675_SNP [dm6]	G	C	2.903e^-5	0.116	INTRON Syn & 1 other
3L	2481695	3L_2481695_SNP [dm3] 3L_2481695_SNP [dm6]	A	C	2.921e^-5	0.116	INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	11941364	2L_11941364_SNP [dm3] 2L_11941364_SNP [dm6]	T	A	2.921e^-5	0.116	INTERGENIC
X	12445482	X_12445482_SNP [dm3] X_12551449_SNP [dm6]	G	A	2.929e^-5	0.116	INTRON CG43921
2L	12840644	2L_12840644_SNP [dm3] 2L_12840644_SNP [dm6]	A	C	2.933e^-5	0.116	UPSTREAM CR44970 & 1 other INTERGENIC
3L	2590625	3L_2590625_SNP [dm3] 3L_2590625_SNP [dm6]	A	C	2.946e^-5	0.116	UTR_5_PRIME dos INTRON dos	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Stat92E
2L	15291851	2L_15291851_SNP [dm3] 2L_15291851_SNP [dm6]	T	C	2.946e^-5	0.116	NON_SYNONYMOUS_CODING CG15260 UPSTREAM ms_2_35Ci	TF binding site mE1_TFBS_HSA
3R	23538958	3R_23538958_SNP [dm3] 3R_27713236_SNP [dm6]	G	A	2.950e^-5	0.116	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	4488581	2L_4488581_SNP [dm3] 2L_4488581_SNP [dm6]	A	C	2.954e^-5	0.116	SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	6640915	X_6640915_SNP [dm3] X_6746882_SNP [dm6]	G	A	2.955e^-5	0.116	UPSTREAM CG14439 DOWNSTREAM CR44895 EXON CR44964	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	8886012	2L_8886012_SNP [dm3] 2L_8886012_SNP [dm6]	C	T	2.966e^-5	0.116	DOWNSTREAM CR44415 INTERGENIC
X	13984015	X_13984015_SNP [dm3] X_14089982_SNP [dm6]	C	A	2.968e^-5	0.116	INTERGENIC
X	5502112	X_5502112_SNP [dm3] X_5608079_SNP [dm6]	G	A	2.976e^-5	0.116	INTRON Vsx1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16416049	X_16416049_SNP [dm3] X_16522016_SNP [dm6]	A	G	2.979e^-5	0.116	DOWNSTREAM Cnx14D INTRON para
2L	5189277	2L_5189277_SNP [dm3] 2L_5189277_SNP [dm6]	A	T	2.981e^-5	0.116	SYNONYMOUS_CODING Msp300	TF binding site mE1_TFBS_HSA
2L	9780833	2L_9780833_SNP [dm3] 2L_9780833_SNP [dm6]	C	A	2.984e^-5	0.116	INTERGENIC
2L	2404649	2L_2404649_SNP [dm3] 2L_2404649_SNP [dm6]	A	G	2.984e^-5	0.116	INTRON VGlut
3R	2209177	3R_2209177_INS [dm3] 3R_6383455_INS [dm6]	G	GCGCATTATCGCTTGTCCTT...	2.989e^-5	0.116	UTR_5_PRIME godzilla UPSTREAM godzilla DOWNSTREAM TfIIFalpha INTRON godzilla	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_zfh1
3L	18478967	3L_18478967_SNP [dm3] 3L_18485867_SNP [dm6]	G	C	2.991e^-5	0.116	UTR_3_PRIME AstC-R2 DOWNSTREAM AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
3L	18448013	3L_18448013_SNP [dm3] 3L_18454913_SNP [dm6]	G	A	2.995e^-5	0.116	INTERGENIC
3L	17472077	3L_17472077_SNP [dm3] 3L_17478977_SNP [dm6]	T	C	2.996e^-5	0.116	UPSTREAM qjt & 1 other INTERGENIC
3L	7976112	3L_7976112_SNP [dm3] 3L_7983012_SNP [dm6]	G	T	2.997e^-5	0.116	INTRON nmo	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3L	12864523	3L_12864523_SNP [dm3] 3L_12871423_SNP [dm6]	C	T	3.021e^-5	0.116	INTERGENIC
3L	12333691	3L_12333691_SNP [dm3] 3L_12340591_SNP [dm6]	A	T	3.034e^-5	0.116	INTRON CrzR	TF binding site mE1_TFBS_cad
2L	11066197	2L_11066197_SNP [dm3] 2L_11066197_SNP [dm6]	A	T	3.036e^-5	0.116	INTRON Samuel	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	22166830	3L_22166830_SNP [dm3] 3L_22173730_SNP [dm6]	A	G	3.040e^-5	0.116	INTRON olf413	TF binding site mE1_TFBS_inv
2L	16827077	2L_16827077_SNP [dm3] 2L_16827077_SNP [dm6]	G	A	3.042e^-5	0.116	UPSTREAM CG31739 DOWNSTREAM mdy INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10448549	X_10448549_SNP [dm3] X_10554516_SNP [dm6]	T	C	3.056e^-5	0.117	INTRON spri
3R	4782765	3R_4782765_SNP [dm3] 3R_8957043_SNP [dm6]	T	C	3.067e^-5	0.117	INTRON CG11966	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	11630953	X_11630953_SNP [dm3] X_11736920_SNP [dm6]	A	T	3.069e^-5	0.117	DOWNSTREAM CG15221 INTERGENIC	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	6036260	3R_6036260_SNP [dm3] 3R_10210538_SNP [dm6]	G	A	3.094e^-5	0.117	INTRON Syn & 1 other
3L	15283891	3L_15283891_SNP [dm3] 3L_15290791_SNP [dm6]	C	A	3.162e^-5	0.119	INTERGENIC	TF binding site mE1_TFBS_inv
X	6131836	X_6131836_SNP [dm3] X_6237803_SNP [dm6]	T	C	3.168e^-5	0.119	INTRON CG14445
3R	15093336	3R_15093336_SNP [dm3] 3R_19267614_SNP [dm6]	A	G	3.171e^-5	0.119	INTERGENIC
X	6131831	X_6131831_SNP [dm3] X_6237798_SNP [dm6]	C	T	3.176e^-5	0.119	INTRON CG14445
X	6099712	X_6099712_SNP [dm3] X_6205679_SNP [dm6]	A	G	3.188e^-5	0.119	INTERGENIC
3L	12505002	3L_12505002_SNP [dm3] 3L_12511902_SNP [dm6]	C	T	3.195e^-5	0.119	INTRON sti
X	6131830	X_6131830_SNP [dm3] X_6237797_SNP [dm6]	T	A	3.195e^-5	0.119	INTRON CG14445
3R	24108186	3R_24108186_SNP [dm3] 3R_28282464_SNP [dm6]	A	G	3.205e^-5	0.119	UPSTREAM CG34436 INTERGENIC
X	8829373	X_8829373_SNP [dm3] X_8935340_SNP [dm6]	A	G	3.210e^-5	0.119	INTRON rdgA
X	5915176	X_5915176_SNP [dm3] X_6021143_SNP [dm6]	T	G	3.214e^-5	0.119	INTERGENIC
2L	5079950	2L_5079950_SNP [dm3] 2L_5079950_SNP [dm6]	G	A	3.220e^-5	0.119	INTRON pgant5	TF binding site BDTNP1_TFBS_dl
3L	7975739	3L_7975739_SNP [dm3] 3L_7982639_SNP [dm6]	T	A	3.243e^-5	0.119	INTRON nmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	7840169	2R_7840169_SNP [dm3] 2R_11952664_SNP [dm6]	T	A	3.247e^-5	0.119	INTRON CG13188
3R	6034946	3R_6034946_SNP [dm3] 3R_10209224_SNP [dm6]	C	T	3.247e^-5	0.119	INTRON Syn & 1 other
3R	6358352	3R_6358352_SNP [dm3] 3R_10532630_SNP [dm6]	G	T	3.250e^-5	0.119	INTRON hth
X	19092895	X_19092895_INS [dm3] X_19198862_INS [dm6]	G	GCTAT	3.254e^-5	0.119	DOWNSTREAM CG7990 INTRON CG7990
X	19092897	X_19092897_MNP [dm3] X_19198864_MNP [dm6]	ACG	GAT	3.254e^-5	0.119	DOWNSTREAM CG7990 INTRON CG7990
2L	5137113	2L_5137113_SNP [dm3] 2L_5137113_SNP [dm6]	T	C	3.255e^-5	0.119	SYNONYMOUS_CODING Msp300 INTRON Msp300
2L	18673259	2L_18673259_SNP [dm3] 2L_18673259_SNP [dm6]	T	C	3.256e^-5	0.119	UTR_5_PRIME CG43339 DOWNSTREAM Mst36Fb
3R	6039042	3R_6039042_SNP [dm3] 3R_10213320_SNP [dm6]	C	T	3.270e^-5	0.119	UPSTREAM Timp INTRON Syn	TF binding site BDTNP1_TFBS_z
2L	14282364	2L_14282364_SNP [dm3] 2L_14282364_SNP [dm6]	A	G	3.288e^-5	0.12	INTRON wb
3R	4391378	3R_4391378_SNP [dm3] 3R_8565656_SNP [dm6]	G	C	3.295e^-5	0.12	NON_SYNONYMOUS_CODING Cenp-C	TF binding site mE1_TFBS_inv mE1_TFBS_sens
3R	23992603	3R_23992603_SNP [dm3] 3R_28166881_SNP [dm6]	T	A	3.301e^-5	0.12	INTRON CG34354
X	1697713	X_1697713_SNP [dm3] X_1803680_SNP [dm6]	G	A	3.317e^-5	0.12	INTRON CG42666	TF binding site mE1_TFBS_chinmo
X	9410115	X_9410115_DEL [dm3] X_9516082_DEL [dm6]	GT	G	3.317e^-5	0.12	INTRON CG32700
X	10344841	X_10344841_SNP [dm3] X_10450808_SNP [dm6]	A	T	3.326e^-5	0.12	INTRON CG32683
X	3466638	X_3466638_SNP [dm3] X_3572605_SNP [dm6]	G	C	3.344e^-5	0.12	SYNONYMOUS_CODING CG2875 UPSTREAM CG32791 DOWNSTREAM ppk8	TF binding site BDTNP1_TFBS_z mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens
3L	3927541	3L_3927541_SNP [dm3] 3L_3927541_SNP [dm6]	T	A	3.363e^-5	0.121	INTRON Eip63F-1
X	6433954	X_6433954_SNP [dm3] X_6539921_SNP [dm6]	C	A	3.380e^-5	0.121	UPSTREAM CG34417 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	3929761	3L_3929761_DEL [dm3] 3L_3929761_DEL [dm6]	AAATAC	A	3.412e^-5	0.121	UPSTREAM Eip63F-1 INTRON Eip63F-1
3R	2222279	3R_2222279_SNP [dm3] 3R_6396557_SNP [dm6]	A	C	3.426e^-5	0.121	INTRON Dmtn
3L	9949224	3L_9949224_SNP [dm3] 3L_9956124_SNP [dm6]	C	A	3.428e^-5	0.121	INTRON CG34356
3L	12875559	3L_12875559_DEL [dm3] 3L_12882459_DEL [dm6]	CGCGAT	C	3.433e^-5	0.121	INTERGENIC
2L	2659993	2L_2659993_SNP [dm3] 2L_2659993_SNP [dm6]	T	A	3.433e^-5	0.121	INTERGENIC
X	9596987	X_9596987_SNP [dm3] X_9702954_SNP [dm6]	C	G	3.443e^-5	0.121	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
3L	8619729	3L_8619729_SNP [dm3] 3L_8626629_SNP [dm6]	A	C	3.446e^-5	0.121	INTRON Zasp66
3R	13166381	3R_13166381_DEL [dm3] 3R_17340659_DEL [dm6]	CTGTCGGT	C	3.448e^-5	0.121	INTRON beat-IIa
2L	18672306	2L_18672306_SNP [dm3] 2L_18672306_SNP [dm6]	A	T	3.453e^-5	0.121	INTRON CG43339
