DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=1.470e^-8)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_3R_P	0.01639

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_3R_P	7.9519	0.0188

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2885 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2L	5581237	2L_5581237_SNP [dm3] 2L_5581237_SNP [dm6]	T	A	1.806e^-9	0.003	UPSTREAM CG14011 INTERGENIC
2R	10621372	2R_10621372_SNP [dm3] 2R_14733867_SNP [dm6]	C	A	1.906e^-8	0.018	INTERGENIC
3R	12897470	3R_12897470_SNP [dm3] 3R_17071748_SNP [dm6]	G	A	2.318e^-7	0.109	SYNONYMOUS_CODING Ns1 UPSTREAM mRpS11	TF binding site mE1_TFBS_HSA
2R	10549501	2R_10549501_SNP [dm3] 2R_14661996_SNP [dm6]	T	G	2.711e^-7	0.109	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10549497	2R_10549497_SNP [dm3] 2R_14661992_SNP [dm6]	T	G	2.903e^-7	0.109	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10608749	2R_10608749_SNP [dm3] 2R_14721244_SNP [dm6]	C	G	4.076e^-7	0.127	INTERGENIC	TF binding site mE1_TFBS_inv
2L	5577797	2L_5577797_INS [dm3] 2L_5577797_INS [dm6]	A	AATAAGA	8.274e^-7	0.193	INTERGENIC
2L	5578146	2L_5578146_SNP [dm3] 2L_5578146_SNP [dm6]	A	T	8.880e^-7	0.193	INTERGENIC
2R	10608747	2R_10608747_SNP [dm3] 2R_14721242_SNP [dm6]	C	T	9.791e^-7	0.193	INTERGENIC	TF binding site mE1_TFBS_inv
2L	5577807	2L_5577807_SNP [dm3] 2L_5577807_SNP [dm6]	A	T	1.027e^-6	0.193	INTERGENIC
2L	710235	2L_710235_SNP [dm3] 2L_710235_SNP [dm6]	G	A	1.350e^-6	0.23	UPSTREAM CR44988 INTRON ds
2R	10749489	2R_10749489_SNP [dm3] 2R_14861984_SNP [dm6]	C	T	2.022e^-6	0.23	NON_SYNONYMOUS_CODING Inr-a	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	4845584	2L_4845584_SNP [dm3] 2L_4845584_SNP [dm6]	C	T	2.065e^-6	0.23	INTRON mxt	TF binding site mE1_TFBS_chinmo
2L	4845570	2L_4845570_SNP [dm3] 2L_4845570_SNP [dm6]	A	G	2.111e^-6	0.23	SYNONYMOUS_CODING mxt	TF binding site mE1_TFBS_chinmo
2R	10701426	2R_10701426_SNP [dm3] 2R_14813921_SNP [dm6]	G	A	2.486e^-6	0.23	INTERGENIC	TF binding site mE1_TFBS_Trl
2R	10294461	2R_10294461_SNP [dm3] 2R_14406956_SNP [dm6]	T	A	2.600e^-6	0.23	INTERGENIC
2L	4845602	2L_4845602_SNP [dm3] 2L_4845602_SNP [dm6]	C	A	2.735e^-6	0.23	INTRON mxt	TF binding site mE1_TFBS_chinmo
2R	12370631	2R_12370631_SNP [dm3] 2R_16483126_SNP [dm6]	G	A	2.846e^-6	0.23	INTERGENIC
2R	10589127	2R_10589127_INS [dm3] 2R_14701622_INS [dm6]	T	TT	2.923e^-6	0.23	INTRON mspo
2R	15894085	2R_15894085_SNP [dm3] 2R_20006580_SNP [dm6]	G	T	2.925e^-6	0.23	UPSTREAM CR44628 INTERGENIC
2L	7971545	2L_7971545_SNP [dm3] 2L_7971545_SNP [dm6]	G	T	2.978e^-6	0.23	INTRON Snoo
3L	10594197	3L_10594197_INS [dm3] 3L_10601097_INS [dm6]	A	AT	3.440e^-6	0.23	INTERGENIC
2R	15894108	2R_15894108_SNP [dm3] 2R_20006603_SNP [dm6]	T	C	3.487e^-6	0.23	UPSTREAM CR44628 INTERGENIC
3L	15653853	3L_15653853_SNP [dm3] 3L_15660753_SNP [dm6]	T	C	3.520e^-6	0.23	UPSTREAM Eig71Ek DOWNSTREAM Eig71Ei INTRON Eig71Ej
3L	12438191	3L_12438191_DEL [dm3] 3L_12445091_DEL [dm6]	AG	A	3.818e^-6	0.23	INTERGENIC
2L	4845583	2L_4845583_SNP [dm3] 2L_4845583_SNP [dm6]	G	A	3.859e^-6	0.23	SPLICE_SITE_REGION mxt INTRON mxt	TF binding site mE1_TFBS_chinmo
2R	10713301	2R_10713301_SNP [dm3] 2R_14825796_SNP [dm6]	T	G	4.018e^-6	0.23	INTERGENIC
3L	12438343	3L_12438343_SNP [dm3] 3L_12445243_SNP [dm6]	T	C	4.088e^-6	0.23	INTERGENIC
2L	16401064	2L_16401064_SNP [dm3] 2L_16401064_SNP [dm6]	A	G	4.261e^-6	0.23	INTRON CG5888
2R	10715639	2R_10715639_SNP [dm3] 2R_14828134_SNP [dm6]	A	T	4.278e^-6	0.23	INTERGENIC
3L	12438336	3L_12438336_SNP [dm3] 3L_12445236_SNP [dm6]	A	T	4.450e^-6	0.23	INTERGENIC
2L	710246	2L_710246_SNP [dm3] 2L_710246_SNP [dm6]	G	T	4.466e^-6	0.23	UPSTREAM CR44988 INTRON ds
2L	710247	2L_710247_SNP [dm3] 2L_710247_SNP [dm6]	T	C	4.466e^-6	0.23	UPSTREAM CR44988 INTRON ds
3L	12438344	3L_12438344_DEL [dm3] 3L_12445244_DEL [dm6]	GAT	G	4.469e^-6	0.23	INTERGENIC
2R	10705677	2R_10705677_SNP [dm3] 2R_14818172_SNP [dm6]	G	T	4.484e^-6	0.23	NON_SYNONYMOUS_CODING CG10202	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
2R	10719564	2R_10719564_SNP [dm3] 2R_14832059_SNP [dm6]	G	A	4.484e^-6	0.23	UPSTREAM CG10205 INTERGENIC
2R	10721948	2R_10721948_SNP [dm3] 2R_14834443_SNP [dm6]	C	A	4.538e^-6	0.23	DOWNSTREAM CG10205 INTERGENIC
3R	11617750	3R_11617750_SNP [dm3] 3R_15792028_SNP [dm6]	G	A	4.718e^-6	0.233	NON_SYNONYMOUS_CODING c_3_G UPSTREAM Acyp2	TF binding site BDTNP1_TFBS_dl
2L	4845609	2L_4845609_SNP [dm3] 2L_4845609_SNP [dm6]	C	T	5.033e^-6	0.239	INTRON mxt	TF binding site mE1_TFBS_chinmo
2L	5579325	2L_5579325_SNP [dm3] 2L_5579325_SNP [dm6]	C	T	5.303e^-6	0.239	DOWNSTREAM CG14011 INTERGENIC
2L	5579341	2L_5579341_SNP [dm3] 2L_5579341_SNP [dm6]	G	A	5.303e^-6	0.239	DOWNSTREAM CG14011 INTERGENIC
2R	10371682	2R_10371682_SNP [dm3] 2R_14484177_SNP [dm6]	G	T	5.408e^-6	0.239	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	10700525	2R_10700525_SNP [dm3] 2R_14813020_SNP [dm6]	G	A	5.487e^-6	0.239	INTERGENIC	regulatory region REDfly_CRMs
3L	1871663	3L_1871663_DEL [dm3] 3L_1871663_DEL [dm6]	GG	G	5.600e^-6	0.239	UTR_3_PRIME dre4 DOWNSTREAM CG13924	TF binding site mE1_TFBS_cad
3L	12438307	3L_12438307_SNP [dm3] 3L_12445207_SNP [dm6]	A	G	5.956e^-6	0.239	INTERGENIC
2R	15894081	2R_15894081_SNP [dm3] 2R_20006576_SNP [dm6]	G	A	6.177e^-6	0.239	UPSTREAM CR44628 INTERGENIC
2R	15894055	2R_15894055_SNP [dm3] 2R_20006550_SNP [dm6]	T	C	6.299e^-6	0.239	UPSTREAM CR44628 INTERGENIC
2L	9296955	2L_9296955_SNP [dm3] 2L_9296955_SNP [dm6]	C	T	6.310e^-6	0.239	UTR_3_PRIME Ggamma30A
2L	710244	2L_710244_SNP [dm3] 2L_710244_SNP [dm6]	C	T	6.341e^-6	0.239	UPSTREAM CR44988 INTRON ds
2R	10814920	2R_10814920_SNP [dm3] 2R_14927415_SNP [dm6]	G	C	6.372e^-6	0.239	INTRON CG10249	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
2R	10702960	2R_10702960_SNP [dm3] 2R_14815455_SNP [dm6]	A	C	6.725e^-6	0.244	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	17256788	3L_17256788_SNP [dm3] 3L_17263688_SNP [dm6]	G	C	6.946e^-6	0.244	UPSTREAM CG13723 INTRON CR43870
2R	15894045	2R_15894045_SNP [dm3] 2R_20006540_SNP [dm6]	T	A	7.078e^-6	0.244	UPSTREAM CR44628 INTERGENIC
X	20291346	X_20291346_SNP [dm3] X_20420319_SNP [dm6]	G	T	7.116e^-6	0.244	DOWNSTREAM Pp4-19C INTRON Obp19d	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5578149	2L_5578149_SNP [dm3] 2L_5578149_SNP [dm6]	A	G	7.231e^-6	0.244	INTERGENIC
2L	710257	2L_710257_SNP [dm3] 2L_710257_SNP [dm6]	T	G	7.379e^-6	0.244	UPSTREAM CR44988 INTRON ds
2L	5577793	2L_5577793_SNP [dm3] 2L_5577793_SNP [dm6]	T	A	7.425e^-6	0.244	INTERGENIC
3L	12438234	3L_12438234_SNP [dm3] 3L_12445134_SNP [dm6]	A	G	7.658e^-6	0.245	INTERGENIC
3L	12502549	3L_12502549_SNP [dm3] 3L_12509449_SNP [dm6]	C	T	7.715e^-6	0.245	SYNONYMOUS_CODING sti	TF binding site mE1_TFBS_sens
3L	12405594	3L_12405594_SNP [dm3] 3L_12412494_SNP [dm6]	G	A	8.423e^-6	0.258	INTRON CG32103
2L	7777215	2L_7777215_SNP [dm3] 2L_7777215_SNP [dm6]	G	T	8.501e^-6	0.258	NON_SYNONYMOUS_CODING CG7179	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	3509585	2L_3509585_SNP [dm3] 2L_3509585_SNP [dm6]	G	A	8.518e^-6	0.258	SYNONYMOUS_CODING CG31954 DOWNSTREAM CR45299 & 2 others
X	5439660	X_5439660_INS [dm3] X_5545627_INS [dm6]	A	AA	8.665e^-6	0.258	INTRON Vsx2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_eve mE1_TFBS_HSA
3L	12405591	3L_12405591_SNP [dm3] 3L_12412491_SNP [dm6]	A	G	8.807e^-6	0.258	INTRON CG32103
3L	18205448	3L_18205448_SNP [dm3] 3L_18212348_SNP [dm6]	A	T	9.294e^-6	0.26	INTERGENIC
3L	15695863	3L_15695863_SNP [dm3] 3L_15702763_SNP [dm6]	G	A	9.357e^-6	0.26	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
2R	10676596	2R_10676596_SNP [dm3] 2R_14789091_SNP [dm6]	G	T	9.399e^-6	0.26	INTRON kn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	18133280	3L_18133280_SNP [dm3] 3L_18140180_SNP [dm6]	A	G	9.470e^-6	0.26	INTRON gk	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	15920367	2L_15920367_SNP [dm3] 2L_15920367_SNP [dm6]	T	C	9.575e^-6	0.26	INTRON beat-Ib
