DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=2.335e^-9)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

845 significant hits at p-value < 0.001.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	671971	3L_671971_SNP [dm3] 3L_671971_SNP [dm6]	C	T	2.356e^-6	1	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
2R	8329688	2R_8329688_SNP [dm3] 2R_12442183_SNP [dm6]	C	T	4.012e^-6	1	UPSTREAM CG30334 INTRON Dyb	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	8374969	2R_8374969_SNP [dm3] 2R_12487464_SNP [dm6]	A	C	5.749e^-6	1	UTR_3_PRIME Dh44-R2 & 1 other UPSTREAM CG34234 DOWNSTREAM Dh44-R2 & 1 other
X	14759669	X_14759669_SNP [dm3] X_14865636_SNP [dm6]	C	G	1.006e^-5	1	SYNONYMOUS_CODING CG9518 INTRON Flo2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
2R	8372602	2R_8372602_SNP [dm3] 2R_12485097_SNP [dm6]	C	A	1.201e^-5	1	INTRON Dh44-R2
3L	9609799	3L_9609799_SNP [dm3] 3L_9616699_SNP [dm6]	G	A	1.299e^-5	1	INTRON LanB2	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	21280700	3L_21280700_SNP [dm3] 3L_21287600_SNP [dm6]	G	T	1.304e^-5	1	SYNONYMOUS_CODING pzg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	9609761	3L_9609761_SNP [dm3] 3L_9616661_SNP [dm6]	A	T	1.304e^-5	1	INTRON LanB2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	8329798	2R_8329798_SNP [dm3] 2R_12442293_SNP [dm6]	C	T	1.312e^-5	1	UPSTREAM CG30334 INTRON Dyb	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	8372590	2R_8372590_SNP [dm3] 2R_12485085_SNP [dm6]	T	C	1.347e^-5	1	INTRON Dh44-R2
X	7443024	X_7443024_SNP [dm3] X_7548991_SNP [dm6]	G	T	1.944e^-5	1	UPSTREAM CG32719 INTERGENIC	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi
2L	22426455	2L_22426455_SNP [dm3] 2L_22533723_SNP [dm6]	G	A	1.965e^-5	1	UTR_3_PRIME RpL5 DOWNSTREAM RpL5
2R	8329677	2R_8329677_SNP [dm3] 2R_12442172_SNP [dm6]	G	A	2.287e^-5	1	UPSTREAM CG30334 INTRON Dyb	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	8372579	2R_8372579_SNP [dm3] 2R_12485074_SNP [dm6]	T	C	2.289e^-5	1	INTRON Dh44-R2
X	8553578	X_8553578_SNP [dm3] X_8659545_SNP [dm6]	G	A	2.338e^-5	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_slp1 mE1_TFBS_HSA
3L	9609737	3L_9609737_SNP [dm3] 3L_9616637_SNP [dm6]	C	G	2.371e^-5	1	INTRON LanB2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	9609752	3L_9609752_SNP [dm3] 3L_9616652_SNP [dm6]	C	A	2.773e^-5	1	INTRON LanB2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	9758866	3L_9758866_DEL [dm3] 3L_9765766_DEL [dm6]	CT	C	3.681e^-5	1	UTR_5_PRIME CG8177 INTRON CG8177
3L	525773	3L_525773_SNP [dm3] 3L_525773_SNP [dm6]	G	C	3.791e^-5	1	INTRON klar
2L	22426453	2L_22426453_SNP [dm3] 2L_22533721_SNP [dm6]	G	A	3.815e^-5	1	UTR_3_PRIME RpL5 DOWNSTREAM RpL5
2L	22426492	2L_22426492_SNP [dm3] 2L_22533760_SNP [dm6]	G	C	3.815e^-5	1	UTR_3_PRIME RpL5 DOWNSTREAM RpL5
2R	8366266	2R_8366266_SNP [dm3] 2R_12478761_SNP [dm6]	A	G	4.103e^-5	1	INTRON Dh44-R2
2R	8329698	2R_8329698_SNP [dm3] 2R_12442193_SNP [dm6]	A	C	4.211e^-5	1	UPSTREAM CG30334 INTRON Dyb	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	8466365	X_8466365_INS [dm3] X_8572332_INS [dm6]	G	GG	4.344e^-5	1	INTRON spirit	TF binding site mE1_TFBS_chinmo
2L	16908727	2L_16908727_SNP [dm3] 2L_16908727_SNP [dm6]	T	A	4.449e^-5	1	SYNONYMOUS_CODING ApepP INTRON tweek	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	5325444	X_5325444_SNP [dm3] X_5431411_SNP [dm6]	C	G	4.679e^-5	1	SYNONYMOUS_CODING CG15784	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
X	14759495	X_14759495_SNP [dm3] X_14865462_SNP [dm6]	A	G	4.967e^-5	1	SYNONYMOUS_CODING CG9518 INTRON Flo2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
2L	11423873	2L_11423873_SNP [dm3] 2L_11423873_SNP [dm6]	A	G	5.224e^-5	1	INTERGENIC
2L	17587740	2L_17587740_SNP [dm3] 2L_17587740_SNP [dm6]	C	T	5.239e^-5	1	DOWNSTREAM CR44411 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	3679127	2R_3679127_SNP [dm3] 2R_7791622_SNP [dm6]	C	A	5.243e^-5	1	DOWNSTREAM Gapdh1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19024174	2R_19024174_SNP [dm3] 2R_23136651_SNP [dm6]	G	A	6.106e^-5	1	INTERGENIC
2R	8372508	2R_8372508_SNP [dm3] 2R_12485003_SNP [dm6]	T	C	6.328e^-5	1	SYNONYMOUS_CODING Dh44-R2
3R	13964500	3R_13964500_SNP [dm3] 3R_18138778_SNP [dm6]	G	T	6.353e^-5	1	INTERGENIC
2L	9514468	2L_9514468_SNP [dm3] 2L_9514468_SNP [dm6]	A	G	6.478e^-5	1	INTRON CG33298
2R	8372296	2R_8372296_SNP [dm3] 2R_12484791_SNP [dm6]	C	A	6.793e^-5	1	SYNONYMOUS_CODING Dh44-R2
2L	22428072	2L_22428072_SNP [dm3] 2L_22535340_SNP [dm6]	A	G	7.085e^-5	1	DOWNSTREAM snoRNA:Psi28S-2996 INTRON RpL5
2R	8375003	2R_8375003_SNP [dm3] 2R_12487498_SNP [dm6]	A	G	7.257e^-5	1	UTR_3_PRIME Dh44-R2 & 1 other UPSTREAM CG34234 DOWNSTREAM Dh44-R2 & 1 other
2R	7692450	2R_7692450_SNP [dm3] 2R_11804945_SNP [dm6]	G	C	7.395e^-5	1	INTRON ths
2R	8373371	2R_8373371_SNP [dm3] 2R_12485866_SNP [dm6]	G	A	7.433e^-5	1	DOWNSTREAM CG34234 INTRON Dh44-R2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	12289734	2L_12289734_SNP [dm3] 2L_12289734_SNP [dm6]	A	T	7.565e^-5	1	INTRON aret	TF binding site BDTNP1_TFBS_twi
3R	24731620	3R_24731620_SNP [dm3] 3R_28905898_SNP [dm6]	A	G	7.729e^-5	1	NON_SYNONYMOUS_CODING Doa INTRON Doa	TF binding site mE1_TFBS_chinmo
X	16244036	X_16244036_SNP [dm3] X_16350003_SNP [dm6]	C	T	8.215e^-5	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
X	19190787	X_19190787_SNP [dm3] X_19296754_SNP [dm6]	A	G	8.294e^-5	1	INTRON CG8034	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
2R	16561897	2R_16561897_SNP [dm3] 2R_20674392_SNP [dm6]	T	C	8.402e^-5	1	DOWNSTREAM CG30152 INTERGENIC	TF binding site mE1_TFBS_chinmo
X	7989580	X_7989580_SNP [dm3] X_8095547_SNP [dm6]	A	T	8.485e^-5	1	UTR_3_PRIME CG2258 DOWNSTREAM CG2258
2R	11803520	2R_11803520_SNP [dm3] 2R_15916015_SNP [dm6]	C	T	8.642e^-5	1	INTRON sli EXON CR44373
2R	12668012	2R_12668012_DEL [dm3] 2R_16780507_DEL [dm6]	CG	C	9.082e^-5	1	UTR_5_PRIME resilin	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_inv
2L	22429762	2L_22429762_SNP [dm3] 2L_22537030_SNP [dm6]	A	T	9.207e^-5	1	UPSTREAM RpL5 & 1 other INTERGENIC	TF binding site mE1_TFBS_Ubx
2L	22429763	2L_22429763_SNP [dm3] 2L_22537031_SNP [dm6]	A	C	9.207e^-5	1	UPSTREAM RpL5 & 1 other INTERGENIC	TF binding site mE1_TFBS_Ubx
3L	21228075	3L_21228075_SNP [dm3] 3L_21234975_SNP [dm6]	G	A	9.250e^-5	1	INTRON Eip78C
2L	7289611	2L_7289611_SNP [dm3] 2L_7289611_SNP [dm6]	G	A	9.342e^-5	1	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
2L	12293898	2L_12293898_SNP [dm3] 2L_12293898_SNP [dm6]	C	G	9.437e^-5	1	INTRON aret
X	8084719	X_8084719_SNP [dm3] X_8190686_SNP [dm6]	A	C	9.622e^-5	1	INTRON sdt
2R	11340718	2R_11340718_SNP [dm3] 2R_15453213_SNP [dm6]	A	C	1.048e^-4	1	INTRON CG43729
2L	20718615	2L_20718615_SNP [dm3] 2L_20718615_SNP [dm6]	T	G	1.058e^-4	1	INTERGENIC
2R	4030434	2R_4030434_SNP [dm3] 2R_8142929_SNP [dm6]	A	C	1.061e^-4	1	UTR_5_PRIME Lpin UPSTREAM Lpin	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	10959828	3L_10959828_SNP [dm3] 3L_10966728_SNP [dm6]	G	A	1.083e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
2R	8372389	2R_8372389_SNP [dm3] 2R_12484884_SNP [dm6]	G	A	1.090e^-4	1	SYNONYMOUS_CODING Dh44-R2
X	18078006	X_18078006_INS [dm3] X_18183973_INS [dm6]	C	CT	1.104e^-4	1	INTRON Frq2
3R	13964446	3R_13964446_SNP [dm3] 3R_18138724_SNP [dm6]	A	G	1.120e^-4	1	INTERGENIC
3L	5052763	3L_5052763_SNP [dm3] 3L_5052763_SNP [dm6]	G	A	1.146e^-4	1	INTRON Con
X	18078005	X_18078005_SNP [dm3] X_18183972_SNP [dm6]	C	G	1.159e^-4	1	INTRON Frq2
3L	21228071	3L_21228071_SNP [dm3] 3L_21234971_SNP [dm6]	C	G	1.170e^-4	1	INTRON Eip78C
3R	5681601	3R_5681601_SNP [dm3] 3R_9855879_SNP [dm6]	A	T	1.176e^-4	1	INTRON Teh1
2L	7400346	2L_7400346_SNP [dm3] 2L_7400346_SNP [dm6]	G	A	1.188e^-4	1	UPSTREAM CG5171 DOWNSTREAM CR44079 INTERGENIC
2L	14433822	2L_14433822_SNP [dm3] 2L_14433822_SNP [dm6]	G	T	1.189e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	18682629	3L_18682629_SNP [dm3] 3L_18689529_SNP [dm6]	A	T	1.192e^-4	1	INTERGENIC
2L	22430958	2L_22430958_SNP [dm3] 2L_22538226_SNP [dm6]	A	G	1.192e^-4	1	UTR_5_PRIME CG17490 UPSTREAM CG17490	TF binding site mE1_TFBS_Ubx
3L	11196824	3L_11196824_SNP [dm3] 3L_11203724_SNP [dm6]	A	C	1.202e^-4	1	INTRON Plod
2R	12358253	2R_12358253_SNP [dm3] 2R_16470748_SNP [dm6]	A	T	1.212e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	5474860	3R_5474860_SNP [dm3] 3R_9649138_SNP [dm6]	A	T	1.232e^-4	1	NON_SYNONYMOUS_CODING Dh44
3L	21276512	3L_21276512_SNP [dm3] 3L_21283412_SNP [dm6]	T	C	1.244e^-4	1	NON_SYNONYMOUS_CODING CG12974	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	16874376	3L_16874376_SNP [dm3] 3L_16881276_SNP [dm6]	T	C	1.250e^-4	1	INTRON Lmpt
3R	5962131	3R_5962131_SNP [dm3] 3R_10136409_SNP [dm6]	C	T	1.258e^-4	1	INTRON tws
X	14759507	X_14759507_SNP [dm3] X_14865474_SNP [dm6]	C	A	1.269e^-4	1	SYNONYMOUS_CODING CG9518 INTRON Flo2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
2L	6525585	2L_6525585_SNP [dm3] 2L_6525585_SNP [dm6]	G	A	1.300e^-4	1	INTRON CG31637	TF binding site mE1_TFBS_sens
3L	502314	3L_502314_INS [dm3] 3L_502314_INS [dm6]	A	ACCA	1.305e^-4	1	DOWNSTREAM CG34268 INTRON klar
3R	12313085	3R_12313085_SNP [dm3] 3R_16487363_SNP [dm6]	C	A	1.322e^-4	1	INTRON Cad89D
2R	8371747	2R_8371747_DEL [dm3] 2R_12484242_DEL [dm6]	TTT	T	1.349e^-4	1	INTRON Dh44-R2
2R	17806825	2R_17806825_SNP [dm3] 2R_21919320_SNP [dm6]	T	C	1.351e^-4	1	INTRON Fili
3L	5135695	3L_5135695_INS [dm3] 3L_5142595_INS [dm6]	G	GG	1.357e^-4	1	UPSTREAM CG10672 INTRON CG4623
2R	8372392	2R_8372392_SNP [dm3] 2R_12484887_SNP [dm6]	T	C	1.411e^-4	1	SYNONYMOUS_CODING Dh44-R2
2R	18713411	2R_18713411_SNP [dm3] 2R_22825888_SNP [dm6]	T	C	1.436e^-4	1	SYNONYMOUS_CODING CG30274 INTRON CG42284	TF binding site mE1_TFBS_HSA
2R	8372991	2R_8372991_SNP [dm3] 2R_12485486_SNP [dm6]	A	C	1.443e^-4	1	SPLICE_SITE_REGION Dh44-R2 INTRON Dh44-R2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	24125239	3R_24125239_SNP [dm3] 3R_28299517_SNP [dm6]	T	C	1.470e^-4	1	INTERGENIC
3L	13093838	3L_13093838_SNP [dm3] 3L_13100738_SNP [dm6]	A	G	1.483e^-4	1	DOWNSTREAM CR44554 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9827648	2L_9827648_SNP [dm3] 2L_9827648_SNP [dm6]	C	G	1.529e^-4	1	INTRON nAChRalpha6
3R	15513497	3R_15513497_SNP [dm3] 3R_19687775_SNP [dm6]	C	T	1.548e^-4	1	INTRON Naam
X	3928752	X_3928752_DEL [dm3] X_4034719_DEL [dm6]	CC	C	1.557e^-4	1	INTERGENIC
3L	5094713	3L_5094713_SNP [dm3] 3L_5094713_SNP [dm6]	G	A	1.561e^-4	1	INTERGENIC
3L	16872533	3L_16872533_SNP [dm3] 3L_16879433_SNP [dm6]	C	T	1.570e^-4	1	DOWNSTREAM CG32170 INTRON Lmpt
3R	24026981	3R_24026981_SNP [dm3] 3R_28201259_SNP [dm6]	G	A	1.595e^-4	1	INTRON CG34354
2L	6541770	2L_6541770_SNP [dm3] 2L_6541770_SNP [dm6]	T	G	1.597e^-4	1	INTRON eya	TF binding site mE1_TFBS_inv mE1_TFBS_Kr
3L	21283872	3L_21283872_SNP [dm3] 3L_21290772_SNP [dm6]	T	A	1.612e^-4	1	DOWNSTREAM pzg INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	11361029	3L_11361029_SNP [dm3] 3L_11367929_SNP [dm6]	A	C	1.614e^-4	1	INTERGENIC
X	16244053	X_16244053_SNP [dm3] X_16350020_SNP [dm6]	G	A	1.622e^-4	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
X	7431791	X_7431791_SNP [dm3] X_7537758_SNP [dm6]	G	A	1.625e^-4	1	UPSTREAM CG32720 INTRON CG32719	TF binding site mE1_TFBS_inv mE1_TFBS_Trl
2L	7069158	2L_7069158_SNP [dm3] 2L_7069158_SNP [dm6]	G	A	1.639e^-4	1	SYNONYMOUS_CODING CG11289 DOWNSTREAM Pvf2	TF binding site mE1_TFBS_sens
X	7432306	X_7432306_SNP [dm3] X_7538273_SNP [dm6]	C	T	1.657e^-4	1	INTRON CG32719	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	11196770	3L_11196770_SNP [dm3] 3L_11203670_SNP [dm6]	T	C	1.662e^-4	1	SPLICE_SITE_REGION Plod SYNONYMOUS_CODING Plod
X	15072799	X_15072799_SNP [dm3] X_15178766_SNP [dm6]	C	A	1.678e^-4	1	NON_SYNONYMOUS_CODING CG43737	TF binding site mE1_TFBS_chinmo