3L	3896144	3L_3896144_SNP [dm3] 3L_3896144_SNP [dm6]	T	A	3.482e^-5	0.122	UPSTREAM CG14977 INTRON Gr63a	TF binding site mE1_TFBS_sens
2L	17896477	2L_17896477_SNP [dm3] 2L_17896477_SNP [dm6]	A	C	3.510e^-5	0.123	INTERGENIC
X	13284095	X_13284095_SNP [dm3] X_13390062_SNP [dm6]	T	A	3.516e^-5	0.123	DOWNSTREAM CR44620 & 1 other INTERGENIC
2R	1357848	2R_1357848_SNP [dm3] 2R_5470343_SNP [dm6]	G	T	3.520e^-5	0.123	INTRON CG30440	transposable element FlyBase
X	10400896	X_10400896_SNP [dm3] X_10506863_SNP [dm6]	C	G	3.528e^-5	0.123	INTRON spri
X	6131828	X_6131828_SNP [dm3] X_6237795_SNP [dm6]	G	A	3.540e^-5	0.123	INTRON CG14445
X	12646171	X_12646171_SNP [dm3] X_12752138_SNP [dm6]	C	T	3.557e^-5	0.123	EXON CR44619	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
2L	18673474	2L_18673474_SNP [dm3] 2L_18673474_SNP [dm6]	T	C	3.558e^-5	0.123	SYNONYMOUS_CODING Mst36Fb UPSTREAM CG43339
3L	9644648	3L_9644648_SNP [dm3] 3L_9651548_SNP [dm6]	A	G	3.561e^-5	0.123	INTRON fry & 1 other
3R	5875277	3R_5875277_SNP [dm3] 3R_10049555_SNP [dm6]	C	A	3.567e^-5	0.123	NON_SYNONYMOUS_CODING CG3925 UPSTREAM CG12811	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	9868764	X_9868764_SNP [dm3] X_9974731_SNP [dm6]	G	A	3.581e^-5	0.123	INTRON CG43386
3L	16551038	3L_16551038_SNP [dm3] 3L_16557938_SNP [dm6]	A	G	3.625e^-5	0.125	UTR_3_PRIME CG4229	TF binding site mE1_TFBS_cad
2L	12175943	2L_12175943_SNP [dm3] 2L_12175943_SNP [dm6]	T	G	3.654e^-5	0.126	INTRON aret & 1 other	TF binding site mE1_TFBS_HSA
2R	7839091	2R_7839091_SNP [dm3] 2R_11951586_SNP [dm6]	A	G	3.666e^-5	0.126	INTRON CG13188
3L	16549674	3L_16549674_SNP [dm3] 3L_16556574_SNP [dm6]	C	G	3.671e^-5	0.126	UPSTREAM CG4229 INTERGENIC
2L	6115402	2L_6115402_SNP [dm3] 2L_6115402_SNP [dm6]	T	A	3.676e^-5	0.126	INTRON stai	TF binding site BDTNP1_TFBS_dl
2R	14529093	2R_14529093_DEL [dm3] 2R_18641588_DEL [dm6]	AA	A	3.695e^-5	0.126	DOWNSTREAM CheA56a INTRON SP2637	TF binding site mE1_TFBS_cad
3L	2391181	3L_2391181_SNP [dm3] 3L_2391181_SNP [dm6]	T	A	3.699e^-5	0.126	UPSTREAM CG32299 & 1 other INTRON CG45186	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
2L	16831187	2L_16831187_SNP [dm3] 2L_16831187_SNP [dm6]	T	C	3.712e^-5	0.126	NON_SYNONYMOUS_CODING CG31739 DOWNSTREAM CG13282	TF binding site mE1_TFBS_cad
2L	17867835	2L_17867835_SNP [dm3] 2L_17867835_SNP [dm6]	A	T	3.713e^-5	0.126	INTRON CadN2
3R	4962756	3R_4962756_SNP [dm3] 3R_9137034_SNP [dm6]	G	A	3.720e^-5	0.126	INTRON pum
3L	4007122	3L_4007122_SNP [dm3] 3L_4007122_SNP [dm6]	A	C	3.731e^-5	0.126	DOWNSTREAM CG14985 INTERGENIC
3R	6052111	3R_6052111_SNP [dm3] 3R_10226389_SNP [dm6]	G	T	3.733e^-5	0.126	UPSTREAM CG42795 DOWNSTREAM CG34107 INTRON CG42795	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	15507853	3L_15507853_SNP [dm3] 3L_15514753_SNP [dm6]	G	C	3.742e^-5	0.126	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	9645910	3L_9645910_SNP [dm3] 3L_9652810_SNP [dm6]	T	A	3.781e^-5	0.127	INTRON fry & 1 other
X	6131822	X_6131822_MNP [dm3] X_6237789_MNP [dm6]	TAT	CCA	3.785e^-5	0.127	INTRON CG14445
3R	6099893	3R_6099893_SNP [dm3] 3R_10274171_SNP [dm6]	G	A	3.818e^-5	0.128	INTRON CG43143
3L	18453296	3L_18453296_SNP [dm3] 3L_18460196_SNP [dm6]	A	C	3.826e^-5	0.128	INTRON CG32196	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	14728278	3R_14728278_SNP [dm3] 3R_18902556_SNP [dm6]	G	C	3.848e^-5	0.128	SYNONYMOUS_CODING CG34284 UPSTREAM CG14294
3L	2555123	3L_2555123_SNP [dm3] 3L_2555123_SNP [dm6]	C	T	3.853e^-5	0.128	UTR_3_PRIME msn UPSTREAM Spn DOWNSTREAM msn
3R	5867959	3R_5867959_SNP [dm3] 3R_10042237_SNP [dm6]	C	T	3.855e^-5	0.128	INTRON Mical	TF binding site BDTNP1_TFBS_dl mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3R	2209232	3R_2209232_SNP [dm3] 3R_6383510_SNP [dm6]	G	C	3.856e^-5	0.128	START_GAINED godzilla UTR_5_PRIME godzilla UPSTREAM godzilla DOWNSTREAM TfIIFalpha INTRON godzilla	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_zfh1
2L	13928673	2L_13928673_SNP [dm3] 2L_13928673_SNP [dm6]	T	A	3.869e^-5	0.128	INTRON Ance-3
X	10971896	X_10971896_SNP [dm3] X_11077863_SNP [dm6]	T	C	3.911e^-5	0.129	INTRON sev	TF binding site mE1_TFBS_chinmo
2R	4758574	2R_4758574_SNP [dm3] 2R_8871069_SNP [dm6]	T	A	3.927e^-5	0.13	INTRON RyR
X	16416051	X_16416051_SNP [dm3] X_16522018_SNP [dm6]	G	A	3.930e^-5	0.13	DOWNSTREAM Cnx14D INTRON para
X	10940623	X_10940623_SNP [dm3] X_11046590_SNP [dm6]	G	A	3.977e^-5	0.13	INTRON CG11160
2L	419616	2L_419616_SNP [dm3] 2L_419616_SNP [dm6]	T	A	3.980e^-5	0.13	UTR_5_PRIME CG13690 UPSTREAM RpLP1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	11815600	X_11815600_SNP [dm3] X_11921567_SNP [dm6]	A	T	3.981e^-5	0.13	UPSTREAM CR32660 DOWNSTREAM Sclp INTRON Sclp
2L	17873892	2L_17873892_SNP [dm3] 2L_17873892_SNP [dm6]	T	A	3.983e^-5	0.13	INTRON CadN2
3L	17538550	3L_17538550_SNP [dm3] 3L_17545450_SNP [dm6]	A	C	4.045e^-5	0.132	INTRON Nedd4	TF binding site mE1_TFBS_sens
3R	823317	3R_823317_SNP [dm3] 3R_4997595_SNP [dm6]	T	C	4.074e^-5	0.132	INTRON CG2022	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	4793654	3R_4793654_SNP [dm3] 3R_8967932_SNP [dm6]	C	A	4.077e^-5	0.132	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad
3L	2799858	3L_2799858_SNP [dm3] 3L_2799858_SNP [dm6]	A	G	4.088e^-5	0.132	INTRON CG43444	TF binding site mE1_TFBS_cad mE1_TFBS_sbb
X	11808839	X_11808839_DEL [dm3] X_11914806_DEL [dm6]	GCCA	G	4.094e^-5	0.132	INTRON pot	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	18875119	3L_18875119_SNP [dm3] 3L_18882019_SNP [dm6]	C	T	4.109e^-5	0.132	INTRON CG3961
2L	12840689	2L_12840689_SNP [dm3] 2L_12840689_SNP [dm6]	A	T	4.110e^-5	0.132	UPSTREAM CR44970 & 1 other INTERGENIC
3R	7101386	3R_7101386_SNP [dm3] 3R_11275664_SNP [dm6]	C	A	4.115e^-5	0.132	INTRON CR31386
2L	17893888	2L_17893888_SNP [dm3] 2L_17893888_SNP [dm6]	A	C	4.116e^-5	0.132	EXON CR43420
3R	2208974	3R_2208974_SNP [dm3] 3R_6383252_SNP [dm6]	C	A	4.123e^-5	0.132	UTR_5_PRIME godzilla DOWNSTREAM TfIIFalpha	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_zfh1
3R	6362323	3R_6362323_INS [dm3] 3R_10536601_INS [dm6]	T	TGTTCAAAGG	4.140e^-5	0.132	INTRON hth	TF binding site BDTNP1_TFBS_dl
2L	1102995	2L_1102995_SNP [dm3] 2L_1102995_SNP [dm6]	G	A	4.142e^-5	0.132	UPSTREAM CG4629 DOWNSTREAM mtRNApol INTERGENIC
2L	615874	2L_615874_SNP [dm3] 2L_615874_SNP [dm6]	T	C	4.143e^-5	0.132	INTERGENIC
3L	2481684	3L_2481684_SNP [dm3] 3L_2481684_SNP [dm6]	G	T	4.148e^-5	0.132	INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
3R	20667801	3R_20667801_SNP [dm3] 3R_24842079_SNP [dm6]	T	C	4.153e^-5	0.132	UTR_5_PRIME Esp UPSTREAM CG33658
3L	10125152	3L_10125152_SNP [dm3] 3L_10132052_SNP [dm6]	A	C	4.163e^-5	0.132	INTRON dpr6
3R	810662	3R_810662_DEL [dm3] 3R_4984940_DEL [dm6]	CGACGCCGACTGCATTTCAT...	C	4.165e^-5	0.132	UPSTREAM CG14662 EXON CR43424	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
2L	12178543	2L_12178543_SNP [dm3] 2L_12178543_SNP [dm6]	C	A	4.171e^-5	0.132	UPSTREAM atilla INTRON aret	TF binding site mE1_TFBS_HSA
2L	5148532	2L_5148532_SNP [dm3] 2L_5148532_SNP [dm6]	C	A	4.174e^-5	0.132	INTRON Msp300
2L	2659823	2L_2659823_SNP [dm3] 2L_2659823_SNP [dm6]	A	T	4.198e^-5	0.132	INTERGENIC
3R	6499347	3R_6499347_SNP [dm3] 3R_10673625_SNP [dm6]	A	G	4.198e^-5	0.132	INTERGENIC
2L	8882496	2L_8882496_SNP [dm3] 2L_8882496_SNP [dm6]	G	A	4.216e^-5	0.132	INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2L	8882880	2L_8882880_SNP [dm3] 2L_8882880_SNP [dm6]	T	A	4.216e^-5	0.132	INTERGENIC
2L	8884463	2L_8884463_SNP [dm3] 2L_8884463_SNP [dm6]	T	C	4.216e^-5	0.132	INTERGENIC
3L	18443693	3L_18443693_SNP [dm3] 3L_18450593_SNP [dm6]	T	A	4.216e^-5	0.132	INTERGENIC
3L	9652468	3L_9652468_SNP [dm3] 3L_9659368_SNP [dm6]	T	G	4.238e^-5	0.132	UTR_3_PRIME CG33696 INTRON fry