2R	10589092	2R_10589092_SNP [dm3] 2R_14701587_SNP [dm6]	G	A	1.032e^-5	0.277	INTRON mspo
2L	7297674	2L_7297674_SNP [dm3] 2L_7297674_SNP [dm6]	G	T	1.059e^-5	0.28	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2L	7139978	2L_7139978_SNP [dm3] 2L_7139978_SNP [dm6]	A	G	1.095e^-5	0.285	INTRON Pvf3	TF binding site BDTNP1_TFBS_slp1
2R	10453850	2R_10453850_SNP [dm3] 2R_14566345_SNP [dm6]	T	C	1.122e^-5	0.285	INTRON ttv
3L	17256767	3L_17256767_SNP [dm3] 3L_17263667_SNP [dm6]	T	C	1.123e^-5	0.285	UPSTREAM CG13723 INTRON CR43870
2L	15886182	2L_15886182_SNP [dm3] 2L_15886182_SNP [dm6]	T	C	1.162e^-5	0.291	INTERGENIC
2R	10572638	2R_10572638_SNP [dm3] 2R_14685133_SNP [dm6]	A	G	1.189e^-5	0.293	INTRON mspo
3L	5871377	3L_5871377_SNP [dm3] 3L_5878277_SNP [dm6]	T	C	1.284e^-5	0.295	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3512317	2R_3512317_SNP [dm3] 2R_7624812_SNP [dm6]	G	A	1.300e^-5	0.295	INTRON CG43340
2L	6587664	2L_6587664_SNP [dm3] 2L_6587664_SNP [dm6]	G	T	1.321e^-5	0.295	INTRON CG11319
2R	15893987	2R_15893987_SNP [dm3] 2R_20006482_SNP [dm6]	T	A	1.326e^-5	0.295	UPSTREAM CR44628 INTERGENIC
2R	14991593	2R_14991593_SNP [dm3] 2R_19104088_SNP [dm6]	A	T	1.328e^-5	0.295	INTRON 5-HT1A
2L	15919085	2L_15919085_SNP [dm3] 2L_15919085_SNP [dm6]	C	T	1.329e^-5	0.295	INTRON beat-Ib
2R	10705422	2R_10705422_SNP [dm3] 2R_14817917_SNP [dm6]	A	C	1.350e^-5	0.295	UTR_3_PRIME CG10202	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5796045	2L_5796045_SNP [dm3] 2L_5796045_SNP [dm6]	T	C	1.371e^-5	0.295	INTRON CG9171
3R	12335764	3R_12335764_SNP [dm3] 3R_16510042_SNP [dm6]	C	G	1.393e^-5	0.295	INTRON CG42342
2R	3527972	2R_3527972_SNP [dm3] 2R_7640467_SNP [dm6]	C	A	1.401e^-5	0.295	NON_SYNONYMOUS_CODING CG43340	TF binding site mE1_TFBS_cad
3L	18205426	3L_18205426_SNP [dm3] 3L_18212326_SNP [dm6]	A	G	1.413e^-5	0.295	INTERGENIC	TF binding site mE1_TFBS_cnc
2L	13923741	2L_13923741_SNP [dm3] 2L_13923741_SNP [dm6]	G	A	1.463e^-5	0.295	UPSTREAM CG16886 INTRON Ance-3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	7087674	3R_7087674_SNP [dm3] 3R_11261952_SNP [dm6]	C	G	1.471e^-5	0.295	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	13563248	2R_13563248_SNP [dm3] 2R_17675743_SNP [dm6]	G	A	1.472e^-5	0.295	SYNONYMOUS_CODING Sema-1b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	18135219	3L_18135219_SNP [dm3] 3L_18142119_SNP [dm6]	A	G	1.493e^-5	0.295	INTRON gk
3L	5909643	3L_5909643_SNP [dm3] 3L_5916543_SNP [dm6]	T	C	1.509e^-5	0.295	INTRON CG13288
2R	15894067	2R_15894067_SNP [dm3] 2R_20006562_SNP [dm6]	T	A	1.509e^-5	0.295	UPSTREAM CR44628 INTERGENIC
3L	12443140	3L_12443140_INS [dm3] 3L_12450040_INS [dm6]	A	AT	1.511e^-5	0.295	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2R	10585509	2R_10585509_SNP [dm3] 2R_14698004_SNP [dm6]	G	T	1.515e^-5	0.295	INTRON mspo
2R	15894034	2R_15894034_SNP [dm3] 2R_20006529_SNP [dm6]	T	C	1.521e^-5	0.295	UPSTREAM CR44628 INTERGENIC
3L	7063942	3L_7063942_SNP [dm3] 3L_7070842_SNP [dm6]	G	A	1.524e^-5	0.295	INTRON CG8641
2L	7139984	2L_7139984_SNP [dm3] 2L_7139984_SNP [dm6]	T	G	1.545e^-5	0.296	INTRON Pvf3
2L	10208831	2L_10208831_SNP [dm3] 2L_10208831_SNP [dm6]	T	G	1.590e^-5	0.301	UPSTREAM CR44845 INTRON CG5731 EXON CR44845	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3L	12438260	3L_12438260_SNP [dm3] 3L_12445160_SNP [dm6]	T	C	1.624e^-5	0.305	INTERGENIC
3L	12438276	3L_12438276_SNP [dm3] 3L_12445176_SNP [dm6]	A	T	1.708e^-5	0.315	INTERGENIC
3L	8974481	3L_8974481_SNP [dm3] 3L_8981381_SNP [dm6]	A	T	1.714e^-5	0.315	UPSTREAM CG13314 DOWNSTREAM Galk INTERGENIC
3L	18493549	3L_18493549_SNP [dm3] 3L_18500449_SNP [dm6]	C	G	1.729e^-5	0.315	INTRON AstC-R2	TF binding site mE1_TFBS_HSA
2L	9296937	2L_9296937_SNP [dm3] 2L_9296937_SNP [dm6]	C	T	1.791e^-5	0.323	UTR_3_PRIME Ggamma30A
2L	7140341	2L_7140341_SNP [dm3] 2L_7140341_SNP [dm6]	A	G	1.865e^-5	0.328	INTRON Pvf3
2L	15884241	2L_15884241_SNP [dm3] 2L_15884241_SNP [dm6]	T	G	1.879e^-5	0.328	INTERGENIC
2R	10371677	2R_10371677_SNP [dm3] 2R_14484172_SNP [dm6]	G	T	1.895e^-5	0.328	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	17792951	2R_17792951_SNP [dm3] 2R_21905446_SNP [dm6]	G	A	1.904e^-5	0.328	INTRON Fili
2L	5578022	2L_5578022_SNP [dm3] 2L_5578022_SNP [dm6]	T	C	1.906e^-5	0.328	INTERGENIC
3L	18125955	3L_18125955_SNP [dm3] 3L_18132855_SNP [dm6]	A	T	1.935e^-5	0.33	UPSTREAM Cyp312a1 INTERGENIC
2L	7777088	2L_7777088_SNP [dm3] 2L_7777088_SNP [dm6]	A	G	1.981e^-5	0.335	NON_SYNONYMOUS_CODING CG7179	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	17042601	2R_17042601_SNP [dm3] 2R_21155096_SNP [dm6]	C	T	2.000e^-5	0.335	NON_SYNONYMOUS_CODING CG30389	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10815059	2R_10815059_SNP [dm3] 2R_14927554_SNP [dm6]	C	T	2.059e^-5	0.34	INTRON CG10249	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	14991594	2R_14991594_SNP [dm3] 2R_19104089_SNP [dm6]	A	T	2.069e^-5	0.34	INTRON 5-HT1A
2R	19028919	2R_19028919_DEL [dm3] 2R_23141396_DEL [dm6]	TG	T	2.160e^-5	0.349	UPSTREAM CG13544 & 1 other INTERGENIC
2L	19195125	2L_19195125_SNP [dm3] 2L_19195125_SNP [dm6]	C	T	2.210e^-5	0.349	INTRON drl	regulatory region REDfly_CRMs
3L	18133248	3L_18133248_DEL [dm3] 3L_18140148_DEL [dm6]	TTA	T	2.263e^-5	0.349	INTRON gk	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2R	10368189	2R_10368189_SNP [dm3] 2R_14480684_SNP [dm6]	G	C	2.264e^-5	0.349	UPSTREAM L INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1
2R	3521945	2R_3521945_SNP [dm3] 2R_7634440_SNP [dm6]	C	A	2.281e^-5	0.349	DOWNSTREAM CG43341 INTRON CG43340 EXON CR45131
2R	14991591	2R_14991591_SNP [dm3] 2R_19104086_SNP [dm6]	A	T	2.287e^-5	0.349	INTRON 5-HT1A
3L	5910023	3L_5910023_SNP [dm3] 3L_5916923_SNP [dm6]	C	T	2.302e^-5	0.349	NON_SYNONYMOUS_CODING CG13288 DOWNSTREAM CG10483
2R	10721104	2R_10721104_SNP [dm3] 2R_14833599_SNP [dm6]	G	A	2.318e^-5	0.349	NON_SYNONYMOUS_CODING CG10205 UTR_3_PRIME CG10205
2L	9296990	2L_9296990_SNP [dm3] 2L_9296990_SNP [dm6]	A	G	2.337e^-5	0.349	UTR_3_PRIME Ggamma30A
3L	14358347	3L_14358347_SNP [dm3] 3L_14365247_SNP [dm6]	G	A	2.337e^-5	0.349	INTRON fz	TF binding site BDTNP1_TFBS_dl
2R	10460322	2R_10460322_SNP [dm3] 2R_14572817_SNP [dm6]	C	A	2.360e^-5	0.349	SYNONYMOUS_CODING LamC INTRON ttv
3R	12316479	3R_12316479_SNP [dm3] 3R_16490757_SNP [dm6]	T	C	2.361e^-5	0.349	SYNONYMOUS_CODING Cad89D
3L	15686858	3L_15686858_SNP [dm3] 3L_15693758_SNP [dm6]	T	A	2.375e^-5	0.349	INTERGENIC
2R	7591864	2R_7591864_SNP [dm3] 2R_11704359_SNP [dm6]	G	A	2.379e^-5	0.349	DOWNSTREAM CR45377 INTERGENIC
3L	14189692	3L_14189692_SNP [dm3] 3L_14196592_SNP [dm6]	A	T	2.422e^-5	0.352	INTRON nuf	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2R	18771403	2R_18771403_SNP [dm3] 2R_22883880_SNP [dm6]	A	T	2.447e^-5	0.352	INTRON CG3499	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	18134481	3L_18134481_INS [dm3] 3L_18141381_INS [dm6]	T	TAT	2.471e^-5	0.352	INTRON gk
3L	15694186	3L_15694186_SNP [dm3] 3L_15701086_SNP [dm6]	G	A	2.497e^-5	0.352	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	15654377	3L_15654377_SNP [dm3] 3L_15661277_SNP [dm6]	G	T	2.529e^-5	0.352	NON_SYNONYMOUS_CODING Eig71Ek UPSTREAM CG43082 & 1 other DOWNSTREAM Eig71Ei	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	15894119	2R_15894119_SNP [dm3] 2R_20006614_SNP [dm6]	T	C	2.538e^-5	0.352	UPSTREAM CR44628 INTERGENIC
2R	15894051	2R_15894051_SNP [dm3] 2R_20006546_SNP [dm6]	G	A	2.543e^-5	0.352	UPSTREAM CR44628 INTERGENIC
2L	3509583	2L_3509583_SNP [dm3] 2L_3509583_SNP [dm6]	T	C	2.620e^-5	0.352	SYNONYMOUS_CODING CG31954 DOWNSTREAM CR45299 & 2 others
2R	14991585	2R_14991585_SNP [dm3] 2R_19104080_SNP [dm6]	C	G	2.633e^-5	0.352	INTRON 5-HT1A
