DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=3.234e^-13)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
wolba	0.06403
In_2L_t	0.02707

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_2L_t	6.7412	0.0344
In_3R_K	5.3994	0.0672

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2286 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	15055734	3L_15055734_SNP [dm3] 3L_15062634_SNP [dm6]	T	C	1.178e^-7	0.221	UPSTREAM CG13460 & 1 other INTRON Sytbeta
3R	17370221	3R_17370221_SNP [dm3] 3R_21544499_SNP [dm6]	C	A	1.409e^-6	0.56	INTERGENIC	TF binding site BDTNP1_TFBS_prd
3R	10249528	3R_10249528_SNP [dm3] 3R_14423806_SNP [dm6]	A	G	1.487e^-6	0.56	INTRON cv-c
2L	11334482	2L_11334482_INS [dm3] 2L_11334482_INS [dm6]	G	GG	1.504e^-6	0.56	INTERGENIC
3R	17618570	3R_17618570_SNP [dm3] 3R_21792848_SNP [dm6]	A	G	1.597e^-6	0.56	INTRON CASK	TF binding site mE1_TFBS_cad
3L	11142376	3L_11142376_SNP [dm3] 3L_11149276_SNP [dm6]	G	A	1.793e^-6	0.56	DOWNSTREAM CG6216 INTRON CG32082
3L	15881100	3L_15881100_SNP [dm3] 3L_15888000_SNP [dm6]	A	G	3.197e^-6	0.701	INTRON pHCl
3L	4410601	3L_4410601_SNP [dm3] 3L_4410601_SNP [dm6]	T	C	3.791e^-6	0.701	INTRON DOR	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3L	4410596	3L_4410596_SNP [dm3] 3L_4410596_SNP [dm6]	T	A	4.376e^-6	0.701	INTRON DOR	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3R	24205174	3R_24205174_SNP [dm3] 3R_28379452_SNP [dm6]	A	G	4.387e^-6	0.701	INTERGENIC
3L	4410589	3L_4410589_SNP [dm3] 3L_4410589_SNP [dm6]	T	G	4.412e^-6	0.701	INTRON DOR	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
X	5449728	X_5449728_SNP [dm3] X_5555695_SNP [dm6]	C	A	4.486e^-6	0.701	INTRON Vsx2	TF binding site mE1_TFBS_cnc mE1_TFBS_Kr
3L	15889722	3L_15889722_SNP [dm3] 3L_15896622_SNP [dm6]	A	G	6.207e^-6	0.757	INTRON pHCl
3L	7799372	3L_7799372_SNP [dm3] 3L_7806272_SNP [dm6]	T	G	6.637e^-6	0.757	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3L	18364980	3L_18364980_SNP [dm3] 3L_18371880_SNP [dm6]	C	T	6.785e^-6	0.757	INTERGENIC
3R	17365836	3R_17365836_SNP [dm3] 3R_21540114_SNP [dm6]	A	T	7.033e^-6	0.757	INTERGENIC
3L	12853414	3L_12853414_SNP [dm3] 3L_12860314_SNP [dm6]	A	G	7.114e^-6	0.757	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_sens
3L	8675181	3L_8675181_SNP [dm3] 3L_8682081_SNP [dm6]	G	A	7.262e^-6	0.757	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens
3L	8607436	3L_8607436_SNP [dm3] 3L_8614336_SNP [dm6]	C	T	8.323e^-6	0.794	INTRON CG6282
2L	13539501	2L_13539501_SNP [dm3] 2L_13539501_SNP [dm6]	G	A	9.177e^-6	0.794	INTRON B4
3L	5775282	3L_5775282_SNP [dm3] 3L_5782182_SNP [dm6]	A	C	9.419e^-6	0.794	NON_SYNONYMOUS_CODING PGRP-LD UTR_3_PRIME Pmi
3L	7799375	3L_7799375_SNP [dm3] 3L_7806275_SNP [dm6]	C	T	1.062e^-5	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3R	18651406	3R_18651406_SNP [dm3] 3R_22825684_SNP [dm6]	C	T	1.145e^-5	0.794	EXON CR44350
3L	12853276	3L_12853276_SNP [dm3] 3L_12860176_SNP [dm6]	G	A	1.154e^-5	0.794	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	9269114	2R_9269114_SNP [dm3] 2R_13381609_SNP [dm6]	T	G	1.184e^-5	0.794	INTERGENIC
X	8418184	X_8418184_SNP [dm3] X_8524151_SNP [dm6]	T	A	1.202e^-5	0.794	INTRON Nrg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	15886584	3L_15886584_SNP [dm3] 3L_15893484_SNP [dm6]	G	A	1.210e^-5	0.794	INTRON pHCl
2R	8294112	2R_8294112_SNP [dm3] 2R_12406607_SNP [dm6]	T	C	1.253e^-5	0.794	UTR_3_PRIME Cpr49Af DOWNSTREAM Cpr49Af
2R	14762500	2R_14762500_SNP [dm3] 2R_18874995_SNP [dm6]	A	C	1.254e^-5	0.794	INTERGENIC
3L	12853279	3L_12853279_SNP [dm3] 3L_12860179_SNP [dm6]	A	G	1.326e^-5	0.794	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	8634391	3L_8634391_SNP [dm3] 3L_8641291_SNP [dm6]	T	A	1.377e^-5	0.794	INTRON Cpr66D
3R	17618547	3R_17618547_SNP [dm3] 3R_21792825_SNP [dm6]	C	A	1.662e^-5	0.794	INTRON CASK	TF binding site mE1_TFBS_cad
X	8466240	X_8466240_SNP [dm3] X_8572207_SNP [dm6]	G	A	1.686e^-5	0.794	SYNONYMOUS_CODING spirit	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7799352	3L_7799352_SNP [dm3] 3L_7806252_SNP [dm6]	C	T	1.688e^-5	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3L	7799380	3L_7799380_SNP [dm3] 3L_7806280_SNP [dm6]	G	A	1.691e^-5	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
X	3426860	X_3426860_SNP [dm3] X_3532827_SNP [dm6]	T	G	1.722e^-5	0.794	INTRON CG32791
X	11051264	X_11051264_SNP [dm3] X_11157231_SNP [dm6]	G	A	1.755e^-5	0.794	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_sens
2R	12637185	2R_12637185_SNP [dm3] 2R_16749680_SNP [dm6]	G	A	1.794e^-5	0.794	UPSTREAM Acp53C14b DOWNSTREAM Acp53Ea INTERGENIC
3L	23033953	3L_23033953_SNP [dm3] 3L_23040853_SNP [dm6]	T	A	1.944e^-5	0.794	DOWNSTREAM nrm INTERGENIC
2R	6058050	2R_6058050_SNP [dm3] 2R_10170545_SNP [dm6]	C	T	2.080e^-5	0.794	INTRON KCNQ
2L	7812417	2L_7812417_SNP [dm3] 2L_7812417_SNP [dm6]	C	A	2.246e^-5	0.794	INTRON LanB1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3R	17055258	3R_17055258_SNP [dm3] 3R_21229536_SNP [dm6]	T	G	2.290e^-5	0.794	DOWNSTREAM e & 1 other INTERGENIC
3R	5366433	3R_5366433_SNP [dm3] 3R_9540711_SNP [dm6]	A	T	2.290e^-5	0.794	SYNONYMOUS_CODING mura	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10597846	2R_10597846_INS [dm3] 2R_14710341_INS [dm6]	A	AA	2.315e^-5	0.794	INTRON mspo
3R	9882385	3R_9882385_DEL [dm3] 3R_14056663_DEL [dm6]	ATAG	T	2.344e^-5	0.794	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	1414405	3L_1414405_SNP [dm3] 3L_1414405_SNP [dm6]	C	T	2.350e^-5	0.794	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	6323115	X_6323115_SNP [dm3] X_6429082_SNP [dm6]	T	G	2.395e^-5	0.794	INTRON CG42340
2L	7813951	2L_7813951_SNP [dm3] 2L_7813951_SNP [dm6]	T	C	2.452e^-5	0.794	UPSTREAM LanB1 INTRON LanB1
3L	7799586	3L_7799586_SNP [dm3] 3L_7806486_SNP [dm6]	G	C	2.552e^-5	0.794	INTRON CG32369	TF binding site mE1_TFBS_Trl
3L	14134595	3L_14134595_DEL [dm3] 3L_14141495_DEL [dm6]	AAA	A	2.578e^-5	0.794	INTERGENIC	regulatory region REDfly_CRMs
3R	23337364	3R_23337364_SNP [dm3] 3R_27511642_SNP [dm6]	C	G	2.602e^-5	0.794	INTERGENIC
2L	4523664	2L_4523664_SNP [dm3] 2L_4523664_SNP [dm6]	A	C	2.617e^-5	0.794	INTRON dp
2R	10956731	2R_10956731_SNP [dm3] 2R_15069226_SNP [dm6]	C	T	2.677e^-5	0.794	INTERGENIC
3L	450240	3L_450240_SNP [dm3] 3L_450240_SNP [dm6]	T	C	2.720e^-5	0.794	INTRON klar
3R	18651445	3R_18651445_SNP [dm3] 3R_22825723_SNP [dm6]	G	A	2.739e^-5	0.794	EXON CR44350
3L	7330950	3L_7330950_SNP [dm3] 3L_7337850_SNP [dm6]	T	C	2.784e^-5	0.794	NON_SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	4523681	2L_4523681_SNP [dm3] 2L_4523681_SNP [dm6]	G	A	2.860e^-5	0.794	INTRON dp
3L	1738266	3L_1738266_SNP [dm3] 3L_1738266_SNP [dm6]	A	T	2.943e^-5	0.794	UPSTREAM Gk & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_hb
3L	9819590	3L_9819590_SNP [dm3] 3L_9826490_SNP [dm6]	A	C	3.014e^-5	0.794	SYNONYMOUS_CODING CG43897 INTRON CG43897
3L	9566611	3L_9566611_SNP [dm3] 3L_9573511_SNP [dm6]	A	C	3.066e^-5	0.794	INTRON CG42673
3R	24194442	3R_24194442_SNP [dm3] 3R_28368720_SNP [dm6]	C	T	3.147e^-5	0.794	INTERGENIC
3L	11924188	3L_11924188_SNP [dm3] 3L_11931088_SNP [dm6]	T	C	3.171e^-5	0.794	INTRON CG44837 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	9819557	3L_9819557_SNP [dm3] 3L_9826457_SNP [dm6]	C	A	3.176e^-5	0.794	SYNONYMOUS_CODING CG43897 INTRON CG43897
3R	18651398	3R_18651398_SNP [dm3] 3R_22825676_SNP [dm6]	C	T	3.177e^-5	0.794	EXON CR44350
3R	17618513	3R_17618513_SNP [dm3] 3R_21792791_SNP [dm6]	A	C	3.196e^-5	0.794	INTRON CASK	TF binding site mE1_TFBS_cad
X	17243971	X_17243971_SNP [dm3] X_17349938_SNP [dm6]	C	T	3.349e^-5	0.794	INTERGENIC
3L	9627046	3L_9627046_SNP [dm3] 3L_9633946_SNP [dm6]	G	A	3.600e^-5	0.794	INTRON fry	TF binding site mE1_TFBS_cad
3R	19703870	3R_19703870_SNP [dm3] 3R_23878148_SNP [dm6]	A	G	3.613e^-5	0.794	INTRON Pli
2R	14762345	2R_14762345_SNP [dm3] 2R_18874840_SNP [dm6]	C	A	3.623e^-5	0.794	INTERGENIC
3L	15889772	3L_15889772_SNP [dm3] 3L_15896672_SNP [dm6]	G	A	3.716e^-5	0.794	INTRON pHCl
3R	21279810	3R_21279810_INS [dm3] 3R_25454088_INS [dm6]	G	GCACTTATAAGTGTAAG...	3.729e^-5	0.794	INTRON Fur1
3L	7799176	3L_7799176_SNP [dm3] 3L_7806076_SNP [dm6]	T	C	3.738e^-5	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3L	5774228	3L_5774228_SNP [dm3] 3L_5781128_SNP [dm6]	C	T	3.775e^-5	0.794	START_GAINED PGRP-LD UTR_5_PRIME PGRP-LD UTR_3_PRIME Pmi UPSTREAM PGRP-LD & 1 other INTRON PGRP-LD & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	7331186	3L_7331186_SNP [dm3] 3L_7338086_SNP [dm6]	C	T	3.816e^-5	0.794	NON_SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	7719578	2R_7719578_SNP [dm3] 2R_11832073_SNP [dm6]	A	G	3.825e^-5	0.794	INTRON Sobp	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	18370650	2R_18370650_SNP [dm3] 2R_22483145_SNP [dm6]	T	G	3.869e^-5	0.794	UPSTREAM CG4554 DOWNSTREAM CG4752 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	14762153	2R_14762153_SNP [dm3] 2R_18874648_SNP [dm6]	C	A	3.920e^-5	0.794	INTERGENIC
X	2477618	X_2477618_SNP [dm3] X_2583585_SNP [dm6]	C	G	3.938e^-5	0.794	SYNONYMOUS_CODING CG13759 DOWNSTREAM CG13760	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9627055	3L_9627055_SNP [dm3] 3L_9633955_SNP [dm6]	G	A	3.966e^-5	0.794	INTRON fry	TF binding site mE1_TFBS_cad
3L	14372394	3L_14372394_SNP [dm3] 3L_14379294_SNP [dm6]	C	T	4.042e^-5	0.794	INTERGENIC
3L	14941736	3L_14941736_SNP [dm3] 3L_14948636_SNP [dm6]	G	A	4.080e^-5	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3R	17055240	3R_17055240_SNP [dm3] 3R_21229518_SNP [dm6]	A	C	4.097e^-5	0.794	DOWNSTREAM e & 1 other INTERGENIC
3L	9824838	3L_9824838_SNP [dm3] 3L_9831738_SNP [dm6]	A	T	4.282e^-5	0.794	INTRON CG43897
2R	14303689	2R_14303689_SNP [dm3] 2R_18416184_SNP [dm6]	C	T	4.358e^-5	0.794	SYNONYMOUS_CODING Dp1	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	7812421	2L_7812421_SNP [dm3] 2L_7812421_SNP [dm6]	A	G	4.399e^-5	0.794	INTRON LanB1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	20682224	2L_20682224_DEL [dm3] 2L_20682224_DEL [dm6]	ATATA	A	4.445e^-5	0.794	UPSTREAM CG2617 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	15250918	3R_15250918_SNP [dm3] 3R_19425196_SNP [dm6]	T	A	4.470e^-5	0.794	UTR_5_PRIME CG3517 INTRON CG31221	TF binding site mE1_TFBS_cad
X	5449785	X_5449785_SNP [dm3] X_5555752_SNP [dm6]	G	A	4.607e^-5	0.794	INTRON Vsx2	TF binding site mE1_TFBS_Kr
2L	13702736	2L_13702736_SNP [dm3] 2L_13702736_SNP [dm6]	C	T	4.655e^-5	0.794	INTRON CG31814
3L	9819560	3L_9819560_SNP [dm3] 3L_9826460_SNP [dm6]	A	C	4.761e^-5	0.794	SYNONYMOUS_CODING CG43897 INTRON CG43897
X	11051435	X_11051435_SNP [dm3] X_11157402_SNP [dm6]	C	T	4.779e^-5	0.794	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	11051447	X_11051447_SNP [dm3] X_11157414_SNP [dm6]	G	A	4.779e^-5	0.794	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	11051474	X_11051474_SNP [dm3] X_11157441_SNP [dm6]	G	A	4.779e^-5	0.794	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	14093531	3R_14093531_SNP [dm3] 3R_18267809_SNP [dm6]	G	C	4.824e^-5	0.794	UTR_5_PRIME CG18599	TF binding site mE1_TFBS_run
2L	3236091	2L_3236091_SNP [dm3] 2L_3236091_SNP [dm6]	A	C	4.830e^-5	0.794	INTERGENIC
3L	9566619	3L_9566619_SNP [dm3] 3L_9573519_SNP [dm6]	G	T	4.903e^-5	0.794	INTRON CG42673
2L	9157681	2L_9157681_SNP [dm3] 2L_9157681_SNP [dm6]	A	G	4.905e^-5	0.794	INTRON CG32982	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	12653896	2R_12653896_SNP [dm3] 2R_16766391_SNP [dm6]	C	T	4.938e^-5	0.794	UPSTREAM CG5348 & 2 others INTRON unc-104
2L	2430940	2L_2430940_SNP [dm3] 2L_2430940_SNP [dm6]	T	C	4.968e^-5	0.794	INTRON dpp
3L	11924175	3L_11924175_DEL [dm3] 3L_11931075_DEL [dm6]	TT	T	5.037e^-5	0.794	INTRON CG44837 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	12957663	3R_12957663_SNP [dm3] 3R_17131941_SNP [dm6]	G	A	5.040e^-5	0.794	SYNONYMOUS_CODING CG4053 UPSTREAM CG31266	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2R	16921396	2R_16921396_SNP [dm3] 2R_21033891_SNP [dm6]	A	C	5.117e^-5	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	16176619	3R_16176619_SNP [dm3] 3R_20350897_SNP [dm6]	T	G	5.125e^-5	0.794	INTERGENIC
3R	10215088	3R_10215088_SNP [dm3] 3R_14389366_SNP [dm6]	A	T	5.126e^-5	0.794	INTERGENIC
3L	22641876	3L_22641876_SNP [dm3] 3L_22648776_SNP [dm6]	G	A	5.182e^-5	0.794	UPSTREAM CG33771 DOWNSTREAM CG33769 INTRON CG33770
2R	14278972	2R_14278972_SNP [dm3] 2R_18391467_SNP [dm6]	G	T	5.262e^-5	0.794	UPSTREAM CG15068 INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	15884162	3L_15884162_SNP [dm3] 3L_15891062_SNP [dm6]	A	G	5.311e^-5	0.794	INTRON pHCl
3L	4177766	3L_4177766_SNP [dm3] 3L_4177766_SNP [dm6]	G	A	5.321e^-5	0.794	UTR_5_PRIME Teh4 INTRON CG18675	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	27232436	3R_27232436_SNP [dm3] 3R_31406714_SNP [dm6]	C	T	5.367e^-5	0.794	INTRON Gprk2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	9738642	3R_9738642_SNP [dm3] 3R_13912920_SNP [dm6]	T	G	5.375e^-5	0.794	INTERGENIC	TF binding site mE1_TFBS_inv
3L	6391688	3L_6391688_SNP [dm3] 3L_6398588_SNP [dm6]	A	T	5.391e^-5	0.794	INTERGENIC
3L	9616749	3L_9616749_SNP [dm3] 3L_9623649_SNP [dm6]	T	C	5.419e^-5	0.794	UTR_3_PRIME LanB2 UPSTREAM CG3335
3L	8645748	3L_8645748_SNP [dm3] 3L_8652648_SNP [dm6]	G	A	5.459e^-5	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_sens
2L	7484924	2L_7484924_SNP [dm3] 2L_7484924_SNP [dm6]	G	C	5.545e^-5	0.794	INTRON Ziz
3L	5147044	3L_5147044_SNP [dm3] 3L_5153944_SNP [dm6]	C	T	5.546e^-5	0.794	SYNONYMOUS_CODING Srp54k	TF binding site mE1_TFBS_sens
3L	7799451	3L_7799451_SNP [dm3] 3L_7806351_SNP [dm6]	T	G	5.561e^-5	0.794	INTRON CG32369	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	12638757	2R_12638757_SNP [dm3] 2R_16751252_SNP [dm6]	G	A	5.640e^-5	0.794	UTR_5_PRIME Acp53C14c UPSTREAM Acp53Ea DOWNSTREAM unc-104
X	5189953	X_5189953_SNP [dm3] X_5295920_SNP [dm6]	T	A	5.698e^-5	0.794	UPSTREAM CG42749 INTERGENIC
3R	3865828	3R_3865828_SNP [dm3] 3R_8040106_SNP [dm6]	A	C	5.730e^-5	0.794	DOWNSTREAM CR44936 INTERGENIC
X	8466203	X_8466203_SNP [dm3] X_8572170_SNP [dm6]	T	G	5.828e^-5	0.794	SYNONYMOUS_CODING spirit	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3R	5648003	3R_5648003_SNP [dm3] 3R_9822281_SNP [dm6]	A	G	5.842e^-5	0.794	DOWNSTREAM CG34302 INTERGENIC