2L	6541936	2L_6541936_SNP [dm3] 2L_6541936_SNP [dm6]	A	G	1.690e^-4	1	INTRON eya	TF binding site mE1_TFBS_inv mE1_TFBS_Kr
3L	2675756	3L_2675756_SNP [dm3] 3L_2675756_SNP [dm6]	C	T	1.702e^-4	1	INTRON Fife
2L	16913827	2L_16913827_SNP [dm3] 2L_16913827_SNP [dm6]	A	G	1.715e^-4	1	SYNONYMOUS_CODING tweek	TF binding site mE1_TFBS_sens
2R	15039854	2R_15039854_SNP [dm3] 2R_19152349_SNP [dm6]	T	G	1.749e^-4	1	INTRON ena
2R	16561850	2R_16561850_SNP [dm3] 2R_20674345_SNP [dm6]	G	A	1.756e^-4	1	DOWNSTREAM CG30152 INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	19249368	2L_19249368_SNP [dm3] 2L_19249368_SNP [dm6]	C	T	1.761e^-4	1	INTERGENIC
2L	21765654	2L_21765654_SNP [dm3] 2L_21765654_SNP [dm6]	T	G	1.776e^-4	1	INTRON CG31612	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	18828695	3L_18828695_SNP [dm3] 3L_18835595_SNP [dm6]	G	A	1.780e^-4	1	INTRON Indy	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	11361034	3L_11361034_SNP [dm3] 3L_11367934_SNP [dm6]	G	A	1.781e^-4	1	INTERGENIC
2R	4226138	2R_4226138_SNP [dm3] 2R_8338633_SNP [dm6]	A	G	1.785e^-4	1	INTRON pdm3
2R	12623569	2R_12623569_DEL [dm3] 2R_16736064_DEL [dm6]	AC	A	1.801e^-4	1	DOWNSTREAM CG43104 INTERGENIC
2L	8485526	2L_8485526_SNP [dm3] 2L_8485526_SNP [dm6]	C	T	1.832e^-4	1	UPSTREAM unsRNA:d-a INTRON d
2L	22426491	2L_22426491_SNP [dm3] 2L_22533759_SNP [dm6]	T	C	1.842e^-4	1	UTR_3_PRIME RpL5 DOWNSTREAM RpL5
2R	7694032	2R_7694032_SNP [dm3] 2R_11806527_SNP [dm6]	A	G	1.845e^-4	1	INTRON ths
2L	7289610	2L_7289610_SNP [dm3] 2L_7289610_SNP [dm6]	A	G	1.845e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
2R	8375091	2R_8375091_SNP [dm3] 2R_12487586_SNP [dm6]	A	G	1.846e^-4	1	UTR_3_PRIME Dh44-R2 & 1 other UPSTREAM CG34234 DOWNSTREAM Dh44-R2 & 1 other
2R	18712161	2R_18712161_SNP [dm3] 2R_22824638_SNP [dm6]	C	T	1.850e^-4	1	SYNONYMOUS_CODING CG42284 UPSTREAM CG30274 & 1 other
X	7436549	X_7436549_SNP [dm3] X_7542516_SNP [dm6]	G	T	1.851e^-4	1	INTRON CG32719	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	21531745	3R_21531745_SNP [dm3] 3R_25706023_SNP [dm6]	G	A	1.865e^-4	1	NON_SYNONYMOUS_CODING LpR2 INTRON LpR2
3L	2256741	3L_2256741_SNP [dm3] 3L_2256741_SNP [dm6]	C	T	1.867e^-4	1	UTR_5_PRIME CG1275 UPSTREAM CG1275 & 1 other INTRON CG1275
3L	11512917	3L_11512917_SNP [dm3] 3L_11519817_SNP [dm6]	C	T	1.910e^-4	1	SYNONYMOUS_CODING Fuca DOWNSTREAM CG7512
X	7989741	X_7989741_SNP [dm3] X_8095708_SNP [dm6]	C	G	1.926e^-4	1	UTR_3_PRIME CG2258 DOWNSTREAM CG2258
3L	5486958	3L_5486958_SNP [dm3] 3L_5493858_SNP [dm6]	A	G	1.965e^-4	1	EXON CR44520
2R	12358256	2R_12358256_SNP [dm3] 2R_16470751_SNP [dm6]	C	T	1.975e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	1604214	3L_1604214_SNP [dm3] 3L_1604214_SNP [dm6]	T	C	1.985e^-4	1	NON_SYNONYMOUS_CODING CG18170 UTR_5_PRIME CG33791 UPSTREAM CG33791
3L	11512914	3L_11512914_SNP [dm3] 3L_11519814_SNP [dm6]	T	C	2.054e^-4	1	SYNONYMOUS_CODING Fuca DOWNSTREAM CG7512
3L	12866057	3L_12866057_SNP [dm3] 3L_12872957_SNP [dm6]	G	A	2.057e^-4	1	INTERGENIC
X	16804811	X_16804811_SNP [dm3] X_16910778_SNP [dm6]	T	A	2.101e^-4	1	INTRON CR44754
3L	17723119	3L_17723119_SNP [dm3] 3L_17730019_SNP [dm6]	G	T	2.111e^-4	1	UPSTREAM CG6052 INTRON Ccn
3L	17723143	3L_17723143_SNP [dm3] 3L_17730043_SNP [dm6]	C	T	2.111e^-4	1	UPSTREAM CG6052 INTRON Ccn
3L	11579759	3L_11579759_SNP [dm3] 3L_11586659_SNP [dm6]	C	G	2.121e^-4	1	INTRON rt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	10903448	X_10903448_SNP [dm3] X_11009415_SNP [dm6]	T	C	2.124e^-4	1	INTRON CG42339
2L	8304601	2L_8304601_SNP [dm3] 2L_8304601_SNP [dm6]	A	T	2.181e^-4	1	UPSTREAM CG7840 INTRON Scgalpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	3093954	2L_3093954_SNP [dm3] 2L_3093954_SNP [dm6]	G	A	2.201e^-4	1	INTRON toc
2L	6025931	2L_6025931_SNP [dm3] 2L_6025931_SNP [dm6]	G	C	2.210e^-4	1	UTR_3_PRIME CG9109
3L	12162952	3L_12162952_MNP [dm3] 3L_12169852_MNP [dm6]	AAA	GTG	2.256e^-4	1	INTRON Rh7
X	4185158	X_4185158_SNP [dm3] X_4291125_SNP [dm6]	G	C	2.258e^-4	1	INTERGENIC
2R	15264391	2R_15264391_DEL [dm3] 2R_19376886_DEL [dm6]	TATTGTTTGGCT...	T	2.263e^-4	1	INTRON CG10062
3R	15513723	3R_15513723_SNP [dm3] 3R_19688001_SNP [dm6]	G	A	2.275e^-4	1	INTRON Naam
3R	26603570	3R_26603570_SNP [dm3] 3R_30777848_SNP [dm6]	T	A	2.276e^-4	1	INTRON zfh1	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	12799488	X_12799488_SNP [dm3] X_12905455_SNP [dm6]	C	G	2.282e^-4	1	INTRON CG4404	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	10659992	2L_10659992_SNP [dm3] 2L_10659992_SNP [dm6]	A	C	2.287e^-4	1	INTERGENIC
2R	8259794	2R_8259794_SNP [dm3] 2R_12372289_SNP [dm6]	A	G	2.303e^-4	1	INTRON CG13160	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	9084310	2R_9084310_SNP [dm3] 2R_13196805_SNP [dm6]	T	G	2.305e^-4	1	INTRON Kdm4B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
2L	22424886	2L_22424886_SNP [dm3] 2L_22532154_SNP [dm6]	G	C	2.322e^-4	1	DOWNSTREAM RpL5 INTERGENIC
2R	16793850	2R_16793850_SNP [dm3] 2R_20906345_SNP [dm6]	T	C	2.328e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_zfh1
2R	8368651	2R_8368651_SNP [dm3] 2R_12481146_SNP [dm6]	G	C	2.331e^-4	1	SYNONYMOUS_CODING Dh44-R2
3R	2982202	3R_2982202_SNP [dm3] 3R_7156480_SNP [dm6]	T	A	2.346e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3L	11361055	3L_11361055_SNP [dm3] 3L_11367955_SNP [dm6]	G	T	2.353e^-4	1	INTERGENIC
2L	7233879	2L_7233879_SNP [dm3] 2L_7233879_SNP [dm6]	G	A	2.375e^-4	1	INTRON Ndae1
2R	16561911	2R_16561911_SNP [dm3] 2R_20674406_SNP [dm6]	G	A	2.376e^-4	1	DOWNSTREAM CG30152 INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	11130629	3L_11130629_SNP [dm3] 3L_11137529_SNP [dm6]	C	T	2.381e^-4	1	INTRON CG32082
2L	19386039	2L_19386039_SNP [dm3] 2L_19386039_SNP [dm6]	T	G	2.386e^-4	1	INTRON fon
2R	14934760	2R_14934760_SNP [dm3] 2R_19047255_SNP [dm6]	A	T	2.423e^-4	1	INTERGENIC
X	16244040	X_16244040_SNP [dm3] X_16350007_SNP [dm6]	T	G	2.427e^-4	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
X	18929082	X_18929082_SNP [dm3] X_19035049_SNP [dm6]	T	A	2.436e^-4	1	INTERGENIC
2R	14935435	2R_14935435_SNP [dm3] 2R_19047930_SNP [dm6]	G	C	2.436e^-4	1	INTERGENIC
X	16244027	X_16244027_MNP [dm3] X_16349994_MNP [dm6]	AGC	TAA	2.440e^-4	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
3L	10853709	3L_10853709_DEL [dm3] 3L_10860609_DEL [dm6]	TATGTTTAT	T	2.442e^-4	1	INTRON tna	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
X	3864545	X_3864545_SNP [dm3] X_3970512_SNP [dm6]	T	C	2.444e^-4	1	SYNONYMOUS_CODING CG6414 EXON CR45481
3L	5681540	3L_5681540_SNP [dm3] 3L_5688440_SNP [dm6]	G	C	2.449e^-4	1	INTRON sif
2R	13325101	2R_13325101_SNP [dm3] 2R_17437596_SNP [dm6]	A	C	2.454e^-4	1	INTRON EDTP
3L	11207022	3L_11207022_SNP [dm3] 3L_11213922_SNP [dm6]	A	G	2.456e^-4	1	UTR_3_PRIME CG7600 UPSTREAM CG42671	TF binding site mE1_TFBS_cad
3L	18641675	3L_18641675_SNP [dm3] 3L_18648575_SNP [dm6]	G	T	2.467e^-4	1	INTRON MYPT-75D	TF binding site BDTNP1_TFBS_twi
2L	3016742	2L_3016742_SNP [dm3] 2L_3016742_SNP [dm6]	A	T	2.473e^-4	1	UTR_3_PRIME CG17224 DOWNSTREAM CG17265
2R	3648630	2R_3648630_SNP [dm3] 2R_7761125_SNP [dm6]	G	T	2.474e^-4	1	INTRON CG30497 & 1 other
3L	5685961	3L_5685961_SNP [dm3] 3L_5692861_SNP [dm6]	C	A	2.475e^-4	1	INTRON sif
2L	7390924	2L_7390924_SNP [dm3] 2L_7390924_SNP [dm6]	A	T	2.477e^-4	1	DOWNSTREAM CG5160 & 1 other INTERGENIC
3L	10984908	3L_10984908_SNP [dm3] 3L_10991808_SNP [dm6]	G	C	2.523e^-4	1	INTRON klu	TF binding site BDTNP1_TFBS_dl
3L	10984910	3L_10984910_SNP [dm3] 3L_10991810_SNP [dm6]	C	T	2.523e^-4	1	INTRON klu	TF binding site BDTNP1_TFBS_dl
3L	10984924	3L_10984924_SNP [dm3] 3L_10991824_SNP [dm6]	T	A	2.523e^-4	1	INTRON klu	TF binding site BDTNP1_TFBS_dl
3L	5487076	3L_5487076_SNP [dm3] 3L_5493976_SNP [dm6]	G	T	2.530e^-4	1	EXON CR44520
2L	8530814	2L_8530814_DEL [dm3] 2L_8530814_DEL [dm6]	CACAC	C	2.562e^-4	1	INTRON CG17834
3L	13093831	3L_13093831_SNP [dm3] 3L_13100731_SNP [dm6]	T	G	2.563e^-4	1	DOWNSTREAM CR44554 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8612953	3L_8612953_SNP [dm3] 3L_8619853_SNP [dm6]	A	T	2.594e^-4	1	UPSTREAM S-Lap2 DOWNSTREAM S-Lap1 INTERGENIC
3R	15793183	3R_15793183_SNP [dm3] 3R_19967461_SNP [dm6]	A	T	2.603e^-4	1	INTRON Hs6st
2R	14935449	2R_14935449_INS [dm3] 2R_19047944_INS [dm6]	T	TCTAAAGATTTATGTAAAC...	2.609e^-4	1	INTERGENIC
3L	11363508	3L_11363508_SNP [dm3] 3L_11370408_SNP [dm6]	A	T	2.682e^-4	1	INTERGENIC
2R	12668044	2R_12668044_SNP [dm3] 2R_16780539_SNP [dm6]	A	C	2.692e^-4	1	UTR_5_PRIME resilin	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_inv
3L	17593846	3L_17593846_SNP [dm3] 3L_17600746_SNP [dm6]	C	T	2.712e^-4	1	INTRON Eip74EF
2R	14935447	2R_14935447_SNP [dm3] 2R_19047942_SNP [dm6]	A	T	2.716e^-4	1	INTERGENIC
3R	10888365	3R_10888365_SNP [dm3] 3R_15062643_SNP [dm6]	G	A	2.754e^-4	1	INTRON dpr9
2L	14977710	2L_14977710_SNP [dm3] 2L_14977710_SNP [dm6]	T	A	2.756e^-4	1	INTRON mol
2L	6524805	2L_6524805_SNP [dm3] 2L_6524805_SNP [dm6]	T	A	2.781e^-4	1	INTRON CG31637
2R	8366265	2R_8366265_SNP [dm3] 2R_12478760_SNP [dm6]	A	C	2.786e^-4	1	INTRON Dh44-R2
X	14759453	X_14759453_SNP [dm3] X_14865420_SNP [dm6]	G	A	2.816e^-4	1	SYNONYMOUS_CODING CG9518 INTRON Flo2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
3L	5633027	3L_5633027_INS [dm3] 3L_5639927_INS [dm6]	T	TTT	2.832e^-4	1	INTRON Blimp-1
X	13270022	X_13270022_SNP [dm3] X_13375989_SNP [dm6]	A	G	2.832e^-4	1	INTRON CG1640	TF binding site mE1_TFBS_inv
3R	14428897	3R_14428897_SNP [dm3] 3R_18603175_SNP [dm6]	T	A	2.862e^-4	1	INTRON qin & 1 other
2L	8666256	2L_8666256_SNP [dm3] 2L_8666256_SNP [dm6]	T	C	2.875e^-4	1	SYNONYMOUS_CODING Sema-1a UTR_3_PRIME Sema-1a	TF binding site mE1_TFBS_cad
3R	16253639	3R_16253639_INS [dm3] 3R_20427917_INS [dm6]	T	TT	2.897e^-4	1	INTRON Gfrl
2L	8485573	2L_8485573_SNP [dm3] 2L_8485573_SNP [dm6]	T	A	2.919e^-4	1	UPSTREAM unsRNA:d-a INTRON d
2L	6603363	2L_6603363_SNP [dm3] 2L_6603363_SNP [dm6]	T	G	2.936e^-4	1	INTERGENIC
3L	13454482	3L_13454482_SNP [dm3] 3L_13461382_SNP [dm6]	G	T	2.936e^-4	1	INTRON CG10738	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	14935448	2R_14935448_SNP [dm3] 2R_19047943_SNP [dm6]	G	T	2.979e^-4	1	INTERGENIC
2L	9920258	2L_9920258_SNP [dm3] 2L_9920258_SNP [dm6]	G	C	2.990e^-4	1	DOWNSTREAM CG4598 INTRON CG4594
3R	13780341	3R_13780341_SNP [dm3] 3R_17954619_SNP [dm6]	G	C	2.999e^-4	1	INTRON cpo	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	19191739	X_19191739_SNP [dm3] X_19297706_SNP [dm6]	A	T	3.025e^-4	1	UTR_5_PRIME CG8034	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_Trl
3L	14845278	3L_14845278_SNP [dm3] 3L_14852178_SNP [dm6]	T	C	3.031e^-4	1	INTRON CG17839
3R	6502177	3R_6502177_SNP [dm3] 3R_10676455_SNP [dm6]	T	C	3.067e^-4	1	SYNONYMOUS_CODING CG6465
X	13349305	X_13349305_SNP [dm3] X_13455272_SNP [dm6]	T	A	3.072e^-4	1	INTRON Neto
3R	9352324	3R_9352324_SNP [dm3] 3R_13526602_SNP [dm6]	A	G	3.074e^-4	1	INTERGENIC
2L	18559704	2L_18559704_DEL [dm3] 2L_18559704_DEL [dm6]	TT	A	3.079e^-4	1	INTRON Pde11	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	12623592	2R_12623592_SNP [dm3] 2R_16736087_SNP [dm6]	G	C	3.092e^-4	1	DOWNSTREAM CG43104 INTERGENIC
2L	15272082	2L_15272082_SNP [dm3] 2L_15272082_SNP [dm6]	G	T	3.097e^-4	1	UPSTREAM Cul3 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	11170134	2L_11170134_SNP [dm3] 2L_11170134_SNP [dm6]	T	C	3.102e^-4	1	INTRON Ca-beta
3L	13936409	3L_13936409_SNP [dm3] 3L_13943309_SNP [dm6]	G	A	3.102e^-4	1	INTRON CG32137
3R	6402228	3R_6402228_SNP [dm3] 3R_10576506_SNP [dm6]	G	A	3.115e^-4	1	INTRON hth	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	16804805	X_16804805_SNP [dm3] X_16910772_SNP [dm6]	T	A	3.117e^-4	1	INTRON CR44754
3L	18923941	3L_18923941_DEL [dm3] 3L_18930841_DEL [dm6]	TT	T	3.119e^-4	1	INTRON CG32204