2L	11879542	2L_11879542_SNP [dm3] 2L_11879542_SNP [dm6]	T	C	2.664e^-5	0.352	INTRON Pde1c
2L	19237188	2L_19237188_SNP [dm3] 2L_19237188_SNP [dm6]	G	T	2.693e^-5	0.352	INTERGENIC
2L	7971500	2L_7971500_SNP [dm3] 2L_7971500_SNP [dm6]	C	G	2.710e^-5	0.352	INTRON Snoo
2R	17301627	2R_17301627_SNP [dm3] 2R_21414122_SNP [dm6]	G	C	2.713e^-5	0.352	INTRON Sdc
3L	18131953	3L_18131953_DEL [dm3] 3L_18138853_DEL [dm6]	GA	G	2.726e^-5	0.352	UPSTREAM gk INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	10666534	2R_10666534_SNP [dm3] 2R_14779029_SNP [dm6]	G	A	2.736e^-5	0.352	INTRON kn
3L	18125633	3L_18125633_SNP [dm3] 3L_18132533_SNP [dm6]	G	A	2.738e^-5	0.352	UTR_5_PRIME Cyp312a1 UPSTREAM Cyp312a1
2R	10608696	2R_10608696_SNP [dm3] 2R_14721191_SNP [dm6]	G	A	2.756e^-5	0.352	INTERGENIC
2L	9252592	2L_9252592_SNP [dm3] 2L_9252592_SNP [dm6]	C	G	2.757e^-5	0.352	INTRON borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17301624	2R_17301624_SNP [dm3] 2R_21414119_SNP [dm6]	A	C	2.776e^-5	0.352	INTRON Sdc
2R	15436212	2R_15436212_SNP [dm3] 2R_19548707_SNP [dm6]	C	T	2.784e^-5	0.352	INTRON sm
2L	9296940	2L_9296940_SNP [dm3] 2L_9296940_SNP [dm6]	T	C	2.810e^-5	0.352	UTR_3_PRIME Ggamma30A
3L	5911824	3L_5911824_INS [dm3] 3L_5918724_INS [dm6]	A	AGAA	2.821e^-5	0.352	INTRON CG10483 EXON CR45167
2L	9253433	2L_9253433_SNP [dm3] 2L_9253433_SNP [dm6]	T	A	2.939e^-5	0.352	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2R	3522951	2R_3522951_SNP [dm3] 2R_7635446_SNP [dm6]	C	T	2.944e^-5	0.352	UPSTREAM CR45131 INTRON CG43340
3R	15186275	3R_15186275_SNP [dm3] 3R_19360553_SNP [dm6]	C	T	2.970e^-5	0.352	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9252480	2L_9252480_SNP [dm3] 2L_9252480_SNP [dm6]	A	G	2.971e^-5	0.352	INTRON borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9252499	2L_9252499_SNP [dm3] 2L_9252499_SNP [dm6]	A	G	2.971e^-5	0.352	INTRON borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3534413	2R_3534413_SNP [dm3] 2R_7646908_SNP [dm6]	A	C	2.986e^-5	0.352	SYNONYMOUS_CODING CG43340 INTRON CG43340	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	20425624	2L_20425624_SNP [dm3] 2L_20425624_SNP [dm6]	T	A	2.993e^-5	0.352	UPSTREAM CG15130 & 1 other INTERGENIC
3L	12438296	3L_12438296_SNP [dm3] 3L_12445196_SNP [dm6]	C	A	3.018e^-5	0.352	INTERGENIC
3L	16018544	3L_16018544_SNP [dm3] 3L_16025444_SNP [dm6]	C	T	3.032e^-5	0.352	INTRON Notum	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	1525709	2L_1525709_SNP [dm3] 2L_1525709_SNP [dm6]	C	T	3.069e^-5	0.352	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	16381644	2L_16381644_SNP [dm3] 2L_16381644_SNP [dm6]	G	A	3.101e^-5	0.352	INTERGENIC
2L	14069788	2L_14069788_SNP [dm3] 2L_14069788_SNP [dm6]	G	A	3.122e^-5	0.352	INTRON nAChRalpha5
3L	18247453	3L_18247453_SNP [dm3] 3L_18254353_SNP [dm6]	A	T	3.124e^-5	0.352	INTERGENIC
2R	7473616	2R_7473616_SNP [dm3] 2R_11586111_SNP [dm6]	G	A	3.125e^-5	0.352	SYNONYMOUS_CODING tou
2L	9255723	2L_9255723_SNP [dm3] 2L_9255723_SNP [dm6]	T	C	3.183e^-5	0.352	UPSTREAM lectin-30A & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_z
2R	10572661	2R_10572661_SNP [dm3] 2R_14685156_SNP [dm6]	A	C	3.293e^-5	0.352	INTRON mspo
2L	7971515	2L_7971515_SNP [dm3] 2L_7971515_SNP [dm6]	A	G	3.297e^-5	0.352	INTRON Snoo
2L	9254412	2L_9254412_SNP [dm3] 2L_9254412_SNP [dm6]	G	A	3.302e^-5	0.352	SYNONYMOUS_CODING lectin-30A
3L	18135152	3L_18135152_SNP [dm3] 3L_18142052_SNP [dm6]	C	T	3.312e^-5	0.352	INTRON gk
3R	13954283	3R_13954283_SNP [dm3] 3R_18128561_SNP [dm6]	T	A	3.319e^-5	0.352	INTRON sr
2R	10716233	2R_10716233_SNP [dm3] 2R_14828728_SNP [dm6]	T	A	3.321e^-5	0.352	INTERGENIC	TF binding site mE1_TFBS_sens
2L	7774624	2L_7774624_SNP [dm3] 2L_7774624_SNP [dm6]	A	G	3.334e^-5	0.352	UTR_3_PRIME CG7191
2R	14991583	2R_14991583_SNP [dm3] 2R_19104078_SNP [dm6]	T	A	3.336e^-5	0.352	INTRON 5-HT1A
2R	19644503	2R_19644503_SNP [dm3] 2R_23756980_SNP [dm6]	T	G	3.365e^-5	0.352	SYNONYMOUS_CODING CG9850 INTRON CG9850
2L	9252708	2L_9252708_SNP [dm3] 2L_9252708_SNP [dm6]	G	A	3.374e^-5	0.352	SYNONYMOUS_CODING borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2907346	2L_2907346_SNP [dm3] 2L_2907346_SNP [dm6]	A	T	3.383e^-5	0.352	INTRON lilli	TF binding site mE1_TFBS_bab1
2R	10154268	2R_10154268_SNP [dm3] 2R_14266763_SNP [dm6]	T	C	3.389e^-5	0.352	INTRON CG8547
3L	7840647	3L_7840647_SNP [dm3] 3L_7847547_SNP [dm6]	A	T	3.407e^-5	0.352	INTRON Pdp1	regulatory region REDfly_CRMs TF binding site mE1_TFBS_Trl
2R	10786130	2R_10786130_SNP [dm3] 2R_14898625_SNP [dm6]	G	C	3.441e^-5	0.352	UPSTREAM Cyp317a1 INTRON Cyp317a1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	6100784	3R_6100784_SNP [dm3] 3R_10275062_SNP [dm6]	A	G	3.460e^-5	0.352	INTRON CG43143
3R	12895058	3R_12895058_SNP [dm3] 3R_17069336_SNP [dm6]	T	G	3.475e^-5	0.352	UTR_3_PRIME Dad	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	18600213	X_18600213_SNP [dm3] X_18706180_SNP [dm6]	C	G	3.497e^-5	0.352	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	14362763	2L_14362763_SNP [dm3] 2L_14362763_SNP [dm6]	G	A	3.506e^-5	0.352	SYNONYMOUS_CODING spel1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	20234785	2L_20234785_SNP [dm3] 2L_20234785_SNP [dm6]	T	G	3.520e^-5	0.352	INTERGENIC
2L	20672879	2L_20672879_SNP [dm3] 2L_20672879_SNP [dm6]	C	T	3.523e^-5	0.352	INTRON CG31678	TF binding site BDTNP1_TFBS_twi
2L	19907508	2L_19907508_SNP [dm3] 2L_19907508_SNP [dm6]	A	C	3.532e^-5	0.352	INTRON sick
2R	10788280	2R_10788280_SNP [dm3] 2R_14900775_SNP [dm6]	T	C	3.540e^-5	0.352	SYNONYMOUS_CODING Cyp317a1 DOWNSTREAM CG10249	TF binding site mE1_TFBS_sens
2L	16401089	2L_16401089_SNP [dm3] 2L_16401089_SNP [dm6]	G	A	3.544e^-5	0.352	INTRON CG5888
3L	15698564	3L_15698564_SNP [dm3] 3L_15705464_SNP [dm6]	T	A	3.549e^-5	0.352	INTERGENIC	TF binding site mE1_TFBS_cad
2L	9253255	2L_9253255_SNP [dm3] 2L_9253255_SNP [dm6]	A	G	3.606e^-5	0.354	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	18126805	3L_18126805_SNP [dm3] 3L_18133705_SNP [dm6]	T	C	3.616e^-5	0.354	INTERGENIC
3L	4799946	3L_4799946_SNP [dm3] 3L_4799946_SNP [dm6]	C	A	3.663e^-5	0.354	UPSTREAM CR45740 INTERGENIC
3L	19308574	3L_19308574_SNP [dm3] 3L_19315474_SNP [dm6]	G	A	3.718e^-5	0.354	INTRON pip	TF binding site BDTNP1_TFBS_da
3L	15698563	3L_15698563_SNP [dm3] 3L_15705463_SNP [dm6]	T	A	3.720e^-5	0.354	INTERGENIC	TF binding site mE1_TFBS_cad
2R	12094997	2R_12094997_SNP [dm3] 2R_16207492_SNP [dm6]	G	A	3.722e^-5	0.354	DOWNSTREAM tRNA:CR30237 INTRON mrj	TF binding site BDTNP1_TFBS_dl
2R	18874837	2R_18874837_SNP [dm3] 2R_22987314_SNP [dm6]	T	A	3.723e^-5	0.354	UPSTREAM CG9897 DOWNSTREAM CR42742 INTRON twi
3L	5912051	3L_5912051_SNP [dm3] 3L_5918951_SNP [dm6]	G	A	3.746e^-5	0.354	INTRON CG10483 EXON CR45167
3L	7840529	3L_7840529_SNP [dm3] 3L_7847429_SNP [dm6]	C	G	3.760e^-5	0.354	INTRON Pdp1	regulatory region REDfly_CRMs TF binding site mE1_TFBS_Trl
3L	18126738	3L_18126738_DEL [dm3] 3L_18133638_DEL [dm6]	TAACGAACATGAAGTGAATA...	T	3.781e^-5	0.354	UPSTREAM Cyp312a1 INTERGENIC
2R	10788404	2R_10788404_SNP [dm3] 2R_14900899_SNP [dm6]	C	T	3.820e^-5	0.354	SYNONYMOUS_CODING Cyp317a1 DOWNSTREAM CG10249
2L	14366476	2L_14366476_SNP [dm3] 2L_14366476_SNP [dm6]	C	A	3.871e^-5	0.354	UTR_3_PRIME spel1 DOWNSTREAM spel1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	18493544	3L_18493544_SNP [dm3] 3L_18500444_SNP [dm6]	G	T	3.892e^-5	0.354	INTRON AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	11879551	2L_11879551_SNP [dm3] 2L_11879551_SNP [dm6]	T	C	3.896e^-5	0.354	INTRON Pde1c
3L	7875440	3L_7875440_SNP [dm3] 3L_7882340_SNP [dm6]	C	G	3.902e^-5	0.354	INTRON CG32365
3L	18260459	3L_18260459_SNP [dm3] 3L_18267359_SNP [dm6]	T	A	3.908e^-5	0.354	INTERGENIC
2R	11214183	2R_11214183_SNP [dm3] 2R_15326678_SNP [dm6]	C	A	3.913e^-5	0.354	UPSTREAM CG8157 DOWNSTREAM CG8160 INTERGENIC