3R	12676674	3R_12676674_SNP [dm3] 3R_16850952_SNP [dm6]	A	G	4.241e^-5	0.132	INTRON iab-8 EXON iab-4	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_Trl
2L	15304116	2L_15304116_DEL [dm3] 2L_15304116_DEL [dm6]	AA	A	4.243e^-5	0.132	INTERGENIC
3L	14581782	3L_14581782_SNP [dm3] 3L_14588682_SNP [dm6]	G	T	4.259e^-5	0.132	INTRON HGTX
2L	615879	2L_615879_SNP [dm3] 2L_615879_SNP [dm6]	G	T	4.259e^-5	0.132	INTERGENIC
3R	5876087	3R_5876087_SNP [dm3] 3R_10050365_SNP [dm6]	C	T	4.261e^-5	0.132	SYNONYMOUS_CODING CG3925	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3R	4991729	3R_4991729_SNP [dm3] 3R_9166007_SNP [dm6]	G	C	4.266e^-5	0.132	INTRON pum
3L	1408005	3L_1408005_SNP [dm3] 3L_1408005_SNP [dm6]	A	G	4.307e^-5	0.133	INTRON Ptp61F
2L	17872830	2L_17872830_SNP [dm3] 2L_17872830_SNP [dm6]	A	G	4.309e^-5	0.133	INTRON CadN2
2R	18790236	2R_18790236_SNP [dm3] 2R_22902713_SNP [dm6]	A	T	4.312e^-5	0.133	INTRON nahoda
3R	17682784	3R_17682784_SNP [dm3] 3R_21857062_SNP [dm6]	G	C	4.316e^-5	0.133	UPSTREAM glec INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
3R	5306663	3R_5306663_SNP [dm3] 3R_9480941_SNP [dm6]	A	T	4.326e^-5	0.133	INTRON CG16779	TF binding site BDTNP1_TFBS_dl
X	19092912	X_19092912_SNP [dm3] X_19198879_SNP [dm6]	A	T	4.343e^-5	0.133	DOWNSTREAM CG7990 INTRON CG7990
X	10957224	X_10957224_SNP [dm3] X_11063191_SNP [dm6]	G	A	4.349e^-5	0.133	UPSTREAM CG1537 INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	10469433	X_10469433_SNP [dm3] X_10575400_SNP [dm6]	T	G	4.352e^-5	0.133	NON_SYNONYMOUS_CODING spri
2L	14068088	2L_14068088_DEL [dm3] 2L_14068088_DEL [dm6]	AA	G	4.361e^-5	0.133	INTRON nAChRalpha5
3R	5876308	3R_5876308_SNP [dm3] 3R_10050586_SNP [dm6]	A	C	4.370e^-5	0.133	NON_SYNONYMOUS_CODING CG3925 DOWNSTREAM Fancl	TF binding site mE1_TFBS_cad mE1_TFBS_inv mE1_TFBS_sens
2R	17792510	2R_17792510_SNP [dm3] 2R_21905005_SNP [dm6]	A	T	4.391e^-5	0.133	INTRON Fili
X	2930952	X_2930952_SNP [dm3] X_3036919_SNP [dm6]	C	A	4.411e^-5	0.133	INTRON kirre
2L	18670874	2L_18670874_INS [dm3] 2L_18670874_INS [dm6]	C	CA	4.413e^-5	0.133	UPSTREAM CG43338 DOWNSTREAM CG43339 INTRON CG43338
X	8535778	X_8535778_INS [dm3] X_8641745_INS [dm6]	T	TTGTAT	4.415e^-5	0.133	INTRON oc
3L	18453315	3L_18453315_SNP [dm3] 3L_18460215_SNP [dm6]	C	T	4.425e^-5	0.133	INTRON CG32196	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	13483007	3R_13483007_SNP [dm3] 3R_17657285_SNP [dm6]	G	A	4.429e^-5	0.133	DOWNSTREAM tRNA:CR31577 INTRON CG14322
X	20955351	X_20955351_SNP [dm3] X_21084324_SNP [dm6]	G	A	4.430e^-5	0.133	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	8886011	2L_8886011_SNP [dm3] 2L_8886011_SNP [dm6]	A	T	4.434e^-5	0.133	DOWNSTREAM CR44415 INTERGENIC
X	16415972	X_16415972_SNP [dm3] X_16521939_SNP [dm6]	G	A	4.454e^-5	0.134	INTRON para
2R	18362111	2R_18362111_SNP [dm3] 2R_22474606_SNP [dm6]	G	A	4.482e^-5	0.134	SYNONYMOUS_CODING CG45062
2L	6115373	2L_6115373_SNP [dm3] 2L_6115373_SNP [dm6]	T	C	4.485e^-5	0.134	INTRON stai	TF binding site BDTNP1_TFBS_dl
3R	26373332	3R_26373332_SNP [dm3] 3R_30547610_SNP [dm6]	C	T	4.499e^-5	0.134	INTRON tmod
3R	14655839	3R_14655839_DEL [dm3] 3R_18830117_DEL [dm6]	TAGTAAACAGCTGAAGTTTA...	T	4.501e^-5	0.134	INTRON CG18208
X	20962442	X_20962442_SNP [dm3] X_21091415_SNP [dm6]	A	G	4.510e^-5	0.134	INTERGENIC
X	14760033	X_14760033_SNP [dm3] X_14866000_SNP [dm6]	C	G	4.543e^-5	0.135	UTR_5_PRIME CG9518 INTRON Flo2
2L	3675493	2L_3675493_SNP [dm3] 2L_3675493_SNP [dm6]	A	G	4.544e^-5	0.135	INTRON CG34340
X	19092913	X_19092913_SNP [dm3] X_19198880_SNP [dm6]	G	A	4.560e^-5	0.135	DOWNSTREAM CG7990 INTRON CG7990
3R	13557283	3R_13557283_SNP [dm3] 3R_17731561_SNP [dm6]	T	G	4.568e^-5	0.135	INTRON Lgr1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	5421482	3R_5421482_SNP [dm3] 3R_9595760_SNP [dm6]	T	G	4.589e^-5	0.136	INTRON CG8312	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	2181204	3L_2181204_SNP [dm3] 3L_2181204_SNP [dm6]	G	A	4.595e^-5	0.136	INTERGENIC
3L	21613563	3L_21613563_SNP [dm3] 3L_21620463_SNP [dm6]	A	T	4.596e^-5	0.136	UTR_3_PRIME CG7166 DOWNSTREAM CG11307 & 1 other
2L	10421833	2L_10421833_SNP [dm3] 2L_10421833_SNP [dm6]	G	A	4.639e^-5	0.136	SYNONYMOUS_CODING pie	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	17877833	2L_17877833_SNP [dm3] 2L_17877833_SNP [dm6]	A	C	4.643e^-5	0.136	INTERGENIC
3R	6365953	3R_6365953_SNP [dm3] 3R_10540231_SNP [dm6]	G	A	4.648e^-5	0.136	INTRON hth	TF binding site mE1_TFBS_cad
3L	1408015	3L_1408015_DEL [dm3] 3L_1408015_DEL [dm6]	CAAAGGCCAAAAC...	C	4.655e^-5	0.136	INTRON Ptp61F
2L	17868752	2L_17868752_SNP [dm3] 2L_17868752_SNP [dm6]	T	C	4.658e^-5	0.136	INTRON CadN2
2L	11036304	2L_11036304_DEL [dm3] 2L_11036304_DEL [dm6]	GAAAAGTTACATG...	G	4.659e^-5	0.136	DOWNSTREAM CG18666 INTRON Samuel	TF binding site mE1_TFBS_cad
X	11067509	X_11067509_SNP [dm3] X_11173476_SNP [dm6]	T	A	4.682e^-5	0.137	INTERGENIC
3L	18372279	3L_18372279_SNP [dm3] 3L_18379179_SNP [dm6]	G	A	4.687e^-5	0.137	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr
3L	1604477	3L_1604477_SNP [dm3] 3L_1604477_SNP [dm6]	C	T	4.705e^-5	0.137	SYNONYMOUS_CODING CG18170 START_GAINED CG33791 UTR_5_PRIME CG33791 UPSTREAM CG33791
3R	23115685	3R_23115685_DEL [dm3] 3R_27289963_DEL [dm6]	CT	C	4.729e^-5	0.137	INTRON Hmu	TF binding site mE1_TFBS_cad
2L	8011087	2L_8011087_SNP [dm3] 2L_8011087_SNP [dm6]	C	A	4.731e^-5	0.137	UPSTREAM Tg & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
2R	510350	2R_510350_SNP [dm3] 2R_4622845_SNP [dm6]	A	G	4.735e^-5	0.137	UPSTREAM CR44101 INTERGENIC
2L	11576279	2L_11576279_SNP [dm3] 2L_11576279_SNP [dm6]	G	C	4.741e^-5	0.137	INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	5541729	X_5541729_SNP [dm3] X_5647696_SNP [dm6]	A	T	4.745e^-5	0.137	INTRON CG42492
3R	14588839	3R_14588839_SNP [dm3] 3R_18763117_SNP [dm6]	C	G	4.748e^-5	0.137	INTRON CG7720
X	10341952	X_10341952_SNP [dm3] X_10447919_SNP [dm6]	A	C	4.762e^-5	0.137	INTRON CG32683
2L	15319383	2L_15319383_SNP [dm3] 2L_15319383_SNP [dm6]	T	C	4.766e^-5	0.137	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	10672172	2L_10672172_SNP [dm3] 2L_10672172_SNP [dm6]	T	A	4.777e^-5	0.137	DOWNSTREAM CG31871 INTERGENIC
3R	5866100	3R_5866100_SNP [dm3] 3R_10040378_SNP [dm6]	G	A	4.782e^-5	0.137	INTRON Mical
2L	11442116	2L_11442116_SNP [dm3] 2L_11442116_SNP [dm6]	A	G	4.785e^-5	0.137	INTRON salm	TF binding site mE1_TFBS_inv
2L	5971137	2L_5971137_SNP [dm3] 2L_5971137_SNP [dm6]	T	G	4.802e^-5	0.137	UPSTREAM CR43465 DOWNSTREAM Ucp4B & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2L	14214479	2L_14214479_SNP [dm3] 2L_14214479_SNP [dm6]	A	C	4.822e^-5	0.137	INTRON Dyrk2
3R	2222306	3R_2222306_SNP [dm3] 3R_6396584_SNP [dm6]	A	G	4.832e^-5	0.137	INTRON Dmtn
2L	16815632	2L_16815632_SNP [dm3] 2L_16815632_SNP [dm6]	G	A	4.844e^-5	0.137	NON_SYNONYMOUS_CODING CG13272 INTRON CG13280	TF binding site mE1_TFBS_Kr mE1_TFBS_sens
3L	9729297	3L_9729297_SNP [dm3] 3L_9736197_SNP [dm6]	T	C	4.845e^-5	0.137	INTRON CG42268
3R	2222276	3R_2222276_SNP [dm3] 3R_6396554_SNP [dm6]	A	G	4.867e^-5	0.137	INTRON Dmtn
2L	615853	2L_615853_SNP [dm3] 2L_615853_SNP [dm6]	C	T	4.870e^-5	0.137	INTERGENIC
X	10385194	X_10385194_INS [dm3] X_10491161_INS [dm6]	T	TGGT	4.880e^-5	0.137	INTRON spri
2L	9208245	2L_9208245_SNP [dm3] 2L_9208245_SNP [dm6]	C	T	4.882e^-5	0.137	INTRON tai	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	1103005	2L_1103005_SNP [dm3] 2L_1103005_SNP [dm6]	A	C	4.886e^-5	0.137	UPSTREAM CG4629 DOWNSTREAM mtRNApol INTERGENIC
2L	3718624	2L_3718624_SNP [dm3] 2L_3718624_SNP [dm6]	C	T	4.891e^-5	0.137	UPSTREAM lectin-24A INTRON Shaw
2L	10660634	2L_10660634_SNP [dm3] 2L_10660634_SNP [dm6]	A	G	4.895e^-5	0.137	INTERGENIC
