DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=5.739e^-6)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2917 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

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Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	19623528	3R_19623528_SNP [dm3] 3R_23797806_SNP [dm6]	A	G	5.491e^-8	0.062	SYNONYMOUS_CODING mbc	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	19623540	3R_19623540_SNP [dm3] 3R_23797818_SNP [dm6]	T	C	9.802e^-8	0.062	SYNONYMOUS_CODING mbc	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	19623567	3R_19623567_SNP [dm3] 3R_23797845_SNP [dm6]	C	T	9.993e^-8	0.062	SYNONYMOUS_CODING mbc	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	19614616	3R_19614616_SNP [dm3] 3R_23788894_SNP [dm6]	A	G	1.851e^-7	0.087	INTRON mbc
3R	18326855	3R_18326855_SNP [dm3] 3R_22501133_SNP [dm6]	C	T	8.145e^-7	0.305	INTRON Octbeta1R	regulatory region REDfly_CRMs
3R	19119304	3R_19119304_SNP [dm3] 3R_23293582_SNP [dm6]	A	G	1.956e^-6	0.432	INTRON pnt	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	19813563	3R_19813563_SNP [dm3] 3R_23987841_SNP [dm6]	T	C	1.969e^-6	0.432	SYNONYMOUS_CODING CG5902 DOWNSTREAM CG13604	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3R	19813677	3R_19813677_SNP [dm3] 3R_23987955_SNP [dm6]	G	A	2.172e^-6	0.432	SYNONYMOUS_CODING CG5902 DOWNSTREAM CG13604	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	25802827	3R_25802827_SNP [dm3] 3R_29977105_SNP [dm6]	G	A	2.409e^-6	0.432	INTERGENIC
3R	26811121	3R_26811121_SNP [dm3] 3R_30985399_SNP [dm6]	C	T	2.477e^-6	0.432	INTRON 5-HT7
3R	19119299	3R_19119299_DEL [dm3] 3R_23293577_DEL [dm6]	TG	T	2.988e^-6	0.432	INTRON pnt	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	19119311	3R_19119311_SNP [dm3] 3R_23293589_SNP [dm6]	A	G	2.988e^-6	0.432	INTRON pnt	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	19884482	3R_19884482_SNP [dm3] 3R_24058760_SNP [dm6]	G	T	3.112e^-6	0.432	SYNONYMOUS_CODING SMC1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
3R	25802858	3R_25802858_SNP [dm3] 3R_29977136_SNP [dm6]	T	G	3.254e^-6	0.432	INTERGENIC
3R	26658588	3R_26658588_SNP [dm3] 3R_30832866_SNP [dm6]	C	T	3.485e^-6	0.432	INTRON CG15544
3R	25802860	3R_25802860_SNP [dm3] 3R_29977138_SNP [dm6]	G	A	3.748e^-6	0.432	INTERGENIC
3R	26580470	3R_26580470_SNP [dm3] 3R_30754748_SNP [dm6]	A	T	4.442e^-6	0.432	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3R	18914854	3R_18914854_SNP [dm3] 3R_23089132_SNP [dm6]	A	T	4.787e^-6	0.432	INTRON CG13830
3R	20761418	3R_20761418_SNP [dm3] 3R_24935696_SNP [dm6]	G	A	4.855e^-6	0.432	SYNONYMOUS_CODING Osbp DOWNSTREAM CG11771	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	19884571	3R_19884571_SNP [dm3] 3R_24058849_SNP [dm6]	A	C	5.095e^-6	0.432	SPLICE_SITE_REGION SMC1 INTRON SMC1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
3R	18396413	3R_18396413_SNP [dm3] 3R_22570691_SNP [dm6]	G	A	5.236e^-6	0.432	INTRON CG33110
3R	22441304	3R_22441304_DEL [dm3] 3R_26615582_DEL [dm6]	CC	C	5.435e^-6	0.432	INTERGENIC