3R	14531749	3R_14531749_SNP [dm3] 3R_18706027_SNP [dm6]	G	C	3.945e^-5	0.354	SYNONYMOUS_CODING Cha UTR_5_PRIME VAChT
3L	15697646	3L_15697646_SNP [dm3] 3L_15704546_SNP [dm6]	G	A	3.995e^-5	0.354	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	15697660	3L_15697660_SNP [dm3] 3L_15704560_SNP [dm6]	A	G	3.995e^-5	0.354	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2R	14520318	2R_14520318_SNP [dm3] 2R_18632813_SNP [dm6]	T	A	3.999e^-5	0.354	UTR_3_PRIME CG30122 UPSTREAM CG5482
2L	9253529	2L_9253529_SNP [dm3] 2L_9253529_SNP [dm6]	C	A	4.002e^-5	0.354	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	11617751	3R_11617751_SNP [dm3] 3R_15792029_SNP [dm6]	A	T	4.016e^-5	0.354	NON_SYNONYMOUS_CODING c_3_G UPSTREAM Acyp2	TF binding site BDTNP1_TFBS_dl
2L	16594059	2L_16594059_SNP [dm3] 2L_16594059_SNP [dm6]	A	G	4.024e^-5	0.354	INTRON CG42389
X	20532495	X_20532495_SNP [dm3] X_20661468_SNP [dm6]	T	G	4.122e^-5	0.358	UPSTREAM CG1835 DOWNSTREAM Cyp6v1 INTERGENIC
3L	15679513	3L_15679513_SNP [dm3] 3L_15686413_SNP [dm6]	A	T	4.160e^-5	0.358	UTR_3_PRIME pgant8 & 1 other
3L	6529280	3L_6529280_SNP [dm3] 3L_6536180_SNP [dm6]	G	T	4.162e^-5	0.358	INTRON sfl
2L	20248573	2L_20248573_SNP [dm3] 2L_20248573_SNP [dm6]	C	T	4.200e^-5	0.358	DOWNSTREAM CR40172 EXON CR40341
2L	1879862	2L_1879862_SNP [dm3] 2L_1879862_SNP [dm6]	C	G	4.204e^-5	0.358	INTRON CG31663
2L	9261424	2L_9261424_SNP [dm3] 2L_9261424_SNP [dm6]	G	A	4.206e^-5	0.358	DOWNSTREAM CR45262 INTRON Ggamma30A
2R	10705413	2R_10705413_SNP [dm3] 2R_14817908_SNP [dm6]	C	A	4.230e^-5	0.358	UTR_3_PRIME CG10202	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	18126760	3L_18126760_DEL [dm3] 3L_18133660_DEL [dm6]	TATTGAATTA	T	4.249e^-5	0.358	UPSTREAM Cyp312a1 INTERGENIC
2L	1879860	2L_1879860_SNP [dm3] 2L_1879860_SNP [dm6]	G	T	4.255e^-5	0.358	INTRON CG31663
3L	16231440	3L_16231440_SNP [dm3] 3L_16238340_SNP [dm6]	C	T	4.261e^-5	0.358	INTRON l_3_72Dr
2L	5577767	2L_5577767_SNP [dm3] 2L_5577767_SNP [dm6]	T	C	4.300e^-5	0.36	INTERGENIC
3L	18260765	3L_18260765_SNP [dm3] 3L_18267665_SNP [dm6]	G	A	4.345e^-5	0.361	INTERGENIC
2L	9253428	2L_9253428_INS [dm3] 2L_9253428_INS [dm6]	G	CACGACATAAAAACAAAAA...	4.348e^-5	0.361	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	14405478	3R_14405478_SNP [dm3] 3R_18579756_SNP [dm6]	T	C	4.434e^-5	0.366	INTRON fray & 1 other
3R	15186102	3R_15186102_SNP [dm3] 3R_19360380_SNP [dm6]	A	C	4.464e^-5	0.367	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	18493581	3L_18493581_SNP [dm3] 3L_18500481_SNP [dm6]	C	A	4.476e^-5	0.367	INTRON AstC-R2
3L	18247459	3L_18247459_SNP [dm3] 3L_18254359_SNP [dm6]	A	G	4.510e^-5	0.368	INTERGENIC
2L	9253430	2L_9253430_SNP [dm3] 2L_9253430_SNP [dm6]	T	A	4.547e^-5	0.368	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2R	19644500	2R_19644500_SNP [dm3] 2R_23756977_SNP [dm6]	G	A	4.566e^-5	0.368	SYNONYMOUS_CODING CG9850 INTRON CG9850
3L	16649763	3L_16649763_SNP [dm3] 3L_16656663_SNP [dm6]	T	C	4.569e^-5	0.368	INTRON Baldspot
X	20291260	X_20291260_SNP [dm3] X_20420233_SNP [dm6]	C	T	4.612e^-5	0.368	SYNONYMOUS_CODING Obp19d DOWNSTREAM Pp4-19C	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	14405466	3R_14405466_SNP [dm3] 3R_18579744_SNP [dm6]	A	C	4.638e^-5	0.368	INTRON fray & 1 other
3R	14405472	3R_14405472_SNP [dm3] 3R_18579750_SNP [dm6]	A	C	4.638e^-5	0.368	INTRON fray & 1 other
3L	18139124	3L_18139124_INS [dm3] 3L_18146024_INS [dm6]	G	GG	4.661e^-5	0.368	DOWNSTREAM gk INTERGENIC
X	20291223	X_20291223_SNP [dm3] X_20420196_SNP [dm6]	C	T	4.665e^-5	0.368	NON_SYNONYMOUS_CODING Obp19d DOWNSTREAM Pp4-19C	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	15677736	3L_15677736_SNP [dm3] 3L_15684636_SNP [dm6]	G	A	4.756e^-5	0.369	INTRON pgant8
3L	15697586	3L_15697586_INS [dm3] 3L_15704486_INS [dm6]	A	AGAA	4.830e^-5	0.369	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	18247458	3L_18247458_SNP [dm3] 3L_18254358_SNP [dm6]	T	C	4.861e^-5	0.369	INTERGENIC
3L	18493341	3L_18493341_SNP [dm3] 3L_18500241_SNP [dm6]	A	G	4.873e^-5	0.369	INTRON AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	15677591	3L_15677591_SNP [dm3] 3L_15684491_SNP [dm6]	T	C	4.877e^-5	0.369	INTRON pgant8
2R	10585346	2R_10585346_SNP [dm3] 2R_14697841_SNP [dm6]	C	T	4.884e^-5	0.369	INTRON mspo
2R	3447644	2R_3447644_SNP [dm3] 2R_7560139_SNP [dm6]	C	A	4.941e^-5	0.369	SYNONYMOUS_CODING Corin	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	12898467	3R_12898467_SNP [dm3] 3R_17072745_SNP [dm6]	T	A	4.945e^-5	0.369	UTR_5_PRIME mRpS11 UPSTREAM Ns1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9259902	2L_9259902_DEL [dm3] 2L_9259902_DEL [dm6]	CTCTTC	C	4.971e^-5	0.369	INTRON Ggamma30A
3R	12892254	3R_12892254_SNP [dm3] 3R_17066532_SNP [dm6]	C	A	4.993e^-5	0.369	INTRON Dad	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
3L	18129935	3L_18129935_SNP [dm3] 3L_18136835_SNP [dm6]	A	C	5.011e^-5	0.369	UPSTREAM CR44669 INTERGENIC
2R	18382525	2R_18382525_SNP [dm3] 2R_22495020_SNP [dm6]	C	T	5.016e^-5	0.369	UTR_3_PRIME px DOWNSTREAM CG4610
3R	13679264	3R_13679264_SNP [dm3] 3R_17853542_SNP [dm6]	C	G	5.022e^-5	0.369	INTRON tinc	TF binding site mE1_TFBS_inv
3L	18144068	3L_18144068_SNP [dm3] 3L_18150968_SNP [dm6]	G	T	5.035e^-5	0.369	INTRON CG7330
3R	25403352	3R_25403352_SNP [dm3] 3R_29577630_SNP [dm6]	G	A	5.054e^-5	0.369	INTERGENIC
3L	7894712	3L_7894712_SNP [dm3] 3L_7901612_SNP [dm6]	T	C	5.072e^-5	0.369	SPLICE_SITE_REGION pbl INTRON pbl
X	6665704	X_6665704_SNP [dm3] X_6771671_SNP [dm6]	G	C	5.077e^-5	0.369	DOWNSTREAM CG14438 INTRON COQ7 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_sna mE1_TFBS_HSA
2R	3511700	2R_3511700_SNP [dm3] 2R_7624195_SNP [dm6]	G	A	5.077e^-5	0.369	INTRON CG43340
3L	18136369	3L_18136369_SNP [dm3] 3L_18143269_SNP [dm6]	T	A	5.106e^-5	0.369	INTRON gk
3L	16908903	3L_16908903_SNP [dm3] 3L_16915803_SNP [dm6]	T	G	5.116e^-5	0.369	UPSTREAM Lmpt INTRON Lmpt	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3R	12894168	3R_12894168_SNP [dm3] 3R_17068446_SNP [dm6]	G	A	5.144e^-5	0.369	INTRON Dad
3L	15712680	3L_15712680_SNP [dm3] 3L_15719580_SNP [dm6]	C	G	5.147e^-5	0.369	NON_SYNONYMOUS_CODING CG42570
3L	15677592	3L_15677592_SNP [dm3] 3L_15684492_SNP [dm6]	A	T	5.161e^-5	0.369	INTRON pgant8
3L	18144146	3L_18144146_SNP [dm3] 3L_18151046_SNP [dm6]	C	T	5.258e^-5	0.369	INTRON CG7330
3L	7886311	3L_7886311_SNP [dm3] 3L_7893211_SNP [dm6]	T	G	5.260e^-5	0.369	INTRON CG32365
2L	14362790	2L_14362790_SNP [dm3] 2L_14362790_SNP [dm6]	A	G	5.261e^-5	0.369	SYNONYMOUS_CODING spel1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	1874948	2L_1874948_SNP [dm3] 2L_1874948_SNP [dm6]	T	C	5.277e^-5	0.369	INTRON CG31663
X	6665109	X_6665109_SNP [dm3] X_6771076_SNP [dm6]	A	C	5.295e^-5	0.369	UPSTREAM COQ7 DOWNSTREAM shf & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt
X	6665118	X_6665118_SNP [dm3] X_6771085_SNP [dm6]	A	G	5.295e^-5	0.369	UPSTREAM COQ7 DOWNSTREAM shf & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt
2R	10674472	2R_10674472_SNP [dm3] 2R_14786967_SNP [dm6]	A	G	5.382e^-5	0.369	INTRON kn	TF binding site BDTNP1_TFBS_dl
2R	10675354	2R_10675354_SNP [dm3] 2R_14787849_SNP [dm6]	C	A	5.382e^-5	0.369	INTRON kn	TF binding site BDTNP1_TFBS_da
2L	14378554	2L_14378554_SNP [dm3] 2L_14378554_SNP [dm6]	G	A	5.396e^-5	0.369	UTR_3_PRIME ppk
2R	11100272	2R_11100272_SNP [dm3] 2R_15212767_SNP [dm6]	G	T	5.404e^-5	0.369	SYNONYMOUS_CODING row	TF binding site BDTNP1_TFBS_dl
2L	4915920	2L_4915920_SNP [dm3] 2L_4915920_SNP [dm6]	T	C	5.479e^-5	0.369	UPSTREAM hoe1 INTRON hoe1
2L	4915939	2L_4915939_SNP [dm3] 2L_4915939_SNP [dm6]	T	C	5.479e^-5	0.369	UPSTREAM hoe1 INTRON hoe1
3R	14405486	3R_14405486_INS [dm3] 3R_18579764_INS [dm6]	T	TTATTTTCCTCTAGTTCTAT...	5.507e^-5	0.369	INTRON fray & 1 other
2R	19029368	2R_19029368_SNP [dm3] 2R_23141845_SNP [dm6]	C	T	5.510e^-5	0.369	UPSTREAM Klp59D INTERGENIC