3R	25070301	3R_25070301_SNP [dm3] 3R_29244579_SNP [dm6]	T	C	5.851e^-5	0.794	UPSTREAM CG31445 DOWNSTREAM SP1029 INTRON CG31445
3R	14196704	3R_14196704_SNP [dm3] 3R_18370982_SNP [dm6]	C	T	5.900e^-5	0.794	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2R	18370728	2R_18370728_SNP [dm3] 2R_22483223_SNP [dm6]	G	A	5.992e^-5	0.794	UPSTREAM CG4554 DOWNSTREAM CG4752 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25795598	3R_25795598_SNP [dm3] 3R_29969876_SNP [dm6]	C	G	6.019e^-5	0.794	UPSTREAM TkR99D INTERGENIC
3L	2392464	3L_2392464_SNP [dm3] 3L_2392464_SNP [dm6]	A	G	6.077e^-5	0.794	INTRON CG45186
2R	19601518	2R_19601518_SNP [dm3] 2R_23713995_SNP [dm6]	C	T	6.104e^-5	0.794	UTR_5_PRIME Sesn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	14093822	3R_14093822_SNP [dm3] 3R_18268100_SNP [dm6]	C	A	6.185e^-5	0.794	INTRON CG18599	TF binding site mE1_TFBS_HSA mE1_TFBS_run
2L	3269315	2L_3269315_SNP [dm3] 2L_3269315_SNP [dm6]	C	T	6.235e^-5	0.794	UPSTREAM CG3347 DOWNSTREAM CR44484 INTERGENIC
2L	3587900	2L_3587900_SNP [dm3] 2L_3587900_SNP [dm6]	G	A	6.239e^-5	0.794	DOWNSTREAM CR43823 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
2R	17092769	2R_17092769_SNP [dm3] 2R_21205264_SNP [dm6]	T	C	6.292e^-5	0.794	SYNONYMOUS_CODING Glycogenin INTRON CG44245
2R	18370282	2R_18370282_SNP [dm3] 2R_22482777_SNP [dm6]	G	A	6.295e^-5	0.794	NON_SYNONYMOUS_CODING CG4752 UPSTREAM CG4554	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	18370803	2R_18370803_SNP [dm3] 2R_22483298_SNP [dm6]	C	T	6.295e^-5	0.794	UPSTREAM CG4554 DOWNSTREAM CG4752 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	18370808	2R_18370808_SNP [dm3] 2R_22483303_SNP [dm6]	G	A	6.295e^-5	0.794	UTR_5_PRIME CG4554 DOWNSTREAM CG4752	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	16175596	2R_16175596_SNP [dm3] 2R_20288091_SNP [dm6]	C	T	6.334e^-5	0.794	SYNONYMOUS_CODING CG34199 UPSTREAM CG16868 DOWNSTREAM Cpr56F
2R	9269202	2R_9269202_SNP [dm3] 2R_13381697_SNP [dm6]	G	A	6.407e^-5	0.794	INTERGENIC
3R	17988930	3R_17988930_SNP [dm3] 3R_22163208_SNP [dm6]	C	G	6.444e^-5	0.794	INTRON SKIP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	9949025	3L_9949025_SNP [dm3] 3L_9955925_SNP [dm6]	G	T	6.462e^-5	0.794	INTRON CG34356
2R	16020141	2R_16020141_SNP [dm3] 2R_20132636_SNP [dm6]	C	T	6.463e^-5	0.794	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	8646763	3L_8646763_SNP [dm3] 3L_8653663_SNP [dm6]	C	T	6.466e^-5	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	3427591	X_3427591_SNP [dm3] X_3533558_SNP [dm6]	G	A	6.494e^-5	0.794	INTRON CG32791
3L	10875196	3L_10875196_SNP [dm3] 3L_10882096_SNP [dm6]	C	T	6.515e^-5	0.794	UTR_5_PRIME CG6409 UPSTREAM CG7949 & 1 other
3L	17219151	3L_17219151_SNP [dm3] 3L_17226051_SNP [dm6]	G	T	6.560e^-5	0.794	INTRON Rbp6
2L	2318258	2L_2318258_SNP [dm3] 2L_2318258_SNP [dm6]	T	A	6.598e^-5	0.794	INTRON CG9967 & 1 other
3L	9252399	3L_9252399_SNP [dm3] 3L_9259299_SNP [dm6]	T	A	6.618e^-5	0.794	INTRON GluRIB	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	8466174	X_8466174_SNP [dm3] X_8572141_SNP [dm6]	A	C	6.694e^-5	0.794	SYNONYMOUS_CODING spirit	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
2L	9445624	2L_9445624_SNP [dm3] 2L_9445624_SNP [dm6]	G	T	6.729e^-5	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
X	15811723	X_15811723_SNP [dm3] X_15917690_SNP [dm6]	A	T	6.829e^-5	0.794	SYNONYMOUS_CODING CG8909	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	17767855	2R_17767855_SNP [dm3] 2R_21880350_SNP [dm6]	G	A	6.843e^-5	0.794	INTRON Fili	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	12851997	3L_12851997_SNP [dm3] 3L_12858897_SNP [dm6]	C	A	6.860e^-5	0.794	NON_SYNONYMOUS_CODING CG32107
3R	13528391	3R_13528391_SNP [dm3] 3R_17702669_SNP [dm6]	T	G	6.913e^-5	0.794	INTRON osa	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	16175408	2R_16175408_SNP [dm3] 2R_20287903_SNP [dm6]	C	A	6.933e^-5	0.794	NON_SYNONYMOUS_CODING CG34199 UPSTREAM CG16868 DOWNSTREAM Cpr56F
X	14685801	X_14685801_SNP [dm3] X_14791768_SNP [dm6]	C	T	6.952e^-5	0.794	NON_SYNONYMOUS_CODING rut INTRON rut	TF binding site mE1_TFBS_chinmo
3L	9252371	3L_9252371_SNP [dm3] 3L_9259271_SNP [dm6]	T	A	6.978e^-5	0.794	INTRON GluRIB	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	3277183	3L_3277183_SNP [dm3] 3L_3277183_SNP [dm6]	C	G	7.038e^-5	0.794	DOWNSTREAM CG14960 INTERGENIC	TF binding site mE1_TFBS_bab1
3L	11444323	3L_11444323_SNP [dm3] 3L_11451223_SNP [dm6]	C	G	7.047e^-5	0.794	INTERGENIC
2R	15797275	2R_15797275_SNP [dm3] 2R_19909770_SNP [dm6]	C	G	7.078e^-5	0.794	DOWNSTREAM CR44573 INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	2671552	2L_2671552_SNP [dm3] 2L_2671552_SNP [dm6]	G	C	7.173e^-5	0.794	SYNONYMOUS_CODING Gr23a INTRON Gr23a	TF binding site mE1_TFBS_sens
2L	11313522	2L_11313522_SNP [dm3] 2L_11313522_SNP [dm6]	T	C	7.239e^-5	0.794	INTERGENIC
3R	10215108	3R_10215108_SNP [dm3] 3R_14389386_SNP [dm6]	C	T	7.272e^-5	0.794	INTERGENIC
3L	9627306	3L_9627306_SNP [dm3] 3L_9634206_SNP [dm6]	C	A	7.305e^-5	0.794	INTRON fry
3R	23477228	3R_23477228_SNP [dm3] 3R_27651506_SNP [dm6]	G	A	7.319e^-5	0.794	UTR_3_PRIME tau UPSTREAM tau INTRON tau
3L	8875006	3L_8875006_DEL [dm3] 3L_8881906_DEL [dm6]	CC	C	7.327e^-5	0.794	INTRON dally
3L	14895641	3L_14895641_SNP [dm3] 3L_14902541_SNP [dm6]	G	A	7.361e^-5	0.794	INTERGENIC
3L	16235259	3L_16235259_SNP [dm3] 3L_16242159_SNP [dm6]	A	G	7.368e^-5	0.794	INTERGENIC
X	10110446	X_10110446_SNP [dm3] X_10216413_SNP [dm6]	T	G	7.373e^-5	0.794	UTR_3_PRIME l_1_G0230 INTRON CG2962
3R	9764146	3R_9764146_SNP [dm3] 3R_13938424_SNP [dm6]	C	T	7.390e^-5	0.794	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
2R	7548618	2R_7548618_SNP [dm3] 2R_11661113_SNP [dm6]	G	A	7.396e^-5	0.794	UPSTREAM tRNA:M2:48Bb INTRON Roc2	TF binding site BDTNP1_TFBS_dl
2L	3574190	2L_3574190_SNP [dm3] 2L_3574190_SNP [dm6]	C	T	7.519e^-5	0.794	INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_cad mE1_TFBS_Trl
3L	12519071	3L_12519071_SNP [dm3] 3L_12525971_SNP [dm6]	A	T	7.655e^-5	0.794	DOWNSTREAM ver INTRON eIF-2beta	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	2393411	3L_2393411_SNP [dm3] 3L_2393411_SNP [dm6]	G	A	7.684e^-5	0.794	INTRON CG45186	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	9269197	2R_9269197_SNP [dm3] 2R_13381692_SNP [dm6]	A	G	7.714e^-5	0.794	INTERGENIC
3L	23043782	3L_23043782_INS [dm3] 3L_23050682_INS [dm6]	C	CCCTCCAGAC	7.734e^-5	0.794	INTERGENIC	transposable element FlyBase
3L	995863	3L_995863_SNP [dm3] 3L_995863_SNP [dm6]	G	T	7.741e^-5	0.794	DOWNSTREAM trio & 1 other INTERGENIC
3R	26409360	3R_26409360_SNP [dm3] 3R_30583638_SNP [dm6]	C	A	7.794e^-5	0.794	UTR_5_PRIME Rpt6R DOWNSTREAM CG9717	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
3L	12663205	3L_12663205_SNP [dm3] 3L_12670105_SNP [dm6]	G	C	7.884e^-5	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	13440131	X_13440131_SNP [dm3] X_13546098_SNP [dm6]	A	G	7.976e^-5	0.794	INTERGENIC
2R	14303713	2R_14303713_SNP [dm3] 2R_18416208_SNP [dm6]	G	C	7.977e^-5	0.794	SYNONYMOUS_CODING Dp1	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	2698884	X_2698884_SNP [dm3] X_2804851_SNP [dm6]	A	C	8.072e^-5	0.794	INTRON kirre	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	3269331	2L_3269331_SNP [dm3] 2L_3269331_SNP [dm6]	A	T	8.079e^-5	0.794	UPSTREAM CG3347 DOWNSTREAM CR44484 INTERGENIC
X	14265360	X_14265360_SNP [dm3] X_14371327_SNP [dm6]	G	A	8.092e^-5	0.794	INTRON dpr8
3L	996409	3L_996409_SNP [dm3] 3L_996409_SNP [dm6]	T	C	8.121e^-5	0.794	UTR_3_PRIME trio DOWNSTREAM CG12038 & 1 other
3R	4931102	3R_4931102_SNP [dm3] 3R_9105380_SNP [dm6]	A	C	8.222e^-5	0.794	INTRON pum
3R	13673851	3R_13673851_SNP [dm3] 3R_17848129_SNP [dm6]	T	C	8.228e^-5	0.794	INTRON tinc
3L	995306	3L_995306_SNP [dm3] 3L_995306_SNP [dm6]	A	C	8.268e^-5	0.794	SYNONYMOUS_CODING CG12038 DOWNSTREAM trio	TF binding site mE1_TFBS_cad
3L	14372390	3L_14372390_SNP [dm3] 3L_14379290_SNP [dm6]	T	A	8.388e^-5	0.794	INTERGENIC
2L	18501185	2L_18501185_SNP [dm3] 2L_18501185_SNP [dm6]	A	C	8.395e^-5	0.794	UTR_5_PRIME kon UPSTREAM kon	TF binding site BDTNP1_TFBS_da
3R	15253011	3R_15253011_SNP [dm3] 3R_19427289_SNP [dm6]	G	T	8.401e^-5	0.794	INTRON CG31221
3R	15696990	3R_15696990_SNP [dm3] 3R_19871268_SNP [dm6]	A	G	8.455e^-5	0.794	INTRON CG4562	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	25919979	3R_25919979_SNP [dm3] 3R_30094257_SNP [dm6]	T	G	8.504e^-5	0.794	INTRON sima	TF binding site mE1_TFBS_inv
2L	3530559	2L_3530559_SNP [dm3] 2L_3530559_SNP [dm6]	T	A	8.542e^-5	0.794	UPSTREAM Che-13 & 1 other INTERGENIC	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_zfh1
2R	9269238	2R_9269238_SNP [dm3] 2R_13381733_SNP [dm6]	G	A	8.562e^-5	0.794	INTERGENIC
3R	24205494	3R_24205494_SNP [dm3] 3R_28379772_SNP [dm6]	T	G	8.592e^-5	0.794	INTERGENIC
X	4547630	X_4547630_SNP [dm3] X_4653597_SNP [dm6]	T	G	8.628e^-5	0.794	NON_SYNONYMOUS_CODING CG15473 INTRON Cbp80	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
2L	16293805	2L_16293805_SNP [dm3] 2L_16293805_SNP [dm6]	C	T	8.727e^-5	0.794	UPSTREAM CG13258 & 2 others INTERGENIC
3R	11596080	3R_11596080_SNP [dm3] 3R_15770358_SNP [dm6]	A	T	8.751e^-5	0.794	INTERGENIC
2R	11666081	2R_11666081_SNP [dm3] 2R_15778576_SNP [dm6]	A	G	8.796e^-5	0.794	INTRON Zasp52
X	8445284	X_8445284_SNP [dm3] X_8551251_SNP [dm6]	T	G	8.831e^-5	0.794	DOWNSTREAM Nrg INTRON Nrg	TF binding site mE1_TFBS_HSA
X	4908359	X_4908359_SNP [dm3] X_5014326_SNP [dm6]	A	C	8.929e^-5	0.794	INTRON CR44833
X	8437018	X_8437018_INS [dm3] X_8542985_INS [dm6]	G	GCGCAGT	8.979e^-5	0.794	INTRON Nrg
3L	4751647	3L_4751647_SNP [dm3] 3L_4751647_SNP [dm6]	T	C	9.082e^-5	0.794	DOWNSTREAM CG12493 INTRON RhoGEF64C
3R	5822064	3R_5822064_SNP [dm3] 3R_9996342_SNP [dm6]	T	A	9.145e^-5	0.794	NON_SYNONYMOUS_CODING Gr85a UPSTREAM Spn85F DOWNSTREAM Glut4EF	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	18638378	2R_18638378_SNP [dm3] 2R_22750873_SNP [dm6]	G	A	9.186e^-5	0.794	INTRON CG42260	TF binding site mE1_TFBS_inv
2L	5501492	2L_5501492_DEL [dm3] 2L_5501492_DEL [dm6]	ATTTCGTGGGCAGCA...	A	9.239e^-5	0.794	INTERGENIC	TF binding site mE1_TFBS_cad
2L	5501508	2L_5501508_SNP [dm3] 2L_5501508_SNP [dm6]	A	G	9.239e^-5	0.794	INTERGENIC	TF binding site mE1_TFBS_cad
X	2184217	X_2184217_SNP [dm3] X_2290184_SNP [dm6]	A	G	9.272e^-5	0.794	INTRON CG2865	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	24204667	3R_24204667_SNP [dm3] 3R_28378945_SNP [dm6]	C	T	9.311e^-5	0.794	INTERGENIC
3R	11506117	3R_11506117_INS [dm3] 3R_15680395_INS [dm6]	A	ACA	9.367e^-5	0.794	INTRON pxb
2L	3646201	2L_3646201_SNP [dm3] 2L_3646201_SNP [dm6]	A	T	9.372e^-5	0.794	UPSTREAM for INTRON for
X	2540756	X_2540756_SNP [dm3] X_2646723_SNP [dm6]	C	G	9.409e^-5	0.794	UTR_5_PRIME sgg INTRON sgg	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	9408807	3L_9408807_SNP [dm3] 3L_9415707_SNP [dm6]	G	A	9.438e^-5	0.794	DOWNSTREAM CG3982 INTRON CG3967
3L	15884213	3L_15884213_SNP [dm3] 3L_15891113_SNP [dm6]	C	A	9.450e^-5	0.794	INTRON pHCl
2L	6148076	2L_6148076_SNP [dm3] 2L_6148076_SNP [dm6]	A	C	9.478e^-5	0.794	INTERGENIC
3L	18446551	3L_18446551_INS [dm3] 3L_18453451_INS [dm6]	T	TT	9.576e^-5	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	14383138	2R_14383138_SNP [dm3] 2R_18495633_SNP [dm6]	T	A	9.626e^-5	0.794	INTRON CG30116
3L	14333618	3L_14333618_SNP [dm3] 3L_14340518_SNP [dm6]	G	T	9.663e^-5	0.794	INTRON fz	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	5798597	3R_5798597_SNP [dm3] 3R_9972875_SNP [dm6]	T	A	9.677e^-5	0.794	INTRON Glut4EF
3L	12853483	3L_12853483_SNP [dm3] 3L_12860383_SNP [dm6]	A	G	9.803e^-5	0.794	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_sens
X	5290043	X_5290043_SNP [dm3] X_5396010_SNP [dm6]	T	C	9.875e^-5	0.794	INTRON SK
3L	9824836	3L_9824836_SNP [dm3] 3L_9831736_SNP [dm6]	T	G	9.894e^-5	0.794	INTRON CG43897
2L	4023666	2L_4023666_SNP [dm3] 2L_4023666_SNP [dm6]	G	A	9.979e^-5	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	7729053	2R_7729053_SNP [dm3] 2R_11841548_SNP [dm6]	A	T	9.991e^-5	0.794	UPSTREAM CG34229 DOWNSTREAM S2P INTERGENIC
2L	9551241	2L_9551241_SNP [dm3] 2L_9551241_SNP [dm6]	C	G	1.000e^-4	0.794	UPSTREAM jp INTRON jp
3R	24508193	3R_24508193_SNP [dm3] 3R_28682471_SNP [dm6]	C	T	1.002e^-4	0.794	UTR_5_PRIME CG9990 INTRON CG9990	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z
3R	11707146	3R_11707146_SNP [dm3] 3R_15881424_SNP [dm6]	T	G	1.005e^-4	0.794	INTERGENIC
3R	21311871	3R_21311871_SNP [dm3] 3R_25486149_SNP [dm6]	C	T	1.012e^-4	0.794	UTR_3_PRIME Dhap-at DOWNSTREAM CG42488 & 1 other	TF binding site mE1_TFBS_cad
3L	8667656	3L_8667656_SNP [dm3] 3L_8674556_SNP [dm6]	A	T	1.016e^-4	0.794	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	9882250	3R_9882250_SNP [dm3] 3R_14056528_SNP [dm6]	A	G	1.024e^-4	0.794	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
X	2513204	X_2513204_SNP [dm3] X_2619171_SNP [dm6]	T	A	1.034e^-4	0.794	SYNONYMOUS_CODING Tsp3A UPSTREAM Seipin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	3269345	2L_3269345_SNP [dm3] 2L_3269345_SNP [dm6]	T	C	1.035e^-4	0.794	UPSTREAM CG3347 DOWNSTREAM CR44484 INTERGENIC
2L	9551237	2L_9551237_SNP [dm3] 2L_9551237_SNP [dm6]	A	C	1.038e^-4	0.794	UPSTREAM jp INTRON jp
3L	5774224	3L_5774224_SNP [dm3] 3L_5781124_SNP [dm6]	C	T	1.040e^-4	0.794	START_GAINED PGRP-LD UTR_5_PRIME PGRP-LD UTR_3_PRIME Pmi UPSTREAM PGRP-LD & 1 other INTRON PGRP-LD & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	9146522	2R_9146522_SNP [dm3] 2R_13259017_SNP [dm6]	C	G	1.048e^-4	0.794	DOWNSTREAM CG10799 INTERGENIC
2R	9419457	2R_9419457_SNP [dm3] 2R_13531952_SNP [dm6]	C	T	1.052e^-4	0.794	INTRON Vmat
3L	2319051	3L_2319051_SNP [dm3] 3L_2319051_SNP [dm6]	G	A	1.058e^-4	0.794	DOWNSTREAM CR45426 INTERGENIC
3L	11898795	3L_11898795_SNP [dm3] 3L_11905695_SNP [dm6]	T	A	1.058e^-4	0.794	INTRON CG44837
3L	9409138	3L_9409138_SNP [dm3] 3L_9416038_SNP [dm6]	T	C	1.062e^-4	0.794	SYNONYMOUS_CODING CG3982 INTRON CG3967	TF binding site mE1_TFBS_cad
3L	9409008	3L_9409008_SNP [dm3] 3L_9415908_SNP [dm6]	A	G	1.063e^-4	0.794	UTR_3_PRIME CG3982 INTRON CG3967	TF binding site mE1_TFBS_cad
3R	10270462	3R_10270462_DEL [dm3] 3R_14444740_DEL [dm6]	CT	C	1.066e^-4	0.794	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5881791	3R_5881791_SNP [dm3] 3R_10056069_SNP [dm6]	T	C	1.068e^-4	0.794	NON_SYNONYMOUS_CODING Npc2d