3L	7975130	3L_7975130_SNP [dm3] 3L_7982030_SNP [dm6]	G	A	4.906e^-5	0.137	INTRON nmo	TF binding site BDTNP1_TFBS_dl
2L	9890286	2L_9890286_SNP [dm3] 2L_9890286_SNP [dm6]	T	C	4.906e^-5	0.137	SYNONYMOUS_CODING CG34183 UPSTREAM CG4537 DOWNSTREAM FKBP59 & 1 other	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	18860695	3L_18860695_INS [dm3] 3L_18867595_INS [dm6]	T	TA	4.927e^-5	0.138	UPSTREAM Dysb DOWNSTREAM CG14074 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	3846984	3L_3846984_SNP [dm3] 3L_3846984_SNP [dm6]	T	G	4.949e^-5	0.138	INTRON Awh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv
3L	18482477	3L_18482477_SNP [dm3] 3L_18489377_SNP [dm6]	T	C	4.965e^-5	0.138	INTRON AstC-R2
X	9979189	X_9979189_SNP [dm3] X_10085156_SNP [dm6]	T	G	4.969e^-5	0.138	UTR_3_PRIME CG2974 DOWNSTREAM CG2972
X	15158625	X_15158625_SNP [dm3] X_15264592_SNP [dm6]	C	T	4.970e^-5	0.138	INTERGENIC
2L	5137122	2L_5137122_SNP [dm3] 2L_5137122_SNP [dm6]	G	A	4.987e^-5	0.138	SYNONYMOUS_CODING Msp300 INTRON Msp300
X	6099404	X_6099404_SNP [dm3] X_6205371_SNP [dm6]	C	T	4.993e^-5	0.138	INTERGENIC
2L	3117121	2L_3117121_SNP [dm3] 2L_3117121_SNP [dm6]	G	A	4.999e^-5	0.138	INTRON toc
2L	10137372	2L_10137372_SNP [dm3] 2L_10137372_SNP [dm6]	A	G	5.008e^-5	0.138	START_GAINED CG44153 UTR_5_PRIME CG44153	TF binding site mE1_TFBS_cad
X	21083710	X_21083710_SNP [dm3] X_21212683_SNP [dm6]	G	T	5.010e^-5	0.138	INTRON CG32521
3L	18451474	3L_18451474_SNP [dm3] 3L_18458374_SNP [dm6]	T	G	5.013e^-5	0.138	UPSTREAM CR44671 INTERGENIC
X	12721118	X_12721118_SNP [dm3] X_12827085_SNP [dm6]	T	C	5.031e^-5	0.138	INTRON Pde9
2L	5971104	2L_5971104_SNP [dm3] 2L_5971104_SNP [dm6]	G	C	5.035e^-5	0.138	UPSTREAM CR43465 DOWNSTREAM Ucp4B INTERGENIC	TF binding site mE1_TFBS_cad
3R	810769	3R_810769_SNP [dm3] 3R_4985047_SNP [dm6]	C	T	5.040e^-5	0.138	UPSTREAM CG14662 EXON CR43424	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
3R	22027836	3R_22027836_SNP [dm3] 3R_26202114_SNP [dm6]	A	G	5.060e^-5	0.139	INTRON CR44320
3R	6377929	3R_6377929_SNP [dm3] 3R_10552207_SNP [dm6]	A	C	5.072e^-5	0.139	INTRON hth
2R	7842276	2R_7842276_SNP [dm3] 2R_11954771_SNP [dm6]	C	G	5.079e^-5	0.139	INTRON CG13188
3L	11556631	3L_11556631_INS [dm3] 3L_11563531_INS [dm6]	G	GTCCT	5.089e^-5	0.139	UTR_3_PRIME CG7394 UPSTREAM CG33267 DOWNSTREAM CG7394
3R	12643375	3R_12643375_DEL [dm3] 3R_16817653_DEL [dm6]	ACGA	A	5.102e^-5	0.139	INTRON abd-A	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	5193273	2L_5193273_SNP [dm3] 2L_5193273_SNP [dm6]	A	C	5.105e^-5	0.139	SYNONYMOUS_CODING Msp300 UPSTREAM snmRNA:765	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	5138784	2L_5138784_SNP [dm3] 2L_5138784_SNP [dm6]	T	C	5.114e^-5	0.139	SYNONYMOUS_CODING Msp300 INTRON Msp300
2L	6115377	2L_6115377_SNP [dm3] 2L_6115377_SNP [dm6]	T	A	5.129e^-5	0.139	INTRON stai	TF binding site BDTNP1_TFBS_dl
3L	16268365	3L_16268365_SNP [dm3] 3L_16275265_SNP [dm6]	C	T	5.147e^-5	0.139	INTERGENIC
X	1810299	X_1810299_SNP [dm3] X_1916266_SNP [dm6]	C	T	5.150e^-5	0.139	UTR_3_PRIME Rbcn-3B DOWNSTREAM Rbcn-3B INTRON mip130
2L	5156295	2L_5156295_SNP [dm3] 2L_5156295_SNP [dm6]	G	T	5.160e^-5	0.139	INTRON Msp300
2L	14291215	2L_14291215_SNP [dm3] 2L_14291215_SNP [dm6]	T	G	5.161e^-5	0.139	INTRON wb EXON CR43639
2R	19138691	2R_19138691_SNP [dm3] 2R_23251168_SNP [dm6]	A	G	5.204e^-5	0.14	INTERGENIC
3R	24105625	3R_24105625_SNP [dm3] 3R_28279903_SNP [dm6]	A	T	5.209e^-5	0.14	INTERGENIC
2L	12841291	2L_12841291_SNP [dm3] 2L_12841291_SNP [dm6]	A	T	5.210e^-5	0.14	UPSTREAM CR44971 EXON CR44970
2R	6641276	2R_6641276_SNP [dm3] 2R_10753771_SNP [dm6]	G	A	5.233e^-5	0.14	INTRON CG33144
3L	16550997	3L_16550997_SNP [dm3] 3L_16557897_SNP [dm6]	T	C	5.240e^-5	0.14	UTR_3_PRIME CG4229	TF binding site mE1_TFBS_cad
3R	2143849	3R_2143849_SNP [dm3] 3R_6318127_SNP [dm6]	T	A	5.258e^-5	0.14	INTRON Osi17
2L	11591333	2L_11591333_SNP [dm3] 2L_11591333_SNP [dm6]	G	A	5.269e^-5	0.14	DOWNSTREAM Acp33A INTRON kek2
3R	7496743	3R_7496743_SNP [dm3] 3R_11671021_SNP [dm6]	A	G	5.269e^-5	0.14	INTRON CG42327
2L	672946	2L_672946_SNP [dm3] 2L_672946_SNP [dm6]	C	T	5.295e^-5	0.14	INTRON ds
X	16415978	X_16415978_SNP [dm3] X_16521945_SNP [dm6]	T	G	5.296e^-5	0.14	INTRON para
3R	13510796	3R_13510796_SNP [dm3] 3R_17685074_SNP [dm6]	A	C	5.297e^-5	0.14	UPSTREAM CG31360 & 1 other DOWNSTREAM CG31249 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	14717581	2L_14717581_SNP [dm3] 2L_14717581_SNP [dm6]	C	T	5.298e^-5	0.14	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	18673531	2L_18673531_SNP [dm3] 2L_18673531_SNP [dm6]	A	T	5.302e^-5	0.14	NON_SYNONYMOUS_CODING Mst36Fb UPSTREAM CG43339
2L	5544026	2L_5544026_SNP [dm3] 2L_5544026_SNP [dm6]	C	A	5.314e^-5	0.14	INTRON Lam	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	18480440	3L_18480440_INS [dm3] 3L_18487340_INS [dm6]	A	ACTTACGAAAGGAAAAAA...	5.329e^-5	0.141	INTRON AstC-R2
3L	18391750	3L_18391750_DEL [dm3] 3L_18398650_DEL [dm6]	GG	G	5.364e^-5	0.141	UPSTREAM rpr INTERGENIC	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
3L	4109894	3L_4109894_SNP [dm3] 3L_4109894_SNP [dm6]	G	C	5.370e^-5	0.141	INTRON Ack	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6124792	2L_6124792_SNP [dm3] 2L_6124792_SNP [dm6]	A	G	5.386e^-5	0.141	UPSTREAM Arpc4 DOWNSTREAM stai INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Kr
3R	961082	3R_961082_SNP [dm3] 3R_5135360_SNP [dm6]	G	A	5.403e^-5	0.142	INTERGENIC
2L	16830053	2L_16830053_SNP [dm3] 2L_16830053_SNP [dm6]	G	C	5.422e^-5	0.142	NON_SYNONYMOUS_CODING CG31739	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	1103016	2L_1103016_SNP [dm3] 2L_1103016_SNP [dm6]	G	A	5.437e^-5	0.142	UPSTREAM CG4629 DOWNSTREAM mtRNApol INTERGENIC
3R	5817267	3R_5817267_SNP [dm3] 3R_9991545_SNP [dm6]	T	C	5.439e^-5	0.142	UTR_3_PRIME Glut4EF
3R	5817268	3R_5817268_SNP [dm3] 3R_9991546_SNP [dm6]	A	T	5.439e^-5	0.142	UTR_3_PRIME Glut4EF
3L	18860678	3L_18860678_SNP [dm3] 3L_18867578_SNP [dm6]	C	A	5.443e^-5	0.142	UPSTREAM Dysb DOWNSTREAM CG14074 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	10401923	X_10401923_SNP [dm3] X_10507890_SNP [dm6]	C	A	5.459e^-5	0.142	INTRON spri
X	19317141	X_19317141_SNP [dm3] X_19423108_SNP [dm6]	T	C	5.489e^-5	0.143	INTRON kek5
2R	15091927	2R_15091927_SNP [dm3] 2R_19204422_SNP [dm6]	T	G	5.516e^-5	0.143	INTRON hppy
2L	615855	2L_615855_SNP [dm3] 2L_615855_SNP [dm6]	T	A	5.520e^-5	0.143	INTERGENIC
3R	2222288	3R_2222288_SNP [dm3] 3R_6396566_SNP [dm6]	C	G	5.527e^-5	0.143	INTRON Dmtn
3L	1610523	3L_1610523_DEL [dm3] 3L_1610523_DEL [dm6]	TCATTCATCGGATT...	T	5.539e^-5	0.143	DOWNSTREAM CG12105 INTRON CG33791 & 1 other
2L	5971096	2L_5971096_SNP [dm3] 2L_5971096_SNP [dm6]	A	G	5.542e^-5	0.143	UPSTREAM CR43465 DOWNSTREAM Ucp4B INTERGENIC	TF binding site mE1_TFBS_cad
2L	10672161	2L_10672161_SNP [dm3] 2L_10672161_SNP [dm6]	T	A	5.544e^-5	0.143	DOWNSTREAM CG31871 INTERGENIC
3L	18449601	3L_18449601_SNP [dm3] 3L_18456501_SNP [dm6]	C	T	5.559e^-5	0.143	DOWNSTREAM CR44671 EXON CR44670
3L	12650543	3L_12650543_SNP [dm3] 3L_12657443_SNP [dm6]	C	G	5.567e^-5	0.143	INTERGENIC
3R	6356492	3R_6356492_SNP [dm3] 3R_10530770_SNP [dm6]	A	C	5.617e^-5	0.144	INTRON hth
2L	5141627	2L_5141627_SNP [dm3] 2L_5141627_SNP [dm6]	T	A	5.623e^-5	0.144	INTRON Msp300
3L	12060748	3L_12060748_SNP [dm3] 3L_12067648_SNP [dm6]	T	A	5.633e^-5	0.144	UTR_3_PRIME Sema-5c	TF binding site mE1_TFBS_HSA
X	6099256	X_6099256_DEL [dm3] X_6205223_DEL [dm6]	TT	T	5.660e^-5	0.144	INTERGENIC
2L	419636	2L_419636_SNP [dm3] 2L_419636_SNP [dm6]	C	G	5.661e^-5	0.144	UTR_5_PRIME CG13690 UPSTREAM RpLP1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	10504088	3R_10504088_SNP [dm3] 3R_14678366_SNP [dm6]	C	T	5.682e^-5	0.145	INTRON Meltrin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	18673570	2L_18673570_SNP [dm3] 2L_18673570_SNP [dm6]	T	A	5.683e^-5	0.145	NON_SYNONYMOUS_CODING Mst36Fb UPSTREAM CG43339