2R	19030024	2R_19030024_SNP [dm3] 2R_23142501_SNP [dm6]	C	A	5.510e^-5	0.369	SYNONYMOUS_CODING Klp59D	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	19030819	2R_19030819_SNP [dm3] 2R_23143296_SNP [dm6]	C	T	5.510e^-5	0.369	SYNONYMOUS_CODING Klp59D	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	12898934	3R_12898934_SNP [dm3] 3R_17073212_SNP [dm6]	G	C	5.511e^-5	0.369	UPSTREAM Ns1 DOWNSTREAM Keap1 INTRON mRpS11	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	18493561	3L_18493561_SNP [dm3] 3L_18500461_SNP [dm6]	T	A	5.528e^-5	0.369	INTRON AstC-R2
2L	4915900	2L_4915900_SNP [dm3] 2L_4915900_SNP [dm6]	A	T	5.567e^-5	0.369	UPSTREAM hoe1 INTRON hoe1
3L	18138720	3L_18138720_SNP [dm3] 3L_18145620_SNP [dm6]	T	C	5.567e^-5	0.369	DOWNSTREAM gk INTERGENIC
3L	17256716	3L_17256716_SNP [dm3] 3L_17263616_SNP [dm6]	G	T	5.584e^-5	0.369	UPSTREAM CG13723 INTRON CR43870
3R	15186199	3R_15186199_SNP [dm3] 3R_19360477_SNP [dm6]	C	A	5.603e^-5	0.369	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 mE1_TFBS_HSA
X	20289762	X_20289762_SNP [dm3] X_20418735_SNP [dm6]	G	T	5.610e^-5	0.369	NON_SYNONYMOUS_CODING Obp19c UPSTREAM Obp19d DOWNSTREAM Obp19b	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2R	10616116	2R_10616116_SNP [dm3] 2R_14728611_SNP [dm6]	G	A	5.614e^-5	0.369	INTERGENIC
3L	15678604	3L_15678604_SNP [dm3] 3L_15685504_SNP [dm6]	A	G	5.640e^-5	0.37	NON_SYNONYMOUS_CODING pgant8 DOWNSTREAM CG34452	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	14362796	2L_14362796_SNP [dm3] 2L_14362796_SNP [dm6]	A	T	5.666e^-5	0.37	SYNONYMOUS_CODING spel1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	19028952	2R_19028952_SNP [dm3] 2R_23141429_SNP [dm6]	C	T	5.680e^-5	0.37	UPSTREAM CG13544 & 1 other INTERGENIC
2L	9258652	2L_9258652_SNP [dm3] 2L_9258652_SNP [dm6]	A	T	5.714e^-5	0.37	INTRON Ggamma30A
X	20285380	X_20285380_SNP [dm3] X_20414353_SNP [dm6]	A	C	5.729e^-5	0.37	UPSTREAM CG15459 & 1 other INTERGENIC	regulatory region REDfly_CRMs
3R	11824357	3R_11824357_SNP [dm3] 3R_15998635_SNP [dm6]	T	C	5.770e^-5	0.37	INTRON srp
2L	12849615	2L_12849615_SNP [dm3] 2L_12849615_SNP [dm6]	A	G	5.803e^-5	0.37	INTERGENIC
3L	13846943	3L_13846943_SNP [dm3] 3L_13853843_SNP [dm6]	G	C	5.814e^-5	0.37	SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad
2R	11798597	2R_11798597_SNP [dm3] 2R_15911092_SNP [dm6]	G	A	5.843e^-5	0.37	INTRON sli	TF binding site mE1_TFBS_HSA
2L	16295884	2L_16295884_SNP [dm3] 2L_16295884_SNP [dm6]	T	C	5.878e^-5	0.37	UTR_3_PRIME Cyp303a1 DOWNSTREAM heix
3L	17256691	3L_17256691_SNP [dm3] 3L_17263591_SNP [dm6]	G	T	5.879e^-5	0.37	UPSTREAM CG13723 INTRON CR43870
3L	12438230	3L_12438230_SNP [dm3] 3L_12445130_SNP [dm6]	T	A	5.887e^-5	0.37	INTERGENIC
3L	20125117	3L_20125117_SNP [dm3] 3L_20132017_SNP [dm6]	T	A	5.892e^-5	0.37	UPSTREAM obst-J DOWNSTREAM CG7335 INTRON gig
3L	17256694	3L_17256694_DEL [dm3] 3L_17263594_DEL [dm6]	GTATTTGCGT	C	5.906e^-5	0.37	UPSTREAM CG13723 INTRON CR43870
2R	19028916	2R_19028916_MNP [dm3] 2R_23141393_MNP [dm6]	GCA	TGG	5.952e^-5	0.37	UPSTREAM CG13544 & 1 other INTERGENIC
3L	18118845	3L_18118845_SNP [dm3] 3L_18125745_SNP [dm6]	T	C	5.965e^-5	0.37	INTERGENIC
3L	18118848	3L_18118848_SNP [dm3] 3L_18125748_SNP [dm6]	A	T	5.965e^-5	0.37	INTERGENIC
3R	25403404	3R_25403404_SNP [dm3] 3R_29577682_SNP [dm6]	G	A	6.003e^-5	0.371	INTERGENIC
3L	7048616	3L_7048616_SNP [dm3] 3L_7055516_SNP [dm6]	A	T	6.017e^-5	0.371	INTERGENIC
2L	9253421	2L_9253421_MNP [dm3] 2L_9253421_MNP [dm6]	CCC	GAA	6.072e^-5	0.373	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3L	15653684	3L_15653684_SNP [dm3] 3L_15660584_SNP [dm6]	C	T	6.102e^-5	0.373	UTR_3_PRIME Eig71Ej UPSTREAM Eig71Ek DOWNSTREAM Eig71Ei
2R	10371485	2R_10371485_SNP [dm3] 2R_14483980_SNP [dm6]	C	T	6.120e^-5	0.373	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	12892403	3R_12892403_SNP [dm3] 3R_17066681_SNP [dm6]	T	G	6.126e^-5	0.373	INTRON Dad	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
2L	9259041	2L_9259041_SNP [dm3] 2L_9259041_SNP [dm6]	T	A	6.153e^-5	0.373	INTRON Ggamma30A
3L	18493524	3L_18493524_SNP [dm3] 3L_18500424_SNP [dm6]	A	T	6.160e^-5	0.373	INTRON AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	6449525	3L_6449525_SNP [dm3] 3L_6456425_SNP [dm6]	A	T	6.182e^-5	0.373	INTRON CG42747	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2L	9259433	2L_9259433_SNP [dm3] 2L_9259433_SNP [dm6]	C	T	6.196e^-5	0.373	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2R	13121762	2R_13121762_SNP [dm3] 2R_17234257_SNP [dm6]	T	G	6.233e^-5	0.373	INTRON mbl
2R	11661653	2R_11661653_SNP [dm3] 2R_15774148_SNP [dm6]	G	C	6.244e^-5	0.373	INTRON Zasp52	TF binding site mE1_TFBS_chinmo
2R	12228554	2R_12228554_SNP [dm3] 2R_16341049_SNP [dm6]	G	A	6.259e^-5	0.373	UTR_3_PRIME Hmgs DOWNSTREAM CG7997
2R	10372170	2R_10372170_SNP [dm3] 2R_14484665_SNP [dm6]	T	C	6.279e^-5	0.373	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_zfh1
3L	5909925	3L_5909925_SNP [dm3] 3L_5916825_SNP [dm6]	T	C	6.355e^-5	0.375	INTRON CG13288
3R	25403361	3R_25403361_SNP [dm3] 3R_29577639_SNP [dm6]	C	A	6.360e^-5	0.375	INTERGENIC
3R	25403380	3R_25403380_SNP [dm3] 3R_29577658_SNP [dm6]	T	A	6.403e^-5	0.376	INTERGENIC
2L	9260169	2L_9260169_SNP [dm3] 2L_9260169_SNP [dm6]	T	C	6.436e^-5	0.376	INTRON Ggamma30A
3R	12890838	3R_12890838_SNP [dm3] 3R_17065116_SNP [dm6]	C	T	6.491e^-5	0.376	INTRON Dad	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	18766892	2L_18766892_SNP [dm3] 2L_18766892_SNP [dm6]	G	T	6.532e^-5	0.376	INTRON ham
2L	16393212	2L_16393212_SNP [dm3] 2L_16393212_SNP [dm6]	C	G	6.604e^-5	0.376	INTERGENIC
2R	10375474	2R_10375474_DEL [dm3] 2R_14487969_DEL [dm6]	TAT	T	6.617e^-5	0.376	INTRON L	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	13563263	2R_13563263_SNP [dm3] 2R_17675758_SNP [dm6]	A	G	6.620e^-5	0.376	SYNONYMOUS_CODING Sema-1b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	17989920	2R_17989920_SNP [dm3] 2R_22102415_SNP [dm6]	T	C	6.637e^-5	0.376	UPSTREAM CG6613 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA
2R	3509677	2R_3509677_SNP [dm3] 2R_7622172_SNP [dm6]	C	A	6.651e^-5	0.376	EXON CR44444
2R	19029450	2R_19029450_SNP [dm3] 2R_23141927_SNP [dm6]	T	C	6.652e^-5	0.376	UPSTREAM Klp59D INTERGENIC
2R	19029871	2R_19029871_SNP [dm3] 2R_23142348_SNP [dm6]	A	C	6.652e^-5	0.376	SYNONYMOUS_CODING Klp59D	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	2375753	3L_2375753_SNP [dm3] 3L_2375753_SNP [dm6]	G	A	6.656e^-5	0.376	SYNONYMOUS_CODING CG9004 DOWNSTREAM CG15877	TF binding site mE1_TFBS_sens
X	5751782	X_5751782_SNP [dm3] X_5857749_SNP [dm6]	C	T	6.728e^-5	0.376	INTERGENIC
2L	9253367	2L_9253367_SNP [dm3] 2L_9253367_SNP [dm6]	A	T	6.736e^-5	0.376	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	16295877	2L_16295877_SNP [dm3] 2L_16295877_SNP [dm6]	T	A	6.737e^-5	0.376	UTR_3_PRIME Cyp303a1 DOWNSTREAM heix
2R	10589477	2R_10589477_SNP [dm3] 2R_14701972_SNP [dm6]	G	C	6.768e^-5	0.376	INTRON mspo
2R	15863357	2R_15863357_SNP [dm3] 2R_19975852_SNP [dm6]	G	A	6.814e^-5	0.376	INTERGENIC
3L	885475	3L_885475_SNP [dm3] 3L_885475_SNP [dm6]	T	C	6.843e^-5	0.376	INTRON CG32479
3L	18493348	3L_18493348_SNP [dm3] 3L_18500248_SNP [dm6]	A	G	6.863e^-5	0.376	INTRON AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	21292259	3R_21292259_DEL [dm3] 3R_25466537_DEL [dm6]	ACACAAGCGCACA...	A	6.864e^-5	0.376	INTRON Fur1
3R	12898151	3R_12898151_SNP [dm3] 3R_17072429_SNP [dm6]	G	T	6.872e^-5	0.376	SYNONYMOUS_CODING Ns1 UPSTREAM mRpS11	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	15687103	3L_15687103_SNP [dm3] 3L_15694003_SNP [dm6]	T	G	6.874e^-5	0.376	INTERGENIC
2L	9259372	2L_9259372_SNP [dm3] 2L_9259372_SNP [dm6]	C	A	6.874e^-5	0.376	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2L	1756200	2L_1756200_SNP [dm3] 2L_1756200_SNP [dm6]	C	G	6.916e^-5	0.376	SYNONYMOUS_CODING Gr22f	TF binding site BDTNP1_TFBS_twi