3R	9764150	3R_9764150_SNP [dm3] 3R_13938428_SNP [dm6]	C	T	1.068e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
2R	14762141	2R_14762141_SNP [dm3] 2R_18874636_SNP [dm6]	G	C	1.068e^-4	0.794	INTERGENIC
2L	4523353	2L_4523353_SNP [dm3] 2L_4523353_SNP [dm6]	T	C	1.070e^-4	0.794	SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad
3L	8874976	3L_8874976_MNP [dm3] 3L_8881876_MNP [dm6]	CAT	TGA	1.072e^-4	0.794	INTRON dally
3L	8875004	3L_8875004_SNP [dm3] 3L_8881904_SNP [dm6]	T	C	1.072e^-4	0.794	INTRON dally
X	22140568	X_22140568_SNP [dm3] X_22738732_SNP [dm6]	G	A	1.078e^-4	0.794	INTRON CR44997	transposable element FlyBase
3L	2317778	3L_2317778_SNP [dm3] 3L_2317778_SNP [dm6]	G	C	1.080e^-4	0.794	UPSTREAM CR45427 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	14196623	3R_14196623_SNP [dm3] 3R_18370901_SNP [dm6]	A	G	1.083e^-4	0.794	INTRON gl	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	5502830	2L_5502830_SNP [dm3] 2L_5502830_SNP [dm6]	A	G	1.090e^-4	0.794	INTERGENIC
3R	24206117	3R_24206117_SNP [dm3] 3R_28380395_SNP [dm6]	T	G	1.092e^-4	0.794	INTERGENIC
3L	4411246	3L_4411246_SNP [dm3] 3L_4411246_SNP [dm6]	G	T	1.094e^-4	0.794	INTRON DOR
2R	15569392	2R_15569392_DEL [dm3] 2R_19681887_DEL [dm6]	TCTCAAGTAT	T	1.094e^-4	0.794	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
2R	9145702	2R_9145702_SNP [dm3] 2R_13258197_SNP [dm6]	A	C	1.102e^-4	0.794	NON_SYNONYMOUS_CODING CG10799 DOWNSTREAM CG4716
2R	9419460	2R_9419460_SNP [dm3] 2R_13531955_SNP [dm6]	G	A	1.112e^-4	0.794	INTRON Vmat
2R	6297005	2R_6297005_SNP [dm3] 2R_10409500_SNP [dm6]	T	G	1.112e^-4	0.794	SYNONYMOUS_CODING CG33477 UPSTREAM CG43177 DOWNSTREAM CG33476 INTRON CG42732
X	11869377	X_11869377_SNP [dm3] X_11975344_SNP [dm6]	T	C	1.117e^-4	0.794	INTRON cac
3L	9381726	3L_9381726_SNP [dm3] 3L_9388626_SNP [dm6]	A	G	1.122e^-4	0.794	SYNONYMOUS_CODING CG4080	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	9979656	2R_9979656_SNP [dm3] 2R_14092151_SNP [dm6]	A	G	1.126e^-4	0.794	NON_SYNONYMOUS_CODING Prosap DOWNSTREAM CG42288
3L	14079083	3L_14079083_SNP [dm3] 3L_14085983_SNP [dm6]	T	G	1.130e^-4	0.794	DOWNSTREAM CG8100 INTERGENIC
2L	17644064	2L_17644064_SNP [dm3] 2L_17644064_SNP [dm6]	T	A	1.137e^-4	0.794	DOWNSTREAM CR45699 INTERGENIC
2R	6960668	2R_6960668_SNP [dm3] 2R_11073163_SNP [dm6]	C	T	1.139e^-4	0.794	INTRON luna	TF binding site mE1_TFBS_HSA
2L	3242594	2L_3242594_SNP [dm3] 2L_3242594_SNP [dm6]	G	T	1.142e^-4	0.794	INTERGENIC
2R	9269117	2R_9269117_DEL [dm3] 2R_13381612_DEL [dm6]	AAAGA	TCT	1.149e^-4	0.794	INTERGENIC
3R	12961233	3R_12961233_SNP [dm3] 3R_17135511_SNP [dm6]	G	A	1.151e^-4	0.794	UPSTREAM CG5246 DOWNSTREAM CG31267 INTERGENIC
3L	3277144	3L_3277144_SNP [dm3] 3L_3277144_SNP [dm6]	C	T	1.154e^-4	0.794	DOWNSTREAM CG14960 INTERGENIC	TF binding site mE1_TFBS_bab1
3R	6072111	3R_6072111_SNP [dm3] 3R_10246389_SNP [dm6]	T	C	1.157e^-4	0.794	NON_SYNONYMOUS_CODING CG42795
3L	12853447	3L_12853447_SNP [dm3] 3L_12860347_SNP [dm6]	G	A	1.158e^-4	0.794	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_sens
3R	10373078	3R_10373078_SNP [dm3] 3R_14547356_SNP [dm6]	G	T	1.169e^-4	0.794	INTRON Pde6
3R	25522770	3R_25522770_SNP [dm3] 3R_29697048_SNP [dm6]	G	T	1.173e^-4	0.794	DOWNSTREAM dmrt99B INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	8150892	2L_8150892_SNP [dm3] 2L_8150892_SNP [dm6]	C	A	1.178e^-4	0.794	INTRON CG8552 & 1 other
3L	4174670	3L_4174670_SNP [dm3] 3L_4174670_SNP [dm6]	G	C	1.181e^-4	0.794	SPLICE_SITE_REGION CG18675 DOWNSTREAM Ero1L & 1 other INTRON CG18675
2L	8795437	2L_8795437_SNP [dm3] 2L_8795437_SNP [dm6]	G	A	1.182e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_Kr
2L	10699105	2L_10699105_SNP [dm3] 2L_10699105_SNP [dm6]	G	A	1.183e^-4	0.794	DOWNSTREAM CR44181 & 1 other INTERGENIC
3R	17618700	3R_17618700_SNP [dm3] 3R_21792978_SNP [dm6]	T	A	1.197e^-4	0.794	INTRON CASK	TF binding site mE1_TFBS_cad
2L	4346139	2L_4346139_SNP [dm3] 2L_4346139_SNP [dm6]	T	C	1.207e^-4	0.794	DOWNSTREAM Atet INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
3L	14954367	3L_14954367_SNP [dm3] 3L_14961267_SNP [dm6]	G	C	1.208e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10200074	3L_10200074_SNP [dm3] 3L_10206974_SNP [dm6]	C	G	1.210e^-4	0.794	DOWNSTREAM CR44538 INTERGENIC
3L	8647001	3L_8647001_SNP [dm3] 3L_8653901_SNP [dm6]	C	T	1.213e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	18574885	3R_18574885_SNP [dm3] 3R_22749163_SNP [dm6]	G	A	1.214e^-4	0.794	UTR_3_PRIME rumi UPSTREAM CG31139
2R	9269128	2R_9269128_SNP [dm3] 2R_13381623_SNP [dm6]	A	T	1.235e^-4	0.794	INTERGENIC
3R	12957792	3R_12957792_SNP [dm3] 3R_17132070_SNP [dm6]	T	C	1.235e^-4	0.794	SYNONYMOUS_CODING CG4053 UPSTREAM CG31266	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	10117118	3L_10117118_SNP [dm3] 3L_10124018_SNP [dm6]	T	C	1.244e^-4	0.794	INTRON dpr6
2L	9305388	2L_9305388_SNP [dm3] 2L_9305388_SNP [dm6]	C	A	1.247e^-4	0.794	UPSTREAM CR42844 INTERGENIC
2R	18543534	2R_18543534_SNP [dm3] 2R_22656029_SNP [dm6]	G	A	1.256e^-4	0.794	SYNONYMOUS_CODING CG43326 UTR_3_PRIME CG43325 UPSTREAM CG30196 DOWNSTREAM CG43325 EXON CR45268	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	16000118	2R_16000118_SNP [dm3] 2R_20112613_SNP [dm6]	A	G	1.258e^-4	0.794	SYNONYMOUS_CODING 18w	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	14196642	3R_14196642_SNP [dm3] 3R_18370920_SNP [dm6]	A	G	1.259e^-4	0.794	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
3L	5899376	3L_5899376_SNP [dm3] 3L_5906276_SNP [dm6]	T	G	1.261e^-4	0.794	SYNONYMOUS_CODING CG10486
3L	7968774	3L_7968774_SNP [dm3] 3L_7975674_SNP [dm6]	A	T	1.264e^-4	0.794	NON_SYNONYMOUS_CODING HP4 UTR_3_PRIME HP4 UPSTREAM CG8042 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
3R	15696996	3R_15696996_SNP [dm3] 3R_19871274_SNP [dm6]	A	G	1.271e^-4	0.794	INTRON CG4562	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	5799837	3R_5799837_SNP [dm3] 3R_9974115_SNP [dm6]	T	G	1.278e^-4	0.794	INTRON Glut4EF
3L	14568570	3L_14568570_SNP [dm3] 3L_14575470_SNP [dm6]	C	T	1.279e^-4	0.794	INTERGENIC	regulatory region REDfly_CRMs
3L	8253674	3L_8253674_SNP [dm3] 3L_8260574_SNP [dm6]	T	G	1.284e^-4	0.794	INTRON Dscam4
3R	12035476	3R_12035476_SNP [dm3] 3R_16209754_SNP [dm6]	G	T	1.285e^-4	0.794	UPSTREAM CR45639 & 1 other DOWNSTREAM CR45640 EXON CR45637
3L	4709865	3L_4709865_SNP [dm3] 3L_4709865_SNP [dm6]	T	C	1.286e^-4	0.794	UTR_5_PRIME CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4709870	3L_4709870_SNP [dm3] 3L_4709870_SNP [dm6]	A	C	1.286e^-4	0.794	UTR_5_PRIME CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	5774065	3L_5774065_SNP [dm3] 3L_5780965_SNP [dm6]	C	T	1.290e^-4	0.794	SYNONYMOUS_CODING Pmi UTR_5_PRIME PGRP-LD UPSTREAM PGRP-LD & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	4523680	2L_4523680_SNP [dm3] 2L_4523680_SNP [dm6]	T	A	1.293e^-4	0.794	INTRON dp
X	771004	X_771004_SNP [dm3] X_876971_SNP [dm6]	T	A	1.301e^-4	0.794	DOWNSTREAM CG11664 INTRON CG43867
X	22298807	X_22298807_SNP [dm3] X_22896971_SNP [dm6]	C	T	1.309e^-4	0.794	INTERGENIC	transposable element FlyBase
X	5290044	X_5290044_SNP [dm3] X_5396011_SNP [dm6]	G	A	1.316e^-4	0.794	INTRON SK
X	5290049	X_5290049_SNP [dm3] X_5396016_SNP [dm6]	A	G	1.316e^-4	0.794	INTRON SK
2R	19603305	2R_19603305_SNP [dm3] 2R_23715782_SNP [dm6]	C	T	1.317e^-4	0.794	INTRON Sesn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	24205215	3R_24205215_SNP [dm3] 3R_28379493_SNP [dm6]	T	A	1.317e^-4	0.794	INTERGENIC
3R	22197816	3R_22197816_SNP [dm3] 3R_26372094_SNP [dm6]	A	T	1.318e^-4	0.794	INTERGENIC
X	11869314	X_11869314_SNP [dm3] X_11975281_SNP [dm6]	A	G	1.321e^-4	0.794	INTRON cac
3L	7799054	3L_7799054_SNP [dm3] 3L_7805954_SNP [dm6]	A	G	1.324e^-4	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
X	2731210	X_2731210_SNP [dm3] X_2837177_SNP [dm6]	G	T	1.337e^-4	0.794	INTRON kirre
2R	6037966	2R_6037966_SNP [dm3] 2R_10150461_SNP [dm6]	G	A	1.347e^-4	0.794	INTRON KCNQ
3L	5523009	3L_5523009_SNP [dm3] 3L_5529909_SNP [dm6]	A	T	1.350e^-4	0.794	UPSTREAM Lkr INTERGENIC
3R	25919178	3R_25919178_SNP [dm3] 3R_30093456_SNP [dm6]	A	G	1.350e^-4	0.794	INTRON sima
3L	3369542	3L_3369542_SNP [dm3] 3L_3369542_SNP [dm6]	T	G	1.356e^-4	0.794	UPSTREAM Drs DOWNSTREAM YT521-B INTERGENIC	regulatory region REDfly_CRMs
2R	9269124	2R_9269124_DEL [dm3] 2R_13381619_DEL [dm6]	TG	T	1.358e^-4	0.794	INTERGENIC
2R	18372002	2R_18372002_SNP [dm3] 2R_22484497_SNP [dm6]	A	T	1.360e^-4	0.794	SYNONYMOUS_CODING CG4554	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	2121447	2R_2121447_SNP [dm3] 2R_6233942_SNP [dm6]	T	C	1.360e^-4	0.794	SYNONYMOUS_CODING bin3	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	7812400	2L_7812400_SNP [dm3] 2L_7812400_SNP [dm6]	T	C	1.364e^-4	0.794	INTRON LanB1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10216408	3R_10216408_SNP [dm3] 3R_14390686_SNP [dm6]	C	A	1.365e^-4	0.794	DOWNSTREAM cv-c INTERGENIC
2L	9857685	2L_9857685_DEL [dm3] 2L_9857685_DEL [dm6]	AA	A	1.367e^-4	0.794	INTRON nAChRalpha6
3L	5774645	3L_5774645_SNP [dm3] 3L_5781545_SNP [dm6]	T	A	1.370e^-4	0.794	SPLICE_SITE_REGION PGRP-LD & 1 other UTR_5_PRIME PGRP-LD UTR_3_PRIME Pmi UPSTREAM CR45026 INTRON PGRP-LD & 1 other
2L	9551242	2L_9551242_SNP [dm3] 2L_9551242_SNP [dm6]	G	T	1.377e^-4	0.794	UPSTREAM jp INTRON jp
3L	2529099	3L_2529099_SNP [dm3] 3L_2529099_SNP [dm6]	G	A	1.378e^-4	0.794	INTRON Spn
2L	4749581	2L_4749581_SNP [dm3] 2L_4749581_SNP [dm6]	C	A	1.379e^-4	0.794	INTRON CG15630
3L	18240799	3L_18240799_SNP [dm3] 3L_18247699_SNP [dm6]	C	T	1.381e^-4	0.794	INTERGENIC
3R	14168715	3R_14168715_SNP [dm3] 3R_18342993_SNP [dm6]	T	C	1.386e^-4	0.794	INTRON CG15803
2L	6146563	2L_6146563_SNP [dm3] 2L_6146563_SNP [dm6]	A	G	1.386e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
3R	11452683	3R_11452683_SNP [dm3] 3R_15626961_SNP [dm6]	C	A	1.387e^-4	0.794	INTERGENIC
3L	12858356	3L_12858356_SNP [dm3] 3L_12865256_SNP [dm6]	C	T	1.389e^-4	0.794	INTERGENIC
3R	10192460	3R_10192460_SNP [dm3] 3R_14366738_SNP [dm6]	G	A	1.392e^-4	0.794	INTRON NK7.1	TF binding site BDTNP1_TFBS_twi
X	3427167	X_3427167_SNP [dm3] X_3533134_SNP [dm6]	T	A	1.398e^-4	0.794	INTRON CG32791
3R	628853	3R_628853_DEL [dm3] 3R_4803131_DEL [dm6]	TATTCAACGGGAAAATTTCA...	T	1.403e^-4	0.794	UPSTREAM ctrip INTRON ctrip	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3L	16887438	3L_16887438_SNP [dm3] 3L_16894338_SNP [dm6]	A	G	1.409e^-4	0.794	INTRON Lmpt
X	3921932	X_3921932_SNP [dm3] X_4027899_SNP [dm6]	G	T	1.412e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	589755	3L_589755_SNP [dm3] 3L_589755_SNP [dm6]	C	T	1.413e^-4	0.794	UPSTREAM Kah INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17427710	2R_17427710_SNP [dm3] 2R_21540205_SNP [dm6]	G	A	1.414e^-4	0.794	UPSTREAM CG33226 INTRON Egfr & 1 other	TF binding site mE1_TFBS_D mE1_TFBS_HSA
2L	9645124	2L_9645124_SNP [dm3] 2L_9645124_SNP [dm6]	A	C	1.420e^-4	0.794	SYNONYMOUS_CODING Apoltp
2L	3235299	2L_3235299_SNP [dm3] 2L_3235299_SNP [dm6]	G	A	1.421e^-4	0.794	INTERGENIC
2R	19128632	2R_19128632_DEL [dm3] 2R_23241109_DEL [dm6]	CTTTGCGGC	C	1.427e^-4	0.794	INTERGENIC
X	4564948	X_4564948_SNP [dm3] X_4670915_SNP [dm6]	A	C	1.429e^-4	0.794	INTRON rap
3L	1932061	3L_1932061_SNP [dm3] 3L_1932061_SNP [dm6]	C	T	1.450e^-4	0.794	INTRON Dbx
X	2474864	X_2474864_SNP [dm3] X_2580831_SNP [dm6]	T	C	1.452e^-4	0.794	UPSTREAM CG13759 & 1 other INTERGENIC
2R	7526499	2R_7526499_SNP [dm3] 2R_11638994_SNP [dm6]	C	T	1.453e^-4	0.794	INTRON CG9005	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	6494196	2L_6494196_SNP [dm3] 2L_6494196_SNP [dm6]	G	A	1.464e^-4	0.794	SYNONYMOUS_CODING CG9547 INTRON CG31638	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	7798990	3L_7798990_SNP [dm3] 3L_7805890_SNP [dm6]	A	C	1.468e^-4	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	5942693	2L_5942693_SNP [dm3] 2L_5942693_SNP [dm6]	A	C	1.472e^-4	0.794	UTR_3_PRIME Sfp26Ad UPSTREAM Gpdh DOWNSTREAM Sfp26Ad & 1 other
X	2474861	X_2474861_INS [dm3] X_2580828_INS [dm6]	A	ACGTG	1.472e^-4	0.794	UPSTREAM CG13759 & 1 other INTERGENIC
2R	9269137	2R_9269137_SNP [dm3] 2R_13381632_SNP [dm6]	T	A	1.482e^-4	0.794	INTERGENIC
3R	17619164	3R_17619164_SNP [dm3] 3R_21793442_SNP [dm6]	T	A	1.486e^-4	0.794	INTRON CASK	TF binding site mE1_TFBS_cad
3L	7069602	3L_7069602_SNP [dm3] 3L_7076502_SNP [dm6]	C	G	1.487e^-4	0.794	INTRON CG8641
3R	24205346	3R_24205346_SNP [dm3] 3R_28379624_SNP [dm6]	A	T	1.493e^-4	0.794	INTERGENIC
3R	22279197	3R_22279197_DEL [dm3] 3R_26453475_DEL [dm6]	AGTGATCGT	A	1.505e^-4	0.794	INTRON CG5447
2L	6146562	2L_6146562_SNP [dm3] 2L_6146562_SNP [dm6]	G	T	1.507e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
3R	9766072	3R_9766072_SNP [dm3] 3R_13940350_SNP [dm6]	C	T	1.508e^-4	0.794	INTERGENIC
2L	13806482	2L_13806482_SNP [dm3] 2L_13806482_SNP [dm6]	C	T	1.512e^-4	0.794	INTRON CAH1
3L	17896352	3L_17896352_SNP [dm3] 3L_17903252_SNP [dm6]	T	A	1.520e^-4	0.794	INTRON Prestin
X	5980847	X_5980847_SNP [dm3] X_6086814_SNP [dm6]	A	G	1.528e^-4	0.794	SYNONYMOUS_CODING raptor INTRON Mipp2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	14767929	2L_14767929_INS [dm3] 2L_14767929_INS [dm6]	T	TTTAT	1.538e^-4	0.794	DOWNSTREAM CG4701 INTERGENIC
2L	9491463	2L_9491463_SNP [dm3] 2L_9491463_SNP [dm6]	G	C	1.543e^-4	0.794	UTR_3_PRIME Gdi DOWNSTREAM Gdi
3R	23952142	3R_23952142_SNP [dm3] 3R_28126420_SNP [dm6]	T	C	1.549e^-4	0.794	INTERGENIC
2L	2649508	2L_2649508_SNP [dm3] 2L_2649508_SNP [dm6]	G	A	1.550e^-4	0.794	SYNONYMOUS_CODING CG33125 UTR_3_PRIME CG33125
3R	10693905	3R_10693905_SNP [dm3] 3R_14868183_SNP [dm6]	A	C	1.553e^-4	0.794	INTRON btsz
3L	3368510	3L_3368510_SNP [dm3] 3L_3368510_SNP [dm6]	C	T	1.565e^-4	0.794	DOWNSTREAM kst INTERGENIC
2L	2398989	2L_2398989_SNP [dm3] 2L_2398989_SNP [dm6]	G	A	1.566e^-4	0.794	INTRON VGlut
3L	6828135	3L_6828135_SNP [dm3] 3L_6835035_SNP [dm6]	C	A	1.568e^-4	0.794	INTERGENIC
3R	6933536	3R_6933536_SNP [dm3] 3R_11107814_SNP [dm6]	T	C	1.581e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	15811757	X_15811757_SNP [dm3] X_15917724_SNP [dm6]	C	T	1.584e^-4	0.794	SYNONYMOUS_CODING CG8909	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	15432992	3R_15432992_SNP [dm3] 3R_19607270_SNP [dm6]	T	C	1.586e^-4	0.794	UTR_5_PRIME CG17751 DOWNSTREAM CG7342