X	7441444	X_7441444_SNP [dm3] X_7547411_SNP [dm6]	T	A	3.138e^-4	1	INTRON CG32719
3L	5401961	3L_5401961_SNP [dm3] 3L_5408861_SNP [dm6]	C	T	3.142e^-4	1	INTERGENIC
3L	13936408	3L_13936408_SNP [dm3] 3L_13943308_SNP [dm6]	T	G	3.146e^-4	1	INTRON CG32137
2L	15959048	2L_15959048_SNP [dm3] 2L_15959048_SNP [dm6]	A	G	3.158e^-4	1	INTRON beat-Ib & 1 other
2R	5235871	2R_5235871_SNP [dm3] 2R_9348366_SNP [dm6]	G	A	3.162e^-4	1	UTR_3_PRIME Or45a INTRON CG13954 & 1 other
2L	20532470	2L_20532470_SNP [dm3] 2L_20532470_SNP [dm6]	G	A	3.171e^-4	1	DOWNSTREAM CG44270 INTERGENIC
2R	10663180	2R_10663180_SNP [dm3] 2R_14775675_SNP [dm6]	G	C	3.172e^-4	1	SYNONYMOUS_CODING kn	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	14723788	3L_14723788_SNP [dm3] 3L_14730688_SNP [dm6]	A	T	3.174e^-4	1	INTRON ome
2R	8372540	2R_8372540_SNP [dm3] 2R_12485035_SNP [dm6]	C	G	3.175e^-4	1	SYNONYMOUS_CODING Dh44-R2
3L	7484201	3L_7484201_SNP [dm3] 3L_7491101_SNP [dm6]	C	T	3.184e^-4	1	UPSTREAM Cyp316a1 INTERGENIC
2L	3016707	2L_3016707_SNP [dm3] 2L_3016707_SNP [dm6]	G	A	3.186e^-4	1	UTR_3_PRIME CG17224 DOWNSTREAM CG17265
2L	8845235	2L_8845235_SNP [dm3] 2L_8845235_SNP [dm6]	T	A	3.194e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2L	8845237	2L_8845237_SNP [dm3] 2L_8845237_SNP [dm6]	C	T	3.194e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2R	869764	2R_869764_SNP [dm3] 2R_4982259_SNP [dm6]	C	T	3.197e^-4	1	INTRON Ir41a	transposable element FlyBase
2R	8938988	2R_8938988_SNP [dm3] 2R_13051483_SNP [dm6]	T	C	3.199e^-4	1	INTERGENIC
3R	17075192	3R_17075192_SNP [dm3] 3R_21249470_SNP [dm6]	G	C	3.236e^-4	1	INTRON ETHR
2R	14517058	2R_14517058_SNP [dm3] 2R_18629553_SNP [dm6]	C	A	3.237e^-4	1	DOWNSTREAM CG5482 & 1 other INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
3R	8617915	3R_8617915_SNP [dm3] 3R_12792193_SNP [dm6]	G	A	3.261e^-4	1	INTERGENIC
2R	3679304	2R_3679304_SNP [dm3] 2R_7791799_SNP [dm6]	T	C	3.283e^-4	1	DOWNSTREAM Gapdh1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	8597356	3R_8597356_SNP [dm3] 3R_12771634_SNP [dm6]	T	A	3.295e^-4	1	INTRON beat-Vc
3R	8598388	3R_8598388_SNP [dm3] 3R_12772666_SNP [dm6]	C	A	3.295e^-4	1	INTRON beat-Vc
3L	11361124	3L_11361124_SNP [dm3] 3L_11368024_SNP [dm6]	G	T	3.303e^-4	1	INTERGENIC
2R	16135144	2R_16135144_SNP [dm3] 2R_20247639_SNP [dm6]	A	T	3.327e^-4	1	UPSTREAM ppk6 DOWNSTREAM CG9864 INTERGENIC
2L	16906039	2L_16906039_SNP [dm3] 2L_16906039_SNP [dm6]	G	A	3.331e^-4	1	SYNONYMOUS_CODING tweek
2L	19454706	2L_19454706_SNP [dm3] 2L_19454706_SNP [dm6]	T	G	3.333e^-4	1	UPSTREAM CG10026 INTRON CG10026	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	13736394	2R_13736394_SNP [dm3] 2R_17848889_SNP [dm6]	G	C	3.337e^-4	1	DOWNSTREAM olf186-M INTRON olf186-F
2L	8485535	2L_8485535_SNP [dm3] 2L_8485535_SNP [dm6]	A	T	3.342e^-4	1	UPSTREAM unsRNA:d-a INTRON d
2L	8485561	2L_8485561_SNP [dm3] 2L_8485561_SNP [dm6]	C	A	3.342e^-4	1	UPSTREAM unsRNA:d-a INTRON d
2R	8375436	2R_8375436_SNP [dm3] 2R_12487931_SNP [dm6]	A	G	3.346e^-4	1	UTR_3_PRIME Dh44-R2 & 1 other UPSTREAM CG34234 DOWNSTREAM fdl
2L	15261602	2L_15261602_SNP [dm3] 2L_15261602_SNP [dm6]	C	G	3.349e^-4	1	NON_SYNONYMOUS_CODING yuri INTRON yuri
3R	15195515	3R_15195515_SNP [dm3] 3R_19369793_SNP [dm6]	C	T	3.351e^-4	1	INTRON Ino80
3R	6762864	3R_6762864_SNP [dm3] 3R_10937142_SNP [dm6]	G	A	3.353e^-4	1	INTERGENIC
3R	13964575	3R_13964575_SNP [dm3] 3R_18138853_SNP [dm6]	A	T	3.355e^-4	1	INTERGENIC
X	9087087	X_9087087_SNP [dm3] X_9193054_SNP [dm6]	T	C	3.356e^-4	1	SYNONYMOUS_CODING CG12056 UPSTREAM CG12106 DOWNSTREAM CG12057	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk mE1_TFBS_Ubx
2R	16132997	2R_16132997_SNP [dm3] 2R_20245492_SNP [dm6]	T	C	3.387e^-4	1	UPSTREAM CG11208 DOWNSTREAM ppk6 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2R	4226168	2R_4226168_SNP [dm3] 2R_8338663_SNP [dm6]	A	T	3.387e^-4	1	INTRON pdm3
3L	21291838	3L_21291838_SNP [dm3] 3L_21298738_SNP [dm6]	A	G	3.407e^-4	1	UPSTREAM CG43702 & 1 other INTRON CG43702	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	10840246	2R_10840246_SNP [dm3] 2R_14952741_SNP [dm6]	G	A	3.409e^-4	1	INTRON aPKC
3L	12792543	3L_12792543_SNP [dm3] 3L_12799443_SNP [dm6]	A	G	3.416e^-4	1	INTRON Atg1
2L	20898121	2L_20898121_SNP [dm3] 2L_20898121_SNP [dm6]	A	G	3.452e^-4	1	INTRON sky & 1 other
3R	20197312	3R_20197312_INS [dm3] 3R_24371590_INS [dm6]	A	ATCCGAACAGAGCACA...	3.458e^-4	1	DOWNSTREAM CG13614 INTRON CG17782
3L	6369809	3L_6369809_SNP [dm3] 3L_6376709_SNP [dm6]	T	A	3.468e^-4	1	INTERGENIC
3L	21291801	3L_21291801_SNP [dm3] 3L_21298701_SNP [dm6]	A	T	3.471e^-4	1	UTR_5_PRIME CG43702 UPSTREAM CG43702 & 1 other	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	8618577	3R_8618577_SNP [dm3] 3R_12792855_SNP [dm6]	G	A	3.481e^-4	1	INTERGENIC
3R	16955131	3R_16955131_SNP [dm3] 3R_21129409_SNP [dm6]	A	G	3.501e^-4	1	UTR_3_PRIME CG5793 UPSTREAM Ice2 DOWNSTREAM CG5793 INTRON Obp93a
3R	17970150	3R_17970150_SNP [dm3] 3R_22144428_SNP [dm6]	G	T	3.505e^-4	1	INTRON SKIP
2L	9739025	2L_9739025_SNP [dm3] 2L_9739025_SNP [dm6]	A	G	3.549e^-4	1	INTRON Nckx30C
X	5680816	X_5680816_INS [dm3] X_5786783_INS [dm6]	T	TAATTTTGT	3.551e^-4	1	INTRON CG42699
3L	8833985	3L_8833985_SNP [dm3] 3L_8840885_SNP [dm6]	C	A	3.567e^-4	1	INTRON dally	TF binding site mE1_TFBS_HSA
3R	5441656	3R_5441656_SNP [dm3] 3R_9615934_SNP [dm6]	C	T	3.573e^-4	1	INTRON CG8312	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	21246265	3L_21246265_SNP [dm3] 3L_21253165_SNP [dm6]	C	A	3.603e^-4	1	INTRON Eip78C
X	9022720	X_9022720_SNP [dm3] X_9128687_SNP [dm6]	C	T	3.607e^-4	1	INTRON fend	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
3L	21386998	3L_21386998_SNP [dm3] 3L_21393898_SNP [dm6]	G	A	3.608e^-4	1	INTRON rgn
2L	16880283	2L_16880283_SNP [dm3] 2L_16880283_SNP [dm6]	C	T	3.616e^-4	1	UPSTREAM CG32832 & 1 other INTRON CG31743 & 1 other
2R	3643913	2R_3643913_SNP [dm3] 2R_7756408_SNP [dm6]	T	C	3.620e^-4	1	INTRON CG30497 & 1 other
2R	10717919	2R_10717919_SNP [dm3] 2R_14830414_SNP [dm6]	G	C	3.627e^-4	1	INTERGENIC
2R	16773607	2R_16773607_SNP [dm3] 2R_20886102_SNP [dm6]	T	C	3.628e^-4	1	INTRON otp
2L	6145943	2L_6145943_SNP [dm3] 2L_6145943_SNP [dm6]	G	C	3.631e^-4	1	DOWNSTREAM CG13991 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
3L	12897617	3L_12897617_SNP [dm3] 3L_12904517_SNP [dm6]	A	G	3.636e^-4	1	UPSTREAM CG32117 INTERGENIC
X	19603696	X_19603696_SNP [dm3] X_19709663_SNP [dm6]	C	T	3.647e^-4	1	INTRON meso18E
3L	6369807	3L_6369807_SNP [dm3] 3L_6376707_SNP [dm6]	A	C	3.653e^-4	1	INTERGENIC
X	16243985	X_16243985_SNP [dm3] X_16349952_SNP [dm6]	C	T	3.673e^-4	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
2R	13319268	2R_13319268_SNP [dm3] 2R_17431763_SNP [dm6]	G	A	3.677e^-4	1	NON_SYNONYMOUS_CODING Lhr UPSTREAM Bap55 DOWNSTREAM EDTP	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
2L	19249398	2L_19249398_SNP [dm3] 2L_19249398_SNP [dm6]	A	T	3.681e^-4	1	INTERGENIC
3L	620169	3L_620169_SNP [dm3] 3L_620169_SNP [dm6]	G	A	3.684e^-4	1	DOWNSTREAM CG43337 INTERGENIC
2L	7390952	2L_7390952_SNP [dm3] 2L_7390952_SNP [dm6]	A	G	3.708e^-4	1	DOWNSTREAM CG5160 & 1 other INTERGENIC
X	15548848	X_15548848_SNP [dm3] X_15654815_SNP [dm6]	A	C	3.748e^-4	1	INTERGENIC
3L	2237097	3L_2237097_SNP [dm3] 3L_2237097_SNP [dm6]	C	A	3.794e^-4	1	UPSTREAM ACXD & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
2R	10840294	2R_10840294_SNP [dm3] 2R_14952789_SNP [dm6]	T	A	3.795e^-4	1	INTRON aPKC
2L	9738994	2L_9738994_SNP [dm3] 2L_9738994_SNP [dm6]	G	T	3.811e^-4	1	INTRON Nckx30C
X	13309089	X_13309089_SNP [dm3] X_13415056_SNP [dm6]	T	C	3.829e^-4	1	SYNONYMOUS_CODING Set2	TF binding site mE1_TFBS_sens
2R	8373115	2R_8373115_SNP [dm3] 2R_12485610_SNP [dm6]	C	T	3.833e^-4	1	INTRON Dh44-R2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	6966132	3L_6966132_SNP [dm3] 3L_6973032_SNP [dm6]	C	T	3.836e^-4	1	UTR_3_PRIME Galphai UPSTREAM CG10063
X	21976879	X_21976879_SNP [dm3] X_22575043_SNP [dm6]	T	G	3.856e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16244006	X_16244006_SNP [dm3] X_16349973_SNP [dm6]	C	A	3.870e^-4	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
3L	2255756	3L_2255756_SNP [dm3] 3L_2255756_SNP [dm6]	C	A	3.935e^-4	1	NON_SYNONYMOUS_CODING CG1275 INTRON CG1275	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	24388631	3R_24388631_SNP [dm3] 3R_28562909_SNP [dm6]	T	C	3.975e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	12985342	2R_12985342_SNP [dm3] 2R_17097837_SNP [dm6]	G	A	3.988e^-4	1	UPSTREAM GstS1 INTRON GstS1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	7824249	2L_7824249_SNP [dm3] 2L_7824249_SNP [dm6]	A	G	3.989e^-4	1	SYNONYMOUS_CODING CG7115	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	16358958	2R_16358958_DEL [dm3] 2R_20471453_DEL [dm6]	ATATGTAA	A	3.995e^-4	1	DOWNSTREAM CG12484 INTRON CG12484
X	7442977	X_7442977_SNP [dm3] X_7548944_SNP [dm6]	G	A	4.018e^-4	1	UPSTREAM CG32719 INTERGENIC	TF binding site BDTNP1_TFBS_hb
X	7442979	X_7442979_SNP [dm3] X_7548946_SNP [dm6]	C	T	4.018e^-4	1	UPSTREAM CG32719 INTERGENIC	TF binding site BDTNP1_TFBS_hb
X	7443023	X_7443023_SNP [dm3] X_7548990_SNP [dm6]	T	G	4.018e^-4	1	UPSTREAM CG32719 INTERGENIC	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi
3L	5090375	3L_5090375_SNP [dm3] 3L_5090375_SNP [dm6]	C	T	4.027e^-4	1	INTERGENIC
2L	10569457	2L_10569457_SNP [dm3] 2L_10569457_SNP [dm6]	G	A	4.049e^-4	1	INTRON Trim9	TF binding site mE1_TFBS_HSA
2L	6535816	2L_6535816_SNP [dm3] 2L_6535816_SNP [dm6]	A	T	4.059e^-4	1	INTRON eya	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
2L	6894034	2L_6894034_SNP [dm3] 2L_6894034_SNP [dm6]	C	A	4.078e^-4	1	INTRON Nlg2
X	13823775	X_13823775_SNP [dm3] X_13929742_SNP [dm6]	A	G	4.116e^-4	1	INTRON mamo
3R	13784332	3R_13784332_SNP [dm3] 3R_17958610_SNP [dm6]	G	C	4.136e^-4	1	INTRON cpo
3R	20493424	3R_20493424_SNP [dm3] 3R_24667702_SNP [dm6]	G	A	4.139e^-4	1	UPSTREAM slo INTRON slo	regulatory region REDfly_CRMs
2L	3101989	2L_3101989_SNP [dm3] 2L_3101989_SNP [dm6]	T	A	4.151e^-4	1	INTRON toc
2R	3646980	2R_3646980_INS [dm3] 2R_7759475_INS [dm6]	T	TTT	4.170e^-4	1	UPSTREAM CG30497 & 1 other INTRON CG30497 & 1 other	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
3R	26781384	3R_26781384_SNP [dm3] 3R_30955662_SNP [dm6]	G	T	4.175e^-4	1	INTERGENIC
3R	26781385	3R_26781385_SNP [dm3] 3R_30955663_SNP [dm6]	A	G	4.175e^-4	1	INTERGENIC
3L	5609941	3L_5609941_SNP [dm3] 3L_5616841_SNP [dm6]	C	G	4.177e^-4	1	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	17876970	2R_17876970_SNP [dm3] 2R_21989465_SNP [dm6]	G	A	4.183e^-4	1	SYNONYMOUS_CODING CG34370	TF binding site mE1_TFBS_cad
2L	10625588	2L_10625588_SNP [dm3] 2L_10625588_SNP [dm6]	C	T	4.192e^-4	1	INTRON Trim9
3R	21498673	3R_21498673_SNP [dm3] 3R_25672951_SNP [dm6]	T	C	4.210e^-4	1	INTRON Lgr3
2R	12985325	2R_12985325_SNP [dm3] 2R_17097820_SNP [dm6]	T	A	4.210e^-4	1	UPSTREAM GstS1 INTRON GstS1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	9773366	3L_9773366_SNP [dm3] 3L_9780266_SNP [dm6]	G	A	4.222e^-4	1	INTRON CG8177
2L	11187234	2L_11187234_SNP [dm3] 2L_11187234_SNP [dm6]	A	T	4.238e^-4	1	INTRON Ca-beta
3L	1604208	3L_1604208_SNP [dm3] 3L_1604208_SNP [dm6]	T	A	4.247e^-4	1	NON_SYNONYMOUS_CODING CG18170 UTR_5_PRIME CG33791 UPSTREAM CG33791
3L	1604822	3L_1604822_SNP [dm3] 3L_1604822_SNP [dm6]	C	G	4.247e^-4	1	START_GAINED CG33791 UTR_5_PRIME CG33791 UTR_3_PRIME CG18170
2L	11910281	2L_11910281_SNP [dm3] 2L_11910281_SNP [dm6]	C	G	4.252e^-4	1	INTRON Pde1c
3L	5487030	3L_5487030_DEL [dm3] 3L_5493930_DEL [dm6]	CC	C	4.259e^-4	1	EXON CR44520
X	16244025	X_16244025_INS [dm3] X_16349992_INS [dm6]	A	AGTT	4.278e^-4	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
2L	11788041	2L_11788041_SNP [dm3] 2L_11788041_SNP [dm6]	C	T	4.286e^-4	1	UPSTREAM CG14931 INTERGENIC