3L	14362052	3L_14362052_SNP [dm3] 3L_14368952_SNP [dm6]	A	T	6.949e^-5	0.376	UTR_3_PRIME CG13481 DOWNSTREAM CG13481 & 1 other
3L	12451677	3L_12451677_SNP [dm3] 3L_12458577_SNP [dm6]	A	T	6.957e^-5	0.376	INTERGENIC
3R	12335259	3R_12335259_SNP [dm3] 3R_16509537_SNP [dm6]	G	T	6.976e^-5	0.376	INTRON CG42342	TF binding site BDTNP1_TFBS_twi
2R	11797449	2R_11797449_SNP [dm3] 2R_15909944_SNP [dm6]	T	G	6.980e^-5	0.376	INTRON sli	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	15688844	3L_15688844_SNP [dm3] 3L_15695744_SNP [dm6]	T	A	6.992e^-5	0.376	INTERGENIC
2R	10572583	2R_10572583_SNP [dm3] 2R_14685078_SNP [dm6]	T	A	7.002e^-5	0.376	INTRON mspo
3L	15677588	3L_15677588_SNP [dm3] 3L_15684488_SNP [dm6]	T	C	7.050e^-5	0.376	INTRON pgant8
3L	778437	3L_778437_SNP [dm3] 3L_778437_SNP [dm6]	A	G	7.054e^-5	0.376	INTERGENIC
3R	12336679	3R_12336679_SNP [dm3] 3R_16510957_SNP [dm6]	A	T	7.061e^-5	0.376	INTRON CG42342
3R	12894924	3R_12894924_SNP [dm3] 3R_17069202_SNP [dm6]	A	G	7.075e^-5	0.376	UTR_3_PRIME Dad	TF binding site BDTNP1_TFBS_twi
3R	8568378	3R_8568378_SNP [dm3] 3R_12742656_SNP [dm6]	G	A	7.079e^-5	0.376	NON_SYNONYMOUS_CODING CG5999
2L	7140197	2L_7140197_SNP [dm3] 2L_7140197_SNP [dm6]	G	C	7.114e^-5	0.377	INTRON Pvf3
2R	9439242	2R_9439242_SNP [dm3] 2R_13551737_SNP [dm6]	A	T	7.217e^-5	0.381	UPSTREAM CG33156 INTRON CG33156
3L	17559710	3L_17559710_DEL [dm3] 3L_17566610_DEL [dm6]	CAC	C	7.263e^-5	0.382	UPSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	12173532	X_12173532_SNP [dm3] X_12279499_SNP [dm6]	A	G	7.351e^-5	0.382	INTRON Ten-a
2R	10154275	2R_10154275_SNP [dm3] 2R_14266770_SNP [dm6]	A	G	7.356e^-5	0.382	INTRON CG8547
3R	14937278	3R_14937278_SNP [dm3] 3R_19111556_SNP [dm6]	A	G	7.358e^-5	0.382	INTRON CG6040
X	9824874	X_9824874_SNP [dm3] X_9930841_SNP [dm6]	C	A	7.368e^-5	0.382	UPSTREAM snoRNA:Me28S-U1688 INTRON Idgf4	TF binding site mE1_TFBS_Trl
2L	6002371	2L_6002371_SNP [dm3] 2L_6002371_SNP [dm6]	A	G	7.370e^-5	0.382	UTR_3_PRIME Tsp26A
2L	16295887	2L_16295887_SNP [dm3] 2L_16295887_SNP [dm6]	A	T	7.384e^-5	0.382	UTR_3_PRIME Cyp303a1 DOWNSTREAM heix
2R	13023236	2R_13023236_SNP [dm3] 2R_17135731_SNP [dm6]	T	G	7.411e^-5	0.382	UPSTREAM Gbp DOWNSTREAM CG11400 EXON CR44391
3R	25403537	3R_25403537_INS [dm3] 3R_29577815_INS [dm6]	G	GAG	7.418e^-5	0.382	INTERGENIC	TF binding site mE1_TFBS_sens
3L	7920311	3L_7920311_SNP [dm3] 3L_7927211_SNP [dm6]	A	G	7.471e^-5	0.383	INTRON syd
2R	12245315	2R_12245315_SNP [dm3] 2R_16357810_SNP [dm6]	G	A	7.509e^-5	0.383	DOWNSTREAM CR45322 EXON CR43416
2L	9257288	2L_9257288_SNP [dm3] 2L_9257288_SNP [dm6]	C	T	7.519e^-5	0.383	INTRON Ggamma30A	TF binding site BDTNP1_TFBS_z mE1_TFBS_Trl
3R	25403544	3R_25403544_SNP [dm3] 3R_29577822_SNP [dm6]	A	C	7.522e^-5	0.383	INTERGENIC	TF binding site mE1_TFBS_sens
3L	18247469	3L_18247469_SNP [dm3] 3L_18254369_SNP [dm6]	C	T	7.553e^-5	0.383	INTERGENIC
3L	12850608	3L_12850608_SNP [dm3] 3L_12857508_SNP [dm6]	A	G	7.595e^-5	0.383	UTR_3_PRIME CG32107 DOWNSTREAM Ent3	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2R	10711040	2R_10711040_SNP [dm3] 2R_14823535_SNP [dm6]	G	A	7.602e^-5	0.383	DOWNSTREAM CR45329 INTERGENIC
3L	18247412	3L_18247412_SNP [dm3] 3L_18254312_SNP [dm6]	C	T	7.621e^-5	0.383	INTERGENIC
3L	18136202	3L_18136202_SNP [dm3] 3L_18143102_SNP [dm6]	T	A	7.636e^-5	0.383	INTRON gk
2R	19728515	2R_19728515_SNP [dm3] 2R_23840992_SNP [dm6]	C	A	7.639e^-5	0.383	UPSTREAM snoRNA:Psi18S-176 DOWNSTREAM shu & 1 other INTERGENIC
2L	18995624	2L_18995624_SNP [dm3] 2L_18995624_SNP [dm6]	T	C	7.690e^-5	0.385	SYNONYMOUS_CODING CG10650
2L	523903	2L_523903_SNP [dm3] 2L_523903_SNP [dm6]	G	A	7.725e^-5	0.385	UTR_5_PRIME ush INTRON ush	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
2R	17839827	2R_17839827_SNP [dm3] 2R_21952322_SNP [dm6]	G	A	7.779e^-5	0.386	NON_SYNONYMOUS_CODING CG13488
2L	7140774	2L_7140774_SNP [dm3] 2L_7140774_SNP [dm6]	G	C	7.786e^-5	0.386	INTRON Pvf3
2R	10786139	2R_10786139_SNP [dm3] 2R_14898634_SNP [dm6]	C	A	7.838e^-5	0.388	UPSTREAM Cyp317a1 INTRON Cyp317a1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	19728549	2R_19728549_SNP [dm3] 2R_23841026_SNP [dm6]	T	G	7.872e^-5	0.389	UPSTREAM snoRNA:Psi18S-176 DOWNSTREAM shu & 1 other INTERGENIC
2R	10705226	2R_10705226_SNP [dm3] 2R_14817721_SNP [dm6]	T	C	8.022e^-5	0.393	DOWNSTREAM CG10202 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	12850762	3L_12850762_SNP [dm3] 3L_12857662_SNP [dm6]	T	C	8.029e^-5	0.393	UTR_3_PRIME CG32107 DOWNSTREAM Ent3	TF binding site mE1_TFBS_kn
2L	20679639	2L_20679639_SNP [dm3] 2L_20679639_SNP [dm6]	G	A	8.033e^-5	0.393	SYNONYMOUS_CODING Cen DOWNSTREAM ik2	TF binding site mE1_TFBS_sens
2L	1874946	2L_1874946_SNP [dm3] 2L_1874946_SNP [dm6]	G	A	8.082e^-5	0.395	INTRON CG31663
3L	14586636	3L_14586636_SNP [dm3] 3L_14593536_SNP [dm6]	A	T	8.155e^-5	0.397	INTRON HGTX
2R	3516615	2R_3516615_SNP [dm3] 2R_7629110_SNP [dm6]	G	C	8.174e^-5	0.397	SPLICE_SITE_REGION CG43340 START_GAINED CG43340 UTR_5_PRIME CG43340 INTRON CG43340
2R	10588568	2R_10588568_SNP [dm3] 2R_14701063_SNP [dm6]	T	C	8.242e^-5	0.399	INTRON mspo
3L	7920387	3L_7920387_SNP [dm3] 3L_7927287_SNP [dm6]	C	T	8.305e^-5	0.401	INTRON syd
3R	7087832	3R_7087832_SNP [dm3] 3R_11262110_SNP [dm6]	A	T	8.323e^-5	0.401	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	6663949	X_6663949_SNP [dm3] X_6769916_SNP [dm6]	C	T	8.346e^-5	0.401	SYNONYMOUS_CODING CG14438	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	18142749	3L_18142749_SNP [dm3] 3L_18149649_SNP [dm6]	G	A	8.364e^-5	0.401	INTRON CG7330
2R	13563284	2R_13563284_SNP [dm3] 2R_17675779_SNP [dm6]	T	G	8.377e^-5	0.401	SYNONYMOUS_CODING Sema-1b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	9259419	2L_9259419_SNP [dm3] 2L_9259419_SNP [dm6]	C	G	8.410e^-5	0.401	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
3L	12437387	3L_12437387_SNP [dm3] 3L_12444287_SNP [dm6]	A	T	8.414e^-5	0.401	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	20255908	X_20255908_SNP [dm3] X_20384881_SNP [dm6]	A	C	8.500e^-5	0.404	UPSTREAM CR34311 INTERGENIC
2R	3537772	2R_3537772_SNP [dm3] 2R_7650267_SNP [dm6]	C	T	8.531e^-5	0.404	DOWNSTREAM CG43340 INTRON CG43340	TF binding site mE1_TFBS_sens
3L	15679158	3L_15679158_SNP [dm3] 3L_15686058_SNP [dm6]	G	T	8.560e^-5	0.404	NON_SYNONYMOUS_CODING pgant8 DOWNSTREAM CG34452
3L	18493532	3L_18493532_INS [dm3] 3L_18500432_INS [dm6]	A	AA	8.622e^-5	0.406	INTRON AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	10372198	2R_10372198_SNP [dm3] 2R_14484693_SNP [dm6]	C	A	8.690e^-5	0.408	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_zfh1
2L	12849636	2L_12849636_INS [dm3] 2L_12849636_INS [dm6]	A	AAACTGATTATAAAGTG...	8.729e^-5	0.408	INTERGENIC
2L	7124683	2L_7124683_SNP [dm3] 2L_7124683_SNP [dm6]	T	G	8.731e^-5	0.408	INTRON Pvf3	TF binding site BDTNP1_TFBS_twi
3L	18126793	3L_18126793_SNP [dm3] 3L_18133693_SNP [dm6]	C	T	8.811e^-5	0.41	INTERGENIC
3L	18126794	3L_18126794_SNP [dm3] 3L_18133694_SNP [dm6]	A	G	8.811e^-5	0.41	INTERGENIC
3L	5910602	3L_5910602_INS [dm3] 3L_5917502_INS [dm6]	GA	ATTCTTT	8.857e^-5	0.41	UTR_3_PRIME CG13288 UPSTREAM CR45167 DOWNSTREAM CG10483
3L	13843322	3L_13843322_SNP [dm3] 3L_13850222_SNP [dm6]	G	A	8.859e^-5	0.41	SYNONYMOUS_CODING Hml
3L	15693222	3L_15693222_SNP [dm3] 3L_15700122_SNP [dm6]	C	A	8.939e^-5	0.412	UPSTREAM comm2 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	7547140	3L_7547140_SNP [dm3] 3L_7554040_SNP [dm6]	G	T	8.945e^-5	0.412	INTERGENIC
2L	11338401	2L_11338401_SNP [dm3] 2L_11338401_SNP [dm6]	T	C	8.994e^-5	0.412	DOWNSTREAM CR44585 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
2R	18716054	2R_18716054_SNP [dm3] 2R_22828531_SNP [dm6]	A	G	9.030e^-5	0.412	SYNONYMOUS_CODING CG42284 UTR_3_PRIME CG30274