2R	17745867	2R_17745867_SNP [dm3] 2R_21858362_SNP [dm6]	C	G	1.587e^-4	0.794	INTERGENIC
2L	6515306	2L_6515306_SNP [dm3] 2L_6515306_SNP [dm6]	T	A	1.590e^-4	0.794	INTRON CG31637
3L	20088088	3L_20088088_SNP [dm3] 3L_20094988_SNP [dm6]	C	A	1.598e^-4	0.794	INTERGENIC
3L	15477355	3L_15477355_SNP [dm3] 3L_15484255_SNP [dm6]	C	A	1.599e^-4	0.794	DOWNSTREAM Ran-like INTERGENIC
3R	22615468	3R_22615468_SNP [dm3] 3R_26789746_SNP [dm6]	A	C	1.601e^-4	0.794	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_twi
3L	9566829	3L_9566829_SNP [dm3] 3L_9573729_SNP [dm6]	T	C	1.608e^-4	0.794	INTRON CG42673
X	15269693	X_15269693_SNP [dm3] X_15375660_SNP [dm6]	T	C	1.611e^-4	0.794	INTRON acj6
3R	10038759	3R_10038759_SNP [dm3] 3R_14213037_SNP [dm6]	T	A	1.614e^-4	0.794	INTRON Dop1R1
3R	14196634	3R_14196634_SNP [dm3] 3R_18370912_SNP [dm6]	A	C	1.633e^-4	0.794	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
3R	21330598	3R_21330598_SNP [dm3] 3R_25504876_SNP [dm6]	A	C	1.638e^-4	0.794	UPSTREAM CG5107 DOWNSTREAM CR45651 INTERGENIC	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	18746416	3R_18746416_SNP [dm3] 3R_22920694_SNP [dm6]	G	A	1.643e^-4	0.794	INTRON klg
2R	11618430	2R_11618430_SNP [dm3] 2R_15730925_SNP [dm6]	T	G	1.651e^-4	0.794	INTRON CG30089	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	11618438	2R_11618438_SNP [dm3] 2R_15730933_SNP [dm6]	T	A	1.651e^-4	0.794	INTRON CG30089	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	2671684	2L_2671684_SNP [dm3] 2L_2671684_SNP [dm6]	C	T	1.657e^-4	0.794	SYNONYMOUS_CODING Gr23a INTRON Gr23a
2R	18638347	2R_18638347_SNP [dm3] 2R_22750842_SNP [dm6]	G	T	1.666e^-4	0.794	INTRON CG42260	TF binding site mE1_TFBS_inv
3L	9248812	3L_9248812_SNP [dm3] 3L_9255712_SNP [dm6]	A	G	1.667e^-4	0.794	INTRON GluRIB
2R	7549434	2R_7549434_SNP [dm3] 2R_11661929_SNP [dm6]	T	G	1.667e^-4	0.794	INTRON Roc2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	6323061	X_6323061_DEL [dm3] X_6429028_DEL [dm6]	AAA	G	1.678e^-4	0.794	INTRON CG42340
2L	6605566	2L_6605566_SNP [dm3] 2L_6605566_SNP [dm6]	C	T	1.681e^-4	0.794	INTERGENIC
2L	1310321	2L_1310321_SNP [dm3] 2L_1310321_SNP [dm6]	T	G	1.684e^-4	0.794	INTERGENIC
3R	14455070	3R_14455070_INS [dm3] 3R_18629348_INS [dm6]	A	AGA	1.685e^-4	0.794	UTR_3_PRIME CG14301 UPSTREAM tRNA:CR31228 INTRON qin
3L	2643721	3L_2643721_SNP [dm3] 3L_2643721_SNP [dm6]	T	A	1.702e^-4	0.794	UPSTREAM CG14949 INTERGENIC
3R	11598592	3R_11598592_SNP [dm3] 3R_15772870_SNP [dm6]	A	G	1.706e^-4	0.794	INTERGENIC
2R	8925526	2R_8925526_SNP [dm3] 2R_13038021_SNP [dm6]	C	A	1.715e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	1057236	2L_1057236_SNP [dm3] 2L_1057236_SNP [dm6]	G	A	1.716e^-4	0.794	INTRON S	TF binding site mE1_TFBS_sens
2L	4345933	2L_4345933_SNP [dm3] 2L_4345933_SNP [dm6]	A	G	1.725e^-4	0.794	DOWNSTREAM Atet INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
3R	14196633	3R_14196633_SNP [dm3] 3R_18370911_SNP [dm6]	G	A	1.730e^-4	0.794	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
3L	5775630	3L_5775630_SNP [dm3] 3L_5782530_SNP [dm6]	C	G	1.738e^-4	0.794	DOWNSTREAM Cralbp INTRON Pmi & 1 other
2R	10307166	2R_10307166_SNP [dm3] 2R_14419661_SNP [dm6]	G	C	1.739e^-4	0.794	UPSTREAM CG17386 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	10956446	2R_10956446_SNP [dm3] 2R_15068941_SNP [dm6]	G	A	1.742e^-4	0.794	INTERGENIC
3L	4751644	3L_4751644_INS [dm3] 3L_4751644_INS [dm6]	G	GATCCAGCGG	1.745e^-4	0.794	DOWNSTREAM CG12493 INTRON RhoGEF64C
3L	14134571	3L_14134571_SNP [dm3] 3L_14141471_SNP [dm6]	G	T	1.748e^-4	0.794	INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2L	9445547	2L_9445547_SNP [dm3] 2L_9445547_SNP [dm6]	A	T	1.754e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	9445562	2L_9445562_SNP [dm3] 2L_9445562_SNP [dm6]	T	A	1.754e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
2R	11979427	2R_11979427_SNP [dm3] 2R_16091922_SNP [dm6]	C	A	1.755e^-4	0.794	INTRON Dg
2L	14138128	2L_14138128_SNP [dm3] 2L_14138128_SNP [dm6]	T	C	1.762e^-4	0.794	INTRON CG17341	TF binding site mE1_TFBS_cad
2L	7812811	2L_7812811_SNP [dm3] 2L_7812811_SNP [dm6]	A	T	1.773e^-4	0.794	INTRON LanB1	TF binding site BDTNP1_TFBS_twi
2R	18450347	2R_18450347_SNP [dm3] 2R_22562842_SNP [dm6]	G	A	1.778e^-4	0.794	UTR_3_PRIME CG11362 UPSTREAM px DOWNSTREAM dnr1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	6277622	X_6277622_SNP [dm3] X_6383589_SNP [dm6]	A	G	1.791e^-4	0.794	UPSTREAM CG33664 INTERGENIC
3L	5771288	3L_5771288_SNP [dm3] 3L_5778188_SNP [dm6]	A	G	1.793e^-4	0.794	SYNONYMOUS_CODING Myt1 UPSTREAM vito
3L	7799050	3L_7799050_SNP [dm3] 3L_7805950_SNP [dm6]	G	C	1.794e^-4	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3L	11675600	3L_11675600_SNP [dm3] 3L_11682500_SNP [dm6]	C	T	1.796e^-4	0.794	SYNONYMOUS_CODING TfIIEalpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	15884156	3L_15884156_INS [dm3] 3L_15891056_INS [dm6]	C	GCATACTATA	1.800e^-4	0.794	INTRON pHCl
3R	24205532	3R_24205532_SNP [dm3] 3R_28379810_SNP [dm6]	T	G	1.813e^-4	0.794	INTERGENIC
3R	23477229	3R_23477229_SNP [dm3] 3R_27651507_SNP [dm6]	T	G	1.818e^-4	0.794	UTR_3_PRIME tau UPSTREAM tau INTRON tau
2L	9445549	2L_9445549_SNP [dm3] 2L_9445549_SNP [dm6]	T	A	1.819e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	9445497	2L_9445497_SNP [dm3] 2L_9445497_SNP [dm6]	C	T	1.824e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	3646214	2L_3646214_SNP [dm3] 2L_3646214_SNP [dm6]	G	A	1.828e^-4	0.794	UPSTREAM for INTRON for
3L	2232604	3L_2232604_SNP [dm3] 3L_2232604_SNP [dm6]	A	T	1.828e^-4	0.794	SYNONYMOUS_CODING Oseg2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	7808830	2L_7808830_SNP [dm3] 2L_7808830_SNP [dm6]	A	G	1.838e^-4	0.794	INTRON cdc14	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	5995783	3R_5995783_SNP [dm3] 3R_10170061_SNP [dm6]	T	G	1.846e^-4	0.794	INTRON Best1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
X	8466093	X_8466093_SNP [dm3] X_8572060_SNP [dm6]	G	C	1.849e^-4	0.794	INTRON spirit	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
2L	6335458	2L_6335458_SNP [dm3] 2L_6335458_SNP [dm6]	C	G	1.850e^-4	0.794	SYNONYMOUS_CODING Pez	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	6859385	3R_6859385_SNP [dm3] 3R_11033663_SNP [dm6]	T	G	1.857e^-4	0.794	INTRON CG34114
3R	23952118	3R_23952118_SNP [dm3] 3R_28126396_SNP [dm6]	G	C	1.858e^-4	0.794	INTERGENIC
3L	9944059	3L_9944059_SNP [dm3] 3L_9950959_SNP [dm6]	C	T	1.859e^-4	0.794	INTRON CG34356
3L	2318985	3L_2318985_SNP [dm3] 3L_2318985_SNP [dm6]	A	G	1.859e^-4	0.794	DOWNSTREAM CR45426 INTERGENIC
2L	17560184	2L_17560184_SNP [dm3] 2L_17560184_SNP [dm6]	T	A	1.863e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
2L	5220293	2L_5220293_SNP [dm3] 2L_5220293_SNP [dm6]	C	T	1.865e^-4	0.794	NON_SYNONYMOUS_CODING tkv	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	21279837	3R_21279837_SNP [dm3] 3R_25454115_SNP [dm6]	T	C	1.869e^-4	0.794	INTRON Fur1
X	10847293	X_10847293_SNP [dm3] X_10953260_SNP [dm6]	T	A	1.870e^-4	0.794	UPSTREAM Rab9Fb & 1 other INTRON Myo10A
3R	24205454	3R_24205454_SNP [dm3] 3R_28379732_SNP [dm6]	C	T	1.875e^-4	0.794	INTERGENIC
2L	11740849	2L_11740849_SNP [dm3] 2L_11740849_SNP [dm6]	C	T	1.881e^-4	0.794	INTRON Vha100-5	TF binding site mE1_TFBS_cad
3L	19497511	3L_19497511_SNP [dm3] 3L_19504411_SNP [dm6]	C	T	1.881e^-4	0.794	UPSTREAM CG9452 DOWNSTREAM CR45731 INTERGENIC
3L	450468	3L_450468_SNP [dm3] 3L_450468_SNP [dm6]	G	T	1.890e^-4	0.794	INTRON klar
2L	16171331	2L_16171331_SNP [dm3] 2L_16171331_SNP [dm6]	G	T	1.906e^-4	0.794	INTRON Ca-alpha1D
2R	14272034	2R_14272034_SNP [dm3] 2R_18384529_SNP [dm6]	T	A	1.910e^-4	0.794	UPSTREAM CG18107 DOWNSTREAM CG15067 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	25919024	3R_25919024_SNP [dm3] 3R_30093302_SNP [dm6]	G	A	1.916e^-4	0.794	INTRON sima
X	5290050	X_5290050_SNP [dm3] X_5396017_SNP [dm6]	A	C	1.918e^-4	0.794	INTRON SK
3R	14196912	3R_14196912_SNP [dm3] 3R_18371190_SNP [dm6]	T	C	1.923e^-4	0.794	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	17620994	2L_17620994_SNP [dm3] 2L_17620994_SNP [dm6]	A	G	1.931e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_Trl
3L	9715958	3L_9715958_SNP [dm3] 3L_9722858_SNP [dm6]	A	G	1.934e^-4	0.794	SYNONYMOUS_CODING nbs UPSTREAM defl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	11452718	3L_11452718_SNP [dm3] 3L_11459618_SNP [dm6]	G	T	1.936e^-4	0.794	UTR_3_PRIME CG7551	TF binding site mE1_TFBS_inv
3L	10200057	3L_10200057_SNP [dm3] 3L_10206957_SNP [dm6]	A	T	1.942e^-4	0.794	DOWNSTREAM CR44538 INTERGENIC
3L	3263234	3L_3263234_SNP [dm3] 3L_3263234_SNP [dm6]	T	C	1.954e^-4	0.794	INTRON ckd
3R	15254317	3R_15254317_DEL [dm3] 3R_19428595_DEL [dm6]	GAT	G	1.955e^-4	0.794	INTRON CG31221
3R	21361247	3R_21361247_SNP [dm3] 3R_25535525_SNP [dm6]	A	T	1.960e^-4	0.794	INTRON msi
3L	5773754	3L_5773754_SNP [dm3] 3L_5780654_SNP [dm6]	G	A	1.961e^-4	0.794	SYNONYMOUS_CODING Pmi UTR_5_PRIME PGRP-LD UPSTREAM PGRP-LD EXON CR45026	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	9948936	3L_9948936_SNP [dm3] 3L_9955836_SNP [dm6]	C	T	1.961e^-4	0.794	INTRON CG34356
3L	7799243	3L_7799243_SNP [dm3] 3L_7806143_SNP [dm6]	T	G	1.961e^-4	0.794	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3R	25068827	3R_25068827_SNP [dm3] 3R_29243105_SNP [dm6]	G	A	1.963e^-4	0.794	INTRON CG31445
2L	9490871	2L_9490871_SNP [dm3] 2L_9490871_SNP [dm6]	G	A	1.967e^-4	0.794	DOWNSTREAM Gdi INTERGENIC
X	2874521	X_2874521_DEL [dm3] X_2980488_DEL [dm6]	TTTA	T	1.970e^-4	0.794	INTRON kirre	regulatory region REDfly_CRMs
3L	14569238	3L_14569238_SNP [dm3] 3L_14576138_SNP [dm6]	T	G	1.973e^-4	0.794	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	9445625	2L_9445625_SNP [dm3] 2L_9445625_SNP [dm6]	C	T	1.984e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
2R	6297008	2R_6297008_SNP [dm3] 2R_10409503_SNP [dm6]	G	C	1.986e^-4	0.794	SYNONYMOUS_CODING CG33477 UPSTREAM CG43177 DOWNSTREAM CG33476 INTRON CG42732
3L	14569458	3L_14569458_SNP [dm3] 3L_14576358_SNP [dm6]	A	G	1.987e^-4	0.794	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	16175402	2R_16175402_SNP [dm3] 2R_20287897_SNP [dm6]	C	T	1.992e^-4	0.794	NON_SYNONYMOUS_CODING CG34199 UPSTREAM CG16868 DOWNSTREAM Cpr56F
3R	19446955	3R_19446955_INS [dm3] 3R_23621233_INS [dm6]	C	CCACC	1.992e^-4	0.794	INTRON CG31145
2L	5942695	2L_5942695_SNP [dm3] 2L_5942695_SNP [dm6]	T	G	2.005e^-4	0.794	UTR_3_PRIME Sfp26Ad UPSTREAM Gpdh DOWNSTREAM Sfp26Ad & 1 other
2L	7664189	2L_7664189_SNP [dm3] 2L_7664189_SNP [dm6]	G	A	2.008e^-4	0.794	INTRON Slob
2R	6641274	2R_6641274_SNP [dm3] 2R_10753769_SNP [dm6]	T	G	2.011e^-4	0.794	INTRON CG33144
3L	6391561	3L_6391561_SNP [dm3] 3L_6398461_SNP [dm6]	C	A	2.014e^-4	0.794	INTERGENIC
3L	10694897	3L_10694897_SNP [dm3] 3L_10701797_SNP [dm6]	T	A	2.015e^-4	0.794	INTERGENIC
3R	10224611	3R_10224611_SNP [dm3] 3R_14398889_SNP [dm6]	T	G	2.017e^-4	0.794	INTRON cv-c
3L	2392244	3L_2392244_SNP [dm3] 3L_2392244_SNP [dm6]	A	C	2.018e^-4	0.794	INTRON CG45186
3L	6072114	3L_6072114_SNP [dm3] 3L_6079014_SNP [dm6]	T	C	2.023e^-4	0.794	SYNONYMOUS_CODING CG6619	TF binding site mE1_TFBS_cad
3L	15889043	3L_15889043_SNP [dm3] 3L_15895943_SNP [dm6]	T	C	2.030e^-4	0.794	INTRON pHCl
X	22139776	X_22139776_SNP [dm3] X_22737940_SNP [dm6]	A	G	2.033e^-4	0.794	INTRON CR44997
2L	7493359	2L_7493359_SNP [dm3] 2L_7493359_SNP [dm6]	C	G	2.036e^-4	0.794	INTRON Ziz
3R	15736319	3R_15736319_SNP [dm3] 3R_19910597_SNP [dm6]	A	T	2.045e^-4	0.794	START_GAINED RhoGAP92B UTR_5_PRIME RhoGAP92B UPSTREAM CR45048 INTRON RhoGAP92B	TF binding site mE1_TFBS_HSA
X	3428378	X_3428378_SNP [dm3] X_3534345_SNP [dm6]	C	T	2.062e^-4	0.794	INTRON CG32791	TF binding site mE1_TFBS_inv
2L	7461999	2L_7461999_SNP [dm3] 2L_7461999_SNP [dm6]	T	G	2.066e^-4	0.794	NON_SYNONYMOUS_CODING Gr28b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	15254280	3R_15254280_SNP [dm3] 3R_19428558_SNP [dm6]	A	T	2.071e^-4	0.794	INTRON CG31221
3L	16137545	3L_16137545_SNP [dm3] 3L_16144445_SNP [dm6]	A	C	2.072e^-4	0.794	UPSTREAM CG5151 & 1 other INTRON CG5151
3L	4411240	3L_4411240_SNP [dm3] 3L_4411240_SNP [dm6]	T	C	2.073e^-4	0.794	INTRON DOR
3L	18446458	3L_18446458_SNP [dm3] 3L_18453358_SNP [dm6]	C	G	2.077e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	11551149	3L_11551149_INS [dm3] 3L_11558049_INS [dm6]	A	TTTTTT	2.081e^-4	0.794	INTRON Mob2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
2R	17975882	2R_17975882_SNP [dm3] 2R_22088377_SNP [dm6]	C	G	2.085e^-4	0.794	UPSTREAM CG13502 INTRON CG13502
3L	23141225	3L_23141225_SNP [dm3] 3L_23148125_SNP [dm6]	C	T	2.088e^-4	0.794	NON_SYNONYMOUS_CODING CG32350
2L	12099281	2L_12099281_SNP [dm3] 2L_12099281_SNP [dm6]	C	T	2.096e^-4	0.794	SYNONYMOUS_CODING Ced-12	TF binding site mE1_TFBS_chinmo
2R	16006192	2R_16006192_SNP [dm3] 2R_20118687_SNP [dm6]	C	G	2.102e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi
3L	11452598	3L_11452598_SNP [dm3] 3L_11459498_SNP [dm6]	C	T	2.102e^-4	0.794	SYNONYMOUS_CODING CG7551	TF binding site mE1_TFBS_inv
2L	7493065	2L_7493065_SNP [dm3] 2L_7493065_SNP [dm6]	A	G	2.107e^-4	0.794	INTRON Ziz
3L	14569437	3L_14569437_SNP [dm3] 3L_14576337_SNP [dm6]	A	G	2.124e^-4	0.794	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	4967503	3R_4967503_SNP [dm3] 3R_9141781_SNP [dm6]	A	T	2.128e^-4	0.794	INTRON pum	TF binding site BDTNP1_TFBS_twi
2L	17200898	2L_17200898_SNP [dm3] 2L_17200898_SNP [dm6]	A	T	2.138e^-4	0.794	INTRON beat-IIIc	TF binding site mE1_TFBS_inv
2R	7549768	2R_7549768_SNP [dm3] 2R_11662263_SNP [dm6]	A	G	2.155e^-4	0.794	INTRON Roc2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	22446117	3R_22446117_SNP [dm3] 3R_26620395_SNP [dm6]	C	A	2.161e^-4	0.794	DOWNSTREAM TwdlP & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	10369530	3R_10369530_SNP [dm3] 3R_14543808_SNP [dm6]	C	G	2.165e^-4	0.794	INTRON Pde6
2L	7459706	2L_7459706_SNP [dm3] 2L_7459706_SNP [dm6]	A	T	2.170e^-4	0.794	UPSTREAM Gr28b INTRON Gr28b
3R	22608899	3R_22608899_SNP [dm3] 3R_26783177_SNP [dm6]	G	A	2.170e^-4	0.794	DOWNSTREAM CG42789 INTERGENIC	TF binding site mE1_TFBS_Kr
3R	10880752	3R_10880752_INS [dm3] 3R_15055030_INS [dm6]	T	TT	2.171e^-4	0.794	UTR_3_PRIME dpr9