X	21976558	X_21976558_SNP [dm3] X_22574722_SNP [dm6]	G	C	4.288e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	3966253	X_3966253_SNP [dm3] X_4072220_SNP [dm6]	C	T	4.292e^-4	1	INTERGENIC
X	3966255	X_3966255_SNP [dm3] X_4072222_SNP [dm6]	T	C	4.292e^-4	1	INTERGENIC
3L	6369805	3L_6369805_SNP [dm3] 3L_6376705_SNP [dm6]	T	A	4.295e^-4	1	INTERGENIC
3L	14071254	3L_14071254_SNP [dm3] 3L_14078154_SNP [dm6]	C	T	4.306e^-4	1	INTRON btl	regulatory region REDfly_CRMs
3L	9365067	3L_9365067_SNP [dm3] 3L_9371967_SNP [dm6]	A	G	4.316e^-4	1	SYNONYMOUS_CODING Hsp67Bc UPSTREAM Fdxh & 2 others	TF binding site mE1_TFBS_sens
2L	16845089	2L_16845089_SNP [dm3] 2L_16845089_SNP [dm6]	A	T	4.317e^-4	1	INTRON CG13284
2R	2506506	2R_2506506_SNP [dm3] 2R_6619001_SNP [dm6]	T	C	4.333e^-4	1	SYNONYMOUS_CODING jing	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	21285905	3L_21285905_SNP [dm3] 3L_21292805_SNP [dm6]	A	T	4.334e^-4	1	UPSTREAM Cpr78Ca INTERGENIC
X	13573828	X_13573828_SNP [dm3] X_13679795_SNP [dm6]	T	A	4.343e^-4	1	INTRON CG12177	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	13573830	X_13573830_SNP [dm3] X_13679797_SNP [dm6]	C	T	4.343e^-4	1	INTRON CG12177	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	13573844	X_13573844_SNP [dm3] X_13679811_SNP [dm6]	G	A	4.343e^-4	1	INTRON CG12177	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	13573849	X_13573849_SNP [dm3] X_13679816_SNP [dm6]	T	A	4.343e^-4	1	INTRON CG12177	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	6975347	2R_6975347_INS [dm3] 2R_11087842_INS [dm6]	T	TCGTCTAGGTT...	4.347e^-4	1	UPSTREAM CG43189 INTRON luna & 1 other	TF binding site mE1_TFBS_Kr
3R	685503	3R_685503_SNP [dm3] 3R_4859781_SNP [dm6]	G	T	4.372e^-4	1	INTRON opa	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	13549816	3L_13549816_SNP [dm3] 3L_13556716_SNP [dm6]	A	T	4.389e^-4	1	INTRON bru-3
2L	12294002	2L_12294002_SNP [dm3] 2L_12294002_SNP [dm6]	C	A	4.395e^-4	1	INTRON aret
2R	17904985	2R_17904985_SNP [dm3] 2R_22017480_SNP [dm6]	T	C	4.395e^-4	1	INTRON CG34370
3R	11209666	3R_11209666_SNP [dm3] 3R_15383944_SNP [dm6]	T	C	4.412e^-4	1	UPSTREAM h-cup INTRON Rbp
2R	3643912	2R_3643912_SNP [dm3] 2R_7756407_SNP [dm6]	C	G	4.422e^-4	1	INTRON CG30497 & 1 other
3R	16817557	3R_16817557_SNP [dm3] 3R_20991835_SNP [dm6]	A	C	4.443e^-4	1	INTRON Calx
2L	8506197	2L_8506197_SNP [dm3] 2L_8506197_SNP [dm6]	T	C	4.447e^-4	1	INTRON Dh31
3L	4814697	3L_4814697_SNP [dm3] 3L_4814697_SNP [dm6]	C	T	4.456e^-4	1	SYNONYMOUS_CODING Dhc64C	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	6507921	3R_6507921_SNP [dm3] 3R_10682199_SNP [dm6]	A	G	4.462e^-4	1	UPSTREAM CR44230 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8833981	3L_8833981_SNP [dm3] 3L_8840881_SNP [dm6]	T	A	4.473e^-4	1	INTRON dally	TF binding site mE1_TFBS_HSA
2L	10094760	2L_10094760_SNP [dm3] 2L_10094760_SNP [dm6]	G	A	4.483e^-4	1	INTRON CG44153 & 1 other
X	12730708	X_12730708_SNP [dm3] X_12836675_SNP [dm6]	G	C	4.488e^-4	1	INTRON Pde9
2R	1594599	2R_1594599_SNP [dm3] 2R_5707094_SNP [dm6]	T	G	4.496e^-4	1	UTR_3_PRIME ap DOWNSTREAM ap
2R	12796607	2R_12796607_SNP [dm3] 2R_16909102_SNP [dm6]	C	T	4.525e^-4	1	INTERGENIC
2L	19388885	2L_19388885_SNP [dm3] 2L_19388885_SNP [dm6]	C	T	4.536e^-4	1	INTRON CG17549
2R	4441348	2R_4441348_SNP [dm3] 2R_8553843_SNP [dm6]	G	A	4.553e^-4	1	INTERGENIC
2L	22430533	2L_22430533_SNP [dm3] 2L_22537801_SNP [dm6]	T	G	4.554e^-4	1	START_GAINED CG17490 UTR_5_PRIME CG17490 UPSTREAM RpL5 & 1 other	TF binding site mE1_TFBS_Ubx
3L	8802311	3L_8802311_SNP [dm3] 3L_8809211_SNP [dm6]	A	G	4.556e^-4	1	SYNONYMOUS_CODING CG13308 DOWNSTREAM CG32024
X	14430121	X_14430121_INS [dm3] X_14536088_INS [dm6]	A	AA	4.560e^-4	1	INTERGENIC
3L	11363505	3L_11363505_SNP [dm3] 3L_11370405_SNP [dm6]	T	A	4.590e^-4	1	INTERGENIC
3L	1604886	3L_1604886_SNP [dm3] 3L_1604886_SNP [dm6]	T	C	4.598e^-4	1	SYNONYMOUS_CODING CG33791 UTR_3_PRIME CG18170
3L	10757549	3L_10757549_SNP [dm3] 3L_10764449_SNP [dm6]	G	A	4.603e^-4	1	INTERGENIC	TF binding site mE1_TFBS_HSA
2R	12985331	2R_12985331_SNP [dm3] 2R_17097826_SNP [dm6]	A	T	4.615e^-4	1	UPSTREAM GstS1 INTRON GstS1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2R	17461259	2R_17461259_SNP [dm3] 2R_21573754_SNP [dm6]	C	A	4.631e^-4	1	INTRON CG10440
2L	8916136	2L_8916136_SNP [dm3] 2L_8916136_SNP [dm6]	T	C	4.641e^-4	1	INTRON CG34398
3L	21279719	3L_21279719_SNP [dm3] 3L_21286619_SNP [dm6]	A	G	4.672e^-4	1	SYNONYMOUS_CODING pzg UPSTREAM CG12974	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	22423033	2L_22423033_SNP [dm3] 2L_22530301_SNP [dm6]	C	T	4.678e^-4	1	INTERGENIC
3R	25623281	3R_25623281_SNP [dm3] 3R_29797559_SNP [dm6]	T	C	4.680e^-4	1	INTRON CG7837	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	16873792	3L_16873792_SNP [dm3] 3L_16880692_SNP [dm6]	A	C	4.681e^-4	1	INTRON Lmpt
3L	11106113	3L_11106113_SNP [dm3] 3L_11113013_SNP [dm6]	G	A	4.687e^-4	1	DOWNSTREAM CG7638 INTRON Sod	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	22424994	2L_22424994_DEL [dm3] 2L_22532262_DEL [dm6]	TGCGGCGG	T	4.696e^-4	1	DOWNSTREAM RpL5 INTERGENIC
2L	22421111	2L_22421111_SNP [dm3] 2L_22528379_SNP [dm6]	A	C	4.697e^-4	1	INTERGENIC
2R	8331413	2R_8331413_SNP [dm3] 2R_12443908_SNP [dm6]	T	G	4.700e^-4	1	INTRON Dyb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	8833989	3L_8833989_SNP [dm3] 3L_8840889_SNP [dm6]	T	C	4.702e^-4	1	INTRON dally	TF binding site mE1_TFBS_HSA
2R	12358249	2R_12358249_SNP [dm3] 2R_16470744_SNP [dm6]	C	A	4.707e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	11477710	3R_11477710_SNP [dm3] 3R_15651988_SNP [dm6]	G	A	4.735e^-4	1	INTERGENIC
3R	11477740	3R_11477740_SNP [dm3] 3R_15652018_SNP [dm6]	T	C	4.735e^-4	1	INTERGENIC
3R	11477744	3R_11477744_SNP [dm3] 3R_15652022_SNP [dm6]	A	G	4.735e^-4	1	INTERGENIC
3L	17589875	3L_17589875_SNP [dm3] 3L_17596775_SNP [dm6]	T	G	4.749e^-4	1	INTRON Eip74EF	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
3R	6508256	3R_6508256_SNP [dm3] 3R_10682534_SNP [dm6]	C	T	4.757e^-4	1	UPSTREAM CR44230 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	14517057	2R_14517057_SNP [dm3] 2R_18629552_SNP [dm6]	C	G	4.785e^-4	1	DOWNSTREAM CG5482 & 1 other INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
3L	5609944	3L_5609944_SNP [dm3] 3L_5616844_SNP [dm6]	C	A	4.795e^-4	1	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	11299478	X_11299478_SNP [dm3] X_11405445_SNP [dm6]	G	A	4.811e^-4	1	INTRON dlg1	TF binding site mE1_TFBS_HSA
3R	20197248	3R_20197248_SNP [dm3] 3R_24371526_SNP [dm6]	G	A	4.816e^-4	1	DOWNSTREAM CG13614 INTRON CG17782
2L	12851017	2L_12851017_SNP [dm3] 2L_12851017_SNP [dm6]	A	G	4.829e^-4	1	INTERGENIC
2R	17114619	2R_17114619_SNP [dm3] 2R_21227114_SNP [dm6]	T	G	4.883e^-4	1	INTRON ASPP
2R	8367692	2R_8367692_DEL [dm3] 2R_12480187_DEL [dm6]	TGGA	T	4.886e^-4	1	INTRON Dh44-R2
3L	9274600	3L_9274600_SNP [dm3] 3L_9281500_SNP [dm6]	A	T	4.888e^-4	1	INTRON GluRIB
X	21976569	X_21976569_SNP [dm3] X_22574733_SNP [dm6]	T	C	4.888e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	13964581	3R_13964581_SNP [dm3] 3R_18138859_SNP [dm6]	G	T	4.910e^-4	1	INTERGENIC
X	16344965	X_16344965_SNP [dm3] X_16450932_SNP [dm6]	A	T	4.939e^-4	1	INTRON Rbp2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	16431021	X_16431021_SNP [dm3] X_16536988_SNP [dm6]	C	A	4.950e^-4	1	INTERGENIC
3L	2227431	3L_2227431_SNP [dm3] 3L_2227431_SNP [dm6]	T	A	4.961e^-4	1	INTERGENIC
2L	17496768	2L_17496768_SNP [dm3] 2L_17496768_SNP [dm6]	G	T	4.962e^-4	1	UTR_5_PRIME qua UPSTREAM CR45715	TF binding site BDTNP1_TFBS_dl
3L	11418614	3L_11418614_SNP [dm3] 3L_11425514_SNP [dm6]	A	C	4.976e^-4	1	SYNONYMOUS_CODING CG7560	TF binding site mE1_TFBS_cad
2L	9278760	2L_9278760_SNP [dm3] 2L_9278760_SNP [dm6]	C	T	4.982e^-4	1	INTRON Ggamma30A
3R	17866955	3R_17866955_SNP [dm3] 3R_22041233_SNP [dm6]	A	C	4.991e^-4	1	UPSTREAM how INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_shn mE1_TFBS_cad mE1_TFBS_Trl
2R	13414698	2R_13414698_SNP [dm3] 2R_17527193_SNP [dm6]	G	T	4.996e^-4	1	INTRON Patronin
3L	1119735	3L_1119735_SNP [dm3] 3L_1119735_SNP [dm6]	C	T	5.008e^-4	1	INTERGENIC	TF binding site mE1_TFBS_cad
3L	15162393	3L_15162393_SNP [dm3] 3L_15169293_SNP [dm6]	T	G	5.022e^-4	1	INTERGENIC
3L	2608847	3L_2608847_SNP [dm3] 3L_2608847_SNP [dm6]	T	A	5.026e^-4	1	DOWNSTREAM Pxn INTRON Pxn
2L	10094773	2L_10094773_SNP [dm3] 2L_10094773_SNP [dm6]	G	C	5.029e^-4	1	INTRON CG44153 & 1 other
X	7443072	X_7443072_SNP [dm3] X_7549039_SNP [dm6]	A	G	5.040e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	8371767	2R_8371767_SNP [dm3] 2R_12484262_SNP [dm6]	T	A	5.042e^-4	1	INTRON Dh44-R2
2R	4229288	2R_4229288_SNP [dm3] 2R_8341783_SNP [dm6]	A	T	5.050e^-4	1	INTRON pdm3	TF binding site BDTNP1_TFBS_dl
X	7991857	X_7991857_DEL [dm3] X_8097824_DEL [dm6]	TATAAGTT	T	5.092e^-4	1	INTRON CG2258	TF binding site mE1_TFBS_cad
3L	11253384	3L_11253384_SNP [dm3] 3L_11260284_SNP [dm6]	T	C	5.095e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	3141273	X_3141273_SNP [dm3] X_3247240_SNP [dm6]	A	G	5.098e^-4	1	INTRON dnc
3R	13971708	3R_13971708_INS [dm3] 3R_18145986_INS [dm6]	G	GTA	5.101e^-4	1	INTERGENIC
3R	13971721	3R_13971721_SNP [dm3] 3R_18145999_SNP [dm6]	C	T	5.101e^-4	1	INTERGENIC
3L	12091497	3L_12091497_SNP [dm3] 3L_12098397_SNP [dm6]	G	T	5.101e^-4	1	INTERGENIC
2R	4571516	2R_4571516_SNP [dm3] 2R_8684011_SNP [dm6]	G	T	5.104e^-4	1	DOWNSTREAM Acsl & 1 other INTERGENIC
3R	19041840	3R_19041840_SNP [dm3] 3R_23216118_SNP [dm6]	T	C	5.129e^-4	1	INTRON cnc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_Trl
2R	8380117	2R_8380117_SNP [dm3] 2R_12492612_SNP [dm6]	A	C	5.145e^-4	1	INTRON fdl
3L	11106085	3L_11106085_SNP [dm3] 3L_11112985_SNP [dm6]	T	C	5.151e^-4	1	DOWNSTREAM CG7638 INTRON Sod	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	6106200	3R_6106200_SNP [dm3] 3R_10280478_SNP [dm6]	C	T	5.152e^-4	1	INTRON CG43143
2L	15261546	2L_15261546_SNP [dm3] 2L_15261546_SNP [dm6]	G	C	5.168e^-4	1	NON_SYNONYMOUS_CODING yuri INTRON yuri
X	14293741	X_14293741_SNP [dm3] X_14399708_SNP [dm6]	A	T	5.173e^-4	1	INTRON dpr8
2R	19025511	2R_19025511_SNP [dm3] 2R_23137988_SNP [dm6]	G	A	5.175e^-4	1	UPSTREAM CG30192 INTERGENIC
3R	22557583	3R_22557583_DEL [dm3] 3R_26731861_DEL [dm6]	AGAAACAGCAGCAGCG...	A	5.178e^-4	1	INTERGENIC	TF binding site mE1_TFBS_cad
2R	14906350	2R_14906350_SNP [dm3] 2R_19018845_SNP [dm6]	T	C	5.195e^-4	1	INTERGENIC
3R	4578642	3R_4578642_SNP [dm3] 3R_8752920_SNP [dm6]	C	G	5.203e^-4	1	NON_SYNONYMOUS_CODING CG8223 START_GAINED CG34135 UTR_5_PRIME CG34135 UTR_3_PRIME CG11768 UPSTREAM CG34135	TF binding site mE1_TFBS_cad
2R	8329119	2R_8329119_SNP [dm3] 2R_12441614_SNP [dm6]	A	T	5.218e^-4	1	UPSTREAM CG30334 INTRON Dyb
2L	15892399	2L_15892399_SNP [dm3] 2L_15892399_SNP [dm6]	A	T	5.219e^-4	1	SYNONYMOUS_CODING Tep1
2L	22425450	2L_22425450_SNP [dm3] 2L_22532718_SNP [dm6]	C	T	5.221e^-4	1	UTR_3_PRIME RpL5
2L	10463046	2L_10463046_SNP [dm3] 2L_10463046_SNP [dm6]	A	C	5.223e^-4	1	DOWNSTREAM RluA-1 & 1 other INTERGENIC
X	7442710	X_7442710_SNP [dm3] X_7548677_SNP [dm6]	T	A	5.244e^-4	1	UPSTREAM CG32719 INTERGENIC	TF binding site BDTNP1_TFBS_hb
2L	19249382	2L_19249382_SNP [dm3] 2L_19249382_SNP [dm6]	A	G	5.256e^-4	1	INTERGENIC
3L	11131676	3L_11131676_SNP [dm3] 3L_11138576_SNP [dm6]	A	T	5.270e^-4	1	INTRON CG32082
3L	11363519	3L_11363519_SNP [dm3] 3L_11370419_SNP [dm6]	T	A	5.271e^-4	1	INTERGENIC
2L	12016575	2L_12016575_SNP [dm3] 2L_12016575_SNP [dm6]	G	A	5.278e^-4	1	INTRON CG6734	TF binding site mE1_TFBS_cad
3L	10616407	3L_10616407_SNP [dm3] 3L_10623307_SNP [dm6]	C	T	5.294e^-4	1	NON_SYNONYMOUS_CODING CG42521
2L	19390239	2L_19390239_SNP [dm3] 2L_19390239_SNP [dm6]	A	G	5.296e^-4	1	UPSTREAM CG17549 DOWNSTREAM CG17544 INTERGENIC