3L	3142275	3L_3142275_SNP [dm3] 3L_3142275_SNP [dm6]	T	A	5.708e^-5	0.145	INTRON CG11537	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	10828090	X_10828090_SNP [dm3] X_10934057_SNP [dm6]	C	T	5.725e^-5	0.145	INTRON Myo10A
3R	13557293	3R_13557293_SNP [dm3] 3R_17731571_SNP [dm6]	C	T	5.733e^-5	0.145	INTRON Lgr1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	14537178	2L_14537178_SNP [dm3] 2L_14537178_SNP [dm6]	A	G	5.743e^-5	0.145	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Ubx
2L	14282365	2L_14282365_SNP [dm3] 2L_14282365_SNP [dm6]	C	T	5.744e^-5	0.145	INTRON wb
X	19461860	X_19461860_DEL [dm3] X_19567827_DEL [dm6]	TATATAGT	T	5.759e^-5	0.145	INTRON car
X	13284017	X_13284017_SNP [dm3] X_13389984_SNP [dm6]	T	C	5.783e^-5	0.145	DOWNSTREAM CR44620 & 1 other INTERGENIC
3L	21583931	3L_21583931_SNP [dm3] 3L_21590831_SNP [dm6]	G	C	5.799e^-5	0.145	INTRON TfAP-2
3R	26373565	3R_26373565_SNP [dm3] 3R_30547843_SNP [dm6]	G	A	5.815e^-5	0.145	INTRON tmod
X	18654708	X_18654708_SNP [dm3] X_18760675_SNP [dm6]	C	T	5.819e^-5	0.145	INTERGENIC
X	12173912	X_12173912_SNP [dm3] X_12279879_SNP [dm6]	G	A	5.819e^-5	0.145	INTRON Ten-a
3L	18449648	3L_18449648_SNP [dm3] 3L_18456548_SNP [dm6]	T	C	5.826e^-5	0.145	DOWNSTREAM CR44671 EXON CR44670
3R	6366541	3R_6366541_SNP [dm3] 3R_10540819_SNP [dm6]	A	T	5.829e^-5	0.145	INTRON hth
3R	16104869	3R_16104869_SNP [dm3] 3R_20279147_SNP [dm6]	A	T	5.832e^-5	0.145	INTRON cic
2L	12823818	2L_12823818_SNP [dm3] 2L_12823818_SNP [dm6]	A	T	5.835e^-5	0.145	INTERGENIC
2L	8885531	2L_8885531_SNP [dm3] 2L_8885531_SNP [dm6]	T	C	5.858e^-5	0.145	INTERGENIC
2L	13640604	2L_13640604_SNP [dm3] 2L_13640604_SNP [dm6]	T	C	5.884e^-5	0.145	INTRON ics	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	13640607	2L_13640607_SNP [dm3] 2L_13640607_SNP [dm6]	A	G	5.884e^-5	0.145	INTRON ics	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	13640608	2L_13640608_SNP [dm3] 2L_13640608_SNP [dm6]	T	A	5.884e^-5	0.145	INTRON ics	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	13928655	2L_13928655_SNP [dm3] 2L_13928655_SNP [dm6]	A	G	5.888e^-5	0.145	INTRON Ance-3
3L	2115086	3L_2115086_SNP [dm3] 3L_2115086_SNP [dm6]	C	A	5.911e^-5	0.145	INTRON sls
3R	14361731	3R_14361731_SNP [dm3] 3R_18536009_SNP [dm6]	A	T	5.918e^-5	0.145	INTRON fru
2L	5074858	2L_5074858_DEL [dm3] 2L_5074858_DEL [dm6]	AA	A	5.921e^-5	0.145	INTRON pgant5
2R	7839090	2R_7839090_SNP [dm3] 2R_11951585_SNP [dm6]	C	T	5.924e^-5	0.145	INTRON CG13188
2L	18677596	2L_18677596_SNP [dm3] 2L_18677596_SNP [dm6]	A	C	5.930e^-5	0.145	UPSTREAM Mst36Fa INTRON CG31751	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2R	3807712	2R_3807712_SNP [dm3] 2R_7920207_SNP [dm6]	C	T	5.931e^-5	0.145	SYNONYMOUS_CODING Cul1 DOWNSTREAM Or43b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	13327470	X_13327470_SNP [dm3] X_13433437_SNP [dm6]	G	A	5.932e^-5	0.145	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	1663233	2L_1663233_DEL [dm3] 2L_1663233_DEL [dm6]	TC	T	5.932e^-5	0.145	INTRON chinmo	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	25660673	3R_25660673_SNP [dm3] 3R_29834951_SNP [dm6]	C	A	5.940e^-5	0.145	UTR_5_PRIME Atg16 UPSTREAM CG15510 DOWNSTREAM CG42592	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3R	4815832	3R_4815832_SNP [dm3] 3R_8990110_SNP [dm6]	G	A	5.941e^-5	0.145	SYNONYMOUS_CODING CG11970 DOWNSTREAM E_var_3-9
3L	18478885	3L_18478885_SNP [dm3] 3L_18485785_SNP [dm6]	C	T	5.943e^-5	0.145	UTR_3_PRIME AstC-R2 DOWNSTREAM AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
3R	6359917	3R_6359917_SNP [dm3] 3R_10534195_SNP [dm6]	G	A	5.945e^-5	0.145	INTRON hth
3R	6363132	3R_6363132_SNP [dm3] 3R_10537410_SNP [dm6]	C	G	5.945e^-5	0.145	INTRON hth	enhancer mE1_CBP_Enhancers
3R	6367782	3R_6367782_SNP [dm3] 3R_10542060_SNP [dm6]	C	G	5.945e^-5	0.145	INTRON hth	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	11937473	X_11937473_SNP [dm3] X_12043440_SNP [dm6]	T	C	5.995e^-5	0.146	UPSTREAM CR43960 & 1 other INTERGENIC
2R	4758653	2R_4758653_SNP [dm3] 2R_8871148_SNP [dm6]	A	G	6.019e^-5	0.146	INTRON RyR
3L	18482078	3L_18482078_SNP [dm3] 3L_18488978_SNP [dm6]	C	T	6.024e^-5	0.146	INTRON AstC-R2	TF binding site mE1_TFBS_cad
2L	2686790	2L_2686790_SNP [dm3] 2L_2686790_SNP [dm6]	T	A	6.046e^-5	0.146	INTRON CG31690
3R	17852770	3R_17852770_SNP [dm3] 3R_22027048_SNP [dm6]	G	T	6.058e^-5	0.146	UTR_5_PRIME Cchl UPSTREAM ND42	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	9591086	X_9591086_SNP [dm3] X_9697053_SNP [dm6]	C	T	6.059e^-5	0.146	UTR_3_PRIME btd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	4639374	2R_4639374_SNP [dm3] 2R_8751869_SNP [dm6]	C	T	6.068e^-5	0.146	INTRON CG8740	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_cnc
3L	3163695	3L_3163695_SNP [dm3] 3L_3163695_SNP [dm6]	T	A	6.091e^-5	0.147	SYNONYMOUS_CODING rasp DOWNSTREAM Asciz	TF binding site BDTNP1_TFBS_twi
2L	14214480	2L_14214480_SNP [dm3] 2L_14214480_SNP [dm6]	A	T	6.097e^-5	0.147	INTRON Dyrk2
3R	20413769	3R_20413769_SNP [dm3] 3R_24588047_SNP [dm6]	T	A	6.115e^-5	0.147	INTRON mld	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	15843707	3L_15843707_SNP [dm3] 3L_15850607_SNP [dm6]	G	C	6.117e^-5	0.147	UTR_3_PRIME pHCl DOWNSTREAM pHCl
3R	2222292	3R_2222292_SNP [dm3] 3R_6396570_SNP [dm6]	C	A	6.133e^-5	0.147	INTRON Dmtn
2L	5542833	2L_5542833_SNP [dm3] 2L_5542833_SNP [dm6]	C	A	6.144e^-5	0.147	UTR_5_PRIME Lam UPSTREAM Hel25E & 1 other INTRON Lam	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2L	3436550	2L_3436550_SNP [dm3] 2L_3436550_SNP [dm6]	T	C	6.152e^-5	0.147	INTERGENIC
X	10272657	X_10272657_SNP [dm3] X_10378624_SNP [dm6]	A	G	6.164e^-5	0.147	NON_SYNONYMOUS_CODING CG32681 INTRON CG17841
X	16415944	X_16415944_INS [dm3] X_16521911_INS [dm6]	TG	ACTAGA	6.170e^-5	0.147	INTRON para
X	7480202	X_7480202_SNP [dm3] X_7586169_SNP [dm6]	A	G	6.177e^-5	0.147	UPSTREAM CG12689 INTERGENIC	regulatory region REDfly_CRMs
3L	15504913	3L_15504913_SNP [dm3] 3L_15511813_SNP [dm6]	A	C	6.187e^-5	0.147	UPSTREAM Eip71CD DOWNSTREAM gdl-ORF39 & 1 other INTRON Eip71CD	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	12665636	2L_12665636_SNP [dm3] 2L_12665636_SNP [dm6]	C	G	6.189e^-5	0.147	INTRON pdm2	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	10482414	X_10482414_SNP [dm3] X_10588381_SNP [dm6]	C	A	6.206e^-5	0.147	UPSTREAM Rab9D INTERGENIC
3R	14361728	3R_14361728_SNP [dm3] 3R_18536006_SNP [dm6]	C	T	6.219e^-5	0.147	INTRON fru
3L	18478419	3L_18478419_SNP [dm3] 3L_18485319_SNP [dm6]	C	T	6.223e^-5	0.147	UTR_3_PRIME AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
X	9410132	X_9410132_SNP [dm3] X_9516099_SNP [dm6]	G	T	6.235e^-5	0.147	INTRON CG32700
3L	13248545	3L_13248545_SNP [dm3] 3L_13255445_SNP [dm6]	C	T	6.265e^-5	0.148	INTRON caps
3L	18650442	3L_18650442_SNP [dm3] 3L_18657342_SNP [dm6]	G	A	6.270e^-5	0.148	INTRON MYPT-75D
3L	18386985	3L_18386985_SNP [dm3] 3L_18393885_SNP [dm6]	G	C	6.280e^-5	0.148	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	10481967	X_10481967_SNP [dm3] X_10587934_SNP [dm6]	A	T	6.282e^-5	0.148	INTERGENIC
2L	5542884	2L_5542884_SNP [dm3] 2L_5542884_SNP [dm6]	A	T	6.295e^-5	0.148	UTR_5_PRIME Lam UPSTREAM Hel25E & 1 other INTRON Lam	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
X	15479466	X_15479466_SNP [dm3] X_15585433_SNP [dm6]	A	G	6.351e^-5	0.148	UTR_3_PRIME CG9220 DOWNSTREAM CG8097
X	12815975	X_12815975_SNP [dm3] X_12921942_SNP [dm6]	A	G	6.356e^-5	0.148	INTRON fne
3L	24082280	3L_24082280_SNP [dm3] 3L_24089180_SNP [dm6]	C	T	6.357e^-5	0.148	INTRON Snap25
2L	11917641	2L_11917641_SNP [dm3] 2L_11917641_SNP [dm6]	G	A	6.366e^-5	0.148	INTRON Pde1c