2R	11751600	2R_11751600_SNP [dm3] 2R_15864095_SNP [dm6]	G	C	5.673e^-6	0.432	DOWNSTREAM Rif1 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	24027117	3R_24027117_SNP [dm3] 3R_28201395_SNP [dm6]	T	G	5.812e^-6	0.432	INTRON CG34354
2L	3844629	2L_3844629_SNP [dm3] 2L_3844629_SNP [dm6]	G	T	5.974e^-6	0.432	DOWNSTREAM CR44983 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
3R	22441521	3R_22441521_SNP [dm3] 3R_26615799_SNP [dm6]	A	C	6.291e^-6	0.432	INTERGENIC
3R	19883967	3R_19883967_SNP [dm3] 3R_24058245_SNP [dm6]	T	A	6.717e^-6	0.432	UPSTREAM SMC1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3R	19884743	3R_19884743_SNP [dm3] 3R_24059021_SNP [dm6]	A	G	6.837e^-6	0.432	INTRON SMC1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3R	19884763	3R_19884763_SNP [dm3] 3R_24059041_SNP [dm6]	G	A	6.837e^-6	0.432	INTRON SMC1	TF binding site mE1_TFBS_HSA
2L	19368739	2L_19368739_INS [dm3] 2L_19368739_INS [dm6]	T	TATGT	8.104e^-6	0.432	INTERGENIC
3R	19884814	3R_19884814_SNP [dm3] 3R_24059092_SNP [dm6]	A	C	8.183e^-6	0.432	SYNONYMOUS_CODING SMC1	TF binding site mE1_TFBS_HSA
2L	14432015	2L_14432015_SNP [dm3] 2L_14432015_SNP [dm6]	G	A	8.491e^-6	0.432	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
3R	26725543	3R_26725543_INS [dm3] 3R_30899821_INS [dm6]	T	TT	8.568e^-6	0.432	DOWNSTREAM CG33483 INTRON Cyp4c3
2L	14431990	2L_14431990_SNP [dm3] 2L_14431990_SNP [dm6]	C	G	8.726e^-6	0.432	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
2L	14431979	2L_14431979_DEL [dm3] 2L_14431979_DEL [dm6]	GG	A	8.750e^-6	0.432	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
3R	17549728	3R_17549728_SNP [dm3] 3R_21724006_SNP [dm6]	A	G	8.931e^-6	0.432	DOWNSTREAM CR44096 INTERGENIC
3R	18405650	3R_18405650_SNP [dm3] 3R_22579928_SNP [dm6]	A	G	8.975e^-6	0.432	UTR_3_PRIME CG33110 UPSTREAM CSN6	TF binding site mE1_TFBS_inv
3R	27069434	3R_27069434_DEL [dm3] 3R_31243712_DEL [dm6]	TCATCAGCATCAT...	T	9.162e^-6	0.432	INTRON qless
3R	19119293	3R_19119293_SNP [dm3] 3R_23293571_SNP [dm6]	G	A	9.402e^-6	0.432	INTRON pnt	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	18914850	3R_18914850_SNP [dm3] 3R_23089128_SNP [dm6]	A	G	9.407e^-6	0.432	INTRON CG13830
3R	20798882	3R_20798882_SNP [dm3] 3R_24973160_SNP [dm6]	G	A	9.459e^-6	0.432	INTERGENIC
3R	26129371	3R_26129371_SNP [dm3] 3R_30303649_SNP [dm6]	G	T	1.022e^-5	0.447	INTRON hdc
2L	14431966	2L_14431966_SNP [dm3] 2L_14431966_SNP [dm6]	A	G	1.027e^-5	0.447	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	18994484	3R_18994484_SNP [dm3] 3R_23168762_SNP [dm6]	G	A	1.104e^-5	0.449	UTR_5_PRIME Irk1 INTRON Irk1
3R	25951192	3R_25951192_SNP [dm3] 3R_30125470_SNP [dm6]	A	G	1.120e^-5	0.449	UPSTREAM CG45073 DOWNSTREAM Ppi1 INTERGENIC	TF binding site mE1_TFBS_inv
3R	17557203	3R_17557203_SNP [dm3] 3R_21731481_SNP [dm6]	C	T	1.128e^-5	0.449	INTERGENIC
3R	13905919	3R_13905919_SNP [dm3] 3R_18080197_SNP [dm6]	T	C	1.141e^-5	0.449	UPSTREAM CG14317 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	24262548	3R_24262548_SNP [dm3] 3R_28436826_SNP [dm6]	G	A	1.164e^-5	0.449	INTRON beat-VI
2L	14432023	2L_14432023_SNP [dm3] 2L_14432023_SNP [dm6]	T	A	1.178e^-5	0.449	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
3R	26658628	3R_26658628_SNP [dm3] 3R_30832906_SNP [dm6]	C	A	1.201e^-5	0.449	INTRON CG15544