3L	13460709	3L_13460709_SNP [dm3] 3L_13467609_SNP [dm6]	G	A	5.336e^-4	1	SYNONYMOUS_CODING CG10089 DOWNSTREAM CG10089	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	7992944	X_7992944_SNP [dm3] X_8098911_SNP [dm6]	A	C	5.340e^-4	1	NON_SYNONYMOUS_CODING CG2258	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	515115	3L_515115_SNP [dm3] 3L_515115_SNP [dm6]	T	A	5.346e^-4	1	INTRON klar
2L	9154039	2L_9154039_INS [dm3] 2L_9154039_INS [dm6]	A	AG	5.355e^-4	1	INTRON CG32982
2L	3438465	2L_3438465_SNP [dm3] 2L_3438465_SNP [dm6]	G	C	5.368e^-4	1	INTERGENIC
3L	21278876	3L_21278876_SNP [dm3] 3L_21285776_SNP [dm6]	T	G	5.376e^-4	1	UPSTREAM pzg & 1 other INTRON CG12974	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Kr mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx mE1_TFBS_zfh1
2R	8366414	2R_8366414_SNP [dm3] 2R_12478909_SNP [dm6]	T	C	5.421e^-4	1	INTRON Dh44-R2
2L	6413381	2L_6413381_SNP [dm3] 2L_6413381_SNP [dm6]	C	G	5.426e^-4	1	INTRON CG13982	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
X	12730718	X_12730718_SNP [dm3] X_12836685_SNP [dm6]	G	A	5.432e^-4	1	INTRON Pde9
3R	2346419	3R_2346419_SNP [dm3] 3R_6520697_SNP [dm6]	G	C	5.466e^-4	1	INTERGENIC
3L	8948611	3L_8948611_SNP [dm3] 3L_8955511_SNP [dm6]	C	T	5.473e^-4	1	SYNONYMOUS_CODING GNBP3	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	16490877	3L_16490877_SNP [dm3] 3L_16497777_SNP [dm6]	C	T	5.486e^-4	1	SYNONYMOUS_CODING st INTRON CG43373	TF binding site mE1_TFBS_cad
2L	18596706	2L_18596706_SNP [dm3] 2L_18596706_SNP [dm6]	T	C	5.490e^-4	1	SYNONYMOUS_CODING amos	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	12642110	3L_12642110_SNP [dm3] 3L_12649010_SNP [dm6]	T	G	5.514e^-4	1	DOWNSTREAM CR32111 EXON CR43431	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2R	18140925	2R_18140925_SNP [dm3] 2R_22253420_SNP [dm6]	T	C	5.519e^-4	1	INTRON dve	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
2L	10254163	2L_10254163_SNP [dm3] 2L_10254163_SNP [dm6]	A	G	5.535e^-4	1	DOWNSTREAM CG5676 INTRON Ror
2R	16793797	2R_16793797_SNP [dm3] 2R_20906292_SNP [dm6]	T	A	5.542e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_zfh1
3R	5621183	3R_5621183_DEL [dm3] 3R_9795461_DEL [dm6]	GTCTAAG	G	5.543e^-4	1	CODON_DELETION CG8516	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	12358244	2R_12358244_SNP [dm3] 2R_16470739_SNP [dm6]	C	T	5.567e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	19041839	3R_19041839_SNP [dm3] 3R_23216117_SNP [dm6]	T	C	5.574e^-4	1	INTRON cnc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_Trl
2R	10840250	2R_10840250_SNP [dm3] 2R_14952745_SNP [dm6]	G	A	5.584e^-4	1	INTRON aPKC
3L	12417345	3L_12417345_SNP [dm3] 3L_12424245_SNP [dm6]	C	G	5.599e^-4	1	INTRON toe	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	5243810	X_5243810_SNP [dm3] X_5349777_SNP [dm6]	T	C	5.624e^-4	1	INTRON SK
2R	4209516	2R_4209516_DEL [dm3] 2R_8322011_DEL [dm6]	CATAGAATTAC...	C	5.641e^-4	1	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	19454692	2L_19454692_SNP [dm3] 2L_19454692_SNP [dm6]	G	C	5.646e^-4	1	UPSTREAM CG10026 INTRON CG10026	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	7094540	3L_7094540_SNP [dm3] 3L_7101440_SNP [dm6]	A	G	5.658e^-4	1	INTRON form3
3R	2799094	3R_2799094_SNP [dm3] 3R_6973372_SNP [dm6]	C	T	5.677e^-4	1	INTRON Antp	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
X	7506833	X_7506833_SNP [dm3] X_7612800_SNP [dm6]	G	A	5.680e^-4	1	INTRON ct	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	16805026	X_16805026_SNP [dm3] X_16910993_SNP [dm6]	T	C	5.690e^-4	1	INTRON CR44754
2L	12294007	2L_12294007_SNP [dm3] 2L_12294007_SNP [dm6]	A	C	5.698e^-4	1	INTRON aret
3L	21246579	3L_21246579_SNP [dm3] 3L_21253479_SNP [dm6]	G	A	5.731e^-4	1	INTRON Eip78C
2L	12293940	2L_12293940_SNP [dm3] 2L_12293940_SNP [dm6]	A	C	5.741e^-4	1	INTRON aret
2L	8886563	2L_8886563_SNP [dm3] 2L_8886563_SNP [dm6]	C	A	5.750e^-4	1	DOWNSTREAM CR44415 INTERGENIC	TF binding site mE1_TFBS_cnc
2R	1638054	2R_1638054_SNP [dm3] 2R_5750549_SNP [dm6]	A	G	5.760e^-4	1	INTERGENIC
X	7436558	X_7436558_SNP [dm3] X_7542525_SNP [dm6]	T	A	5.772e^-4	1	INTRON CG32719	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	15146347	3L_15146347_SNP [dm3] 3L_15153247_SNP [dm6]	C	T	5.779e^-4	1	UTR_3_PRIME FucTA DOWNSTREAM Msh6
2L	12299026	2L_12299026_SNP [dm3] 2L_12299026_SNP [dm6]	T	C	5.811e^-4	1	SYNONYMOUS_CODING aret	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	11913382	2L_11913382_SNP [dm3] 2L_11913382_SNP [dm6]	A	T	5.829e^-4	1	INTRON Pde1c
3R	9881448	3R_9881448_SNP [dm3] 3R_14055726_SNP [dm6]	T	C	5.831e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	10627591	2R_10627591_SNP [dm3] 2R_14740086_SNP [dm6]	T	C	5.882e^-4	1	UTR_3_PRIME CG12858 UPSTREAM CR43428 DOWNSTREAM CG12858
3R	11626174	3R_11626174_SNP [dm3] 3R_15800452_SNP [dm6]	C	T	5.890e^-4	1	INTRON nsl1
X	4916538	X_4916538_SNP [dm3] X_5022505_SNP [dm6]	A	G	5.905e^-4	1	INTRON CR44833	regulatory region REDfly_CRMs
3R	15513812	3R_15513812_SNP [dm3] 3R_19688090_SNP [dm6]	T	C	5.933e^-4	1	INTRON Naam
2L	9495242	2L_9495242_SNP [dm3] 2L_9495242_SNP [dm6]	T	C	5.941e^-4	1	UPSTREAM CG33298 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Ubx
3L	16489438	3L_16489438_SNP [dm3] 3L_16496338_SNP [dm6]	C	T	5.983e^-4	1	UPSTREAM CG42514 INTRON CG33158 & 1 other
3R	24318736	3R_24318736_SNP [dm3] 3R_28493014_SNP [dm6]	C	A	5.990e^-4	1	SYNONYMOUS_CODING Dhc98D
X	13823776	X_13823776_SNP [dm3] X_13929743_SNP [dm6]	T	C	5.996e^-4	1	INTRON mamo
2R	7031256	2R_7031256_SNP [dm3] 2R_11143751_SNP [dm6]	A	T	6.048e^-4	1	UPSTREAM CG13229 INTRON CG13229
2L	19454657	2L_19454657_SNP [dm3] 2L_19454657_SNP [dm6]	A	G	6.077e^-4	1	UPSTREAM CG10026 INTRON CG10026	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	13823784	X_13823784_SNP [dm3] X_13929751_SNP [dm6]	T	C	6.087e^-4	1	INTRON mamo
3R	16253582	3R_16253582_SNP [dm3] 3R_20427860_SNP [dm6]	T	C	6.094e^-4	1	INTRON Gfrl
2L	8091211	2L_8091211_SNP [dm3] 2L_8091211_SNP [dm6]	C	T	6.097e^-4	1	INTRON Bsg	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi
X	8809664	X_8809664_SNP [dm3] X_8915631_SNP [dm6]	T	C	6.097e^-4	1	INTRON rdgA
2R	2640304	2R_2640304_SNP [dm3] 2R_6752799_SNP [dm6]	C	T	6.111e^-4	1	INTRON Eb1	TF binding site mE1_TFBS_sens
2R	7692161	2R_7692161_SNP [dm3] 2R_11804656_SNP [dm6]	C	A	6.122e^-4	1	INTRON ths	TF binding site mE1_TFBS_cad
2R	3650055	2R_3650055_SNP [dm3] 2R_7762550_SNP [dm6]	A	C	6.123e^-4	1	INTRON CG30497 & 1 other
2L	8421217	2L_8421217_SNP [dm3] 2L_8421217_SNP [dm6]	A	G	6.162e^-4	1	INTRON Akap200	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	8938569	2R_8938569_SNP [dm3] 2R_13051064_SNP [dm6]	G	C	6.183e^-4	1	INTERGENIC
3L	13890489	3L_13890489_SNP [dm3] 3L_13897389_SNP [dm6]	C	G	6.191e^-4	1	INTRON dysc
3L	13936559	3L_13936559_SNP [dm3] 3L_13943459_SNP [dm6]	T	C	6.194e^-4	1	INTRON CG32137
2L	7641757	2L_7641757_SNP [dm3] 2L_7641757_SNP [dm6]	A	C	6.195e^-4	1	DOWNSTREAM Slob INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_zfh1
2L	12293958	2L_12293958_SNP [dm3] 2L_12293958_SNP [dm6]	A	T	6.209e^-4	1	INTRON aret
2R	18015691	2R_18015691_SNP [dm3] 2R_22128186_SNP [dm6]	A	G	6.211e^-4	1	UPSTREAM GM130 INTRON NtR	TF binding site mE1_TFBS_cad
2R	1717764	2R_1717764_SNP [dm3] 2R_5830259_SNP [dm6]	C	T	6.229e^-4	1	INTRON dpr12
2R	10863806	2R_10863806_SNP [dm3] 2R_14976301_SNP [dm6]	A	G	6.272e^-4	1	INTRON ckn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	14061388	3R_14061388_SNP [dm3] 3R_18235666_SNP [dm6]	C	A	6.274e^-4	1	UPSTREAM repo INTERGENIC	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	13682567	2R_13682567_SNP [dm3] 2R_17795062_SNP [dm6]	C	A	6.277e^-4	1	INTRON Dhit	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
X	11521835	X_11521835_SNP [dm3] X_11627802_SNP [dm6]	A	T	6.278e^-4	1	INTRON Ptp10D
3L	514839	3L_514839_SNP [dm3] 3L_514839_SNP [dm6]	C	A	6.286e^-4	1	INTRON klar
3L	5616358	3L_5616358_SNP [dm3] 3L_5623258_SNP [dm6]	C	A	6.288e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	19182615	3R_19182615_SNP [dm3] 3R_23356893_SNP [dm6]	C	T	6.289e^-4	1	SYNONYMOUS_CODING Sec13 UPSTREAM ATPsyn-Cf6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	18932299	2R_18932299_SNP [dm3] 2R_23044776_SNP [dm6]	A	G	6.296e^-4	1	INTRON twi	regulatory region FlyBase REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	20260956	2L_20260956_SNP [dm3] 2L_20260956_SNP [dm6]	A	G	6.305e^-4	1	INTERGENIC
3L	14154636	3L_14154636_SNP [dm3] 3L_14161536_SNP [dm6]	A	G	6.321e^-4	1	INTERGENIC	regulatory region REDfly_CRMs
3R	26469552	3R_26469552_SNP [dm3] 3R_30643830_SNP [dm6]	C	T	6.322e^-4	1	UTR_3_PRIME CG31013
2L	20263213	2L_20263213_SNP [dm3] 2L_20263213_SNP [dm6]	G	C	6.341e^-4	1	DOWNSTREAM CG17570 INTERGENIC
X	11656435	X_11656435_SNP [dm3] X_11762402_SNP [dm6]	C	A	6.349e^-4	1	INTRON m
2L	9127353	2L_9127353_SNP [dm3] 2L_9127353_SNP [dm6]	G	A	6.352e^-4	1	NON_SYNONYMOUS_CODING CG32982	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad
2L	6534024	2L_6534024_DEL [dm3] 2L_6534024_DEL [dm6]	AC	A	6.364e^-4	1	INTRON eya	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
2L	6525709	2L_6525709_SNP [dm3] 2L_6525709_SNP [dm6]	G	A	6.374e^-4	1	SYNONYMOUS_CODING CG31637	TF binding site mE1_TFBS_sens
2L	11150819	2L_11150819_SNP [dm3] 2L_11150819_SNP [dm6]	T	G	6.403e^-4	1	DOWNSTREAM CG6287 INTERGENIC	TF binding site mE1_TFBS_kn
2R	13715638	2R_13715638_SNP [dm3] 2R_17828133_SNP [dm6]	G	A	6.405e^-4	1	INTRON grh
2L	8757832	2L_8757832_SNP [dm3] 2L_8757832_SNP [dm6]	G	A	6.427e^-4	1	INTERGENIC
3L	11580574	3L_11580574_SNP [dm3] 3L_11587474_SNP [dm6]	G	C	6.440e^-4	1	START_GAINED rt UTR_5_PRIME rt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	9680164	X_9680164_SNP [dm3] X_9786131_SNP [dm6]	G	A	6.478e^-4	1	INTRON CG32698	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	13966582	3R_13966582_SNP [dm3] 3R_18140860_SNP [dm6]	C	T	6.490e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	515068	3L_515068_SNP [dm3] 3L_515068_SNP [dm6]	A	T	6.506e^-4	1	INTRON klar
2L	9919799	2L_9919799_SNP [dm3] 2L_9919799_SNP [dm6]	C	T	6.511e^-4	1	SYNONYMOUS_CODING CG4598 UPSTREAM CG4594
3L	2170470	3L_2170470_SNP [dm3] 3L_2170470_SNP [dm6]	A	G	6.519e^-4	1	NON_SYNONYMOUS_CODING CG5704
3L	21275206	3L_21275206_SNP [dm3] 3L_21282106_SNP [dm6]	C	T	6.543e^-4	1	UTR_3_PRIME CG12974 UPSTREAM ppl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	16869146	3L_16869146_SNP [dm3] 3L_16876046_SNP [dm6]	A	G	6.546e^-4	1	INTRON Lmpt	TF binding site mE1_TFBS_cnc
2L	2514667	2L_2514667_SNP [dm3] 2L_2514667_SNP [dm6]	C	T	6.549e^-4	1	INTERGENIC
X	14548968	X_14548968_SNP [dm3] X_14654935_SNP [dm6]	A	G	6.563e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
X	14540075	X_14540075_SNP [dm3] X_14646042_SNP [dm6]	A	G	6.566e^-4	1	INTRON NetA	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	15271138	2L_15271138_SNP [dm3] 2L_15271138_SNP [dm6]	T	G	6.603e^-4	1	UTR_5_PRIME Cul3 UPSTREAM Cul3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	19390216	2L_19390216_SNP [dm3] 2L_19390216_SNP [dm6]	A	G	6.610e^-4	1	UPSTREAM CG17549 DOWNSTREAM CG17544 INTERGENIC
X	21503281	X_21503281_SNP [dm3] X_21632254_SNP [dm6]	A	T	6.612e^-4	1	DOWNSTREAM CR44712 INTERGENIC
X	21503282	X_21503282_SNP [dm3] X_21632255_SNP [dm6]	G	C	6.612e^-4	1	DOWNSTREAM CR44712 INTERGENIC
2L	9827706	2L_9827706_SNP [dm3] 2L_9827706_SNP [dm6]	G	C	6.620e^-4	1	INTRON nAChRalpha6
3L	9756272	3L_9756272_SNP [dm3] 3L_9763172_SNP [dm6]	G	A	6.654e^-4	1	UPSTREAM CG8177 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	17588063	2L_17588063_SNP [dm3] 2L_17588063_SNP [dm6]	A	T	6.660e^-4	1	DOWNSTREAM CR44411 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	21275828	3L_21275828_SNP [dm3] 3L_21282728_SNP [dm6]	A	G	6.660e^-4	1	INTRON CG12974