X	6103463	X_6103463_SNP [dm3] X_6209430_SNP [dm6]	G	T	6.374e^-5	0.148	INTERGENIC
X	6103478	X_6103478_SNP [dm3] X_6209445_SNP [dm6]	G	A	6.374e^-5	0.148	INTERGENIC
X	6103482	X_6103482_SNP [dm3] X_6209449_SNP [dm6]	G	A	6.374e^-5	0.148	INTERGENIC
3R	14594029	3R_14594029_INS [dm3] 3R_18768307_INS [dm6]	C	TGCA	6.375e^-5	0.148	INTRON CG7720
3R	14588848	3R_14588848_SNP [dm3] 3R_18763126_SNP [dm6]	T	C	6.390e^-5	0.148	INTRON CG7720
X	11464438	X_11464438_SNP [dm3] X_11570405_SNP [dm6]	T	A	6.390e^-5	0.148	UPSTREAM CG11699 & 1 other DOWNSTREAM CR44266 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	11238168	X_11238168_SNP [dm3] X_11344135_SNP [dm6]	G	A	6.409e^-5	0.148	UTR_3_PRIME CG34348 DOWNSTREAM CG1597	TF binding site mE1_TFBS_sens
2R	10191885	2R_10191885_SNP [dm3] 2R_14304380_SNP [dm6]	T	C	6.421e^-5	0.148	INTERGENIC
X	16053754	X_16053754_SNP [dm3] X_16159721_SNP [dm6]	C	T	6.432e^-5	0.149	INTERGENIC	TF binding site mE1_TFBS_HSA
X	10828124	X_10828124_SNP [dm3] X_10934091_SNP [dm6]	T	C	6.510e^-5	0.15	INTRON Myo10A
3L	4060898	3L_4060898_SNP [dm3] 3L_4060898_SNP [dm6]	A	G	6.515e^-5	0.15	NON_SYNONYMOUS_CODING CG18869
2L	5446670	2L_5446670_SNP [dm3] 2L_5446670_SNP [dm6]	C	T	6.553e^-5	0.151	INTERGENIC
X	12625212	X_12625212_SNP [dm3] X_12731179_SNP [dm6]	T	C	6.570e^-5	0.151	SYNONYMOUS_CODING Smr UPSTREAM CR43963
3R	19529649	3R_19529649_SNP [dm3] 3R_23703927_SNP [dm6]	C	T	6.571e^-5	0.151	SYNONYMOUS_CODING CG31413 UPSTREAM CG31414
2L	15349755	2L_15349755_SNP [dm3] 2L_15349755_SNP [dm6]	A	C	6.577e^-5	0.151	INTERGENIC
3L	4131218	3L_4131218_SNP [dm3] 3L_4131218_SNP [dm6]	G	A	6.608e^-5	0.151	SYNONYMOUS_CODING ens
2L	15319483	2L_15319483_SNP [dm3] 2L_15319483_SNP [dm6]	C	G	6.608e^-5	0.151	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5155271	2L_5155271_SNP [dm3] 2L_5155271_SNP [dm6]	T	A	6.609e^-5	0.151	INTRON Msp300	TF binding site mE1_TFBS_cad
3L	15505091	3L_15505091_SNP [dm3] 3L_15511991_SNP [dm6]	C	T	6.625e^-5	0.151	START_GAINED Eip71CD UTR_5_PRIME Eip71CD DOWNSTREAM gdl INTRON Eip71CD	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	11449506	2L_11449506_SNP [dm3] 2L_11449506_SNP [dm6]	T	C	6.628e^-5	0.151	INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	18858891	3L_18858891_SNP [dm3] 3L_18865791_SNP [dm6]	G	C	6.647e^-5	0.151	UPSTREAM CG14074 DOWNSTREAM CG6865 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_Dll mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
X	16384572	X_16384572_SNP [dm3] X_16490539_SNP [dm6]	G	A	6.662e^-5	0.151	INTRON para
2L	976015	2L_976015_SNP [dm3] 2L_976015_SNP [dm6]	G	T	6.675e^-5	0.151	INTERGENIC	TF binding site BDTNP1_TFBS_hb
3L	18449758	3L_18449758_SNP [dm3] 3L_18456658_SNP [dm6]	T	A	6.675e^-5	0.151	DOWNSTREAM CR44671 EXON CR44670
3R	6374113	3R_6374113_SNP [dm3] 3R_10548391_SNP [dm6]	C	T	6.701e^-5	0.152	INTRON hth
X	15169334	X_15169334_SNP [dm3] X_15275301_SNP [dm6]	A	G	6.705e^-5	0.152	INTERGENIC
3L	22946291	3L_22946291_SNP [dm3] 3L_22953191_SNP [dm6]	A	G	6.711e^-5	0.152	DOWNSTREAM Mes2 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	5144680	2L_5144680_SNP [dm3] 2L_5144680_SNP [dm6]	C	A	6.722e^-5	0.152	SYNONYMOUS_CODING Msp300	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	14588846	3R_14588846_SNP [dm3] 3R_18763124_SNP [dm6]	G	T	6.752e^-5	0.152	INTRON CG7720
2L	9865700	2L_9865700_SNP [dm3] 2L_9865700_SNP [dm6]	G	A	6.759e^-5	0.152	INTRON nAChRalpha6
2L	5630617	2L_5630617_SNP [dm3] 2L_5630617_SNP [dm6]	T	C	6.763e^-5	0.152	INTRON CG31646	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2R	319166	2R_319166_SNP [dm3] 2R_4431661_SNP [dm6]	T	C	6.770e^-5	0.152	INTRON Gprk1
X	10272651	X_10272651_SNP [dm3] X_10378618_SNP [dm6]	A	G	6.777e^-5	0.152	NON_SYNONYMOUS_CODING CG32681 INTRON CG17841
3R	6053866	3R_6053866_SNP [dm3] 3R_10228144_SNP [dm6]	G	A	6.777e^-5	0.152	INTRON CG42795
2L	14452348	2L_14452348_SNP [dm3] 2L_14452348_SNP [dm6]	C	T	6.785e^-5	0.152	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	9596911	X_9596911_SNP [dm3] X_9702878_SNP [dm6]	T	C	6.793e^-5	0.152	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2L	16825521	2L_16825521_SNP [dm3] 2L_16825521_SNP [dm6]	G	A	6.820e^-5	0.152	SPLICE_SITE_REGION mdy UPSTREAM Cas INTRON mdy	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	3094279	2L_3094279_SNP [dm3] 2L_3094279_SNP [dm6]	T	G	6.821e^-5	0.152	NON_SYNONYMOUS_CODING toc INTRON toc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
2L	5138547	2L_5138547_SNP [dm3] 2L_5138547_SNP [dm6]	G	T	6.829e^-5	0.152	SYNONYMOUS_CODING Msp300 INTRON Msp300
X	8988415	X_8988415_SNP [dm3] X_9094382_SNP [dm6]	G	A	6.833e^-5	0.152	INTRON CG7766	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
3R	24105586	3R_24105586_SNP [dm3] 3R_28279864_SNP [dm6]	T	G	6.856e^-5	0.152	INTERGENIC
X	8336159	X_8336159_SNP [dm3] X_8442126_SNP [dm6]	C	T	6.885e^-5	0.153	UTR_5_PRIME CG12123 DOWNSTREAM CG1440
X	10269734	X_10269734_SNP [dm3] X_10375701_SNP [dm6]	G	T	6.905e^-5	0.153	SYNONYMOUS_CODING CG2898 UPSTREAM CG32686 DOWNSTREAM CG32681 INTRON CG17841	TF binding site mE1_TFBS_chinmo
3L	18471326	3L_18471326_SNP [dm3] 3L_18478226_SNP [dm6]	C	T	6.906e^-5	0.153	UPSTREAM CR44673 INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3R	6374578	3R_6374578_SNP [dm3] 3R_10548856_SNP [dm6]	A	C	6.917e^-5	0.153	INTRON hth
3R	23852615	3R_23852615_SNP [dm3] 3R_28026893_SNP [dm6]	C	T	6.943e^-5	0.153	INTRON CG34362
2L	3436570	2L_3436570_MNP [dm3] 2L_3436570_MNP [dm6]	TTA	CAT	6.965e^-5	0.154	INTERGENIC
2L	15276638	2L_15276638_SNP [dm3] 2L_15276638_SNP [dm6]	A	C	6.972e^-5	0.154	INTERGENIC
3L	16889114	3L_16889114_SNP [dm3] 3L_16896014_SNP [dm6]	T	G	7.002e^-5	0.154	INTRON Lmpt
2L	5138299	2L_5138299_SNP [dm3] 2L_5138299_SNP [dm6]	A	G	7.022e^-5	0.154	NON_SYNONYMOUS_CODING Msp300 INTRON Msp300
2L	5138310	2L_5138310_SNP [dm3] 2L_5138310_SNP [dm6]	G	A	7.022e^-5	0.154	SYNONYMOUS_CODING Msp300 INTRON Msp300
3L	22936482	3L_22936482_SNP [dm3] 3L_22943382_SNP [dm6]	C	G	7.035e^-5	0.154	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	19158783	X_19158783_SNP [dm3] X_19264750_SNP [dm6]	A	G	7.040e^-5	0.154	NON_SYNONYMOUS_CODING Vav INTRON Vav	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	10341936	X_10341936_SNP [dm3] X_10447903_SNP [dm6]	T	C	7.053e^-5	0.154	INTRON CG32683
3R	17803891	3R_17803891_SNP [dm3] 3R_21978169_SNP [dm6]	C	T	7.070e^-5	0.154	INTRON Eip93F
2L	14553628	2L_14553628_SNP [dm3] 2L_14553628_SNP [dm6]	C	T	7.075e^-5	0.154	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
2L	16831344	2L_16831344_SNP [dm3] 2L_16831344_SNP [dm6]	C	T	7.085e^-5	0.154	NON_SYNONYMOUS_CODING CG31739 DOWNSTREAM CG13282	TF binding site mE1_TFBS_cad
X	3437539	X_3437539_SNP [dm3] X_3543506_SNP [dm6]	G	A	7.088e^-5	0.154	INTRON CG32791
2R	12602331	2R_12602331_SNP [dm3] 2R_16714826_SNP [dm6]	A	C	7.132e^-5	0.155	INTRON CG30463
2R	6767731	2R_6767731_SNP [dm3] 2R_10880226_SNP [dm6]	T	A	7.132e^-5	0.155	UTR_5_PRIME Pex6 UPSTREAM Taf5 INTRON Pex6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_ttk
2R	6769708	2R_6769708_SNP [dm3] 2R_10882203_SNP [dm6]	C	T	7.132e^-5	0.155	SYNONYMOUS_CODING Pex6	TF binding site mE1_TFBS_sens
2L	3436563	2L_3436563_INS [dm3] 2L_3436563_INS [dm6]	A	ATATGC	7.144e^-5	0.155	INTERGENIC
3L	18448104	3L_18448104_SNP [dm3] 3L_18455004_SNP [dm6]	T	C	7.188e^-5	0.156	INTERGENIC
2L	17882573	2L_17882573_SNP [dm3] 2L_17882573_SNP [dm6]	T	C	7.193e^-5	0.156	INTERGENIC
3R	5140182	3R_5140182_SNP [dm3] 3R_9314460_SNP [dm6]	G	T	7.221e^-5	0.156	INTRON CG8861
3L	8606061	3L_8606061_SNP [dm3] 3L_8612961_SNP [dm6]	C	T	7.225e^-5	0.156	INTRON CG6282
3L	18453603	3L_18453603_SNP [dm3] 3L_18460503_SNP [dm6]	A	T	7.226e^-5	0.156	INTRON CG32196	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	8885676	2L_8885676_SNP [dm3] 2L_8885676_SNP [dm6]	C	T	7.235e^-5	0.156	INTERGENIC