2R	11751578	2R_11751578_SNP [dm3] 2R_15864073_SNP [dm6]	A	T	1.222e^-5	0.449	DOWNSTREAM Rif1 INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	21939039	X_21939039_SNP [dm3] X_22537203_SNP [dm6]	T	C	1.437e^-5	0.492	DOWNSTREAM S6kII INTRON CG17600 & 1 other	TF binding site mE1_TFBS_cad
3R	26825101	3R_26825101_SNP [dm3] 3R_30999379_SNP [dm6]	G	T	1.481e^-5	0.492	INTRON 5-HT7
3R	20848857	3R_20848857_SNP [dm3] 3R_25023135_SNP [dm6]	A	T	1.481e^-5	0.492	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
3R	19884065	3R_19884065_INS [dm3] 3R_24058343_INS [dm6]	A	AA	1.495e^-5	0.492	UTR_5_PRIME SMC1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
2L	11496275	2L_11496275_SNP [dm3] 2L_11496275_SNP [dm6]	T	C	1.507e^-5	0.492	DOWNSTREAM CG6488 INTERGENIC
2L	14431988	2L_14431988_SNP [dm3] 2L_14431988_SNP [dm6]	C	T	1.508e^-5	0.492	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
3R	26129375	3R_26129375_SNP [dm3] 3R_30303653_SNP [dm6]	A	T	1.523e^-5	0.492	INTRON hdc
3R	2805495	3R_2805495_SNP [dm3] 3R_6979773_SNP [dm6]	A	T	1.579e^-5	0.501	INTRON Antp	TF binding site BDTNP1_TFBS_dl
2L	9921222	2L_9921222_SNP [dm3] 2L_9921222_SNP [dm6]	G	A	1.621e^-5	0.501	SYNONYMOUS_CODING CG4594 UPSTREAM CG4592
3R	25807439	3R_25807439_SNP [dm3] 3R_29981717_SNP [dm6]	T	A	1.631e^-5	0.501	INTERGENIC
3R	25951159	3R_25951159_SNP [dm3] 3R_30125437_SNP [dm6]	G	A	1.659e^-5	0.501	UPSTREAM CG45073 DOWNSTREAM Ppi1 INTERGENIC	TF binding site mE1_TFBS_inv
3R	20848864	3R_20848864_SNP [dm3] 3R_25023142_SNP [dm6]	T	C	1.769e^-5	0.503	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
3R	26657429	3R_26657429_SNP [dm3] 3R_30831707_SNP [dm6]	A	T	1.775e^-5	0.503	INTRON CG15544
X	14736675	X_14736675_INS [dm3] X_14842642_INS [dm6]	T	TT	1.844e^-5	0.503	UTR_3_PRIME CG12539 INTRON Flo2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	18262084	3R_18262084_SNP [dm3] 3R_22436362_SNP [dm6]	A	G	1.879e^-5	0.503	UPSTREAM CG13847 INTERGENIC
3R	26301707	3R_26301707_INS [dm3] 3R_30475985_INS [dm6]	C	CGC	1.889e^-5	0.503	UPSTREAM spdo INTRON PH4alphaEFB	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
3R	21314945	3R_21314945_SNP [dm3] 3R_25489223_SNP [dm6]	G	T	1.892e^-5	0.503	INTRON Dhap-at
2L	2724565	2L_2724565_SNP [dm3] 2L_2724565_SNP [dm6]	G	T	1.904e^-5	0.503	INTERGENIC	TF binding site mE1_TFBS_bab1
3R	20848825	3R_20848825_DEL [dm3] 3R_25023103_DEL [dm6]	GATAAAATAAAGGTTAGG...	G	1.974e^-5	0.503	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
3R	20848849	3R_20848849_DEL [dm3] 3R_25023127_DEL [dm6]	ATTAAAG	GCGT	1.974e^-5	0.503	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
3R	20848865	3R_20848865_SNP [dm3] 3R_25023143_SNP [dm6]	G	C	1.974e^-5	0.503	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
3R	24957797	3R_24957797_SNP [dm3] 3R_29132075_SNP [dm6]	G	T	1.974e^-5	0.503	INTRON Vha100-1
3R	21250015	3R_21250015_SNP [dm3] 3R_25424293_SNP [dm6]	C	A	1.994e^-5	0.503	INTRON Fur1
3R	13906095	3R_13906095_SNP [dm3] 3R_18080373_SNP [dm6]	T	C	2.012e^-5	0.503	UPSTREAM CG14317 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25951166	3R_25951166_SNP [dm3] 3R_30125444_SNP [dm6]	G	A	2.069e^-5	0.509	UPSTREAM CG45073 DOWNSTREAM Ppi1 INTERGENIC	TF binding site mE1_TFBS_inv