X	3142787	X_3142787_INS [dm3] X_3248754_INS [dm6]	G	GCTG	2.178e^-4	0.794	CODON_INSERTION Pig1 UPSTREAM Sgs4 INTRON dnc
3R	24205244	3R_24205244_SNP [dm3] 3R_28379522_SNP [dm6]	C	A	2.179e^-4	0.794	INTERGENIC
3L	17027644	3L_17027644_SNP [dm3] 3L_17034544_SNP [dm6]	G	A	2.193e^-4	0.794	UPSTREAM CR43250 INTERGENIC
3R	15254315	3R_15254315_INS [dm3] 3R_19428593_INS [dm6]	G	GA	2.198e^-4	0.794	INTRON CG31221
3R	6933454	3R_6933454_SNP [dm3] 3R_11107732_SNP [dm6]	A	T	2.200e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	2477898	3L_2477898_SNP [dm3] 3L_2477898_SNP [dm6]	G	A	2.213e^-4	0.794	SYNONYMOUS_CODING Cyp4d20 INTRON CG45186	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5942667	2L_5942667_SNP [dm3] 2L_5942667_SNP [dm6]	T	C	2.213e^-4	0.794	UTR_3_PRIME Sfp26Ad UPSTREAM Gpdh DOWNSTREAM Sfp26Ad & 1 other
3R	3139044	3R_3139044_SNP [dm3] 3R_7313322_SNP [dm6]	G	T	2.215e^-4	0.794	UPSTREAM CR44334 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	3269287	2L_3269287_SNP [dm3] 2L_3269287_SNP [dm6]	C	T	2.216e^-4	0.794	UPSTREAM CG3347 DOWNSTREAM CR44484 INTERGENIC
X	16055500	X_16055500_SNP [dm3] X_16161467_SNP [dm6]	G	A	2.222e^-4	0.794	INTERGENIC
3L	2392197	3L_2392197_SNP [dm3] 3L_2392197_SNP [dm6]	C	A	2.226e^-4	0.794	INTRON CG45186
3R	5802465	3R_5802465_SNP [dm3] 3R_9976743_SNP [dm6]	G	C	2.228e^-4	0.794	INTRON Glut4EF
3R	12246604	3R_12246604_DEL [dm3] 3R_16420882_DEL [dm6]	AA	A	2.231e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	6816645	3L_6816645_SNP [dm3] 3L_6823545_SNP [dm6]	A	G	2.231e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2671530	2L_2671530_SNP [dm3] 2L_2671530_SNP [dm6]	C	G	2.240e^-4	0.794	NON_SYNONYMOUS_CODING Gr23a INTRON Gr23a	TF binding site mE1_TFBS_sens
3R	15416677	3R_15416677_SNP [dm3] 3R_19590955_SNP [dm6]	C	T	2.240e^-4	0.794	SPLICE_SITE_REGION Dys INTRON Dys	TF binding site mE1_TFBS_cad
2R	7721291	2R_7721291_SNP [dm3] 2R_11833786_SNP [dm6]	A	T	2.243e^-4	0.794	INTRON Sobp
3L	4436036	3L_4436036_SNP [dm3] 3L_4436036_SNP [dm6]	C	T	2.245e^-4	0.794	UPSTREAM CG15021 DOWNSTREAM nAChRbeta1 INTERGENIC
3L	10690739	3L_10690739_SNP [dm3] 3L_10697639_SNP [dm6]	T	A	2.253e^-4	0.794	UPSTREAM NijA INTERGENIC
3R	24174339	3R_24174339_SNP [dm3] 3R_28348617_SNP [dm6]	T	C	2.257e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	8730142	2R_8730142_SNP [dm3] 2R_12842637_SNP [dm6]	G	C	2.259e^-4	0.794	UPSTREAM Or49b & 1 other INTERGENIC
3L	6687823	3L_6687823_DEL [dm3] 3L_6694723_DEL [dm6]	TTGGGCTCAT	T	2.261e^-4	0.794	INTRON SP1173
3R	20707001	3R_20707001_SNP [dm3] 3R_24881279_SNP [dm6]	T	A	2.261e^-4	0.794	UTR_3_PRIME CG11089 DOWNSTREAM CG31121
3L	8576888	3L_8576888_SNP [dm3] 3L_8583788_SNP [dm6]	G	T	2.261e^-4	0.794	INTRON CG43078
3L	10206228	3L_10206228_SNP [dm3] 3L_10213128_SNP [dm6]	G	A	2.262e^-4	0.794	INTERGENIC
2L	5942691	2L_5942691_SNP [dm3] 2L_5942691_SNP [dm6]	A	C	2.273e^-4	0.794	UTR_3_PRIME Sfp26Ad UPSTREAM Gpdh DOWNSTREAM Sfp26Ad & 1 other
X	6279531	X_6279531_SNP [dm3] X_6385498_SNP [dm6]	C	A	2.280e^-4	0.794	DOWNSTREAM CG33664 INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	14057321	3R_14057321_SNP [dm3] 3R_18231599_SNP [dm6]	T	C	2.281e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	24205719	3R_24205719_SNP [dm3] 3R_28379997_SNP [dm6]	G	A	2.283e^-4	0.794	INTERGENIC
2L	9362077	2L_9362077_SNP [dm3] 2L_9362077_SNP [dm6]	T	A	2.287e^-4	0.794	INTERGENIC
2R	6868664	2R_6868664_DEL [dm3] 2R_10981159_DEL [dm6]	TACTG	T	2.288e^-4	0.794	UTR_3_PRIME luna
3R	5802792	3R_5802792_SNP [dm3] 3R_9977070_SNP [dm6]	G	T	2.294e^-4	0.794	INTRON Glut4EF
2L	9445552	2L_9445552_SNP [dm3] 2L_9445552_SNP [dm6]	A	C	2.296e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
2L	9445566	2L_9445566_SNP [dm3] 2L_9445566_SNP [dm6]	C	T	2.296e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
3R	14662759	3R_14662759_SNP [dm3] 3R_18837037_SNP [dm6]	G	A	2.298e^-4	0.794	INTRON CG18208
2L	9445602	2L_9445602_SNP [dm3] 2L_9445602_SNP [dm6]	A	C	2.301e^-4	0.794	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
3L	9777329	3L_9777329_SNP [dm3] 3L_9784229_SNP [dm6]	T	G	2.301e^-4	0.794	SYNONYMOUS_CODING CG8177	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	16054881	2L_16054881_SNP [dm3] 2L_16054881_SNP [dm6]	G	A	2.312e^-4	0.794	INTRON beat-Ia
3L	9384983	3L_9384983_SNP [dm3] 3L_9391883_SNP [dm6]	C	A	2.317e^-4	0.794	INTRON CG4080	TF binding site BDTNP1_TFBS_dl
3R	11998893	3R_11998893_SNP [dm3] 3R_16173171_SNP [dm6]	A	G	2.318e^-4	0.794	INTRON CG8925	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	11223940	3L_11223940_SNP [dm3] 3L_11230840_SNP [dm6]	A	G	2.328e^-4	0.794	DOWNSTREAM CR45405 & 1 other INTERGENIC
X	5290052	X_5290052_SNP [dm3] X_5396019_SNP [dm6]	T	A	2.331e^-4	0.794	INTRON SK
3L	4177741	3L_4177741_SNP [dm3] 3L_4177741_SNP [dm6]	C	T	2.336e^-4	0.794	UTR_5_PRIME Teh4 INTRON CG18675	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	8633767	3L_8633767_SNP [dm3] 3L_8640667_SNP [dm6]	G	A	2.337e^-4	0.794	SYNONYMOUS_CODING Cpr66D
3L	9948924	3L_9948924_SNP [dm3] 3L_9955824_SNP [dm6]	C	T	2.342e^-4	0.794	INTRON CG34356
3R	14196902	3R_14196902_SNP [dm3] 3R_18371180_SNP [dm6]	A	G	2.342e^-4	0.794	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	27232146	3R_27232146_SNP [dm3] 3R_31406424_SNP [dm6]	T	A	2.345e^-4	0.794	UPSTREAM CG11337 INTRON Gprk2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2L	18889752	2L_18889752_SNP [dm3] 2L_18889752_SNP [dm6]	G	A	2.348e^-4	0.794	INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_cad
3R	20706983	3R_20706983_SNP [dm3] 3R_24881261_SNP [dm6]	G	A	2.352e^-4	0.794	UTR_3_PRIME CG11089 DOWNSTREAM CG31121
X	21283478	X_21283478_SNP [dm3] X_21412451_SNP [dm6]	A	G	2.354e^-4	0.794	INTERGENIC
X	13277783	X_13277783_SNP [dm3] X_13383750_SNP [dm6]	A	T	2.359e^-4	0.794	INTRON Rbp1-like	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	7688455	2R_7688455_SNP [dm3] 2R_11800950_SNP [dm6]	C	T	2.370e^-4	0.794	INTRON ths	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	3939669	2L_3939669_SNP [dm3] 2L_3939669_SNP [dm6]	C	A	2.375e^-4	0.794	INTRON fred
2R	17721362	2R_17721362_SNP [dm3] 2R_21833857_SNP [dm6]	A	G	2.379e^-4	0.794	UPSTREAM CG34040 DOWNSTREAM CG4363 INTERGENIC
3R	10766223	3R_10766223_SNP [dm3] 3R_14940501_SNP [dm6]	C	A	2.386e^-4	0.794	INTERGENIC
2R	10956560	2R_10956560_INS [dm3] 2R_15069055_INS [dm6]	A	AA	2.386e^-4	0.794	INTERGENIC
2R	15143960	2R_15143960_SNP [dm3] 2R_19256455_SNP [dm6]	G	A	2.386e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA
3L	5775278	3L_5775278_SNP [dm3] 3L_5782178_SNP [dm6]	C	G	2.389e^-4	0.794	SYNONYMOUS_CODING PGRP-LD UTR_3_PRIME Pmi
X	14865109	X_14865109_SNP [dm3] X_14971076_SNP [dm6]	C	T	2.391e^-4	0.794	INTRON eag	TF binding site BDTNP1_TFBS_dl
2L	19478797	2L_19478797_SNP [dm3] 2L_19478797_SNP [dm6]	A	T	2.407e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
X	11051086	X_11051086_SNP [dm3] X_11157053_SNP [dm6]	T	C	2.419e^-4	0.794	NON_SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_inv mE1_TFBS_sens
3L	5146839	3L_5146839_SNP [dm3] 3L_5153739_SNP [dm6]	T	A	2.419e^-4	0.794	SYNONYMOUS_CODING Srp54k	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	9882364	3R_9882364_SNP [dm3] 3R_14056642_SNP [dm6]	T	C	2.429e^-4	0.794	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	4751652	3L_4751652_SNP [dm3] 3L_4751652_SNP [dm6]	G	A	2.429e^-4	0.794	DOWNSTREAM CG12493 INTRON RhoGEF64C
3R	10224592	3R_10224592_SNP [dm3] 3R_14398870_SNP [dm6]	G	A	2.438e^-4	0.794	INTRON cv-c
3L	9733963	3L_9733963_SNP [dm3] 3L_9740863_SNP [dm6]	T	A	2.440e^-4	0.794	UPSTREAM CR44348 INTRON CG42268
3L	3348952	3L_3348952_SNP [dm3] 3L_3348952_SNP [dm6]	C	T	2.440e^-4	0.794	INTRON kst	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10183714	3R_10183714_SNP [dm3] 3R_14357992_SNP [dm6]	C	T	2.443e^-4	0.794	DOWNSTREAM CG31320 INTRON NK7.1
2R	14383296	2R_14383296_SNP [dm3] 2R_18495791_SNP [dm6]	A	C	2.448e^-4	0.794	INTRON CG30116
3L	995303	3L_995303_SNP [dm3] 3L_995303_SNP [dm6]	C	T	2.452e^-4	0.794	SYNONYMOUS_CODING CG12038 DOWNSTREAM trio	TF binding site mE1_TFBS_cad
3R	18895583	3R_18895583_SNP [dm3] 3R_23069861_SNP [dm6]	G	C	2.460e^-4	0.794	DOWNSTREAM CG13830 INTERGENIC
3L	8645756	3L_8645756_SNP [dm3] 3L_8652656_SNP [dm6]	G	A	2.464e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
3L	13010086	3L_13010086_SNP [dm3] 3L_13016986_SNP [dm6]	C	T	2.471e^-4	0.794	DOWNSTREAM mRpL20 & 1 other INTERGENIC	TF binding site mE1_TFBS_Ubx
3L	11452722	3L_11452722_SNP [dm3] 3L_11459622_SNP [dm6]	T	C	2.471e^-4	0.794	UTR_3_PRIME CG7551	TF binding site mE1_TFBS_inv
2L	4346540	2L_4346540_SNP [dm3] 2L_4346540_SNP [dm6]	G	A	2.477e^-4	0.794	UPSTREAM CR44697 DOWNSTREAM Atet INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
3L	11452752	3L_11452752_SNP [dm3] 3L_11459652_SNP [dm6]	A	T	2.478e^-4	0.794	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
2R	12665740	2R_12665740_SNP [dm3] 2R_16778235_SNP [dm6]	A	G	2.479e^-4	0.794	UPSTREAM Vkor INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15340648	3R_15340648_SNP [dm3] 3R_19514926_SNP [dm6]	G	A	2.479e^-4	0.794	INTRON Dys
3L	11544379	3L_11544379_SNP [dm3] 3L_11551279_SNP [dm6]	T	C	2.483e^-4	0.794	INTRON Mob2	TF binding site mE1_TFBS_D mE1_TFBS_HSA
2R	10096818	2R_10096818_SNP [dm3] 2R_14209313_SNP [dm6]	T	C	2.484e^-4	0.794	INTRON Sox15	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
3R	23952125	3R_23952125_SNP [dm3] 3R_28126403_SNP [dm6]	G	T	2.484e^-4	0.794	INTERGENIC
3R	23952128	3R_23952128_DEL [dm3] 3R_28126406_DEL [dm6]	TT	T	2.484e^-4	0.794	INTERGENIC
3R	23952136	3R_23952136_SNP [dm3] 3R_28126414_SNP [dm6]	A	G	2.484e^-4	0.794	INTERGENIC
3R	23952137	3R_23952137_INS [dm3] 3R_28126415_INS [dm6]	T	TA	2.484e^-4	0.794	INTERGENIC
3R	23952153	3R_23952153_SNP [dm3] 3R_28126431_SNP [dm6]	A	T	2.484e^-4	0.794	INTERGENIC
3L	5147200	3L_5147200_SNP [dm3] 3L_5154100_SNP [dm6]	C	T	2.488e^-4	0.794	SYNONYMOUS_CODING Srp54k	TF binding site mE1_TFBS_sens
3L	9007740	3L_9007740_SNP [dm3] 3L_9014640_SNP [dm6]	G	A	2.490e^-4	0.794	INTRON Doc2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	4523113	2L_4523113_SNP [dm3] 2L_4523113_SNP [dm6]	G	A	2.494e^-4	0.794	SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	15432953	2L_15432953_SNP [dm3] 2L_15432953_SNP [dm6]	A	C	2.495e^-4	0.794	UPSTREAM CG4161 INTERGENIC
X	14308136	X_14308136_SNP [dm3] X_14414103_SNP [dm6]	G	A	2.496e^-4	0.794	INTRON dpr8
3L	4700971	3L_4700971_SNP [dm3] 3L_4700971_SNP [dm6]	C	A	2.514e^-4	0.794	INTRON RhoGEF64C
3R	13168645	3R_13168645_SNP [dm3] 3R_17342923_SNP [dm6]	T	C	2.518e^-4	0.794	INTRON beat-IIa
2L	4524211	2L_4524211_SNP [dm3] 2L_4524211_SNP [dm6]	G	T	2.523e^-4	0.794	INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	8699375	3L_8699375_SNP [dm3] 3L_8706275_SNP [dm6]	C	T	2.524e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_cad
2R	19607651	2R_19607651_SNP [dm3] 2R_23720128_SNP [dm6]	T	G	2.525e^-4	0.794	UPSTREAM CG18128 DOWNSTREAM CR45325 INTRON Sesn
3R	16915135	3R_16915135_SNP [dm3] 3R_21089413_SNP [dm6]	C	T	2.533e^-4	0.794	INTRON RhoGAP93B & 1 other
X	19014109	X_19014109_SNP [dm3] X_19120076_SNP [dm6]	T	G	2.534e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_inv
3R	5853531	3R_5853531_SNP [dm3] 3R_10027809_SNP [dm6]	G	C	2.539e^-4	0.794	INTRON Mical
X	6408199	X_6408199_SNP [dm3] X_6514166_SNP [dm6]	C	T	2.540e^-4	0.794	INTRON CG42340
3L	11223939	3L_11223939_SNP [dm3] 3L_11230839_SNP [dm6]	A	G	2.540e^-4	0.794	DOWNSTREAM CR45405 & 1 other INTERGENIC
2L	8759011	2L_8759011_SNP [dm3] 2L_8759011_SNP [dm6]	G	T	2.545e^-4	0.794	INTERGENIC
3R	5362338	3R_5362338_SNP [dm3] 3R_9536616_SNP [dm6]	G	T	2.546e^-4	0.794	UTR_3_PRIME mura
3L	11452749	3L_11452749_INS [dm3] 3L_11459649_INS [dm6]	A	AA	2.548e^-4	0.794	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
3L	14912925	3L_14912925_DEL [dm3] 3L_14919825_DEL [dm6]	CC	C	2.554e^-4	0.794	INTRON DCX-EMAP
2R	15038134	2R_15038134_SNP [dm3] 2R_19150629_SNP [dm6]	T	A	2.557e^-4	0.794	INTRON ena	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	25528976	3R_25528976_SNP [dm3] 3R_29703254_SNP [dm6]	T	C	2.565e^-4	0.794	INTERGENIC
2L	6147546	2L_6147546_SNP [dm3] 2L_6147546_SNP [dm6]	C	T	2.585e^-4	0.794	INTERGENIC
3L	1932055	3L_1932055_DEL [dm3] 3L_1932055_DEL [dm6]	AAATA	A	2.587e^-4	0.794	INTRON Dbx
2L	8323686	2L_8323686_SNP [dm3] 2L_8323686_SNP [dm6]	C	T	2.588e^-4	0.794	INTRON CG7781
2L	9361807	2L_9361807_SNP [dm3] 2L_9361807_SNP [dm6]	T	C	2.598e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_inv
3R	12283262	3R_12283262_SNP [dm3] 3R_16457540_SNP [dm6]	T	C	2.605e^-4	0.794	SYNONYMOUS_CODING CG14883 DOWNSTREAM CG42232
2L	19478799	2L_19478799_SNP [dm3] 2L_19478799_SNP [dm6]	G	C	2.611e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
2L	3165595	2L_3165595_SNP [dm3] 2L_3165595_SNP [dm6]	G	A	2.611e^-4	0.794	INTRON Hydr2	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	5942497	2L_5942497_SNP [dm3] 2L_5942497_SNP [dm6]	T	C	2.613e^-4	0.794	DOWNSTREAM Sfp26Ad EXON CR45289
3R	12035704	3R_12035704_SNP [dm3] 3R_16209982_SNP [dm6]	G	T	2.615e^-4	0.794	UPSTREAM CR45638 DOWNSTREAM CR45640 & 1 other INTERGENIC
2L	5160017	2L_5160017_SNP [dm3] 2L_5160017_SNP [dm6]	G	T	2.615e^-4	0.794	SYNONYMOUS_CODING Msp300 INTRON Msp300
4	257125	4_257125_SNP [dm3] 4_236499_SNP [dm6]	C	T	2.615e^-4	0.794	INTRON CG1674	TF binding site mE1_TFBS_kn
2L	10973384	2L_10973384_SNP [dm3] 2L_10973384_SNP [dm6]	G	C	2.632e^-4	0.794	UTR_3_PRIME CG16743 DOWNSTREAM abo & 1 other
2L	905192	2L_905192_DEL [dm3] 2L_905192_DEL [dm6]	CTCCCTTC	C	2.633e^-4	0.794	DOWNSTREAM CR45261 INTERGENIC
2R	17975898	2R_17975898_SNP [dm3] 2R_22088393_SNP [dm6]	A	G	2.635e^-4	0.794	UPSTREAM CG13502 INTRON CG13502
X	13370179	X_13370179_SNP [dm3] X_13476146_SNP [dm6]	T	G	2.635e^-4	0.794	INTRON Neto
2R	9269155	2R_9269155_SNP [dm3] 2R_13381650_SNP [dm6]	T	C	2.640e^-4	0.794	INTERGENIC
3R	14455016	3R_14455016_SNP [dm3] 3R_18629294_SNP [dm6]	C	T	2.641e^-4	0.794	UTR_3_PRIME CG14301 UPSTREAM tRNA:CR31228 INTRON qin
X	7908805	X_7908805_SNP [dm3] X_8014772_SNP [dm6]	C	A	2.642e^-4	0.794	INTRON Tbh
2L	7814071	2L_7814071_SNP [dm3] 2L_7814071_SNP [dm6]	T	C	2.649e^-4	0.794	UPSTREAM LanB1 INTRON LanB1