3L	515112	3L_515112_SNP [dm3] 3L_515112_SNP [dm6]	T	C	6.666e^-4	1	INTRON klar
3L	517298	3L_517298_SNP [dm3] 3L_517298_SNP [dm6]	C	T	6.666e^-4	1	INTRON klar
X	9455211	X_9455211_SNP [dm3] X_9561178_SNP [dm6]	G	A	6.693e^-4	1	SYNONYMOUS_CODING Cubn	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	11289936	2R_11289936_INS [dm3] 2R_15402431_INS [dm6]	T	TT	6.693e^-4	1	INTRON CG43729
2R	13682428	2R_13682428_SNP [dm3] 2R_17794923_SNP [dm6]	A	G	6.694e^-4	1	INTRON Dhit	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
3L	621475	3L_621475_SNP [dm3] 3L_621475_SNP [dm6]	A	G	6.723e^-4	1	INTRON CG43337	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Stat92E
2L	22424816	2L_22424816_SNP [dm3] 2L_22532084_SNP [dm6]	T	A	6.727e^-4	1	DOWNSTREAM RpL5 INTERGENIC
2L	8757282	2L_8757282_SNP [dm3] 2L_8757282_SNP [dm6]	T	A	6.752e^-4	1	INTERGENIC
X	12799498	X_12799498_SNP [dm3] X_12905465_SNP [dm6]	C	A	6.752e^-4	1	INTRON CG4404	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	10640225	2L_10640225_SNP [dm3] 2L_10640225_SNP [dm6]	G	A	6.757e^-4	1	NON_SYNONYMOUS_CODING CG31872 DOWNSTREAM CR45351
2R	11292415	2R_11292415_SNP [dm3] 2R_15404910_SNP [dm6]	G	T	6.761e^-4	1	INTRON CG43729 EXON CR45020
2L	12851007	2L_12851007_SNP [dm3] 2L_12851007_SNP [dm6]	C	T	6.773e^-4	1	INTERGENIC
3L	11222952	3L_11222952_SNP [dm3] 3L_11229852_SNP [dm6]	G	A	6.784e^-4	1	UTR_3_PRIME CG42671 DOWNSTREAM CG42671
2L	18577520	2L_18577520_SNP [dm3] 2L_18577520_SNP [dm6]	G	A	6.806e^-4	1	INTRON Pde11
3L	14506757	3L_14506757_SNP [dm3] 3L_14513657_SNP [dm6]	G	A	6.809e^-4	1	INTRON bbg	enhancer mE1_CBP_Enhancers TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
2L	7390954	2L_7390954_SNP [dm3] 2L_7390954_SNP [dm6]	C	G	6.811e^-4	1	DOWNSTREAM CG5160 & 1 other INTERGENIC
3L	1664390	3L_1664390_SNP [dm3] 3L_1664390_SNP [dm6]	G	C	6.815e^-4	1	UPSTREAM CG7974 & 1 other INTRON CG7971	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	8381078	2R_8381078_SNP [dm3] 2R_12493573_SNP [dm6]	G	T	6.862e^-4	1	INTRON fdl
2L	2326076	2L_2326076_SNP [dm3] 2L_2326076_SNP [dm6]	T	A	6.864e^-4	1	INTRON CG9967 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	2326078	2L_2326078_SNP [dm3] 2L_2326078_SNP [dm6]	A	C	6.864e^-4	1	INTRON CG9967 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	9851157	3R_9851157_SNP [dm3] 3R_14025435_SNP [dm6]	G	A	6.886e^-4	1	INTRON rdx	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	19041908	3R_19041908_SNP [dm3] 3R_23216186_SNP [dm6]	C	A	6.935e^-4	1	INTRON cnc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
2R	12863706	2R_12863706_SNP [dm3] 2R_16976201_SNP [dm6]	A	G	6.960e^-4	1	INTRON Cbp53E
X	17672539	X_17672539_SNP [dm3] X_17778506_SNP [dm6]	A	T	6.965e^-4	1	UTR_3_PRIME unc-4
2L	11205450	2L_11205450_SNP [dm3] 2L_11205450_SNP [dm6]	T	C	6.973e^-4	1	DOWNSTREAM CR43859 INTERGENIC
3R	13796905	3R_13796905_SNP [dm3] 3R_17971183_SNP [dm6]	A	C	6.973e^-4	1	INTRON cpo
2R	16560259	2R_16560259_SNP [dm3] 2R_20672754_SNP [dm6]	G	A	6.991e^-4	1	UTR_3_PRIME CG30152 DOWNSTREAM CG30152	TF binding site mE1_TFBS_sens
3R	13448186	3R_13448186_SNP [dm3] 3R_17622464_SNP [dm6]	G	C	6.996e^-4	1	UPSTREAM tRNA:CR33534 & 1 other INTERGENIC
X	4185043	X_4185043_SNP [dm3] X_4291010_SNP [dm6]	T	G	7.025e^-4	1	INTERGENIC
3L	10524897	3L_10524897_INS [dm3] 3L_10531797_INS [dm6]	T	TT	7.027e^-4	1	INTRON A2bp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	8240474	2L_8240474_SNP [dm3] 2L_8240474_SNP [dm6]	C	A	7.035e^-4	1	SYNONYMOUS_CODING Spn28F UPSTREAM Pvr	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8621212	3L_8621212_SNP [dm3] 3L_8628112_SNP [dm6]	C	T	7.067e^-4	1	INTRON Zasp66	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	11666483	3R_11666483_SNP [dm3] 3R_15840761_SNP [dm6]	G	C	7.081e^-4	1	SYNONYMOUS_CODING spn-E	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	18701280	3L_18701280_SNP [dm3] 3L_18708180_SNP [dm6]	A	T	7.085e^-4	1	INTRON CR44674 EXON CR44674
2R	7157406	2R_7157406_SNP [dm3] 2R_11269901_SNP [dm6]	T	C	7.086e^-4	1	NON_SYNONYMOUS_CODING Cpr47Ef	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	9413663	2L_9413663_SNP [dm3] 2L_9413663_SNP [dm6]	G	A	7.098e^-4	1	INTRON Shawl
3L	947641	3L_947641_INS [dm3] 3L_947641_INS [dm6]	A	AGTAGACGATGAAGCATATA...	7.121e^-4	1	INTRON Glut1
2L	8204208	2L_8204208_SNP [dm3] 2L_8204208_SNP [dm6]	T	A	7.124e^-4	1	INTRON CR44119 & 1 other	TF binding site mE1_TFBS_HSA
3L	10432354	3L_10432354_SNP [dm3] 3L_10439254_SNP [dm6]	G	T	7.134e^-4	1	INTERGENIC
X	10923219	X_10923219_SNP [dm3] X_11029186_SNP [dm6]	C	G	7.147e^-4	1	INTRON CG42339
3L	4909693	3L_4909693_SNP [dm3] 3L_4909693_SNP [dm6]	C	A	7.155e^-4	1	UPSTREAM Rh50 INTERGENIC
X	20586569	X_20586569_SNP [dm3] X_20715542_SNP [dm6]	G	C	7.186e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	19128670	2L_19128670_SNP [dm3] 2L_19128670_SNP [dm6]	C	T	7.196e^-4	1	SYNONYMOUS_CODING l_2_37Cd DOWNSTREAM Aats-asn	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	8367662	2R_8367662_SNP [dm3] 2R_12480157_SNP [dm6]	C	G	7.221e^-4	1	INTRON Dh44-R2
2R	1594630	2R_1594630_SNP [dm3] 2R_5707125_SNP [dm6]	A	C	7.230e^-4	1	UTR_3_PRIME ap DOWNSTREAM ap
3L	13157493	3L_13157493_SNP [dm3] 3L_13164393_SNP [dm6]	A	C	7.236e^-4	1	INTERGENIC
3L	17722399	3L_17722399_SNP [dm3] 3L_17729299_SNP [dm6]	T	C	7.248e^-4	1	UPSTREAM CG6052 INTRON Ccn	TF binding site mE1_TFBS_HSA
X	12730710	X_12730710_SNP [dm3] X_12836677_SNP [dm6]	A	G	7.255e^-4	1	INTRON Pde9
2L	12288934	2L_12288934_INS [dm3] 2L_12288934_INS [dm6]	G	GCTGCGG	7.281e^-4	1	UTR_5_PRIME aret INTRON aret	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2R	13414690	2R_13414690_SNP [dm3] 2R_17527185_SNP [dm6]	A	G	7.287e^-4	1	INTRON Patronin
2L	7715808	2L_7715808_SNP [dm3] 2L_7715808_SNP [dm6]	T	A	7.292e^-4	1	SPLICE_SITE_REGION CG33296 INTRON CG33296	TF binding site mE1_TFBS_inv
2L	6539113	2L_6539113_SNP [dm3] 2L_6539113_SNP [dm6]	A	C	7.300e^-4	1	INTRON eya
X	14600606	X_14600606_SNP [dm3] X_14706573_SNP [dm6]	T	C	7.302e^-4	1	INTRON NetB
2R	4226080	2R_4226080_INS [dm3] 2R_8338575_INS [dm6]	A	TGAT	7.326e^-4	1	INTRON pdm3
X	16104561	X_16104561_SNP [dm3] X_16210528_SNP [dm6]	T	C	7.366e^-4	1	DOWNSTREAM disco INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8757138	2L_8757138_SNP [dm3] 2L_8757138_SNP [dm6]	C	T	7.378e^-4	1	INTERGENIC
3R	12252872	3R_12252872_SNP [dm3] 3R_16427150_SNP [dm6]	C	T	7.406e^-4	1	INTERGENIC	regulatory region REDfly_CRMs
3R	5408417	3R_5408417_SNP [dm3] 3R_9582695_SNP [dm6]	T	A	7.407e^-4	1	INTRON CG8301 & 1 other
2R	16060138	2R_16060138_SNP [dm3] 2R_20172633_SNP [dm6]	G	T	7.413e^-4	1	INTERGENIC
3L	11581133	3L_11581133_SNP [dm3] 3L_11588033_SNP [dm6]	G	A	7.420e^-4	1	UPSTREAM rt INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_Trl
2L	22430329	2L_22430329_SNP [dm3] 2L_22537597_SNP [dm6]	T	G	7.469e^-4	1	UPSTREAM RpL5 & 1 other INTERGENIC	TF binding site mE1_TFBS_Ubx
2L	4796222	2L_4796222_SNP [dm3] 2L_4796222_SNP [dm6]	G	T	7.472e^-4	1	SPLICE_SITE_REGION CG3294 DOWNSTREAM Clect27 INTRON CG3294
2L	3155393	2L_3155393_SNP [dm3] 2L_3155393_SNP [dm6]	T	G	7.491e^-4	1	INTRON Mad	TF binding site mE1_TFBS_cad
2L	20260959	2L_20260959_SNP [dm3] 2L_20260959_SNP [dm6]	A	T	7.505e^-4	1	INTERGENIC
3L	13393523	3L_13393523_SNP [dm3] 3L_13400423_SNP [dm6]	T	C	7.525e^-4	1	SYNONYMOUS_CODING sens	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	14831431	3R_14831431_SNP [dm3] 3R_19005709_SNP [dm6]	G	A	7.534e^-4	1	INTRON gukh	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	22420926	2L_22420926_SNP [dm3] 2L_22528194_SNP [dm6]	C	A	7.541e^-4	1	INTERGENIC
X	16244017	X_16244017_SNP [dm3] X_16349984_SNP [dm6]	T	C	7.544e^-4	1	UPSTREAM sl INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_Ubx
3L	5955736	3L_5955736_SNP [dm3] 3L_5962636_SNP [dm6]	T	A	7.559e^-4	1	INTERGENIC
2R	16793880	2R_16793880_DEL [dm3] 2R_20906375_DEL [dm6]	ATTAACAAATA...	A	7.576e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_zfh1
2L	15047728	2L_15047728_SNP [dm3] 2L_15047728_SNP [dm6]	T	C	7.578e^-4	1	SYNONYMOUS_CODING ck	TF binding site mE1_TFBS_cad
X	14548780	X_14548780_SNP [dm3] X_14654747_SNP [dm6]	T	A	7.580e^-4	1	UPSTREAM NetA INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	9352318	3R_9352318_SNP [dm3] 3R_13526596_SNP [dm6]	T	C	7.616e^-4	1	INTERGENIC
X	19190590	X_19190590_SNP [dm3] X_19296557_SNP [dm6]	G	T	7.618e^-4	1	INTRON CG8034	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
3R	8597376	3R_8597376_SNP [dm3] 3R_12771654_SNP [dm6]	C	G	7.629e^-4	1	INTRON beat-Vc
3R	18302538	3R_18302538_SNP [dm3] 3R_22476816_SNP [dm6]	A	G	7.631e^-4	1	INTRON Nrx-1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	2514666	2L_2514666_SNP [dm3] 2L_2514666_SNP [dm6]	C	T	7.634e^-4	1	INTERGENIC
2L	19390248	2L_19390248_SNP [dm3] 2L_19390248_SNP [dm6]	C	G	7.641e^-4	1	UPSTREAM CG17549 DOWNSTREAM CG17544 INTERGENIC
2R	5046573	2R_5046573_SNP [dm3] 2R_9159068_SNP [dm6]	G	C	7.642e^-4	1	INTRON CG8008
3L	9555013	3L_9555013_SNP [dm3] 3L_9561913_SNP [dm6]	T	C	7.652e^-4	1	INTRON CG42673
2L	7613319	2L_7613319_SNP [dm3] 2L_7613319_SNP [dm6]	G	T	7.662e^-4	1	INTRON CG6739
3L	2427018	3L_2427018_SNP [dm3] 3L_2427018_SNP [dm6]	G	T	7.672e^-4	1	INTRON CG45186	TF binding site mE1_TFBS_Trl
3L	11109215	3L_11109215_SNP [dm3] 3L_11116115_SNP [dm6]	T	A	7.681e^-4	1	INTRON fd68A
3L	11811975	3L_11811975_SNP [dm3] 3L_11818875_SNP [dm6]	T	A	7.688e^-4	1	SYNONYMOUS_CODING CG5946
X	10902988	X_10902988_SNP [dm3] X_11008955_SNP [dm6]	C	A	7.701e^-4	1	INTRON CG42339
2R	14902395	2R_14902395_SNP [dm3] 2R_19014890_SNP [dm6]	A	G	7.723e^-4	1	INTERGENIC
2R	16532731	2R_16532731_SNP [dm3] 2R_20645226_SNP [dm6]	A	C	7.725e^-4	1	SYNONYMOUS_CODING DMAP1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	8804474	3L_8804474_SNP [dm3] 3L_8811374_SNP [dm6]	G	T	7.737e^-4	1	DOWNSTREAM CG13309 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	10952185	3L_10952185_SNP [dm3] 3L_10959085_SNP [dm6]	A	T	7.738e^-4	1	UPSTREAM CR45248 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	22430551	2L_22430551_SNP [dm3] 2L_22537819_SNP [dm6]	C	T	7.742e^-4	1	UTR_5_PRIME CG17490 UPSTREAM RpL5 & 1 other	TF binding site mE1_TFBS_Ubx
2R	8651527	2R_8651527_SNP [dm3] 2R_12764022_SNP [dm6]	C	G	7.743e^-4	1	DOWNSTREAM CG12374 INTERGENIC
3L	14499535	3L_14499535_SNP [dm3] 3L_14506435_SNP [dm6]	T	C	7.758e^-4	1	INTRON bbg
3R	10230565	3R_10230565_SNP [dm3] 3R_14404843_SNP [dm6]	A	G	7.764e^-4	1	INTRON cv-c	TF binding site mE1_TFBS_inv
3R	19182973	3R_19182973_SNP [dm3] 3R_23357251_SNP [dm6]	T	C	7.767e^-4	1	INTRON Sec13	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	2439989	3L_2439989_SNP [dm3] 3L_2439989_SNP [dm6]	T	C	7.785e^-4	1	INTRON CG45186	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
X	8809655	X_8809655_SNP [dm3] X_8915622_SNP [dm6]	C	T	7.789e^-4	1	INTRON rdgA
2R	4226045	2R_4226045_SNP [dm3] 2R_8338540_SNP [dm6]	C	T	7.800e^-4	1	INTRON pdm3
2R	4226047	2R_4226047_SNP [dm3] 2R_8338542_SNP [dm6]	A	T	7.800e^-4	1	INTRON pdm3
2L	3796912	2L_3796912_SNP [dm3] 2L_3796912_SNP [dm6]	T	C	7.800e^-4	1	INTRON CG3921
2L	6536991	2L_6536991_SNP [dm3] 2L_6536991_SNP [dm6]	G	T	7.825e^-4	1	UPSTREAM eya INTRON eya	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
X	21961994	X_21961994_INS [dm3] X_22560158_INS [dm6]	T	TTCTGCTTGGCACGCGCCAA...	7.839e^-4	1	INTERGENIC	transposable element FlyBase
3L	21275495	3L_21275495_SNP [dm3] 3L_21282395_SNP [dm6]	T	C	7.871e^-4	1	SYNONYMOUS_CODING CG12974 UPSTREAM ppl
X	21500281	X_21500281_SNP [dm3] X_21629254_SNP [dm6]	G	C	7.873e^-4	1	START_GAINED DIP1 UTR_5_PRIME DIP1 INTRON DIP1	TF binding site BDTNP1_TFBS_dl
X	21502215	X_21502215_SNP [dm3] X_21631188_SNP [dm6]	G	A	7.873e^-4	1	EXON CR44712	TF binding site BDTNP1_TFBS_dl