3R	17553147	3R_17553147_SNP [dm3] 3R_21727425_SNP [dm6]	A	T	2.090e^-5	0.509	INTERGENIC
2L	4313876	2L_4313876_SNP [dm3] 2L_4313876_SNP [dm6]	A	G	2.146e^-5	0.512	INTRON tutl
3R	26812324	3R_26812324_SNP [dm3] 3R_30986602_SNP [dm6]	C	T	2.177e^-5	0.512	INTRON 5-HT7
3R	25951748	3R_25951748_SNP [dm3] 3R_30126026_SNP [dm6]	G	T	2.207e^-5	0.512	SYNONYMOUS_CODING Ppi1	TF binding site mE1_TFBS_chinmo
3R	17657043	3R_17657043_SNP [dm3] 3R_21831321_SNP [dm6]	C	A	2.220e^-5	0.512	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	20848882	3R_20848882_SNP [dm3] 3R_25023160_SNP [dm6]	A	C	2.257e^-5	0.512	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
2R	15434971	2R_15434971_SNP [dm3] 2R_19547466_SNP [dm6]	C	T	2.322e^-5	0.512	UPSTREAM sm INTRON sm
3R	20848822	3R_20848822_SNP [dm3] 3R_25023100_SNP [dm6]	T	C	2.325e^-5	0.512	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
3R	20848824	3R_20848824_SNP [dm3] 3R_25023102_SNP [dm6]	T	A	2.325e^-5	0.512	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
3R	24988530	3R_24988530_SNP [dm3] 3R_29162808_SNP [dm6]	C	A	2.416e^-5	0.523	SYNONYMOUS_CODING CG11897
3R	19199842	3R_19199842_SNP [dm3] 3R_23374120_SNP [dm6]	A	G	2.436e^-5	0.523	UTR_3_PRIME CG42828 DOWNSTREAM CG42827
3R	25312248	3R_25312248_SNP [dm3] 3R_29486526_SNP [dm6]	C	A	2.464e^-5	0.523	UTR_3_PRIME Ptp99A DOWNSTREAM CG2321 INTRON CG2321
3R	26580589	3R_26580589_SNP [dm3] 3R_30754867_SNP [dm6]	G	A	2.487e^-5	0.523	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2R	11119340	2R_11119340_SNP [dm3] 2R_15231835_SNP [dm6]	C	A	2.523e^-5	0.525	INTRON Fs EXON CR44370	TF binding site mE1_TFBS_cad mE1_TFBS_inv
3R	12099938	3R_12099938_SNP [dm3] 3R_16274216_SNP [dm6]	C	T	2.582e^-5	0.526	UTR_5_PRIME gish INTRON gish	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3R	23157209	3R_23157209_SNP [dm3] 3R_27331487_SNP [dm6]	T	A	2.596e^-5	0.526	UPSTREAM CG3330 INTERGENIC
3R	25951790	3R_25951790_SNP [dm3] 3R_30126068_SNP [dm6]	A	T	2.616e^-5	0.526	NON_SYNONYMOUS_CODING Ppi1	TF binding site mE1_TFBS_chinmo
3R	11847305	3R_11847305_SNP [dm3] 3R_16021583_SNP [dm6]	C	T	2.642e^-5	0.526	INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Stat92E
3R	14283901	3R_14283901_DEL [dm3] 3R_18458179_DEL [dm6]	GTTAT	G	2.680e^-5	0.526	INTRON fru
3R	20848817	3R_20848817_SNP [dm3] 3R_25023095_SNP [dm6]	A	C	2.695e^-5	0.526	UPSTREAM beta4GalT7 DOWNSTREAM tnc INTERGENIC
X	19041649	X_19041649_SNP [dm3] X_19147616_SNP [dm6]	C	A	2.723e^-5	0.526	INTRON RhoGAP18B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	14736740	X_14736740_DEL [dm3] X_14842707_DEL [dm6]	TTT	T	2.858e^-5	0.546	UTR_3_PRIME CG12539 INTRON Flo2	TF binding site mE1_TFBS_HSA
X	19041623	X_19041623_DEL [dm3] X_19147590_DEL [dm6]	CTTATT	C	2.903e^-5	0.547	INTRON RhoGAP18B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	17553132	3R_17553132_SNP [dm3] 3R_21727410_SNP [dm6]	G	A	2.937e^-5	0.547	INTERGENIC

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By genomic position
Variant impact
Gene name

se_Protein phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results