2L	4346464	2L_4346464_SNP [dm3] 2L_4346464_SNP [dm6]	C	G	2.651e^-4	0.794	DOWNSTREAM Atet INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	14247752	X_14247752_SNP [dm3] X_14353719_SNP [dm6]	C	T	2.652e^-4	0.794	INTRON dpr8
3L	2247177	3L_2247177_SNP [dm3] 3L_2247177_SNP [dm6]	T	C	2.653e^-4	0.794	SYNONYMOUS_CODING CG32301 UTR_3_PRIME CG32301	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	22329941	3L_22329941_SNP [dm3] 3L_22336841_SNP [dm6]	T	C	2.655e^-4	0.794	INTRON Ten-m
3R	11598605	3R_11598605_SNP [dm3] 3R_15772883_SNP [dm6]	T	A	2.658e^-4	0.794	INTERGENIC
2L	8888197	2L_8888197_SNP [dm3] 2L_8888197_SNP [dm6]	C	T	2.658e^-4	0.794	UPSTREAM CR44415 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
3R	25930717	3R_25930717_INS [dm3] 3R_30104995_INS [dm6]	T	TGTATAAATAGT...	2.662e^-4	0.794	INTRON sima
3L	11452759	3L_11452759_SNP [dm3] 3L_11459659_SNP [dm6]	C	T	2.666e^-4	0.794	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
2L	3322271	2L_3322271_SNP [dm3] 2L_3322271_SNP [dm6]	A	T	2.673e^-4	0.794	INTRON CG8837	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	8634366	3L_8634366_INS [dm3] 3L_8641266_INS [dm6]	A	AA	2.674e^-4	0.794	INTRON Cpr66D
3R	10216370	3R_10216370_SNP [dm3] 3R_14390648_SNP [dm6]	A	G	2.675e^-4	0.794	INTERGENIC
2R	13598038	2R_13598038_SNP [dm3] 2R_17710533_SNP [dm6]	G	T	2.682e^-4	0.794	INTRON CG6424
2R	14278357	2R_14278357_DEL [dm3] 2R_18390852_DEL [dm6]	TTATTCGAT	T	2.688e^-4	0.794	UPSTREAM CG15068 DOWNSTREAM CG15065 INTERGENIC
3R	17379085	3R_17379085_SNP [dm3] 3R_21553363_SNP [dm6]	A	G	2.701e^-4	0.794	INTRON slou
3L	11452792	3L_11452792_DEL [dm3] 3L_11459692_DEL [dm6]	GGCACAAAG	G	2.706e^-4	0.794	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
3R	9542553	3R_9542553_SNP [dm3] 3R_13716831_SNP [dm6]	G	T	2.711e^-4	0.794	DOWNSTREAM CG9602 INTRON CG34383	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad
3L	9248790	3L_9248790_SNP [dm3] 3L_9255690_SNP [dm6]	T	A	2.711e^-4	0.794	INTRON GluRIB
3L	9252365	3L_9252365_SNP [dm3] 3L_9259265_SNP [dm6]	G	A	2.714e^-4	0.794	INTRON GluRIB	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	16177192	2L_16177192_SNP [dm3] 2L_16177192_SNP [dm6]	T	C	2.719e^-4	0.794	SYNONYMOUS_CODING Ca-alpha1D
3R	22198421	3R_22198421_SNP [dm3] 3R_26372699_SNP [dm6]	A	T	2.723e^-4	0.794	INTERGENIC
3L	5688780	3L_5688780_SNP [dm3] 3L_5695680_SNP [dm6]	G	T	2.731e^-4	0.794	UTR_5_PRIME sif INTRON sif	TF binding site mE1_TFBS_chinmo
2R	18125998	2R_18125998_DEL [dm3] 2R_22238493_DEL [dm6]	GCTG	G	2.745e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25357373	3R_25357373_SNP [dm3] 3R_29531651_SNP [dm6]	G	T	2.748e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_sens
3R	9882392	3R_9882392_INS [dm3] 3R_14056670_INS [dm6]	T	TGT	2.754e^-4	0.794	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	9566613	3L_9566613_INS [dm3] 3L_9573513_INS [dm6]	G	GGAATTGTTCTC...	2.754e^-4	0.794	INTRON CG42673
2R	19027591	2R_19027591_SNP [dm3] 2R_23140068_SNP [dm6]	T	C	2.755e^-4	0.794	SYNONYMOUS_CODING CG13544 DOWNSTREAM CG30192	TF binding site BDTNP1_TFBS_sna
2R	6058187	2R_6058187_SNP [dm3] 2R_10170682_SNP [dm6]	G	T	2.765e^-4	0.794	INTRON KCNQ
3R	4094085	3R_4094085_SNP [dm3] 3R_8268363_SNP [dm6]	G	T	2.766e^-4	0.794	NON_SYNONYMOUS_CODING CG9630 DOWNSTREAM Mcm2	regulatory region REDfly_CRMs
2R	16733178	2R_16733178_SNP [dm3] 2R_20845673_SNP [dm6]	G	T	2.767e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	10766469	3R_10766469_SNP [dm3] 3R_14940747_SNP [dm6]	A	T	2.768e^-4	0.794	INTERGENIC
3L	11393816	3L_11393816_DEL [dm3] 3L_11400716_DEL [dm6]	CCA	C	2.770e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	11393821	3L_11393821_DEL [dm3] 3L_11400721_DEL [dm6]	TCAC	T	2.770e^-4	0.794	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	14079086	3L_14079086_SNP [dm3] 3L_14085986_SNP [dm6]	A	C	2.776e^-4	0.794	DOWNSTREAM CG8100 INTERGENIC
2R	16103672	2R_16103672_SNP [dm3] 2R_20216167_SNP [dm6]	T	C	2.776e^-4	0.794	INTERGENIC
2R	16103673	2R_16103673_SNP [dm3] 2R_20216168_SNP [dm6]	C	T	2.776e^-4	0.794	INTERGENIC
3L	6669203	3L_6669203_SNP [dm3] 3L_6676103_SNP [dm6]	T	C	2.782e^-4	0.794	INTERGENIC
2R	12388918	2R_12388918_SNP [dm3] 2R_16501413_SNP [dm6]	T	C	2.782e^-4	0.794	INTRON Sema-2a	TF binding site BDTNP1_TFBS_twi
3L	12056262	3L_12056262_SNP [dm3] 3L_12063162_SNP [dm6]	T	A	2.783e^-4	0.794	INTRON rols	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	7493058	2L_7493058_SNP [dm3] 2L_7493058_SNP [dm6]	G	C	2.786e^-4	0.794	INTRON Ziz
3R	5806070	3R_5806070_SNP [dm3] 3R_9980348_SNP [dm6]	T	A	2.786e^-4	0.794	INTRON Glut4EF
2R	7549130	2R_7549130_SNP [dm3] 2R_11661625_SNP [dm6]	A	G	2.788e^-4	0.794	UPSTREAM tRNA:M2:48Bb INTRON Roc2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	17731748	3L_17731748_SNP [dm3] 3L_17738648_SNP [dm6]	C	T	2.792e^-4	0.794	SYNONYMOUS_CODING Ccn
2L	3322277	2L_3322277_SNP [dm3] 2L_3322277_SNP [dm6]	G	A	2.798e^-4	0.794	INTRON CG8837	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	6861159	2R_6861159_SNP [dm3] 2R_10973654_SNP [dm6]	C	T	2.798e^-4	0.794	INTERGENIC
3R	18574901	3R_18574901_SNP [dm3] 3R_22749179_SNP [dm6]	C	A	2.802e^-4	0.794	UTR_3_PRIME rumi UPSTREAM CG31139
3L	24300918	3L_24300918_SNP [dm3] 3L_24307818_SNP [dm6]	G	A	2.811e^-4	0.794	INTERGENIC
3L	18364381	3L_18364381_SNP [dm3] 3L_18371281_SNP [dm6]	G	A	2.813e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_sens
3L	10757529	3L_10757529_SNP [dm3] 3L_10764429_SNP [dm6]	G	T	2.813e^-4	0.794	INTERGENIC	TF binding site mE1_TFBS_HSA
2L	4346911	2L_4346911_SNP [dm3] 2L_4346911_SNP [dm6]	A	C	2.815e^-4	0.794	UPSTREAM CR44697 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	15055778	3L_15055778_SNP [dm3] 3L_15062678_SNP [dm6]	T	A	2.816e^-4	0.794	UPSTREAM CG13460 & 1 other INTRON Sytbeta
3R	7011984	3R_7011984_SNP [dm3] 3R_11186262_SNP [dm6]	T	A	2.816e^-4	0.794	INTERGENIC
3L	5775281	3L_5775281_SNP [dm3] 3L_5782181_SNP [dm6]	C	A	2.821e^-4	0.794	SYNONYMOUS_CODING PGRP-LD UTR_3_PRIME Pmi
3L	11452758	3L_11452758_SNP [dm3] 3L_11459658_SNP [dm6]	A	C	2.821e^-4	0.794	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
3R	26420743	3R_26420743_SNP [dm3] 3R_30595021_SNP [dm6]	T	A	2.827e^-4	0.794	INTRON CG2246
X	7907366	X_7907366_SNP [dm3] X_8013333_SNP [dm6]	G	T	2.829e^-4	0.794	INTRON Tbh
3R	26420746	3R_26420746_SNP [dm3] 3R_30595024_SNP [dm6]	T	A	2.839e^-4	0.796	INTRON CG2246
X	22140606	X_22140606_SNP [dm3] X_22738770_SNP [dm6]	A	C	2.850e^-4	0.796	INTRON CR44997	transposable element FlyBase
3R	12038586	3R_12038586_SNP [dm3] 3R_16212864_SNP [dm6]	G	A	2.850e^-4	0.796	UPSTREAM CR45642 INTERGENIC
3L	9654840	3L_9654840_SNP [dm3] 3L_9661740_SNP [dm6]	A	G	2.853e^-4	0.796	INTRON fry	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	24204967	3R_24204967_SNP [dm3] 3R_28379245_SNP [dm6]	G	C	2.855e^-4	0.796	INTERGENIC
3L	11452726	3L_11452726_SNP [dm3] 3L_11459626_SNP [dm6]	A	T	2.864e^-4	0.796	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
3R	15252812	3R_15252812_SNP [dm3] 3R_19427090_SNP [dm6]	T	C	2.870e^-4	0.796	INTRON CG31221
2L	13331663	2L_13331663_SNP [dm3] 2L_13331663_SNP [dm6]	C	T	2.872e^-4	0.796	UPSTREAM CG43778 INTERGENIC
2R	12639158	2R_12639158_SNP [dm3] 2R_16751653_SNP [dm6]	C	T	2.876e^-4	0.796	UTR_3_PRIME unc-104 UPSTREAM Acp53C14c
3L	8612720	3L_8612720_SNP [dm3] 3L_8619620_SNP [dm6]	T	C	2.877e^-4	0.796	UPSTREAM S-Lap2 DOWNSTREAM S-Lap1 INTERGENIC
3R	11598630	3R_11598630_SNP [dm3] 3R_15772908_SNP [dm6]	A	T	2.895e^-4	0.799	INTERGENIC
3L	6122248	3L_6122248_SNP [dm3] 3L_6129148_SNP [dm6]	T	G	2.897e^-4	0.799	UPSTREAM l_3_mbn INTERGENIC
2R	9798910	2R_9798910_SNP [dm3] 2R_13911405_SNP [dm6]	C	A	2.907e^-4	0.8	UPSTREAM shot INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	990355	3L_990355_SNP [dm3] 3L_990355_SNP [dm6]	A	C	2.909e^-4	0.8	SYNONYMOUS_CODING Glut1 UTR_3_PRIME Glut1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	5774137	3L_5774137_SNP [dm3] 3L_5781037_SNP [dm6]	G	T	2.915e^-4	0.8	UTR_5_PRIME PGRP-LD UTR_3_PRIME Pmi UPSTREAM PGRP-LD & 1 other INTRON PGRP-LD & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	10209390	2R_10209390_SNP [dm3] 2R_14321885_SNP [dm6]	C	T	2.922e^-4	0.801	INTRON Shroom
3L	12794878	3L_12794878_SNP [dm3] 3L_12801778_SNP [dm6]	G	C	2.926e^-4	0.801	INTRON Atg1	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	12853534	3L_12853534_SNP [dm3] 3L_12860434_SNP [dm6]	A	C	2.933e^-4	0.802	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_sens
3L	2319271	3L_2319271_SNP [dm3] 3L_2319271_SNP [dm6]	C	T	2.948e^-4	0.803	DOWNSTREAM CR45426 INTERGENIC
3L	9385371	3L_9385371_SNP [dm3] 3L_9392271_SNP [dm6]	T	A	2.949e^-4	0.803	INTRON CG4080	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	25930070	3R_25930070_SNP [dm3] 3R_30104348_SNP [dm6]	T	C	2.949e^-4	0.803	NON_SYNONYMOUS_CODING sima START_GAINED sima UTR_5_PRIME sima INTRON sima
3L	16343226	3L_16343226_SNP [dm3] 3L_16350126_SNP [dm6]	C	T	2.960e^-4	0.804	NON_SYNONYMOUS_CODING CG4925 DOWNSTREAM tRNA:CR32357
X	6323085	X_6323085_SNP [dm3] X_6429052_SNP [dm6]	C	G	2.961e^-4	0.804	INTRON CG42340
X	2874537	X_2874537_SNP [dm3] X_2980504_SNP [dm6]	C	A	2.966e^-4	0.804	INTRON kirre	regulatory region REDfly_CRMs
2R	13381480	2R_13381480_SNP [dm3] 2R_17493975_SNP [dm6]	G	T	2.970e^-4	0.804	SYNONYMOUS_CODING CG30103 DOWNSTREAM NT5E-2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	15363310	3R_15363310_SNP [dm3] 3R_19537588_SNP [dm6]	G	A	2.981e^-4	0.806	INTRON Dys
2R	10617505	2R_10617505_DEL [dm3] 2R_14730000_DEL [dm6]	AGTCGGCTTCTA...	A	2.998e^-4	0.806	INTERGENIC
3R	10902501	3R_10902501_SNP [dm3] 3R_15076779_SNP [dm6]	G	A	3.006e^-4	0.806	INTRON dpr9
3R	10902516	3R_10902516_SNP [dm3] 3R_15076794_SNP [dm6]	G	T	3.006e^-4	0.806	INTRON dpr9
3R	10902553	3R_10902553_SNP [dm3] 3R_15076831_SNP [dm6]	T	C	3.006e^-4	0.806	INTRON dpr9
3L	15884210	3L_15884210_SNP [dm3] 3L_15891110_SNP [dm6]	T	G	3.006e^-4	0.806	INTRON pHCl
3R	14460614	3R_14460614_INS [dm3] 3R_18634892_INS [dm6]	A	AA	3.007e^-4	0.806	INTRON qin & 1 other
3R	10369933	3R_10369933_SNP [dm3] 3R_14544211_SNP [dm6]	G	A	3.014e^-4	0.806	INTRON Pde6
2R	14192641	2R_14192641_SNP [dm3] 2R_18305136_SNP [dm6]	C	T	3.021e^-4	0.807	INTRON sbb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
2R	1630737	2R_1630737_SNP [dm3] 2R_5743232_SNP [dm6]	A	T	3.027e^-4	0.807	INTERGENIC	regulatory region REDfly_CRMs
2R	8925520	2R_8925520_INS [dm3] 2R_13038015_INS [dm6]	T	TT	3.033e^-4	0.808	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	19047161	3L_19047161_SNP [dm3] 3L_19054061_SNP [dm6]	G	A	3.039e^-4	0.808	UPSTREAM CG43407 INTERGENIC
2L	21898750	2L_21898750_SNP [dm3] 2L_21898750_SNP [dm6]	T	C	3.046e^-4	0.808	UPSTREAM CG11629 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_Trl
2L	18900034	2L_18900034_DEL [dm3] 2L_18900034_DEL [dm6]	GTGAGCC	G	3.047e^-4	0.808	EXON CR44739	TF binding site mE1_TFBS_cnc
2L	2630464	2L_2630464_SNP [dm3] 2L_2630464_SNP [dm6]	T	C	3.059e^-4	0.808	INTERGENIC
X	6323340	X_6323340_SNP [dm3] X_6429307_SNP [dm6]	G	T	3.063e^-4	0.808	INTRON CG42340
3L	12854871	3L_12854871_SNP [dm3] 3L_12861771_SNP [dm6]	T	C	3.074e^-4	0.808	UTR_3_PRIME CG10943 UPSTREAM CG32107	TF binding site mE1_TFBS_bab1
3L	11551151	3L_11551151_SNP [dm3] 3L_11558051_SNP [dm6]	A	T	3.077e^-4	0.808	INTRON Mob2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
X	3785691	X_3785691_SNP [dm3] X_3891658_SNP [dm6]	G	A	3.079e^-4	0.808	UTR_3_PRIME CG42541 DOWNSTREAM CG42541
3R	2307512	3R_2307512_SNP [dm3] 3R_6481790_SNP [dm6]	T	C	3.080e^-4	0.808	UPSTREAM CG15186 INTRON CG15186
3L	14134613	3L_14134613_SNP [dm3] 3L_14141513_SNP [dm6]	T	A	3.082e^-4	0.808	INTERGENIC	regulatory region REDfly_CRMs
2L	10699099	2L_10699099_SNP [dm3] 2L_10699099_SNP [dm6]	A	G	3.082e^-4	0.808	DOWNSTREAM CR44181 & 1 other INTERGENIC
2R	10956583	2R_10956583_SNP [dm3] 2R_15069078_SNP [dm6]	G	C	3.088e^-4	0.808	INTERGENIC
3L	11452731	3L_11452731_SNP [dm3] 3L_11459631_SNP [dm6]	A	G	3.090e^-4	0.808	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
2L	904242	2L_904242_SNP [dm3] 2L_904242_SNP [dm6]	G	A	3.115e^-4	0.812	EXON CR45261
X	2610450	X_2610450_SNP [dm3] X_2716417_SNP [dm6]	A	G	3.128e^-4	0.812	NON_SYNONYMOUS_CODING CG2694	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	11598585	3R_11598585_SNP [dm3] 3R_15772863_SNP [dm6]	A	T	3.144e^-4	0.812	INTERGENIC
3R	10224580	3R_10224580_SNP [dm3] 3R_14398858_SNP [dm6]	G	T	3.153e^-4	0.812	INTRON cv-c
2R	16310694	2R_16310694_DEL [dm3] 2R_20423189_DEL [dm6]	GG	G	3.156e^-4	0.812	INTERGENIC
3L	11227601	3L_11227601_SNP [dm3] 3L_11234501_SNP [dm6]	C	T	3.158e^-4	0.812	SYNONYMOUS_CODING Ir68a	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	4899851	3R_4899851_SNP [dm3] 3R_9074129_SNP [dm6]	G	A	3.161e^-4	0.812	INTRON pum
2L	2261692	2L_2261692_SNP [dm3] 2L_2261692_SNP [dm6]	A	T	3.165e^-4	0.812	INTERGENIC
3R	25929573	3R_25929573_SNP [dm3] 3R_30103851_SNP [dm6]	G	A	3.166e^-4	0.812	INTRON sima
2R	10209176	2R_10209176_SNP [dm3] 2R_14321671_SNP [dm6]	G	A	3.180e^-4	0.812	INTRON Shroom
3R	25393565	3R_25393565_SNP [dm3] 3R_29567843_SNP [dm6]	C	A	3.182e^-4	0.812	INTERGENIC	TF binding site mE1_TFBS_cad
3R	25919114	3R_25919114_SNP [dm3] 3R_30093392_SNP [dm6]	C	A	3.191e^-4	0.812	INTRON sima
2L	634207	2L_634207_SNP [dm3] 2L_634207_SNP [dm6]	T	A	3.196e^-4	0.812	INTERGENIC	transposable element FlyBase
3L	10802834	3L_10802834_INS [dm3] 3L_10809734_INS [dm6]	A	TT	3.197e^-4	0.812	INTERGENIC
3R	10215078	3R_10215078_SNP [dm3] 3R_14389356_SNP [dm6]	G	A	3.202e^-4	0.812	INTERGENIC
3R	25006674	3R_25006674_SNP [dm3] 3R_29180952_SNP [dm6]	A	G	3.204e^-4	0.812	INTRON CG14509
3R	5444931	3R_5444931_SNP [dm3] 3R_9619209_SNP [dm6]	C	A	3.204e^-4	0.812	INTRON CG8312
3L	16668697	3L_16668697_SNP [dm3] 3L_16675597_SNP [dm6]	C	T	3.209e^-4	0.812	SPLICE_SITE_REGION CG13032 DOWNSTREAM Lasp INTRON CG13032	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	14264736	X_14264736_SNP [dm3] X_14370703_SNP [dm6]	A	G	3.209e^-4	0.812	INTRON dpr8
3L	5305311	3L_5305311_SNP [dm3] 3L_5312211_SNP [dm6]	G	C	3.213e^-4	0.812	INTERGENIC
X	3428338	X_3428338_SNP [dm3] X_3534305_SNP [dm6]	T	A	3.221e^-4	0.812	INTRON CG32791	TF binding site mE1_TFBS_inv
3R	4882780	3R_4882780_SNP [dm3] 3R_9057058_SNP [dm6]	T	A	3.234e^-4	0.812	INTRON Kdm2	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