3R	7224260	3R_7224260_SNP [dm3] 3R_11398538_SNP [dm6]	C	A	7.250e^-5	0.156	UTR_3_PRIME pros
2L	5139329	2L_5139329_SNP [dm3] 2L_5139329_SNP [dm6]	T	C	7.254e^-5	0.156	INTRON Msp300
3R	4851798	3R_4851798_SNP [dm3] 3R_9026076_SNP [dm6]	A	G	7.261e^-5	0.156	INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	13140901	X_13140901_SNP [dm3] X_13246868_SNP [dm6]	T	G	7.262e^-5	0.156	INTRON mew	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_inv
3L	1848071	3L_1848071_SNP [dm3] 3L_1848071_SNP [dm6]	G	A	7.269e^-5	0.156	INTERGENIC
3L	15866557	3L_15866557_SNP [dm3] 3L_15873457_SNP [dm6]	A	G	7.324e^-5	0.157	INTRON pHCl
3L	15506804	3L_15506804_SNP [dm3] 3L_15513704_SNP [dm6]	C	T	7.337e^-5	0.157	DOWNSTREAM Eip71CD INTERGENIC	regulatory region REDfly_CRMs
2L	13908114	2L_13908114_SNP [dm3] 2L_13908114_SNP [dm6]	C	T	7.395e^-5	0.158	SYNONYMOUS_CODING Ance	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	8463333	3L_8463333_SNP [dm3] 3L_8470233_SNP [dm6]	A	G	7.414e^-5	0.158	INTRON Gug
3R	15176947	3R_15176947_SNP [dm3] 3R_19351225_SNP [dm6]	A	G	7.428e^-5	0.158	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	2704955	X_2704955_SNP [dm3] X_2810922_SNP [dm6]	C	A	7.442e^-5	0.158	DOWNSTREAM CG12498 INTRON kirre
2L	6102905	2L_6102905_DEL [dm3] 2L_6102905_DEL [dm6]	CACC	C	7.444e^-5	0.158	INTRON stai
2L	17868587	2L_17868587_SNP [dm3] 2L_17868587_SNP [dm6]	G	A	7.448e^-5	0.158	INTRON CadN2
3L	15503434	3L_15503434_SNP [dm3] 3L_15510334_SNP [dm6]	A	G	7.449e^-5	0.158	UPSTREAM Eip71CD DOWNSTREAM Z600 INTRON gdl-ORF39 & 1 other	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
X	6099314	X_6099314_SNP [dm3] X_6205281_SNP [dm6]	A	T	7.452e^-5	0.158	INTERGENIC
2L	4899196	2L_4899196_SNP [dm3] 2L_4899196_SNP [dm6]	G	T	7.469e^-5	0.158	INTRON CG3036
2L	12647827	2L_12647827_SNP [dm3] 2L_12647827_SNP [dm6]	C	A	7.494e^-5	0.158	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	14553241	2L_14553241_SNP [dm3] 2L_14553241_SNP [dm6]	C	T	7.496e^-5	0.158	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad
3L	18430368	3L_18430368_SNP [dm3] 3L_18437268_SNP [dm6]	T	A	7.497e^-5	0.158	INTERGENIC	TF binding site mE1_TFBS_Kr
2L	12183890	2L_12183890_DEL [dm3] 2L_12183890_DEL [dm6]	AAAACCACTTATTTCATTTA...	A	7.504e^-5	0.158	INTRON aret
2R	13098920	2R_13098920_SNP [dm3] 2R_17211415_SNP [dm6]	A	C	7.509e^-5	0.158	INTERGENIC
3L	8841870	3L_8841870_DEL [dm3] 3L_8848770_DEL [dm6]	CAT	C	7.511e^-5	0.158	INTRON dally	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	5082595	2L_5082595_SNP [dm3] 2L_5082595_SNP [dm6]	T	C	7.514e^-5	0.158	INTRON pgant5
X	16415957	X_16415957_SNP [dm3] X_16521924_SNP [dm6]	T	G	7.541e^-5	0.158	INTRON para
3L	2680681	3L_2680681_SNP [dm3] 3L_2680681_SNP [dm6]	C	G	7.543e^-5	0.158	INTRON Fife
2L	4761617	2L_4761617_SNP [dm3] 2L_4761617_SNP [dm6]	C	T	7.551e^-5	0.158	INTRON CG15630
2L	12175948	2L_12175948_DEL [dm3] 2L_12175948_DEL [dm6]	TTTATTATCTAA...	T	7.558e^-5	0.158	INTRON aret & 1 other	TF binding site mE1_TFBS_HSA
2L	6102794	2L_6102794_SNP [dm3] 2L_6102794_SNP [dm6]	T	C	7.561e^-5	0.158	INTRON stai
2L	4234697	2L_4234697_SNP [dm3] 2L_4234697_SNP [dm6]	A	T	7.597e^-5	0.158	INTERGENIC
3R	1454499	3R_1454499_SNP [dm3] 3R_5628777_SNP [dm6]	A	G	7.623e^-5	0.159	NON_SYNONYMOUS_CODING CG31551	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
3L	15504633	3L_15504633_SNP [dm3] 3L_15511533_SNP [dm6]	G	T	7.641e^-5	0.159	UPSTREAM Eip71CD DOWNSTREAM gdl-ORF39 & 1 other INTRON Eip71CD	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	10440823	X_10440823_SNP [dm3] X_10546790_SNP [dm6]	A	G	7.653e^-5	0.159	UPSTREAM spri INTRON spri	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	10441001	X_10441001_SNP [dm3] X_10546968_SNP [dm6]	G	A	7.653e^-5	0.159	UPSTREAM spri INTRON spri	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	3424000	X_3424000_SNP [dm3] X_3529967_SNP [dm6]	T	C	7.654e^-5	0.159	INTRON CG32791
2L	3436602	2L_3436602_INS [dm3] 2L_3436602_INS [dm6]	A	AGTTTAT	7.692e^-5	0.159	INTERGENIC
2L	3436607	2L_3436607_DEL [dm3] 2L_3436607_DEL [dm6]	AA	T	7.692e^-5	0.159	INTERGENIC
3L	6979672	3L_6979672_SNP [dm3] 3L_6986572_SNP [dm6]	T	G	7.724e^-5	0.159	INTERGENIC
2L	10698332	2L_10698332_SNP [dm3] 2L_10698332_SNP [dm6]	C	A	7.725e^-5	0.159	UPSTREAM CG7300 DOWNSTREAM CR44181 INTERGENIC	TF binding site mE1_TFBS_ftz_f1 mE1_TFBS_HSA
3L	18856501	3L_18856501_SNP [dm3] 3L_18863401_SNP [dm6]	C	T	7.733e^-5	0.159	UPSTREAM CG6865 INTERGENIC	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA
2R	13995333	2R_13995333_SNP [dm3] 2R_18107828_SNP [dm6]	T	A	7.755e^-5	0.16	INTRON CG5756
2L	9989924	2L_9989924_SNP [dm3] 2L_9989924_SNP [dm6]	G	T	7.759e^-5	0.16	INTRON bib	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi
X	1799118	X_1799118_SNP [dm3] X_1905085_SNP [dm6]	C	G	7.778e^-5	0.16	NON_SYNONYMOUS_CODING Edem1
X	1802423	X_1802423_SNP [dm3] X_1908390_SNP [dm6]	G	A	7.778e^-5	0.16	START_GAINED Edem1 UTR_5_PRIME Edem1 UPSTREAM Rbcn-3B & 1 other INTRON mip130	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
X	10338818	X_10338818_SNP [dm3] X_10444785_SNP [dm6]	A	C	7.808e^-5	0.16	UPSTREAM snoRNA:Me28S-A1705 INTRON CG32683
3R	842800	3R_842800_SNP [dm3] 3R_5017078_SNP [dm6]	C	G	7.825e^-5	0.16	INTRON CR45585	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	1886665	3R_1886665_SNP [dm3] 3R_6060943_SNP [dm6]	G	A	7.844e^-5	0.16	INTERGENIC	TF binding site mE1_TFBS_HSA
2R	7159571	2R_7159571_SNP [dm3] 2R_11272066_SNP [dm6]	T	C	7.851e^-5	0.16	INTRON Cpr47Ef
X	6264854	X_6264854_SNP [dm3] X_6370821_SNP [dm6]	C	A	7.855e^-5	0.16	UTR_3_PRIME Marf DOWNSTREAM PpV EXON CR44816
2R	18790237	2R_18790237_SNP [dm3] 2R_22902714_SNP [dm6]	T	A	7.862e^-5	0.16	INTRON nahoda
X	10269172	X_10269172_SNP [dm3] X_10375139_SNP [dm6]	C	G	7.863e^-5	0.16	NON_SYNONYMOUS_CODING CG32686 UTR_5_PRIME CG32686 UPSTREAM CG2898 INTRON CG17841	TF binding site mE1_TFBS_chinmo
3L	15504976	3L_15504976_SNP [dm3] 3L_15511876_SNP [dm6]	G	A	7.864e^-5	0.16	UPSTREAM Eip71CD DOWNSTREAM gdl INTRON Eip71CD	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	16057879	3R_16057879_SNP [dm3] 3R_20232157_SNP [dm6]	T	A	7.864e^-5	0.16	INTRON Nlg4
3R	15261543	3R_15261543_SNP [dm3] 3R_19435821_SNP [dm6]	C	A	7.905e^-5	0.16	INTRON CG31221
2R	14789028	2R_14789028_DEL [dm3] 2R_18901523_DEL [dm6]	AA	T	7.919e^-5	0.16	INTRON sano
3L	22912986	3L_22912986_SNP [dm3] 3L_22919886_SNP [dm6]	T	G	7.924e^-5	0.16	INTRON CG12768
2L	12188129	2L_12188129_SNP [dm3] 2L_12188129_SNP [dm6]	C	A	7.926e^-5	0.16	INTRON aret
2R	12676775	2R_12676775_SNP [dm3] 2R_16789270_SNP [dm6]	A	G	7.946e^-5	0.161	SYNONYMOUS_CODING CG5522
X	10274015	X_10274015_SNP [dm3] X_10379982_SNP [dm6]	T	C	7.966e^-5	0.161	SYNONYMOUS_CODING CG32681 INTRON CG17841
3R	13457146	3R_13457146_SNP [dm3] 3R_17631424_SNP [dm6]	T	A	7.977e^-5	0.161	UPSTREAM tRNA:CR31573 & 1 other INTRON CG43175	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Kr
X	10338823	X_10338823_SNP [dm3] X_10444790_SNP [dm6]	T	A	7.998e^-5	0.161	UPSTREAM snoRNA:Me28S-A1705 INTRON CG32683
3R	6032789	3R_6032789_SNP [dm3] 3R_10207067_SNP [dm6]	A	T	8.003e^-5	0.161	INTRON Syn & 1 other
X	20958887	X_20958887_SNP [dm3] X_21087860_SNP [dm6]	A	G	8.026e^-5	0.161	INTERGENIC
2L	11066133	2L_11066133_SNP [dm3] 2L_11066133_SNP [dm6]	G	A	8.047e^-5	0.161	INTRON Samuel	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	6973062	3R_6973062_SNP [dm3] 3R_11147340_SNP [dm6]	C	A	8.051e^-5	0.161	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	12175947	2L_12175947_SNP [dm3] 2L_12175947_SNP [dm6]	C	A	8.058e^-5	0.161	INTRON aret & 1 other	TF binding site mE1_TFBS_HSA