3L	16948599	3L_16948599_SNP [dm3] 3L_16955499_SNP [dm6]	T	C	7.909e^-4	1	UTR_5_PRIME Nc73EF UPSTREAM Nc73EF	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	17866856	3R_17866856_SNP [dm3] 3R_22041134_SNP [dm6]	A	T	7.913e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_Trl
X	18896182	X_18896182_SNP [dm3] X_19002149_SNP [dm6]	T	A	7.917e^-4	1	INTRON CG43759
2R	8380988	2R_8380988_SNP [dm3] 2R_12493483_SNP [dm6]	T	A	7.919e^-4	1	INTRON fdl
2L	8050350	2L_8050350_SNP [dm3] 2L_8050350_SNP [dm6]	A	G	7.962e^-4	1	SYNONYMOUS_CODING CG7466	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	16911076	2L_16911076_SNP [dm3] 2L_16911076_SNP [dm6]	T	G	7.973e^-4	1	SYNONYMOUS_CODING tweek UPSTREAM ApepP	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	2225342	3L_2225342_SNP [dm3] 3L_2225342_SNP [dm6]	G	A	8.026e^-4	1	INTERGENIC
2L	19454792	2L_19454792_DEL [dm3] 2L_19454792_DEL [dm6]	TTTTT	T	8.027e^-4	1	UTR_5_PRIME CG10026 UPSTREAM CG10026	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	13964609	3R_13964609_MNP [dm3] 3R_18138887_MNP [dm6]	ATTC	CCAT	8.031e^-4	1	INTERGENIC
2R	18135014	2R_18135014_DEL [dm3] 2R_22247509_DEL [dm6]	GG	G	8.054e^-4	1	INTRON dve	regulatory region REDfly_CRMs
2R	17761565	2R_17761565_SNP [dm3] 2R_21874060_SNP [dm6]	G	C	8.055e^-4	1	INTRON Fili	TF binding site BDTNP1_TFBS_da mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2L	3882165	2L_3882165_SNP [dm3] 2L_3882165_SNP [dm6]	G	C	8.064e^-4	1	INTRON capu
3L	615408	3L_615408_DEL [dm3] 3L_615408_DEL [dm6]	GTTG	G	8.069e^-4	1	DOWNSTREAM CR42719 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_disco mE1_TFBS_HSA
2R	8366274	2R_8366274_SNP [dm3] 2R_12478769_SNP [dm6]	C	A	8.080e^-4	1	INTRON Dh44-R2
2R	4270913	2R_4270913_SNP [dm3] 2R_8383408_SNP [dm6]	T	G	8.086e^-4	1	INTRON pdm3	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	9821904	3L_9821904_SNP [dm3] 3L_9828804_SNP [dm6]	G	A	8.087e^-4	1	UPSTREAM CG43897 INTRON CG43897
3R	5840855	3R_5840855_SNP [dm3] 3R_10015133_SNP [dm6]	A	T	8.097e^-4	1	INTRON Mical
2L	14187596	2L_14187596_SNP [dm3] 2L_14187596_SNP [dm6]	G	A	8.114e^-4	1	INTRON Dyrk2
2L	16880188	2L_16880188_SNP [dm3] 2L_16880188_SNP [dm6]	T	A	8.118e^-4	1	UPSTREAM CG32832 INTRON CG31743 & 1 other
3L	21293569	3L_21293569_SNP [dm3] 3L_21300469_SNP [dm6]	G	T	8.126e^-4	1	UPSTREAM Cpr78Cc INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	11400510	3L_11400510_DEL [dm3] 3L_11407410_DEL [dm6]	TT	T	8.132e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	19446377	2L_19446377_SNP [dm3] 2L_19446377_SNP [dm6]	C	G	8.134e^-4	1	NON_SYNONYMOUS_CODING RanGAP DOWNSTREAM Top2	TF binding site mE1_TFBS_sens
3R	13396628	3R_13396628_INS [dm3] 3R_17570906_INS [dm6]	T	TT	8.144e^-4	1	INTERGENIC
3R	9568280	3R_9568280_DEL [dm3] 3R_13742558_DEL [dm6]	GGCAAAG	G	8.156e^-4	1	INTRON CG34383
3R	8720664	3R_8720664_DEL [dm3] 3R_12894942_DEL [dm6]	TGCAGTGCTTCTCATC...	T	8.168e^-4	1	UPSTREAM CR33929 INTERGENIC
2R	15566985	2R_15566985_SNP [dm3] 2R_19679480_SNP [dm6]	T	C	8.180e^-4	1	INTERGENIC
2R	16808503	2R_16808503_SNP [dm3] 2R_20920998_SNP [dm6]	A	T	8.181e^-4	1	INTRON Rx	TF binding site mE1_TFBS_cnc
2L	1782683	2L_1782683_SNP [dm3] 2L_1782683_SNP [dm6]	G	T	8.185e^-4	1	INTERGENIC	regulatory region REDfly_CRMs
2L	1782704	2L_1782704_SNP [dm3] 2L_1782704_SNP [dm6]	G	A	8.185e^-4	1	INTERGENIC	regulatory region REDfly_CRMs
3L	3934958	3L_3934958_SNP [dm3] 3L_3934958_SNP [dm6]	G	A	8.186e^-4	1	INTRON Eip63F-1 EXON Eip63F-2
3L	11408542	3L_11408542_SNP [dm3] 3L_11415442_SNP [dm6]	G	A	8.196e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	6752027	2R_6752027_SNP [dm3] 2R_10864522_SNP [dm6]	C	G	8.203e^-4	1	INTRON CG30015
3L	15791200	3L_15791200_SNP [dm3] 3L_15798100_SNP [dm6]	C	T	8.206e^-4	1	INTERGENIC
2R	7692131	2R_7692131_SNP [dm3] 2R_11804626_SNP [dm6]	G	A	8.208e^-4	1	INTRON ths	TF binding site mE1_TFBS_cad
3R	10618528	3R_10618528_DEL [dm3] 3R_14792806_DEL [dm6]	AA	A	8.213e^-4	1	UTR_3_PRIME jvl INTRON jvl
2L	3017136	2L_3017136_SNP [dm3] 2L_3017136_SNP [dm6]	T	A	8.221e^-4	1	INTRON CG17224	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	13460712	3L_13460712_SNP [dm3] 3L_13467612_SNP [dm6]	A	C	8.223e^-4	1	SYNONYMOUS_CODING CG10089 DOWNSTREAM CG10089	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	5955750	3L_5955750_SNP [dm3] 3L_5962650_SNP [dm6]	T	A	8.231e^-4	1	INTERGENIC
2R	7690936	2R_7690936_SNP [dm3] 2R_11803431_SNP [dm6]	G	T	8.239e^-4	1	INTRON ths	TF binding site mE1_TFBS_cad
2L	9920167	2L_9920167_SNP [dm3] 2L_9920167_SNP [dm6]	G	T	8.250e^-4	1	UTR_5_PRIME CG4594 DOWNSTREAM CG4598
2L	17588007	2L_17588007_SNP [dm3] 2L_17588007_SNP [dm6]	A	T	8.275e^-4	1	DOWNSTREAM CR44411 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	2345222	3L_2345222_SNP [dm3] 3L_2345222_SNP [dm6]	T	A	8.276e^-4	1	UTR_3_PRIME MsR1
2L	9883601	2L_9883601_SNP [dm3] 2L_9883601_SNP [dm6]	T	G	8.288e^-4	1	INTRON nAChRalpha6
3L	14350049	3L_14350049_SNP [dm3] 3L_14356949_SNP [dm6]	T	A	8.301e^-4	1	INTRON fz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
2R	16528450	2R_16528450_SNP [dm3] 2R_20640945_SNP [dm6]	T	A	8.313e^-4	1	UPSTREAM maf-S & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Ubx
3L	5119937	3L_5119937_SNP [dm3] 3L_5126837_SNP [dm6]	T	A	8.318e^-4	1	INTERGENIC	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3R	24388636	3R_24388636_INS [dm3] 3R_28562914_INS [dm6]	A	AATATA	8.326e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	24388713	3R_24388713_SNP [dm3] 3R_28562991_SNP [dm6]	T	C	8.326e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	21501809	X_21501809_SNP [dm3] X_21630782_SNP [dm6]	A	T	8.334e^-4	1	UPSTREAM CR44712 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_Ubx
3L	13395011	3L_13395011_SNP [dm3] 3L_13401911_SNP [dm6]	T	A	8.337e^-4	1	UPSTREAM sens INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl
3L	13549812	3L_13549812_SNP [dm3] 3L_13556712_SNP [dm6]	A	T	8.355e^-4	1	INTRON bru-3
3L	5091504	3L_5091504_SNP [dm3] 3L_5091504_SNP [dm6]	T	A	8.373e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	23960303	3R_23960303_SNP [dm3] 3R_28134581_SNP [dm6]	C	T	8.382e^-4	1	INTERGENIC
3L	11629702	3L_11629702_SNP [dm3] 3L_11636602_SNP [dm6]	A	T	8.404e^-4	1	INTRON CG32091
3L	10415570	3L_10415570_SNP [dm3] 3L_10422470_SNP [dm6]	G	A	8.428e^-4	1	INTERGENIC
2L	8512447	2L_8512447_SNP [dm3] 2L_8512447_SNP [dm6]	A	G	8.430e^-4	1	UTR_3_PRIME CG13097 UPSTREAM CG13096	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	8406879	X_8406879_SNP [dm3] X_8512846_SNP [dm6]	T	A	8.456e^-4	1	INTRON CG33181
3R	13964606	3R_13964606_SNP [dm3] 3R_18138884_SNP [dm6]	A	T	8.461e^-4	1	INTERGENIC
3R	13964615	3R_13964615_DEL [dm3] 3R_18138893_DEL [dm6]	TAGCAG	T	8.461e^-4	1	INTERGENIC
2L	11420017	2L_11420017_SNP [dm3] 2L_11420017_SNP [dm6]	T	G	8.485e^-4	1	INTERGENIC	TF binding site mE1_TFBS_sens
2L	9845842	2L_9845842_SNP [dm3] 2L_9845842_SNP [dm6]	G	A	8.491e^-4	1	INTRON nAChRalpha6
2L	9883484	2L_9883484_SNP [dm3] 2L_9883484_SNP [dm6]	T	G	8.504e^-4	1	INTRON nAChRalpha6
2R	16528354	2R_16528354_SNP [dm3] 2R_20640849_SNP [dm6]	T	A	8.535e^-4	1	UPSTREAM maf-S & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Ubx
3R	13946745	3R_13946745_INS [dm3] 3R_18121023_INS [dm6]	T	TCCAAGTTGATTGAGGAT...	8.546e^-4	1	INTRON sr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	8406880	X_8406880_SNP [dm3] X_8512847_SNP [dm6]	G	A	8.546e^-4	1	INTRON CG33181
3L	12222163	3L_12222163_SNP [dm3] 3L_12229063_SNP [dm6]	T	A	8.568e^-4	1	INTRON app
2L	8512506	2L_8512506_SNP [dm3] 2L_8512506_SNP [dm6]	G	A	8.600e^-4	1	UTR_3_PRIME CG13097 UPSTREAM CG13096	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	8512507	2L_8512507_SNP [dm3] 2L_8512507_SNP [dm6]	T	G	8.600e^-4	1	UTR_3_PRIME CG13097 UPSTREAM CG13096	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	8122309	X_8122309_DEL [dm3] X_8228276_DEL [dm6]	AAC	G	8.607e^-4	1	INTRON sdt	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2R	8379024	2R_8379024_DEL [dm3] 2R_12491519_DEL [dm6]	AA	A	8.612e^-4	1	UPSTREAM fdl INTRON fdl
X	16339265	X_16339265_SNP [dm3] X_16445232_SNP [dm6]	G	A	8.624e^-4	1	UTR_3_PRIME rngo & 1 other DOWNSTREAM eIF-2alpha & 1 other
2R	14370829	2R_14370829_SNP [dm3] 2R_18483324_SNP [dm6]	C	T	8.647e^-4	1	INTRON CG30116
3L	17722675	3L_17722675_SNP [dm3] 3L_17729575_SNP [dm6]	T	A	8.652e^-4	1	UPSTREAM CG6052 INTRON Ccn
2R	13214223	2R_13214223_SNP [dm3] 2R_17326718_SNP [dm6]	A	C	8.654e^-4	1	INTRON mbl
2R	16808504	2R_16808504_SNP [dm3] 2R_20920999_SNP [dm6]	T	C	8.692e^-4	1	INTRON Rx	TF binding site mE1_TFBS_cnc
2R	17408216	2R_17408216_DEL [dm3] 2R_21520711_DEL [dm6]	GTATGACCTGTAG...	G	8.697e^-4	1	CODON_DELETION CG30289 UPSTREAM CG30288
3L	3934566	3L_3934566_SNP [dm3] 3L_3934566_SNP [dm6]	T	A	8.724e^-4	1	UPSTREAM Eip63F-1 & 1 other INTRON Eip63F-1
X	10736698	X_10736698_SNP [dm3] X_10842665_SNP [dm6]	C	A	8.724e^-4	1	SYNONYMOUS_CODING CG15209 DOWNSTREAM CG32669 INTRON sbr
3L	8612942	3L_8612942_SNP [dm3] 3L_8619842_SNP [dm6]	C	A	8.734e^-4	1	UPSTREAM S-Lap2 DOWNSTREAM S-Lap1 INTERGENIC
2L	1787752	2L_1787752_SNP [dm3] 2L_1787752_SNP [dm6]	G	T	8.760e^-4	1	INTERGENIC
2R	4226092	2R_4226092_SNP [dm3] 2R_8338587_SNP [dm6]	A	T	8.780e^-4	1	INTRON pdm3
2L	3468609	2L_3468609_SNP [dm3] 2L_3468609_SNP [dm6]	G	T	8.799e^-4	1	SYNONYMOUS_CODING CG3238	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	15548857	X_15548857_SNP [dm3] X_15654824_SNP [dm6]	T	C	8.811e^-4	1	INTERGENIC
2R	1993100	2R_1993100_SNP [dm3] 2R_6105595_SNP [dm6]	G	C	8.823e^-4	1	INTRON EcR	TF binding site BDTNP1_TFBS_twi
2R	19065037	2R_19065037_SNP [dm3] 2R_23177514_SNP [dm6]	G	A	8.826e^-4	1	INTRON CG34371
2R	19066301	2R_19066301_SNP [dm3] 2R_23178778_SNP [dm6]	A	G	8.826e^-4	1	INTRON CG34371	TF binding site BDTNP1_TFBS_twi
3L	17941360	3L_17941360_SNP [dm3] 3L_17948260_SNP [dm6]	G	C	8.833e^-4	1	UPSTREAM CR45393 INTERGENIC
3R	22558496	3R_22558496_DEL [dm3] 3R_26732774_DEL [dm6]	AAATACCGCAGCAAA...	A	8.839e^-4	1	INTERGENIC
2R	4226054	2R_4226054_SNP [dm3] 2R_8338549_SNP [dm6]	A	C	8.852e^-4	1	INTRON pdm3
2R	9730596	2R_9730596_SNP [dm3] 2R_13843091_SNP [dm6]	A	T	8.858e^-4	1	UTR_3_PRIME Syngr
2R	12771386	2R_12771386_SNP [dm3] 2R_16883881_SNP [dm6]	G	A	8.868e^-4	1	INTRON CG8910 & 1 other
X	8642078	X_8642078_SNP [dm3] X_8748045_SNP [dm6]	C	G	8.894e^-4	1	INTERGENIC
3L	8729915	3L_8729915_SNP [dm3] 3L_8736815_SNP [dm6]	A	G	8.897e^-4	1	UTR_3_PRIME Prm INTRON Prm	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	6782405	2L_6782405_SNP [dm3] 2L_6782405_SNP [dm6]	C	A	8.920e^-4	1	INTRON nrv1
2L	19823150	2L_19823150_SNP [dm3] 2L_19823150_SNP [dm6]	T	G	8.927e^-4	1	INTRON sick	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	6509259	3R_6509259_SNP [dm3] 3R_10683537_SNP [dm6]	A	C	8.938e^-4	1	INTRON CR44230
2R	13682724	2R_13682724_SNP [dm3] 2R_17795219_SNP [dm6]	C	T	8.939e^-4	1	SYNONYMOUS_CODING Dhit	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2R	13872437	2R_13872437_SNP [dm3] 2R_17984932_SNP [dm6]	T	C	8.942e^-4	1	INTRON dpr13
2R	16016094	2R_16016094_SNP [dm3] 2R_20128589_SNP [dm6]	T	G	8.942e^-4	1	INTERGENIC	TF binding site mE1_TFBS_cad
3L	13458312	3L_13458312_SNP [dm3] 3L_13465212_SNP [dm6]	C	G	8.952e^-4	1	SYNONYMOUS_CODING CG10738 DOWNSTREAM CG10089
2L	10707731	2L_10707731_SNP [dm3] 2L_10707731_SNP [dm6]	G	A	8.953e^-4	1	INTRON Lip2
3L	18641710	3L_18641710_SNP [dm3] 3L_18648610_SNP [dm6]	A	C	8.957e^-4	1	INTRON MYPT-75D	TF binding site BDTNP1_TFBS_twi
2L	8757165	2L_8757165_SNP [dm3] 2L_8757165_SNP [dm6]	G	T	8.972e^-4	1	INTERGENIC
2L	8757166	2L_8757166_SNP [dm3] 2L_8757166_SNP [dm6]	A	C	8.972e^-4	1	INTERGENIC
2L	8757167	2L_8757167_INS [dm3] 2L_8757167_INS [dm6]	A	ACC	8.972e^-4	1	INTERGENIC
2L	7638165	2L_7638165_SNP [dm3] 2L_7638165_SNP [dm6]	T	G	8.981e^-4	1	DOWNSTREAM CR44800 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	2378293	2L_2378293_SNP [dm3] 2L_2378293_SNP [dm6]	G	A	8.991e^-4	1	INTRON Atxn7	TF binding site mE1_TFBS_chinmo