2L	9445539	2L_9445539_SNP [dm3] 2L_9445539_SNP [dm6]	C	G	3.248e^-4	0.812	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	3099427	2L_3099427_SNP [dm3] 2L_3099427_SNP [dm6]	C	T	3.252e^-4	0.812	INTRON toc
3L	2487942	3L_2487942_SNP [dm3] 3L_2487942_SNP [dm6]	G	A	3.254e^-4	0.812	UPSTREAM CG1146 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	4331387	X_4331387_SNP [dm3] X_4437354_SNP [dm6]	A	G	3.257e^-4	0.812	INTRON CR32773 & 1 other
3L	22494511	3L_22494511_SNP [dm3] 3L_22501411_SNP [dm6]	G	T	3.258e^-4	0.812	UPSTREAM CG43312 INTERGENIC
3L	5146943	3L_5146943_SNP [dm3] 3L_5153843_SNP [dm6]	G	A	3.258e^-4	0.812	INTRON Srp54k	TF binding site mE1_TFBS_sens
3L	10093553	3L_10093553_SNP [dm3] 3L_10100453_SNP [dm6]	G	C	3.260e^-4	0.812	NON_SYNONYMOUS_CODING CG42826 INTRON dpr6
3R	22668777	3R_22668777_SNP [dm3] 3R_26843055_SNP [dm6]	A	T	3.275e^-4	0.812	UTR_3_PRIME Lerp DOWNSTREAM Tl
X	8957546	X_8957546_SNP [dm3] X_9063513_SNP [dm6]	A	T	3.281e^-4	0.812	INTRON CG15365
3L	11452719	3L_11452719_SNP [dm3] 3L_11459619_SNP [dm6]	G	C	3.285e^-4	0.812	UTR_3_PRIME CG7551	TF binding site mE1_TFBS_inv
3L	17908064	3L_17908064_SNP [dm3] 3L_17914964_SNP [dm6]	A	G	3.287e^-4	0.812	INTERGENIC
3L	14569108	3L_14569108_SNP [dm3] 3L_14576008_SNP [dm6]	C	A	3.288e^-4	0.812	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da
X	8098093	X_8098093_SNP [dm3] X_8204060_SNP [dm6]	T	G	3.297e^-4	0.812	INTRON sdt	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	4640944	2L_4640944_SNP [dm3] 2L_4640944_SNP [dm6]	A	T	3.298e^-4	0.812	UPSTREAM BG642163 INTERGENIC
2L	9338417	2L_9338417_SNP [dm3] 2L_9338417_SNP [dm6]	T	C	3.303e^-4	0.812	INTRON Eaat1
3L	7330678	3L_7330678_SNP [dm3] 3L_7337578_SNP [dm6]	T	C	3.310e^-4	0.812	SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	5980874	X_5980874_SNP [dm3] X_6086841_SNP [dm6]	A	G	3.320e^-4	0.812	SYNONYMOUS_CODING raptor INTRON Mipp2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	5328062	3R_5328062_SNP [dm3] 3R_9502340_SNP [dm6]	A	T	3.326e^-4	0.812	INTRON RhoL	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	4701154	3L_4701154_SNP [dm3] 3L_4701154_SNP [dm6]	C	A	3.327e^-4	0.812	INTRON RhoGEF64C
3L	19509177	3L_19509177_SNP [dm3] 3L_19516077_SNP [dm6]	T	C	3.327e^-4	0.812	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
X	16155306	X_16155306_SNP [dm3] X_16261273_SNP [dm6]	T	C	3.341e^-4	0.812	INTERGENIC
3L	12295136	3L_12295136_SNP [dm3] 3L_12302036_SNP [dm6]	G	T	3.341e^-4	0.812	DOWNSTREAM CR44551 & 1 other INTERGENIC
3L	12295137	3L_12295137_SNP [dm3] 3L_12302037_SNP [dm6]	G	A	3.341e^-4	0.812	DOWNSTREAM CR44551 & 1 other INTERGENIC
3L	15320820	3L_15320820_SNP [dm3] 3L_15327720_SNP [dm6]	C	T	3.345e^-4	0.812	INTERGENIC
2L	4346510	2L_4346510_SNP [dm3] 2L_4346510_SNP [dm6]	A	G	3.345e^-4	0.812	UPSTREAM CR44697 DOWNSTREAM Atet INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	9246270	3R_9246270_SNP [dm3] 3R_13420548_SNP [dm6]	A	G	3.352e^-4	0.812	SYNONYMOUS_CODING Ir87a	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	9949778	3L_9949778_SNP [dm3] 3L_9956678_SNP [dm6]	T	A	3.353e^-4	0.812	INTRON CG34356
3L	9626596	3L_9626596_SNP [dm3] 3L_9633496_SNP [dm6]	C	T	3.359e^-4	0.812	SYNONYMOUS_CODING fry	TF binding site mE1_TFBS_cad
2R	10200612	2R_10200612_SNP [dm3] 2R_14313107_SNP [dm6]	G	A	3.360e^-4	0.812	INTRON Shroom	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	4710349	3L_4710349_SNP [dm3] 3L_4710349_SNP [dm6]	A	G	3.361e^-4	0.812	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4710350	3L_4710350_DEL [dm3] 3L_4710350_DEL [dm6]	TAGAT	T	3.361e^-4	0.812	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4710363	3L_4710363_SNP [dm3] 3L_4710363_SNP [dm6]	G	A	3.361e^-4	0.812	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	9151092	2R_9151092_SNP [dm3] 2R_13263587_SNP [dm6]	G	C	3.375e^-4	0.812	SYNONYMOUS_CODING CG42319 INTRON CG42319
2L	16794374	2L_16794374_SNP [dm3] 2L_16794374_SNP [dm6]	A	G	3.378e^-4	0.812	NON_SYNONYMOUS_CODING Ugt36Ba DOWNSTREAM CG17928	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	18026790	3L_18026790_SNP [dm3] 3L_18033690_SNP [dm6]	A	G	3.397e^-4	0.812	INTRON Eip75B
3R	25920552	3R_25920552_SNP [dm3] 3R_30094830_SNP [dm6]	C	T	3.404e^-4	0.812	INTRON sima	TF binding site mE1_TFBS_inv
2L	16126972	2L_16126972_SNP [dm3] 2L_16126972_SNP [dm6]	T	G	3.405e^-4	0.812	INTERGENIC
3R	22197766	3R_22197766_SNP [dm3] 3R_26372044_SNP [dm6]	G	T	3.410e^-4	0.812	INTERGENIC
2L	2261655	2L_2261655_SNP [dm3] 2L_2261655_SNP [dm6]	G	A	3.411e^-4	0.812	INTERGENIC
2L	13269393	2L_13269393_SNP [dm3] 2L_13269393_SNP [dm6]	A	G	3.416e^-4	0.812	INTRON CG44085
3R	15253241	3R_15253241_SNP [dm3] 3R_19427519_SNP [dm6]	C	T	3.421e^-4	0.812	INTRON CG31221
X	2439879	X_2439879_SNP [dm3] X_2545846_SNP [dm6]	G	A	3.422e^-4	0.812	UPSTREAM mir-4955 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	15710933	3L_15710933_SNP [dm3] 3L_15717833_SNP [dm6]	T	C	3.422e^-4	0.812	UTR_5_PRIME CG42570 DOWNSTREAM CG42571
2R	17116102	2R_17116102_SNP [dm3] 2R_21228597_SNP [dm6]	A	G	3.451e^-4	0.812	INTRON ASPP
X	22298530	X_22298530_SNP [dm3] X_22896694_SNP [dm6]	G	C	3.454e^-4	0.812	INTERGENIC	transposable element FlyBase
3L	8636075	3L_8636075_DEL [dm3] 3L_8642975_DEL [dm6]	TTACTCAT	T	3.459e^-4	0.812	INTRON Cpr66D	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	5246281	2L_5246281_SNP [dm3] 2L_5246281_SNP [dm6]	C	T	3.459e^-4	0.812	INTRON tkv	TF binding site mE1_TFBS_cnc
2L	16381665	2L_16381665_SNP [dm3] 2L_16381665_SNP [dm6]	T	A	3.466e^-4	0.812	INTERGENIC
3L	477529	3L_477529_SNP [dm3] 3L_477529_SNP [dm6]	A	G	3.468e^-4	0.812	INTRON klar
X	6693714	X_6693714_SNP [dm3] X_6799681_SNP [dm6]	T	A	3.480e^-4	0.812	INTRON C3G
2R	7551219	2R_7551219_SNP [dm3] 2R_11663714_SNP [dm6]	T	G	3.495e^-4	0.812	INTRON Roc2	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	11223942	3L_11223942_DEL [dm3] 3L_11230842_DEL [dm6]	AA	A	3.495e^-4	0.812	DOWNSTREAM CR45405 & 1 other INTERGENIC
2R	3840120	2R_3840120_SNP [dm3] 2R_7952615_SNP [dm6]	T	C	3.495e^-4	0.812	INTRON CG14764
2L	2671537	2L_2671537_SNP [dm3] 2L_2671537_SNP [dm6]	A	G	3.503e^-4	0.812	SYNONYMOUS_CODING Gr23a INTRON Gr23a	TF binding site mE1_TFBS_sens
3L	11552780	3L_11552780_SNP [dm3] 3L_11559680_SNP [dm6]	A	G	3.506e^-4	0.812	UPSTREAM Mob2 INTRON Mob2
3R	14180579	3R_14180579_SNP [dm3] 3R_18354857_SNP [dm6]	G	A	3.508e^-4	0.812	NON_SYNONYMOUS_CODING CG15803	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11549931	3L_11549931_INS [dm3] 3L_11556831_INS [dm6]	A	AATGGCTCTTTTTGA...	3.524e^-4	0.812	INTRON Mob2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	9170942	3L_9170942_SNP [dm3] 3L_9177842_SNP [dm6]	T	C	3.526e^-4	0.812	UTR_5_PRIME Rdl UPSTREAM Rdl
3R	23866771	3R_23866771_SNP [dm3] 3R_28041049_SNP [dm6]	G	C	3.534e^-4	0.812	INTRON CG34362
3L	4516597	3L_4516597_SNP [dm3] 3L_4516597_SNP [dm6]	G	C	3.535e^-4	0.812	INTRON Tie	TF binding site mE1_TFBS_inv
X	12098951	X_12098951_SNP [dm3] X_12204918_SNP [dm6]	G	T	3.537e^-4	0.812	INTRON Ten-a
X	16579012	X_16579012_SNP [dm3] X_16684979_SNP [dm6]	A	G	3.542e^-4	0.812	UTR_3_PRIME Sep4
3R	11598617	3R_11598617_SNP [dm3] 3R_15772895_SNP [dm6]	A	T	3.542e^-4	0.812	INTERGENIC
3R	10708193	3R_10708193_SNP [dm3] 3R_14882471_SNP [dm6]	A	T	3.562e^-4	0.812	UTR_3_PRIME CG3631 DOWNSTREAM Rrp6
3L	4174699	3L_4174699_SNP [dm3] 3L_4174699_SNP [dm6]	T	C	3.564e^-4	0.812	DOWNSTREAM Ero1L & 1 other INTRON CG18675
3R	2733673	3R_2733673_SNP [dm3] 3R_6907951_SNP [dm6]	G	C	3.566e^-4	0.812	UTR_3_PRIME Antp INTRON Antp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
3L	1370069	3L_1370069_SNP [dm3] 3L_1370069_SNP [dm6]	T	A	3.567e^-4	0.812	UPSTREAM ru INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
2L	1057249	2L_1057249_SNP [dm3] 2L_1057249_SNP [dm6]	G	A	3.573e^-4	0.812	INTRON S	TF binding site mE1_TFBS_sens
3L	10092919	3L_10092919_SNP [dm3] 3L_10099819_SNP [dm6]	C	T	3.576e^-4	0.812	SYNONYMOUS_CODING CG42826 INTRON dpr6
3R	15235197	3R_15235197_SNP [dm3] 3R_19409475_SNP [dm6]	G	A	3.577e^-4	0.812	SYNONYMOUS_CODING CG11626
3L	5868206	3L_5868206_SNP [dm3] 3L_5875106_SNP [dm6]	C	A	3.581e^-4	0.812	SYNONYMOUS_CODING CG18586
2R	16693003	2R_16693003_SNP [dm3] 2R_20805498_SNP [dm6]	C	T	3.581e^-4	0.812	INTERGENIC
2L	1651856	2L_1651856_INS [dm3] 2L_1651856_INS [dm6]	T	TATGT	3.582e^-4	0.812	INTRON chinmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	10415838	3L_10415838_SNP [dm3] 3L_10422738_SNP [dm6]	A	G	3.589e^-4	0.812	INTERGENIC
X	5385558	X_5385558_SNP [dm3] X_5491525_SNP [dm6]	T	C	3.589e^-4	0.812	INTRON SPR	TF binding site mE1_TFBS_chinmo
3R	5816818	3R_5816818_INS [dm3] 3R_9991096_INS [dm6]	A	ATCAGTAAAGGTCAAAGCTC...	3.594e^-4	0.812	UTR_3_PRIME Glut4EF
3R	14280409	3R_14280409_SNP [dm3] 3R_18454687_SNP [dm6]	G	A	3.600e^-4	0.812	INTRON fru
X	5449780	X_5449780_SNP [dm3] X_5555747_SNP [dm6]	A	T	3.605e^-4	0.812	INTRON Vsx2	TF binding site mE1_TFBS_Kr
3R	6865437	3R_6865437_SNP [dm3] 3R_11039715_SNP [dm6]	T	G	3.612e^-4	0.812	INTRON CG34114	TF binding site mE1_TFBS_inv
2R	10376657	2R_10376657_SNP [dm3] 2R_14489152_SNP [dm6]	C	T	3.614e^-4	0.812	INTRON L
X	13113053	X_13113053_SNP [dm3] X_13219020_SNP [dm6]	G	T	3.614e^-4	0.812	INTRON mew
3L	5769237	3L_5769237_SNP [dm3] 3L_5776137_SNP [dm6]	T	A	3.617e^-4	0.812	UTR_3_PRIME scny DOWNSTREAM vito & 1 other
X	13773008	X_13773008_SNP [dm3] X_13878975_SNP [dm6]	G	T	3.620e^-4	0.812	INTRON mamo
2L	7497990	2L_7497990_DEL [dm3] 2L_7497990_DEL [dm6]	TT	T	3.638e^-4	0.812	UTR_3_PRIME RapGAP1 UPSTREAM Obp28a
3R	544280	3R_544280_SNP [dm3] 3R_4718558_SNP [dm6]	G	T	3.646e^-4	0.812	DOWNSTREAM CR44923 & 1 other INTERGENIC	transposable element FlyBase
3R	25930705	3R_25930705_DEL [dm3] 3R_30104983_DEL [dm6]	ATGGCAACGTA...	A	3.649e^-4	0.812	INTRON sima
2R	12859039	2R_12859039_SNP [dm3] 2R_16971534_SNP [dm6]	T	C	3.652e^-4	0.812	EXON CR44377
X	2697963	X_2697963_SNP [dm3] X_2803930_SNP [dm6]	G	T	3.653e^-4	0.812	INTRON kirre
2L	13331781	2L_13331781_SNP [dm3] 2L_13331781_SNP [dm6]	T	C	3.660e^-4	0.812	UPSTREAM CG43778 INTERGENIC
3L	13955801	3L_13955801_SNP [dm3] 3L_13962701_SNP [dm6]	G	T	3.661e^-4	0.812	UTR_3_PRIME Meics DOWNSTREAM CG32137
X	15431705	X_15431705_SNP [dm3] X_15537672_SNP [dm6]	C	T	3.670e^-4	0.812	INTRON Ac13E
3L	15320856	3L_15320856_SNP [dm3] 3L_15327756_SNP [dm6]	T	A	3.679e^-4	0.812	INTERGENIC
3L	2643720	3L_2643720_SNP [dm3] 3L_2643720_SNP [dm6]	A	G	3.689e^-4	0.812	UPSTREAM CG14949 INTERGENIC
3L	11393813	3L_11393813_SNP [dm3] 3L_11400713_SNP [dm6]	T	C	3.697e^-4	0.812	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	4035212	3R_4035212_SNP [dm3] 3R_8209490_SNP [dm6]	G	A	3.700e^-4	0.812	INTERGENIC	TF binding site BDTNP1_TFBS_slp1
3R	12027632	3R_12027632_SNP [dm3] 3R_16201910_SNP [dm6]	C	T	3.700e^-4	0.812	INTRON CG6126	TF binding site mE1_TFBS_inv
2L	11307489	2L_11307489_DEL [dm3] 2L_11307489_DEL [dm6]	ATGTGGTGA	A	3.708e^-4	0.812	UPSTREAM CR43721 INTERGENIC
2L	5941683	2L_5941683_SNP [dm3] 2L_5941683_SNP [dm6]	G	T	3.712e^-4	0.812	UPSTREAM CR45289 DOWNSTREAM Sfp26Ad INTERGENIC
3R	21678472	3R_21678472_SNP [dm3] 3R_25852750_SNP [dm6]	T	A	3.720e^-4	0.812	INTRON CG5886
3R	14094198	3R_14094198_SNP [dm3] 3R_18268476_SNP [dm6]	G	A	3.735e^-4	0.812	INTRON CG18599
3R	9246268	3R_9246268_SNP [dm3] 3R_13420546_SNP [dm6]	G	A	3.735e^-4	0.812	NON_SYNONYMOUS_CODING Ir87a	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	6565815	3L_6565815_SNP [dm3] 3L_6572715_SNP [dm6]	C	A	3.736e^-4	0.812	INTRON CG18769 & 1 other
2L	14159090	2L_14159090_SNP [dm3] 2L_14159090_SNP [dm6]	G	A	3.736e^-4	0.812	UTR_3_PRIME CG17341
2L	17682564	2L_17682564_SNP [dm3] 2L_17682564_SNP [dm6]	T	C	3.743e^-4	0.812	INTRON CadN
3R	18164960	3R_18164960_SNP [dm3] 3R_22339238_SNP [dm6]	G	A	3.749e^-4	0.812	INTRON CG5388	TF binding site mE1_TFBS_Trl
2L	9157606	2L_9157606_SNP [dm3] 2L_9157606_SNP [dm6]	A	G	3.762e^-4	0.812	INTRON CG32982	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	9362383	2L_9362383_SNP [dm3] 2L_9362383_SNP [dm6]	C	T	3.763e^-4	0.812	INTERGENIC
3L	14523243	3L_14523243_SNP [dm3] 3L_14530143_SNP [dm6]	C	G	3.763e^-4	0.812	INTRON bbg
2L	8503709	2L_8503709_SNP [dm3] 2L_8503709_SNP [dm6]	T	C	3.769e^-4	0.812	INTRON Dh31
3L	18365929	3L_18365929_SNP [dm3] 3L_18372829_SNP [dm6]	T	C	3.770e^-4	0.812	INTERGENIC
3L	12473033	3L_12473033_SNP [dm3] 3L_12479933_SNP [dm6]	T	C	3.778e^-4	0.812	INTRON CG10663
3L	5910990	3L_5910990_SNP [dm3] 3L_5917890_SNP [dm6]	A	G	3.780e^-4	0.812	UPSTREAM CR45167 DOWNSTREAM CG10483 & 1 other INTERGENIC
3R	17326605	3R_17326605_SNP [dm3] 3R_21500883_SNP [dm6]	T	A	3.781e^-4	0.812	INTRON C15
3L	8550711	3L_8550711_SNP [dm3] 3L_8557611_SNP [dm6]	G	C	3.787e^-4	0.812	UPSTREAM rhea INTRON rhea	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	16004645	2R_16004645_SNP [dm3] 2R_20117140_SNP [dm6]	T	C	3.793e^-4	0.812	DOWNSTREAM 18w INTERGENIC
2R	6641276	2R_6641276_SNP [dm3] 2R_10753771_SNP [dm6]	G	A	3.797e^-4	0.812	INTRON CG33144
2L	14141763	2L_14141763_SNP [dm3] 2L_14141763_SNP [dm6]	T	C	3.806e^-4	0.812	INTRON CG17341
X	6444564	X_6444564_DEL [dm3] X_6550531_DEL [dm6]	GATA	G	3.809e^-4	0.812	INTRON CG34417	TF binding site BDTNP1_TFBS_dl
2R	17020011	2R_17020011_SNP [dm3] 2R_21132506_SNP [dm6]	C	T	3.810e^-4	0.812	SYNONYMOUS_CODING Magi	TF binding site mE1_TFBS_chinmo
3R	21330677	3R_21330677_SNP [dm3] 3R_25504955_SNP [dm6]	T	C	3.816e^-4	0.812	UPSTREAM CG5107 DOWNSTREAM CR45651 INTERGENIC	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	10193954	3L_10193954_SNP [dm3] 3L_10200854_SNP [dm6]	C	T	3.817e^-4	0.812	INTRON ect
2R	6641256	2R_6641256_SNP [dm3] 2R_10753751_SNP [dm6]	A	C	3.817e^-4	0.812	INTRON CG33144
2R	14144667	2R_14144667_SNP [dm3] 2R_18257162_SNP [dm6]	G	A	3.817e^-4	0.812	EXON CR44421	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	19311366	2L_19311366_SNP [dm3] 2L_19311366_SNP [dm6]	T	C	3.818e^-4	0.812	INTERGENIC	TF binding site mE1_TFBS_cad
3R	24204534	3R_24204534_SNP [dm3] 3R_28378812_SNP [dm6]	C	T	3.821e^-4	0.812	INTERGENIC
3R	13168731	3R_13168731_SNP [dm3] 3R_17343009_SNP [dm6]	C	A	3.821e^-4	0.812	INTRON beat-IIa
3L	10802923	3L_10802923_SNP [dm3] 3L_10809823_SNP [dm6]	A	G	3.824e^-4	0.812	INTERGENIC
3R	18101884	3R_18101884_SNP [dm3] 3R_22276162_SNP [dm6]	G	C	3.832e^-4	0.812	INTRON SKIP