2R	12105846	2R_12105846_SNP [dm3] 2R_16218341_SNP [dm6]	C	A	9.045e^-5	0.412	INTRON mrj	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	2797894	3R_2797894_DEL [dm3] 3R_6972172_DEL [dm6]	AA	A	9.052e^-5	0.412	INTRON Antp	TF binding site mE1_TFBS_D mE1_TFBS_HSA
3L	9046729	3L_9046729_SNP [dm3] 3L_9053629_SNP [dm6]	A	G	9.074e^-5	0.412	UPSTREAM Argk INTRON Argk	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	17150792	2R_17150792_SNP [dm3] 2R_21263287_SNP [dm6]	G	A	9.086e^-5	0.412	INTRON Rgk3
3R	7087714	3R_7087714_SNP [dm3] 3R_11261992_SNP [dm6]	T	A	9.122e^-5	0.412	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	12849653	2L_12849653_SNP [dm3] 2L_12849653_SNP [dm6]	G	T	9.126e^-5	0.412	INTERGENIC
3L	18119079	3L_18119079_SNP [dm3] 3L_18125979_SNP [dm6]	C	T	9.187e^-5	0.414	INTERGENIC
3L	6939536	3L_6939536_SNP [dm3] 3L_6946436_SNP [dm6]	G	T	9.219e^-5	0.414	SYNONYMOUS_CODING tow
2L	7774579	2L_7774579_SNP [dm3] 2L_7774579_SNP [dm6]	T	G	9.226e^-5	0.414	UTR_3_PRIME CG7191
3L	15700929	3L_15700929_SNP [dm3] 3L_15707829_SNP [dm6]	C	T	9.251e^-5	0.414	INTERGENIC
2R	10508071	2R_10508071_SNP [dm3] 2R_14620566_SNP [dm6]	G	T	9.310e^-5	0.414	DOWNSTREAM Sec61beta INTRON CG12863	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
2R	15893974	2R_15893974_SNP [dm3] 2R_20006469_SNP [dm6]	T	A	9.313e^-5	0.414	UPSTREAM CR44628 INTERGENIC
2L	9297060	2L_9297060_DEL [dm3] 2L_9297060_DEL [dm6]	CC	C	9.323e^-5	0.414	UTR_3_PRIME Ggamma30A
2L	9258668	2L_9258668_SNP [dm3] 2L_9258668_SNP [dm6]	C	T	9.326e^-5	0.414	INTRON Ggamma30A
3L	18126770	3L_18126770_SNP [dm3] 3L_18133670_SNP [dm6]	A	C	9.391e^-5	0.415	UPSTREAM Cyp312a1 INTERGENIC
3L	15726239	3L_15726239_SNP [dm3] 3L_15733139_SNP [dm6]	T	A	9.436e^-5	0.416	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2R	3516574	2R_3516574_SNP [dm3] 2R_7629069_SNP [dm6]	G	A	9.494e^-5	0.418	UTR_5_PRIME CG43340 INTRON CG43340
X	9824862	X_9824862_SNP [dm3] X_9930829_SNP [dm6]	T	C	9.507e^-5	0.418	UPSTREAM snoRNA:Me28S-U1688 INTRON Idgf4	TF binding site mE1_TFBS_Trl
3R	12896165	3R_12896165_SNP [dm3] 3R_17070443_SNP [dm6]	G	T	9.607e^-5	0.421	DOWNSTREAM Ns1 & 1 other INTERGENIC
3R	25403362	3R_25403362_SNP [dm3] 3R_29577640_SNP [dm6]	T	A	9.643e^-5	0.422	INTERGENIC
3L	12091990	3L_12091990_INS [dm3] 3L_12098890_INS [dm6]	C	CC	9.698e^-5	0.423	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	8383454	3R_8383454_SNP [dm3] 3R_12557732_SNP [dm6]	G	T	9.730e^-5	0.423	INTRON Octbeta2R
3L	18136765	3L_18136765_SNP [dm3] 3L_18143665_SNP [dm6]	A	C	9.766e^-5	0.423	NON_SYNONYMOUS_CODING gk
2R	8563107	2R_8563107_SNP [dm3] 2R_12675602_SNP [dm6]	T	A	9.777e^-5	0.423	UPSTREAM CG42708 INTRON CG42708
3L	7736506	3L_7736506_SNP [dm3] 3L_7743406_SNP [dm6]	A	T	9.785e^-5	0.423	UPSTREAM Snmp2 INTRON CG32373
2R	7306503	2R_7306503_SNP [dm3] 2R_11418998_SNP [dm6]	T	C	9.804e^-5	0.423	INTRON Drip
2L	3852722	2L_3852722_SNP [dm3] 2L_3852722_SNP [dm6]	G	T	9.852e^-5	0.424	DOWNSTREAM CR45451 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_prd
3L	8969596	3L_8969596_SNP [dm3] 3L_8976496_SNP [dm6]	A	G	9.933e^-5	0.426	SYNONYMOUS_CODING Srp68 DOWNSTREAM CG5644	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	13154467	2L_13154467_SNP [dm3] 2L_13154467_SNP [dm6]	G	A	9.964e^-5	0.426	INTERGENIC
3R	15186216	3R_15186216_SNP [dm3] 3R_19360494_SNP [dm6]	A	G	9.974e^-5	0.426	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2L	9113240	2L_9113240_SNP [dm3] 2L_9113240_SNP [dm6]	T	C	1.000e^-4	0.426	SYNONYMOUS_CODING Or30a
2L	5796624	2L_5796624_SNP [dm3] 2L_5796624_SNP [dm6]	C	A	1.001e^-4	0.426	INTRON CG9171
3L	8305279	3L_8305279_SNP [dm3] 3L_8312179_SNP [dm6]	A	T	1.009e^-4	0.427	INTRON CG7185	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	13224688	2R_13224688_SNP [dm3] 2R_17337183_SNP [dm6]	G	A	1.011e^-4	0.427	INTRON mbl
3R	7086565	3R_7086565_SNP [dm3] 3R_11260843_SNP [dm6]	A	C	1.014e^-4	0.427	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	7327835	2L_7327835_SNP [dm3] 2L_7327835_SNP [dm6]	A	T	1.016e^-4	0.427	INTERGENIC
2L	5681456	2L_5681456_SNP [dm3] 2L_5681456_SNP [dm6]	C	G	1.016e^-4	0.427	INTERGENIC
2L	20084242	2L_20084242_SNP [dm3] 2L_20084242_SNP [dm6]	A	C	1.019e^-4	0.427	INTRON neb & 1 other	TF binding site BDTNP1_TFBS_dl
3R	25854224	3R_25854224_SNP [dm3] 3R_30028502_SNP [dm6]	G	C	1.019e^-4	0.427	INTRON Axn
2R	8296384	2R_8296384_SNP [dm3] 2R_12408879_SNP [dm6]	G	C	1.022e^-4	0.427	UPSTREAM CG30050 DOWNSTREAM Cpr49Ag INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	7776735	2R_7776735_SNP [dm3] 2R_11889230_SNP [dm6]	A	G	1.025e^-4	0.427	SYNONYMOUS_CODING ERp60
2L	20661011	2L_20661011_SNP [dm3] 2L_20661011_SNP [dm6]	C	T	1.029e^-4	0.428	SYNONYMOUS_CODING CG31678	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	15676416	3L_15676416_SNP [dm3] 3L_15683316_SNP [dm6]	T	A	1.033e^-4	0.428	UTR_5_PRIME CG7579 UPSTREAM pgant8
2L	8973645	2L_8973645_SNP [dm3] 2L_8973645_SNP [dm6]	C	T	1.036e^-4	0.428	INTRON CG9541
2L	9259660	2L_9259660_SNP [dm3] 2L_9259660_SNP [dm6]	T	A	1.036e^-4	0.428	INTRON Ggamma30A
3L	7874071	3L_7874071_SNP [dm3] 3L_7880971_SNP [dm6]	G	A	1.040e^-4	0.429	INTRON CG32365
3L	18122748	3L_18122748_SNP [dm3] 3L_18129648_SNP [dm6]	G	T	1.055e^-4	0.431	UTR_3_PRIME Cyp312a1 DOWNSTREAM Cyp312a1
3R	12897707	3R_12897707_SNP [dm3] 3R_17071985_SNP [dm6]	G	C	1.058e^-4	0.431	SYNONYMOUS_CODING Ns1 UPSTREAM mRpS11	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
2R	17586441	2R_17586441_SNP [dm3] 2R_21698936_SNP [dm6]	A	C	1.064e^-4	0.431	INTRON HmgZ
X	7724119	X_7724119_SNP [dm3] X_7830086_SNP [dm6]	G	T	1.064e^-4	0.431	INTRON CG1402
X	7724133	X_7724133_DEL [dm3] X_7830100_DEL [dm6]	CATG	GT	1.064e^-4	0.431	INTRON CG1402
2L	649487	2L_649487_SNP [dm3] 2L_649487_SNP [dm6]	C	G	1.065e^-4	0.431	SYNONYMOUS_CODING ds
2L	2356282	2L_2356282_DEL [dm3] 2L_2356282_DEL [dm6]	CAATGCAGC	C	1.067e^-4	0.431	INTRON CG9967 & 1 other
3L	10255251	3L_10255251_SNP [dm3] 3L_10262151_SNP [dm6]	C	T	1.072e^-4	0.431	INTERGENIC
2L	7971554	2L_7971554_SNP [dm3] 2L_7971554_SNP [dm6]	A	T	1.072e^-4	0.431	INTRON Snoo
X	7724130	X_7724130_SNP [dm3] X_7830097_SNP [dm6]	T	G	1.073e^-4	0.431	INTRON CG1402
2R	3533900	2R_3533900_SNP [dm3] 2R_7646395_SNP [dm6]	A	T	1.075e^-4	0.431	SYNONYMOUS_CODING CG43340 INTRON CG43340
3L	14189705	3L_14189705_SNP [dm3] 3L_14196605_SNP [dm6]	G	A	1.076e^-4	0.431	INTRON nuf	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3L	18107306	3L_18107306_SNP [dm3] 3L_18114206_SNP [dm6]	T	C	1.077e^-4	0.431	UPSTREAM CG32195 INTRON CG32195 & 1 other
3L	18127474	3L_18127474_SNP [dm3] 3L_18134374_SNP [dm6]	C	A	1.077e^-4	0.431	INTERGENIC
2L	21039302	2L_21039302_SNP [dm3] 2L_21039302_SNP [dm6]	C	T	1.079e^-4	0.431	INTRON CG42238	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
X	6665145	X_6665145_SNP [dm3] X_6771112_SNP [dm6]	T	G	1.083e^-4	0.431	UPSTREAM COQ7 DOWNSTREAM shf & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt
2R	12635348	2R_12635348_SNP [dm3] 2R_16747843_SNP [dm6]	A	C	1.094e^-4	0.432	UTR_3_PRIME Acp53C14a DOWNSTREAM Acp53C14a & 1 other
2R	7776744	2R_7776744_SNP [dm3] 2R_11889239_SNP [dm6]	C	A	1.095e^-4	0.432	SYNONYMOUS_CODING ERp60
3L	12451290	3L_12451290_SNP [dm3] 3L_12458190_SNP [dm6]	C	T	1.096e^-4	0.432	INTERGENIC
2L	9253293	2L_9253293_SNP [dm3] 2L_9253293_SNP [dm6]	C	G	1.096e^-4	0.432	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	10578309	2R_10578309_SNP [dm3] 2R_14690804_SNP [dm6]	C	A	1.097e^-4	0.432	INTRON mspo
3L	15693867	3L_15693867_SNP [dm3] 3L_15700767_SNP [dm6]	G	A	1.106e^-4	0.433	UPSTREAM comm2 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Trl
2R	17150791	2R_17150791_SNP [dm3] 2R_21263286_SNP [dm6]	A	G	1.107e^-4	0.433	INTRON Rgk3
2R	3520137	2R_3520137_SNP [dm3] 2R_7632632_SNP [dm6]	G	T	1.109e^-4	0.433	UPSTREAM CG43341 INTRON CG43340 EXON CR45131	TF binding site mE1_TFBS_chinmo mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	15826834	2L_15826834_SNP [dm3] 2L_15826834_SNP [dm6]	T	C	1.111e^-4	0.433	INTERGENIC