X	13195958	X_13195958_SNP [dm3] X_13301925_SNP [dm6]	A	T	8.996e^-4	1	INTRON CG1764
3R	10888295	3R_10888295_SNP [dm3] 3R_15062573_SNP [dm6]	T	C	8.998e^-4	1	INTRON dpr9
2L	12850997	2L_12850997_SNP [dm3] 2L_12850997_SNP [dm6]	G	T	9.001e^-4	1	INTERGENIC
2L	5682188	2L_5682188_SNP [dm3] 2L_5682188_SNP [dm6]	C	G	9.005e^-4	1	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	14345941	2L_14345941_SNP [dm3] 2L_14345941_SNP [dm6]	G	A	9.010e^-4	1	SYNONYMOUS_CODING Send2 DOWNSTREAM CG33090
X	4111512	X_4111512_SNP [dm3] X_4217479_SNP [dm6]	C	A	9.042e^-4	1	UPSTREAM CG15570 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	11396897	3L_11396897_SNP [dm3] 3L_11403797_SNP [dm6]	G	A	9.051e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	15019288	2L_15019288_INS [dm3] 2L_15019288_INS [dm6]	A	ACAATAACAACA...	9.065e^-4	1	INTRON GABA-B-R1
3L	17722243	3L_17722243_SNP [dm3] 3L_17729143_SNP [dm6]	T	A	9.065e^-4	1	SYNONYMOUS_CODING CG6052 INTRON Ccn	TF binding site mE1_TFBS_HSA
3L	4367298	3L_4367298_SNP [dm3] 3L_4367298_SNP [dm6]	A	T	9.083e^-4	1	SYNONYMOUS_CODING CG11342 DOWNSTREAM DopEcR & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	11390313	3L_11390313_SNP [dm3] 3L_11397213_SNP [dm6]	C	A	9.087e^-4	1	UPSTREAM CG44362 INTERGENIC
X	12799598	X_12799598_SNP [dm3] X_12905565_SNP [dm6]	G	A	9.104e^-4	1	INTRON CG4404	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	22424826	2L_22424826_DEL [dm3] 2L_22532094_DEL [dm6]	GT	C	9.105e^-4	1	DOWNSTREAM RpL5 INTERGENIC
3L	10741595	3L_10741595_SNP [dm3] 3L_10748495_SNP [dm6]	C	T	9.109e^-4	1	INTERGENIC
2R	4448556	2R_4448556_SNP [dm3] 2R_8561051_SNP [dm6]	G	T	9.111e^-4	1	INTERGENIC
3L	16164831	3L_16164831_SNP [dm3] 3L_16171731_SNP [dm6]	T	G	9.113e^-4	1	UPSTREAM CG33795 INTERGENIC
3R	24388612	3R_24388612_SNP [dm3] 3R_28562890_SNP [dm6]	G	A	9.114e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	6477572	3L_6477572_SNP [dm3] 3L_6484472_SNP [dm6]	G	A	9.121e^-4	1	SYNONYMOUS_CODING CG42747	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	7660260	2R_7660260_SNP [dm3] 2R_11772755_SNP [dm6]	A	T	9.135e^-4	1	INTRON ths
3L	14499513	3L_14499513_SNP [dm3] 3L_14506413_SNP [dm6]	G	T	9.143e^-4	1	INTRON bbg
3L	8841509	3L_8841509_SNP [dm3] 3L_8848409_SNP [dm6]	C	A	9.152e^-4	1	INTRON dally	TF binding site mE1_TFBS_HSA
3L	8841526	3L_8841526_SNP [dm3] 3L_8848426_SNP [dm6]	A	T	9.152e^-4	1	INTRON dally	TF binding site mE1_TFBS_HSA
2L	10740857	2L_10740857_SNP [dm3] 2L_10740857_SNP [dm6]	T	A	9.155e^-4	1	UTR_3_PRIME CG6729 DOWNSTREAM CG12299	TF binding site mE1_TFBS_cad
2L	21712281	2L_21712281_SNP [dm3] 2L_21712281_SNP [dm6]	T	A	9.160e^-4	1	INTRON CG31619
3R	16999895	3R_16999895_SNP [dm3] 3R_21174173_SNP [dm6]	G	A	9.181e^-4	1	NON_SYNONYMOUS_CODING SNF4Agamma INTRON SNF4Agamma	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	15110575	X_15110575_SNP [dm3] X_15216542_SNP [dm6]	T	C	9.189e^-4	1	INTERGENIC
3L	17215774	3L_17215774_SNP [dm3] 3L_17222674_SNP [dm6]	A	T	9.192e^-4	1	INTRON Rbp6
3R	730987	3R_730987_SNP [dm3] 3R_4905265_SNP [dm6]	C	T	9.194e^-4	1	INTERGENIC
3L	10432700	3L_10432700_SNP [dm3] 3L_10439600_SNP [dm6]	C	T	9.196e^-4	1	INTERGENIC
3L	7331833	3L_7331833_SNP [dm3] 3L_7338733_SNP [dm6]	T	C	9.201e^-4	1	SYNONYMOUS_CODING eco UPSTREAM lark	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	10538236	3L_10538236_SNP [dm3] 3L_10545136_SNP [dm6]	C	T	9.207e^-4	1	INTRON A2bp1
X	7443000	X_7443000_SNP [dm3] X_7548967_SNP [dm6]	C	T	9.221e^-4	1	UPSTREAM CG32719 INTERGENIC	TF binding site BDTNP1_TFBS_hb
3L	16691056	3L_16691056_SNP [dm3] 3L_16697956_SNP [dm6]	G	A	9.233e^-4	1	DOWNSTREAM CR45179 INTRON Lasp & 1 other
2R	12509765	2R_12509765_SNP [dm3] 2R_16622260_SNP [dm6]	T	G	9.245e^-4	1	INTRON CG5065	TF binding site mE1_TFBS_cad
2L	11145607	2L_11145607_SNP [dm3] 2L_11145607_SNP [dm6]	A	T	9.261e^-4	1	UPSTREAM CG31867 INTRON Gyc32E
2L	15272682	2L_15272682_SNP [dm3] 2L_15272682_SNP [dm6]	A	G	9.289e^-4	1	UPSTREAM Cul3 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	9736538	3L_9736538_SNP [dm3] 3L_9743438_SNP [dm6]	C	A	9.298e^-4	1	INTRON CG42268 & 1 other
2L	7591796	2L_7591796_SNP [dm3] 2L_7591796_SNP [dm6]	C	T	9.300e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	3726702	2L_3726702_SNP [dm3] 2L_3726702_SNP [dm6]	C	T	9.309e^-4	1	SYNONYMOUS_CODING Shaw UTR_3_PRIME Shaw
2L	13438414	2L_13438414_SNP [dm3] 2L_13438414_SNP [dm6]	G	A	9.317e^-4	1	NON_SYNONYMOUS_CODING Tehao INTRON CG42784 EXON CR45683	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	14868429	2L_14868429_SNP [dm3] 2L_14868429_SNP [dm6]	A	T	9.327e^-4	1	INTERGENIC
2L	11150848	2L_11150848_SNP [dm3] 2L_11150848_SNP [dm6]	C	T	9.327e^-4	1	DOWNSTREAM CG6287 INTERGENIC	TF binding site mE1_TFBS_kn
X	5325619	X_5325619_SNP [dm3] X_5431586_SNP [dm6]	G	C	9.331e^-4	1	NON_SYNONYMOUS_CODING CG15784	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
X	13164522	X_13164522_INS [dm3] X_13270489_INS [dm6]	G	GCTGCTG	9.332e^-4	1	CODON_INSERTION HDAC4
3L	11363484	3L_11363484_SNP [dm3] 3L_11370384_SNP [dm6]	A	T	9.336e^-4	1	INTERGENIC
2L	14675940	2L_14675940_SNP [dm3] 2L_14675940_SNP [dm6]	G	T	9.341e^-4	1	INTRON osp
3R	15406722	3R_15406722_SNP [dm3] 3R_19581000_SNP [dm6]	A	T	9.346e^-4	1	INTRON Dys
3R	4572780	3R_4572780_SNP [dm3] 3R_8747058_SNP [dm6]	A	G	9.350e^-4	1	UPSTREAM CG8223 INTRON CG9801	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	20287555	2L_20287555_SNP [dm3] 2L_20287555_SNP [dm6]	C	G	9.365e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	21290777	3L_21290777_SNP [dm3] 3L_21297677_SNP [dm6]	C	T	9.368e^-4	1	UPSTREAM CG43702 DOWNSTREAM Cpr78Cb INTRON Edg78E	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo
3L	15496187	3L_15496187_SNP [dm3] 3L_15503087_SNP [dm6]	C	T	9.372e^-4	1	SYNONYMOUS_CODING CG7272 DOWNSTREAM CG7857
2L	9514458	2L_9514458_SNP [dm3] 2L_9514458_SNP [dm6]	G	T	9.402e^-4	1	INTRON CG33298
X	8122291	X_8122291_SNP [dm3] X_8228258_SNP [dm6]	A	G	9.406e^-4	1	INTRON sdt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2R	12796609	2R_12796609_SNP [dm3] 2R_16909104_SNP [dm6]	T	C	9.415e^-4	1	INTERGENIC
2R	19162825	2R_19162825_SNP [dm3] 2R_23275302_SNP [dm6]	C	T	9.426e^-4	1	UTR_5_PRIME ord
3L	9563131	3L_9563131_SNP [dm3] 3L_9570031_SNP [dm6]	G	T	9.426e^-4	1	INTRON CG42673
3L	10065550	3L_10065550_SNP [dm3] 3L_10072450_SNP [dm6]	G	A	9.439e^-4	1	DOWNSTREAM dpr6 INTRON dpr6
3L	9736523	3L_9736523_DEL [dm3] 3L_9743423_DEL [dm6]	AGG	A	9.442e^-4	1	INTRON CG42268 & 1 other
3L	9736527	3L_9736527_SNP [dm3] 3L_9743427_SNP [dm6]	G	A	9.442e^-4	1	INTRON CG42268 & 1 other
3L	9736529	3L_9736529_SNP [dm3] 3L_9743429_SNP [dm6]	C	T	9.442e^-4	1	INTRON CG42268 & 1 other
3L	9736536	3L_9736536_INS [dm3] 3L_9743436_INS [dm6]	G	TA	9.442e^-4	1	INTRON CG42268 & 1 other
3L	9582465	3L_9582465_SNP [dm3] 3L_9589365_SNP [dm6]	A	T	9.447e^-4	1	INTRON CG42673
3R	16955177	3R_16955177_SNP [dm3] 3R_21129455_SNP [dm6]	A	C	9.471e^-4	1	SYNONYMOUS_CODING Obp93a UTR_3_PRIME CG5793 UPSTREAM Ice2 DOWNSTREAM CG5793
2R	15924835	2R_15924835_SNP [dm3] 2R_20037330_SNP [dm6]	A	C	9.474e^-4	1	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	9582427	3L_9582427_SNP [dm3] 3L_9589327_SNP [dm6]	T	G	9.511e^-4	1	INTRON CG42673
2L	15892403	2L_15892403_SNP [dm3] 2L_15892403_SNP [dm6]	G	A	9.527e^-4	1	NON_SYNONYMOUS_CODING Tep1
2L	15040163	2L_15040163_DEL [dm3] 2L_15040163_DEL [dm6]	AACAACAACA	A	9.553e^-4	1	CODON_DELETION Su_H_	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
3L	11196873	3L_11196873_SNP [dm3] 3L_11203773_SNP [dm6]	T	C	9.560e^-4	1	INTRON Plod
3L	12593129	3L_12593129_SNP [dm3] 3L_12600029_SNP [dm6]	T	A	9.561e^-4	1	INTERGENIC
2R	16794074	2R_16794074_DEL [dm3] 2R_20906569_DEL [dm6]	TTAAA	T	9.574e^-4	1	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_zfh1
3L	3741129	3L_3741129_SNP [dm3] 3L_3741129_SNP [dm6]	C	T	9.581e^-4	1	INTRON CG32264
2L	7398702	2L_7398702_SNP [dm3] 2L_7398702_SNP [dm6]	C	T	9.604e^-4	1	UTR_5_PRIME CG5160 UPSTREAM CR44079
2R	9730603	2R_9730603_SNP [dm3] 2R_13843098_SNP [dm6]	T	G	9.611e^-4	1	UTR_3_PRIME Syngr
X	22259301	X_22259301_SNP [dm3] X_22857465_SNP [dm6]	T	C	9.614e^-4	1	INTRON CG42346	TF binding site BDTNP1_TFBS_dl mE1_TFBS_kn
3L	7582057	3L_7582057_SNP [dm3] 3L_7588957_SNP [dm6]	C	T	9.615e^-4	1	SYNONYMOUS_CODING CG7716
3L	13577874	3L_13577874_SNP [dm3] 3L_13584774_SNP [dm6]	G	C	9.632e^-4	1	INTRON bru-3
X	12900174	X_12900174_SNP [dm3] X_13006141_SNP [dm6]	T	C	9.654e^-4	1	INTRON rad
2R	17461276	2R_17461276_SNP [dm3] 2R_21573771_SNP [dm6]	C	T	9.655e^-4	1	INTRON CG10440
3L	12642106	3L_12642106_SNP [dm3] 3L_12649006_SNP [dm6]	T	C	9.670e^-4	1	DOWNSTREAM CR32111 EXON CR43431	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2L	6419691	2L_6419691_SNP [dm3] 2L_6419691_SNP [dm6]	C	T	9.726e^-4	1	SYNONYMOUS_CODING Tig	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	12792532	3L_12792532_SNP [dm3] 3L_12799432_SNP [dm6]	C	T	9.756e^-4	1	INTRON Atg1
X	7426689	X_7426689_SNP [dm3] X_7532656_SNP [dm6]	A	G	9.757e^-4	1	INTRON CG32719
2R	8372456	2R_8372456_SNP [dm3] 2R_12484951_SNP [dm6]	C	T	9.766e^-4	1	INTRON Dh44-R2
2R	13324125	2R_13324125_DEL [dm3] 2R_17436620_DEL [dm6]	CGT	C	9.766e^-4	1	INTRON EDTP	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	22424372	2L_22424372_SNP [dm3] 2L_22531640_SNP [dm6]	T	A	9.767e^-4	1	DOWNSTREAM RpL5 INTERGENIC
2R	14444066	2R_14444066_INS [dm3] 2R_18556561_INS [dm6]	T	TGT	9.770e^-4	1	INTRON GEFmeso
3R	19726865	3R_19726865_SNP [dm3] 3R_23901143_SNP [dm6]	C	T	9.810e^-4	1	INTRON sba
2L	8177083	2L_8177083_SNP [dm3] 2L_8177083_SNP [dm6]	C	T	9.821e^-4	1	INTRON Piezo
2R	13882570	2R_13882570_SNP [dm3] 2R_17995065_SNP [dm6]	C	A	9.826e^-4	1	INTRON dpr13
2L	6563173	2L_6563173_SNP [dm3] 2L_6563173_SNP [dm6]	G	C	9.831e^-4	1	SYNONYMOUS_CODING Ent2 UPSTREAM CG9596 DOWNSTREAM CG13766	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	8485412	2L_8485412_SNP [dm3] 2L_8485412_SNP [dm6]	A	C	9.853e^-4	1	SYNONYMOUS_CODING d UPSTREAM unsRNA:d-a	TF binding site mE1_TFBS_chinmo
3L	5225670	3L_5225670_SNP [dm3] 3L_5232570_SNP [dm6]	A	G	9.860e^-4	1	INTRON shep
3L	7506865	3L_7506865_INS [dm3] 3L_7513765_INS [dm6]	A	AA	9.862e^-4	1	INTRON CG7546	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	9903717	3L_9903717_SNP [dm3] 3L_9910617_SNP [dm6]	C	T	9.863e^-4	1	INTRON CG34356
3L	9903719	3L_9903719_SNP [dm3] 3L_9910619_SNP [dm6]	T	C	9.863e^-4	1	INTRON CG34356
3L	9773617	3L_9773617_SNP [dm3] 3L_9780517_SNP [dm6]	G	C	9.866e^-4	1	INTRON CG8177
3L	11053675	3L_11053675_SNP [dm3] 3L_11060575_SNP [dm6]	A	T	9.887e^-4	1	NON_SYNONYMOUS_CODING CG6321 UPSTREAM Blos2 DOWNSTREAM CG7888
2L	16582486	2L_16582486_SNP [dm3] 2L_16582486_SNP [dm6]	T	A	9.893e^-4	1	INTRON CG42389	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
3L	14844879	3L_14844879_SNP [dm3] 3L_14851779_SNP [dm6]	G	A	9.905e^-4	1	INTRON CG17839
X	18408656	X_18408656_SNP [dm3] X_18514623_SNP [dm6]	A	C	9.916e^-4	1	SYNONYMOUS_CODING CG6470 UPSTREAM Aats-his & 1 other
2L	2860357	2L_2860357_SNP [dm3] 2L_2860357_SNP [dm6]	C	G	9.928e^-4	1	INTRON CG2991	TF binding site mE1_TFBS_inv
3L	17588927	3L_17588927_SNP [dm3] 3L_17595827_SNP [dm6]	A	G	9.938e^-4	1	INTRON Eip74EF
2R	7692144	2R_7692144_SNP [dm3] 2R_11804639_SNP [dm6]	A	T	9.946e^-4	1	INTRON ths	TF binding site mE1_TFBS_cad
2L	16368429	2L_16368429_SNP [dm3] 2L_16368429_SNP [dm6]	G	T	9.949e^-4	1	INTERGENIC
3R	16817595	3R_16817595_SNP [dm3] 3R_20991873_SNP [dm6]	C	T	9.973e^-4	1	INTRON Calx	TF binding site mE1_TFBS_chinmo
3L	5101734	3L_5101734_SNP [dm3] 3L_5101734_SNP [dm6]	C	T	9.977e^-4	1	INTERGENIC

By genomic position
Variant impact
Gene name

se_Glucose phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results