2L	14409796	2L_14409796_SNP [dm3] 2L_14409796_SNP [dm6]	C	A	8.072e^-5	0.162	UPSTREAM elB EXON CR44733	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	11452253	2L_11452253_SNP [dm3] 2L_11452253_SNP [dm6]	A	T	8.081e^-5	0.162	INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	8885235	2L_8885235_INS [dm3] 2L_8885235_INS [dm6]	T	TT	8.125e^-5	0.162	INTERGENIC
3L	8615343	3L_8615343_SNP [dm3] 3L_8622243_SNP [dm6]	G	A	8.131e^-5	0.162	UTR_3_PRIME GAPsec DOWNSTREAM S-Lap2	TF binding site mE1_TFBS_HSA
2L	5053384	2L_5053384_SNP [dm3] 2L_5053384_SNP [dm6]	T	C	8.141e^-5	0.162	UPSTREAM eIF-3p40 INTRON CG14040	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	5666721	2R_5666721_SNP [dm3] 2R_9779216_SNP [dm6]	A	T	8.154e^-5	0.162	INTRON CG1688	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	20958885	X_20958885_SNP [dm3] X_21087858_SNP [dm6]	A	G	8.156e^-5	0.162	INTERGENIC
2L	6508374	2L_6508374_SNP [dm3] 2L_6508374_SNP [dm6]	T	C	8.216e^-5	0.163	INTRON CG31637 EXON CR44775	TF binding site BDTNP1_TFBS_hb
X	21042283	X_21042283_SNP [dm3] X_21171256_SNP [dm6]	C	A	8.244e^-5	0.163	INTERGENIC	transposable element FlyBase
3R	27078559	3R_27078559_SNP [dm3] 3R_31252837_SNP [dm6]	T	C	8.246e^-5	0.163	UPSTREAM mRpL32 & 1 other DOWNSTREAM CG1750 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Ubx
2R	7835522	2R_7835522_DEL [dm3] 2R_11948017_DEL [dm6]	TTGAATATACAAT...	C	8.251e^-5	0.163	INTRON CG13188
2L	5146137	2L_5146137_SNP [dm3] 2L_5146137_SNP [dm6]	T	C	8.261e^-5	0.163	UPSTREAM Msp300 INTRON Msp300	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	19964488	2R_19964488_DEL [dm3] 2R_24076965_DEL [dm6]	TTCCAA	T	8.273e^-5	0.163	INTRON Mlp60A	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo
3R	5148912	3R_5148912_DEL [dm3] 3R_9323190_DEL [dm6]	GA	G	8.292e^-5	0.164	DOWNSTREAM HP1e INTRON CG8861
2L	8912729	2L_8912729_SNP [dm3] 2L_8912729_SNP [dm6]	T	G	8.335e^-5	0.164	INTRON CG34398
X	12651201	X_12651201_SNP [dm3] X_12757168_SNP [dm6]	T	A	8.362e^-5	0.164	UTR_3_PRIME ade5 DOWNSTREAM ade5	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_kn
2L	13889644	2L_13889644_SNP [dm3] 2L_13889644_SNP [dm6]	G	C	8.375e^-5	0.164	INTRON CenG1A
3L	22969815	3L_22969815_SNP [dm3] 3L_22976715_SNP [dm6]	G	T	8.384e^-5	0.164	INTERGENIC	transposable element FlyBase
3R	15171390	3R_15171390_SNP [dm3] 3R_19345668_SNP [dm6]	C	A	8.384e^-5	0.164	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3L	16030492	3L_16030492_SNP [dm3] 3L_16037392_SNP [dm6]	T	A	8.390e^-5	0.164	DOWNSTREAM CG5895 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_kn
2L	8169205	2L_8169205_SNP [dm3] 2L_8169205_SNP [dm6]	A	T	8.399e^-5	0.164	INTRON Piezo
X	8336273	X_8336273_SNP [dm3] X_8442240_SNP [dm6]	C	T	8.421e^-5	0.164	UTR_5_PRIME CG12123 DOWNSTREAM CG1440
3R	26109789	3R_26109789_SNP [dm3] 3R_30284067_SNP [dm6]	A	G	8.425e^-5	0.164	INTRON hdc
3R	26109805	3R_26109805_SNP [dm3] 3R_30284083_SNP [dm6]	G	T	8.425e^-5	0.164	INTRON hdc
2R	18007623	2R_18007623_SNP [dm3] 2R_22120118_SNP [dm6]	A	T	8.433e^-5	0.164	INTRON Vrp1
2R	18007636	2R_18007636_SNP [dm3] 2R_22120131_SNP [dm6]	G	A	8.433e^-5	0.164	INTRON Vrp1
2L	17879440	2L_17879440_SNP [dm3] 2L_17879440_SNP [dm6]	C	T	8.446e^-5	0.164	INTERGENIC
2L	10672116	2L_10672116_SNP [dm3] 2L_10672116_SNP [dm6]	C	T	8.460e^-5	0.165	DOWNSTREAM CG31871 INTERGENIC
2L	10672200	2L_10672200_SNP [dm3] 2L_10672200_SNP [dm6]	T	A	8.478e^-5	0.165	DOWNSTREAM CG31871 INTERGENIC
X	1799084	X_1799084_SNP [dm3] X_1905051_SNP [dm6]	T	C	8.488e^-5	0.165	SYNONYMOUS_CODING Edem1
2L	12840668	2L_12840668_SNP [dm3] 2L_12840668_SNP [dm6]	T	C	8.489e^-5	0.165	UPSTREAM CR44970 & 1 other INTERGENIC
3L	3951594	3L_3951594_SNP [dm3] 3L_3951594_SNP [dm6]	T	A	8.492e^-5	0.165	INTRON CG14984
2L	12175935	2L_12175935_DEL [dm3] 2L_12175935_DEL [dm6]	ATATAT	G	8.504e^-5	0.165	INTRON aret & 1 other	TF binding site mE1_TFBS_HSA
3L	15507318	3L_15507318_SNP [dm3] 3L_15514218_SNP [dm6]	T	C	8.525e^-5	0.165	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	12175971	2L_12175971_DEL [dm3] 2L_12175971_DEL [dm6]	TTC	T	8.527e^-5	0.165	INTRON aret & 1 other	TF binding site mE1_TFBS_HSA
X	9930558	X_9930558_SNP [dm3] X_10036525_SNP [dm6]	C	T	8.541e^-5	0.165	SYNONYMOUS_CODING Cht6 INTRON Cht6	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	3249570	3R_3249570_SNP [dm3] 3R_7423848_SNP [dm6]	G	T	8.563e^-5	0.165	DOWNSTREAM wa-cup INTERGENIC
X	11937605	X_11937605_SNP [dm3] X_12043572_SNP [dm6]	C	G	8.580e^-5	0.165	UPSTREAM CR43960 & 1 other INTERGENIC
X	15855238	X_15855238_SNP [dm3] X_15961205_SNP [dm6]	A	T	8.622e^-5	0.166	INTRON mmd
3R	374007	3R_374007_SNP [dm3] 3R_4548285_SNP [dm6]	G	T	8.633e^-5	0.166	INTRON CG34357	transposable element FlyBase
3L	16030402	3L_16030402_SNP [dm3] 3L_16037302_SNP [dm6]	A	T	8.660e^-5	0.166	DOWNSTREAM CG5895 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu
3R	3498092	3R_3498092_SNP [dm3] 3R_7672370_SNP [dm6]	G	T	8.662e^-5	0.166	INTRON Nlg1
2L	2669786	2L_2669786_SNP [dm3] 2L_2669786_SNP [dm6]	G	C	8.680e^-5	0.166	UPSTREAM Gr23a INTERGENIC
2L	13928788	2L_13928788_SNP [dm3] 2L_13928788_SNP [dm6]	T	C	8.682e^-5	0.166	INTRON Ance-3
2L	13928791	2L_13928791_SNP [dm3] 2L_13928791_SNP [dm6]	G	A	8.682e^-5	0.166	INTRON Ance-3
2L	15319221	2L_15319221_SNP [dm3] 2L_15319221_SNP [dm6]	C	G	8.701e^-5	0.166	UPSTREAM nht INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi
3L	18448765	3L_18448765_SNP [dm3] 3L_18455665_SNP [dm6]	A	T	8.717e^-5	0.166	DOWNSTREAM CR44670 INTERGENIC
2R	4548118	2R_4548118_DEL [dm3] 2R_8660613_DEL [dm6]	TCTAT	T	8.778e^-5	0.167	INTRON ptc	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA
2L	16830514	2L_16830514_SNP [dm3] 2L_16830514_SNP [dm6]	C	A	8.782e^-5	0.167	INTRON CG31739	TF binding site mE1_TFBS_cad
3L	16030689	3L_16030689_SNP [dm3] 3L_16037589_SNP [dm6]	A	C	8.786e^-5	0.167	DOWNSTREAM CG5895 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
X	17051918	X_17051918_SNP [dm3] X_17157885_SNP [dm6]	A	G	8.794e^-5	0.167	SYNONYMOUS_CODING xmas-2	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	11449488	2L_11449488_SNP [dm3] 2L_11449488_SNP [dm6]	G	A	8.805e^-5	0.167	INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	12677757	3R_12677757_SNP [dm3] 3R_16852035_SNP [dm6]	C	T	8.808e^-5	0.167	INTRON iab-8 & 1 other EXON iab-4	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
3L	2799773	3L_2799773_SNP [dm3] 3L_2799773_SNP [dm6]	G	A	8.814e^-5	0.167	INTRON CG43444	TF binding site mE1_TFBS_cad mE1_TFBS_sbb
2L	5145259	2L_5145259_SNP [dm3] 2L_5145259_SNP [dm6]	A	T	8.824e^-5	0.167	INTRON Msp300	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	3828108	2R_3828108_SNP [dm3] 2R_7940603_SNP [dm6]	T	C	8.849e^-5	0.167	UPSTREAM CG30380 INTRON CG30379	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	12827931	2L_12827931_INS [dm3] 2L_12827931_INS [dm6]	T	TT	8.853e^-5	0.167	INTERGENIC
2L	1873002	2L_1873002_DEL [dm3] 2L_1873002_DEL [dm6]	TT	T	8.863e^-5	0.167	INTRON CG31663 EXON CR44075
2L	4655453	2L_4655453_SNP [dm3] 2L_4655453_SNP [dm6]	T	C	8.877e^-5	0.167	INTERGENIC
2L	12665588	2L_12665588_SNP [dm3] 2L_12665588_SNP [dm6]	A	G	8.888e^-5	0.167	INTRON pdm2	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	5796410	2L_5796410_SNP [dm3] 2L_5796410_SNP [dm6]	G	A	8.901e^-5	0.167	INTRON CG9171
3L	16132752	3L_16132752_SNP [dm3] 3L_16139652_SNP [dm6]	G	T	8.921e^-5	0.167	UTR_3_PRIME CG5151 & 1 other
3L	14796716	3L_14796716_SNP [dm3] 3L_14803616_SNP [dm6]	A	G	8.925e^-5	0.167	UPSTREAM gnu INTERGENIC
X	12651186	X_12651186_SNP [dm3] X_12757153_SNP [dm6]	T	C	8.943e^-5	0.167	UTR_3_PRIME ade5 DOWNSTREAM ade5	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_kn

Missing results

By genomic position
Variant impact
Gene name

SegregVariants_2L phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results