2L	835402	2L_835402_SNP [dm3] 2L_835402_SNP [dm6]	C	T	3.834e^-4	0.812	SYNONYMOUS_CODING drongo
3R	22762584	3R_22762584_SNP [dm3] 3R_26936862_SNP [dm6]	A	G	3.845e^-4	0.812	INTRON sda
3R	22762594	3R_22762594_SNP [dm3] 3R_26936872_SNP [dm6]	G	T	3.845e^-4	0.812	INTRON sda
3L	995871	3L_995871_SNP [dm3] 3L_995871_SNP [dm6]	C	G	3.850e^-4	0.812	DOWNSTREAM trio & 1 other INTERGENIC
3L	22669164	3L_22669164_SNP [dm3] 3L_22676064_SNP [dm6]	T	A	3.853e^-4	0.812	INTRON CG14457
3L	14695826	3L_14695826_SNP [dm3] 3L_14702726_SNP [dm6]	G	A	3.853e^-4	0.812	INTRON ome
3R	4919456	3R_4919456_SNP [dm3] 3R_9093734_SNP [dm6]	C	T	3.871e^-4	0.812	INTRON pum
2L	7380269	2L_7380269_SNP [dm3] 2L_7380269_SNP [dm6]	G	A	3.873e^-4	0.812	SYNONYMOUS_CODING ninaC
3R	24205207	3R_24205207_SNP [dm3] 3R_28379485_SNP [dm6]	A	G	3.877e^-4	0.812	INTERGENIC
3L	4710366	3L_4710366_SNP [dm3] 3L_4710366_SNP [dm6]	C	T	3.886e^-4	0.812	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6147990	2L_6147990_SNP [dm3] 2L_6147990_SNP [dm6]	G	A	3.899e^-4	0.812	INTERGENIC
3R	11015110	3R_11015110_SNP [dm3] 3R_15189388_SNP [dm6]	C	A	3.903e^-4	0.812	NON_SYNONYMOUS_CODING Gyc88E	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	10693823	3R_10693823_SNP [dm3] 3R_14868101_SNP [dm6]	A	T	3.910e^-4	0.812	INTRON btsz
2R	9190138	2R_9190138_SNP [dm3] 2R_13302633_SNP [dm6]	T	C	3.911e^-4	0.812	INTERGENIC
3R	13168735	3R_13168735_SNP [dm3] 3R_17343013_SNP [dm6]	T	C	3.916e^-4	0.812	INTRON beat-IIa
3R	13161761	3R_13161761_SNP [dm3] 3R_17336039_SNP [dm6]	G	T	3.930e^-4	0.812	INTRON beat-IIa
3R	11598628	3R_11598628_SNP [dm3] 3R_15772906_SNP [dm6]	T	A	3.934e^-4	0.812	INTERGENIC
3L	7026807	3L_7026807_SNP [dm3] 3L_7033707_SNP [dm6]	G	A	3.942e^-4	0.812	INTRON Mp
3R	24205117	3R_24205117_SNP [dm3] 3R_28379395_SNP [dm6]	C	A	3.950e^-4	0.812	INTERGENIC
3L	9345120	3L_9345120_SNP [dm3] 3L_9352020_SNP [dm6]	G	C	3.955e^-4	0.812	SYNONYMOUS_CODING UGP DOWNSTREAM PGRP-LF
2L	10962109	2L_10962109_DEL [dm3] 2L_10962109_DEL [dm6]	ACCCA	A	3.962e^-4	0.812	INTRON dpr2
2R	12610642	2R_12610642_SNP [dm3] 2R_16723137_SNP [dm6]	T	A	3.965e^-4	0.812	INTRON CG30463
2L	19873399	2L_19873399_SNP [dm3] 2L_19873399_SNP [dm6]	T	G	3.972e^-4	0.812	INTRON sick
3R	15493839	3R_15493839_SNP [dm3] 3R_19668117_SNP [dm6]	T	C	3.973e^-4	0.812	INTRON CG7432
3R	11598597	3R_11598597_SNP [dm3] 3R_15772875_SNP [dm6]	C	T	3.976e^-4	0.812	INTERGENIC
2R	11732122	2R_11732122_SNP [dm3] 2R_15844617_SNP [dm6]	A	G	3.981e^-4	0.812	SYNONYMOUS_CODING CG8249 INTRON tun	TF binding site mE1_TFBS_sens
3L	12854883	3L_12854883_SNP [dm3] 3L_12861783_SNP [dm6]	T	A	3.983e^-4	0.812	UTR_3_PRIME CG10943 UPSTREAM CG32107	TF binding site mE1_TFBS_bab1
3L	13192935	3L_13192935_SNP [dm3] 3L_13199835_SNP [dm6]	C	T	3.988e^-4	0.812	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	7845372	3L_7845372_SNP [dm3] 3L_7852272_SNP [dm6]	A	T	3.992e^-4	0.812	INTRON Pdp1
X	14686693	X_14686693_SNP [dm3] X_14792660_SNP [dm6]	C	G	3.995e^-4	0.812	INTRON rut
3R	26420742	3R_26420742_SNP [dm3] 3R_30595020_SNP [dm6]	T	A	3.995e^-4	0.812	INTRON CG2246
3R	11543653	3R_11543653_SNP [dm3] 3R_15717931_SNP [dm6]	G	C	4.001e^-4	0.812	INTERGENIC
2L	10711044	2L_10711044_SNP [dm3] 2L_10711044_SNP [dm6]	C	T	4.003e^-4	0.812	DOWNSTREAM CR44407 INTERGENIC
X	10066204	X_10066204_SNP [dm3] X_10172171_SNP [dm6]	T	G	4.006e^-4	0.812	INTRON CG43902 & 1 other
3L	10757578	3L_10757578_SNP [dm3] 3L_10764478_SNP [dm6]	C	T	4.008e^-4	0.812	INTERGENIC
2L	8351480	2L_8351480_SNP [dm3] 2L_8351480_SNP [dm6]	T	C	4.009e^-4	0.812	UPSTREAM Mur29B DOWNSTREAM CG7778 INTERGENIC
3L	6394458	3L_6394458_SNP [dm3] 3L_6401358_SNP [dm6]	A	T	4.011e^-4	0.812	INTRON CG42747	TF binding site BDTNP1_TFBS_z mE1_TFBS_sens
2L	5884988	2L_5884988_SNP [dm3] 2L_5884988_SNP [dm6]	G	A	4.014e^-4	0.812	UTR_5_PRIME CG43185 UPSTREAM Sfp26Ac DOWNSTREAM CG44574 INTRON CG43185
X	8830537	X_8830537_SNP [dm3] X_8936504_SNP [dm6]	G	C	4.016e^-4	0.812	INTRON rdgA
3L	13060871	3L_13060871_SNP [dm3] 3L_13067771_SNP [dm6]	G	A	4.019e^-4	0.812	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
3R	18813750	3R_18813750_SNP [dm3] 3R_22988028_SNP [dm6]	A	G	4.025e^-4	0.812	INTRON Nha2 & 1 other
2L	4505507	2L_4505507_SNP [dm3] 2L_4505507_SNP [dm6]	G	A	4.026e^-4	0.812	SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	16012418	3L_16012418_SNP [dm3] 3L_16019318_SNP [dm6]	C	T	4.035e^-4	0.812	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	18205263	3L_18205263_SNP [dm3] 3L_18212163_SNP [dm6]	C	T	4.036e^-4	0.812	INTERGENIC	TF binding site mE1_TFBS_cnc
3R	22029989	3R_22029989_SNP [dm3] 3R_26204267_SNP [dm6]	T	C	4.040e^-4	0.812	INTRON CR44320
2L	3887588	2L_3887588_SNP [dm3] 2L_3887588_SNP [dm6]	C	T	4.056e^-4	0.812	SYNONYMOUS_CODING capu INTRON capu
X	16009935	X_16009935_SNP [dm3] X_16115902_SNP [dm6]	G	A	4.063e^-4	0.812	INTERGENIC
3R	18820215	3R_18820215_SNP [dm3] 3R_22994493_SNP [dm6]	C	A	4.067e^-4	0.812	UPSTREAM Nha2 INTRON Nha2
2L	16171387	2L_16171387_SNP [dm3] 2L_16171387_SNP [dm6]	T	G	4.068e^-4	0.812	INTRON Ca-alpha1D
2L	7469832	2L_7469832_SNP [dm3] 2L_7469832_SNP [dm6]	A	G	4.069e^-4	0.812	INTRON CG6055
2R	9143623	2R_9143623_SNP [dm3] 2R_13256118_SNP [dm6]	T	A	4.070e^-4	0.812	UPSTREAM CR44343 & 1 other INTERGENIC
3L	9626871	3L_9626871_SNP [dm3] 3L_9633771_SNP [dm6]	G	A	4.074e^-4	0.812	SYNONYMOUS_CODING fry	TF binding site mE1_TFBS_cad
3L	10724632	3L_10724632_SNP [dm3] 3L_10731532_SNP [dm6]	T	A	4.080e^-4	0.812	INTERGENIC
3L	16665789	3L_16665789_SNP [dm3] 3L_16672689_SNP [dm6]	A	T	4.083e^-4	0.812	INTRON zetaCOP
3R	10039195	3R_10039195_SNP [dm3] 3R_14213473_SNP [dm6]	G	C	4.083e^-4	0.812	INTRON Dop1R1
2L	10699094	2L_10699094_SNP [dm3] 2L_10699094_SNP [dm6]	G	A	4.086e^-4	0.812	DOWNSTREAM CR44181 & 1 other INTERGENIC
3L	18538852	3L_18538852_SNP [dm3] 3L_18545752_SNP [dm6]	C	T	4.089e^-4	0.812	INTERGENIC
3R	11598640	3R_11598640_SNP [dm3] 3R_15772918_SNP [dm6]	A	G	4.090e^-4	0.812	INTERGENIC
2R	10221304	2R_10221304_SNP [dm3] 2R_14333799_SNP [dm6]	G	A	4.091e^-4	0.812	INTRON Shroom	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	22650620	3L_22650620_SNP [dm3] 3L_22657520_SNP [dm6]	G	C	4.096e^-4	0.812	INTERGENIC
3R	12978085	3R_12978085_SNP [dm3] 3R_17152363_SNP [dm6]	C	A	4.105e^-4	0.812	SYNONYMOUS_CODING CG5292 DOWNSTREAM CG5285 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	8437013	X_8437013_DEL [dm3] X_8542980_DEL [dm6]	CTGTT	C	4.107e^-4	0.812	INTRON Nrg
3L	14523237	3L_14523237_SNP [dm3] 3L_14530137_SNP [dm6]	A	T	4.109e^-4	0.812	INTRON bbg
3L	10183456	3L_10183456_SNP [dm3] 3L_10190356_SNP [dm6]	G	A	4.110e^-4	0.812	UTR_3_PRIME ect
3R	21354324	3R_21354324_SNP [dm3] 3R_25528602_SNP [dm6]	G	C	4.112e^-4	0.812	INTRON msi
3L	18952059	3L_18952059_DEL [dm3] 3L_18958959_DEL [dm6]	GA	G	4.113e^-4	0.812	INTERGENIC
X	5144430	X_5144430_INS [dm3] X_5250397_INS [dm6]	T	TG	4.115e^-4	0.812	INTRON CG15465 & 1 other
3L	10206247	3L_10206247_SNP [dm3] 3L_10213147_SNP [dm6]	C	A	4.116e^-4	0.812	INTERGENIC
3R	17369583	3R_17369583_SNP [dm3] 3R_21543861_SNP [dm6]	G	A	4.120e^-4	0.812	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17154992	X_17154992_SNP [dm3] X_17260959_SNP [dm6]	A	G	4.125e^-4	0.812	INTRON f
3L	14857915	3L_14857915_SNP [dm3] 3L_14864815_SNP [dm6]	T	G	4.133e^-4	0.812	INTRON CG17839
3R	6069515	3R_6069515_SNP [dm3] 3R_10243793_SNP [dm6]	A	C	4.136e^-4	0.812	NON_SYNONYMOUS_CODING CG42795
X	5522538	X_5522538_SNP [dm3] X_5628505_SNP [dm6]	C	T	4.136e^-4	0.812	UTR_3_PRIME CG42492
3L	4710364	3L_4710364_SNP [dm3] 3L_4710364_SNP [dm6]	T	A	4.149e^-4	0.812	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10980051	2R_10980051_SNP [dm3] 2R_15092546_SNP [dm6]	G	A	4.158e^-4	0.812	DOWNSTREAM CR44457 INTERGENIC
2L	17565430	2L_17565430_DEL [dm3] 2L_17565430_DEL [dm6]	AGCTATTTTGTTATCTTACC...	A	4.163e^-4	0.812	UPSTREAM mir-124 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	9251233	3R_9251233_SNP [dm3] 3R_13425511_SNP [dm6]	C	T	4.164e^-4	0.812	UPSTREAM Act87E DOWNSTREAM CR45591 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4269845	2L_4269845_SNP [dm3] 2L_4269845_SNP [dm6]	C	T	4.165e^-4	0.812	INTERGENIC
2L	17644252	2L_17644252_SNP [dm3] 2L_17644252_SNP [dm6]	T	A	4.175e^-4	0.812	DOWNSTREAM CR45699 INTERGENIC
2L	1677948	2L_1677948_SNP [dm3] 2L_1677948_SNP [dm6]	A	G	4.182e^-4	0.812	INTRON chinmo
X	10920126	X_10920126_SNP [dm3] X_11026093_SNP [dm6]	C	T	4.184e^-4	0.812	INTRON CG42339
X	771000	X_771000_SNP [dm3] X_876967_SNP [dm6]	G	A	4.185e^-4	0.812	DOWNSTREAM CG11664 INTRON CG43867
3L	921902	3L_921902_SNP [dm3] 3L_921902_SNP [dm6]	T	C	4.199e^-4	0.812	INTRON Glut1
2R	19726893	2R_19726893_SNP [dm3] 2R_23839370_SNP [dm6]	C	T	4.217e^-4	0.812	UTR_3_PRIME CG5549 DOWNSTREAM snoRNA:Psi18S-176
2R	7681288	2R_7681288_SNP [dm3] 2R_11793783_SNP [dm6]	C	A	4.231e^-4	0.812	INTRON ths	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3L	2680513	3L_2680513_SNP [dm3] 3L_2680513_SNP [dm6]	A	C	4.232e^-4	0.812	INTRON Fife
X	5447236	X_5447236_SNP [dm3] X_5553203_SNP [dm6]	A	G	4.234e^-4	0.812	INTRON Vsx2	TF binding site BDTNP1_TFBS_dl
2R	17922521	2R_17922521_SNP [dm3] 2R_22035016_SNP [dm6]	T	C	4.249e^-4	0.812	SYNONYMOUS_CODING CG9308 INTRON CG34370
3L	8888646	3L_8888646_SNP [dm3] 3L_8895546_SNP [dm6]	G	A	4.250e^-4	0.812	SPLICE_SITE_REGION TrpA1 INTRON TrpA1
3R	13168730	3R_13168730_SNP [dm3] 3R_17343008_SNP [dm6]	A	C	4.251e^-4	0.812	INTRON beat-IIa
3R	23337361	3R_23337361_SNP [dm3] 3R_27511639_SNP [dm6]	C	A	4.252e^-4	0.812	INTERGENIC
2R	10956567	2R_10956567_SNP [dm3] 2R_15069062_SNP [dm6]	T	G	4.256e^-4	0.812	INTERGENIC
X	3427804	X_3427804_INS [dm3] X_3533771_INS [dm6]	T	TATTAACCATTGTT...	4.258e^-4	0.812	INTRON CG32791	TF binding site mE1_TFBS_inv
2R	7680689	2R_7680689_SNP [dm3] 2R_11793184_SNP [dm6]	A	G	4.262e^-4	0.812	INTRON ths	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3R	25919173	3R_25919173_SNP [dm3] 3R_30093451_SNP [dm6]	T	C	4.265e^-4	0.812	INTRON sima
2L	634193	2L_634193_SNP [dm3] 2L_634193_SNP [dm6]	C	G	4.265e^-4	0.812	INTERGENIC	transposable element FlyBase
3L	8875085	3L_8875085_INS [dm3] 3L_8881985_INS [dm6]	A	AG	4.269e^-4	0.812	INTRON dally
3L	8875101	3L_8875101_SNP [dm3] 3L_8882001_SNP [dm6]	C	T	4.269e^-4	0.812	INTRON dally
3L	8875102	3L_8875102_INS [dm3] 3L_8882002_INS [dm6]	G	GT	4.269e^-4	0.812	INTRON dally
3R	18651984	3R_18651984_SNP [dm3] 3R_22826262_SNP [dm6]	G	A	4.273e^-4	0.812	EXON CR44350
3L	19933156	3L_19933156_SNP [dm3] 3L_19940056_SNP [dm6]	T	G	4.274e^-4	0.812	INTRON Ac76E
3L	18536600	3L_18536600_SNP [dm3] 3L_18543500_SNP [dm6]	T	C	4.280e^-4	0.812	INTERGENIC
3L	11452608	3L_11452608_SNP [dm3] 3L_11459508_SNP [dm6]	T	C	4.284e^-4	0.812	SYNONYMOUS_CODING CG7551	TF binding site mE1_TFBS_inv
2R	6028627	2R_6028627_SNP [dm3] 2R_10141122_SNP [dm6]	T	C	4.287e^-4	0.812	NON_SYNONYMOUS_CODING Or46a UPSTREAM CR43467 INTRON Or46a EXON CR43467	TF binding site mE1_TFBS_sens
2L	7581774	2L_7581774_INS [dm3] 2L_7581774_INS [dm6]	G	GGG	4.287e^-4	0.812	UPSTREAM Spn28B INTERGENIC
3L	12792483	3L_12792483_SNP [dm3] 3L_12799383_SNP [dm6]	G	A	4.291e^-4	0.812	INTRON Atg1
3L	15713760	3L_15713760_SNP [dm3] 3L_15720660_SNP [dm6]	C	G	4.297e^-4	0.812	DOWNSTREAM CG42570 & 1 other INTERGENIC
3R	9637894	3R_9637894_SNP [dm3] 3R_13812172_SNP [dm6]	G	T	4.304e^-4	0.812	UPSTREAM tal-AA & 3 others INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	1484967	3L_1484967_SNP [dm3] 3L_1484967_SNP [dm6]	T	C	4.304e^-4	0.812	INTRON stet	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
3L	3951507	3L_3951507_SNP [dm3] 3L_3951507_SNP [dm6]	T	C	4.309e^-4	0.812	INTRON CG14984
X	22297089	X_22297089_SNP [dm3] X_22895253_SNP [dm6]	G	T	4.310e^-4	0.812	INTERGENIC
3L	15889292	3L_15889292_SNP [dm3] 3L_15896192_SNP [dm6]	T	G	4.314e^-4	0.812	INTRON pHCl
3L	9108813	3L_9108813_SNP [dm3] 3L_9115713_SNP [dm6]	G	A	4.318e^-4	0.812	INTRON bol
2L	5942732	2L_5942732_SNP [dm3] 2L_5942732_SNP [dm6]	T	C	4.320e^-4	0.812	UTR_3_PRIME Sfp26Ad UPSTREAM Gpdh DOWNSTREAM Sfp26Ad & 1 other
3R	22197946	3R_22197946_SNP [dm3] 3R_26372224_SNP [dm6]	T	G	4.320e^-4	0.812	INTERGENIC
2R	17116081	2R_17116081_SNP [dm3] 2R_21228576_SNP [dm6]	G	A	4.320e^-4	0.812	INTRON ASPP
2R	11665562	2R_11665562_SNP [dm3] 2R_15778057_SNP [dm6]	T	A	4.321e^-4	0.812	INTRON Zasp52
3L	4710377	3L_4710377_DEL [dm3] 3L_4710377_DEL [dm6]	AG	A	4.322e^-4	0.812	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15253079	3R_15253079_SNP [dm3] 3R_19427357_SNP [dm6]	A	T	4.322e^-4	0.812	INTRON CG31221
2R	18066632	2R_18066632_SNP [dm3] 2R_22179127_SNP [dm6]	C	A	4.325e^-4	0.812	UPSTREAM CG11170 & 1 other INTRON CG11170	TF binding site BDTNP1_TFBS_twi
3L	18717614	3L_18717614_INS [dm3] 3L_18724514_INS [dm6]	A	ACATACATA	4.329e^-4	0.812	DOWNSTREAM CR43985 INTERGENIC
2R	7549228	2R_7549228_SNP [dm3] 2R_11661723_SNP [dm6]	T	A	4.330e^-4	0.812	INTRON Roc2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	13598385	2L_13598385_SNP [dm3] 2L_13598385_SNP [dm6]	G	C	4.332e^-4	0.812	INTRON kuz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9764145	3R_9764145_SNP [dm3] 3R_13938423_SNP [dm6]	T	C	4.338e^-4	0.812	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
2R	7548930	2R_7548930_SNP [dm3] 2R_11661425_SNP [dm6]	T	A	4.339e^-4	0.812	UPSTREAM tRNA:M2:48Bb INTRON Roc2	TF binding site BDTNP1_TFBS_dl
2R	1630729	2R_1630729_SNP [dm3] 2R_5743224_SNP [dm6]	T	A	4.340e^-4	0.812	INTERGENIC	regulatory region REDfly_CRMs
3L	10899159	3L_10899159_DEL [dm3] 3L_10906059_DEL [dm6]	AA	G	4.363e^-4	0.812	INTERGENIC
3L	14977503	3L_14977503_SNP [dm3] 3L_14984403_SNP [dm6]	G	A	4.363e^-4	0.812	SYNONYMOUS_CODING CG5114 UPSTREAM mnd
3L	2710359	3L_2710359_SNP [dm3] 3L_2710359_SNP [dm6]	T	A	4.379e^-4	0.812	INTRON Fife
2L	8888098	2L_8888098_SNP [dm3] 2L_8888098_SNP [dm6]	A	G	4.386e^-4	0.812	UPSTREAM CR44415 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	20135280	3L_20135280_SNP [dm3] 3L_20142180_SNP [dm6]	G	A	4.388e^-4	0.812	INTERGENIC
3R	12035536	3R_12035536_SNP [dm3] 3R_16209814_SNP [dm6]	C	T	4.392e^-4	0.812	UPSTREAM CR45639 & 1 other DOWNSTREAM CR45640 EXON CR45637
3L	14448448	3L_14448448_SNP [dm3] 3L_14455348_SNP [dm6]	A	G	4.400e^-4	0.812	INTRON bbg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA

By genomic position
Variant impact
Gene name

pc_Surv_MeHg_10 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results