3L	15509209	3L_15509209_SNP [dm3] 3L_15516109_SNP [dm6]	A	G	1.111e^-4	0.433	DOWNSTREAM CG13454 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Kr
2L	21613961	2L_21613961_SNP [dm3] 2L_21613961_SNP [dm6]	T	G	1.115e^-4	0.433	DOWNSTREAM CG2201 INTERGENIC	transposable element FlyBase
3L	778184	3L_778184_SNP [dm3] 3L_778184_SNP [dm6]	T	G	1.116e^-4	0.433	INTERGENIC
2L	13041185	2L_13041185_SNP [dm3] 2L_13041185_SNP [dm6]	G	A	1.119e^-4	0.434	INTRON CG9932
2L	20679909	2L_20679909_SNP [dm3] 2L_20679909_SNP [dm6]	C	T	1.123e^-4	0.434	SYNONYMOUS_CODING Cen DOWNSTREAM ik2	TF binding site mE1_TFBS_sens
2L	19242395	2L_19242395_SNP [dm3] 2L_19242395_SNP [dm6]	A	T	1.123e^-4	0.434	INTERGENIC
2L	14362757	2L_14362757_SNP [dm3] 2L_14362757_SNP [dm6]	C	G	1.135e^-4	0.437	SYNONYMOUS_CODING spel1	TF binding site BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	10136357	2L_10136357_SNP [dm3] 2L_10136357_SNP [dm6]	G	A	1.136e^-4	0.437	INTRON CG44153
2R	13141080	2R_13141080_SNP [dm3] 2R_17253575_SNP [dm6]	A	G	1.139e^-4	0.437	DOWNSTREAM CR43660 INTRON mbl	TF binding site BDTNP1_TFBS_twi
X	15068971	X_15068971_SNP [dm3] X_15174938_SNP [dm6]	T	A	1.143e^-4	0.437	UPSTREAM CG43737 INTERGENIC
2R	18382582	2R_18382582_SNP [dm3] 2R_22495077_SNP [dm6]	G	A	1.147e^-4	0.438	UTR_3_PRIME px DOWNSTREAM CG4610
X	15069068	X_15069068_SNP [dm3] X_15175035_SNP [dm6]	G	C	1.151e^-4	0.438	UPSTREAM CG43737 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	14408621	3R_14408621_SNP [dm3] 3R_18582899_SNP [dm6]	A	G	1.152e^-4	0.438	INTRON fray & 1 other	TF binding site BDTNP1_TFBS_dl
3L	15687647	3L_15687647_SNP [dm3] 3L_15694547_SNP [dm6]	T	G	1.164e^-4	0.44	INTERGENIC
2R	3172293	2R_3172293_SNP [dm3] 2R_7284788_SNP [dm6]	A	C	1.168e^-4	0.44	INTRON pwn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	7088145	3R_7088145_SNP [dm3] 3R_11262423_SNP [dm6]	A	G	1.170e^-4	0.44	INTERGENIC
3L	12451219	3L_12451219_SNP [dm3] 3L_12458119_SNP [dm6]	C	T	1.171e^-4	0.44	INTERGENIC
3L	12452277	3L_12452277_SNP [dm3] 3L_12459177_SNP [dm6]	G	T	1.171e^-4	0.44	INTERGENIC
X	5372467	X_5372467_SNP [dm3] X_5478434_SNP [dm6]	T	C	1.171e^-4	0.44	INTRON SPR	TF binding site BDTNP1_TFBS_twi
3L	12483738	3L_12483738_SNP [dm3] 3L_12490638_SNP [dm6]	G	A	1.184e^-4	0.442	UTR_5_PRIME CG10660 UPSTREAM CG10660 EXON CR45681	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	10508075	2R_10508075_SNP [dm3] 2R_14620570_SNP [dm6]	A	T	1.186e^-4	0.442	DOWNSTREAM Sec61beta INTRON CG12863	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
X	7724131	X_7724131_SNP [dm3] X_7830098_SNP [dm6]	T	A	1.186e^-4	0.442	INTRON CG1402
3R	25461261	3R_25461261_SNP [dm3] 3R_29635539_SNP [dm6]	C	A	1.187e^-4	0.442	INTRON Dop1R2
2R	7776743	2R_7776743_SNP [dm3] 2R_11889238_SNP [dm6]	A	G	1.188e^-4	0.442	SYNONYMOUS_CODING ERp60
2R	17999604	2R_17999604_SNP [dm3] 2R_22112099_SNP [dm6]	T	C	1.193e^-4	0.443	SYNONYMOUS_CODING Vrp1
3R	7008704	3R_7008704_SNP [dm3] 3R_11182982_SNP [dm6]	C	G	1.197e^-4	0.444	INTERGENIC
3L	12451199	3L_12451199_SNP [dm3] 3L_12458099_SNP [dm6]	G	A	1.204e^-4	0.445	INTERGENIC
2R	13258396	2R_13258396_INS [dm3] 2R_17370891_INS [dm6]	C	CC	1.213e^-4	0.446	INTRON mbl
2L	2907347	2L_2907347_SNP [dm3] 2L_2907347_SNP [dm6]	A	T	1.214e^-4	0.446	INTRON lilli	TF binding site mE1_TFBS_bab1
3R	11539744	3R_11539744_SNP [dm3] 3R_15714022_SNP [dm6]	A	G	1.217e^-4	0.446	INTERGENIC
2R	11904567	2R_11904567_SNP [dm3] 2R_16017062_SNP [dm6]	G	T	1.219e^-4	0.446	NON_SYNONYMOUS_CODING CG8397 UPSTREAM CG8399
2L	9106101	2L_9106101_SNP [dm3] 2L_9106101_SNP [dm6]	T	C	1.220e^-4	0.446	INTERGENIC
2L	8973606	2L_8973606_SNP [dm3] 2L_8973606_SNP [dm6]	A	T	1.221e^-4	0.446	INTRON CG9541
2R	10505737	2R_10505737_SNP [dm3] 2R_14618232_SNP [dm6]	A	T	1.222e^-4	0.446	UPSTREAM Sec61beta & 1 other INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3L	18143626	3L_18143626_SNP [dm3] 3L_18150526_SNP [dm6]	C	T	1.224e^-4	0.446	INTRON CG7330
2L	7777335	2L_7777335_SNP [dm3] 2L_7777335_SNP [dm6]	T	C	1.232e^-4	0.447	SYNONYMOUS_CODING CG7179	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	17923262	2L_17923262_SNP [dm3] 2L_17923262_SNP [dm6]	G	C	1.242e^-4	0.447	INTERGENIC
2R	17839804	2R_17839804_SNP [dm3] 2R_21952299_SNP [dm6]	T	A	1.242e^-4	0.447	SYNONYMOUS_CODING CG13488
3R	12336692	3R_12336692_SNP [dm3] 3R_16510970_SNP [dm6]	G	C	1.242e^-4	0.447	INTRON CG42342
3L	12451847	3L_12451847_SNP [dm3] 3L_12458747_SNP [dm6]	T	G	1.243e^-4	0.447	INTERGENIC
3L	18138860	3L_18138860_SNP [dm3] 3L_18145760_SNP [dm6]	T	C	1.246e^-4	0.447	DOWNSTREAM gk INTERGENIC
2R	12370458	2R_12370458_SNP [dm3] 2R_16482953_SNP [dm6]	G	T	1.247e^-4	0.447	INTERGENIC
3L	4648818	3L_4648818_SNP [dm3] 3L_4648818_SNP [dm6]	G	T	1.248e^-4	0.447	SYNONYMOUS_CODING CG32238 INTRON axo	TF binding site BDTNP1_TFBS_prd
X	6905974	X_6905974_SNP [dm3] X_7011941_SNP [dm6]	G	A	1.250e^-4	0.447	SYNONYMOUS_CODING CG42308 UTR_3_PRIME CG32736 UPSTREAM cm DOWNSTREAM CG3032	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	20532452	X_20532452_SNP [dm3] X_20661425_SNP [dm6]	G	A	1.258e^-4	0.448	UTR_3_PRIME Cyp6v1 UPSTREAM CG1835 DOWNSTREAM Cyp6v1
2L	7150711	2L_7150711_SNP [dm3] 2L_7150711_SNP [dm6]	G	A	1.258e^-4	0.448	INTRON Pvf3
2L	777785	2L_777785_SNP [dm3] 2L_777785_SNP [dm6]	G	A	1.272e^-4	0.452	DOWNSTREAM CG13946 INTERGENIC	TF binding site mE1_TFBS_inv
2L	13808194	2L_13808194_SNP [dm3] 2L_13808194_SNP [dm6]	A	T	1.272e^-4	0.452	DOWNSTREAM adat INTRON CAH1
2L	20563024	2L_20563024_SNP [dm3] 2L_20563024_SNP [dm6]	T	C	1.288e^-4	0.455	DOWNSTREAM mir-4973 INTRON CR45347
3R	12315672	3R_12315672_SNP [dm3] 3R_16489950_SNP [dm6]	T	C	1.290e^-4	0.455	SYNONYMOUS_CODING Cad89D	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	3516388	2R_3516388_DEL [dm3] 2R_7628883_DEL [dm6]	TCAGTTTGTTGTATGTTTT...	AACATAC	1.290e^-4	0.455	UTR_5_PRIME CG43340 INTRON CG43340
2R	10756792	2R_10756792_SNP [dm3] 2R_14869287_SNP [dm6]	T	C	1.292e^-4	0.455	DOWNSTREAM Inr-a INTRON Inr-a
3R	23548389	3R_23548389_SNP [dm3] 3R_27722667_SNP [dm6]	G	A	1.297e^-4	0.455	INTERGENIC
2R	5971572	2R_5971572_SNP [dm3] 2R_10084067_SNP [dm6]	A	T	1.298e^-4	0.455	UTR_3_PRIME egr
2R	19728527	2R_19728527_SNP [dm3] 2R_23841004_SNP [dm6]	A	T	1.299e^-4	0.455	UPSTREAM snoRNA:Psi18S-176 DOWNSTREAM shu & 1 other INTERGENIC
2R	3813997	2R_3813997_SNP [dm3] 2R_7926492_SNP [dm6]	A	T	1.300e^-4	0.455	UPSTREAM CG8791 INTERGENIC
3L	583263	3L_583263_SNP [dm3] 3L_583263_SNP [dm6]	T	C	1.312e^-4	0.458	UTR_3_PRIME Kah DOWNSTREAM Ppm1	TF binding site BDTNP1_TFBS_twi
2L	10620125	2L_10620125_SNP [dm3] 2L_10620125_SNP [dm6]	C	T	1.314e^-4	0.458	SYNONYMOUS_CODING Trim9
3L	9133930	3L_9133930_SNP [dm3] 3L_9140830_SNP [dm6]	A	T	1.322e^-4	0.46	INTRON nwk	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10372133	2R_10372133_SNP [dm3] 2R_14484628_SNP [dm6]	T	A	1.339e^-4	0.464	INTRON L	TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1
3L	18493614	3L_18493614_SNP [dm3] 3L_18500514_SNP [dm6]	T	G	1.344e^-4	0.464	INTRON AstC-R2
2R	11904523	2R_11904523_SNP [dm3] 2R_16017018_SNP [dm6]	G	T	1.352e^-4	0.464	STOP_GAINED CG8397 UPSTREAM CG8399 DOWNSTREAM Rrp42	TF binding site mE1_TFBS_HSA
2L	10020443	2L_10020443_SNP [dm3] 2L_10020443_SNP [dm6]	C	T	1.353e^-4	0.464	INTERGENIC
3L	14362126	3L_14362126_SNP [dm3] 3L_14369026_SNP [dm6]	A	C	1.353e^-4	0.464	UTR_3_PRIME CG13481 DOWNSTREAM fz
2L	12445302	2L_12445302_SNP [dm3] 2L_12445302_SNP [dm6]	G	C	1.357e^-4	0.464	DOWNSTREAM CG5421 INTRON Oatp33Ea	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	12316095	3R_12316095_SNP [dm3] 3R_16490373_SNP [dm6]	A	G	1.359e^-4	0.464	SYNONYMOUS_CODING Cad89D	TF binding site mE1_TFBS_cad
2R	10709770	2R_10709770_SNP [dm3] 2R_14822265_SNP [dm6]	C	T	1.360e^-4	0.464	INTERGENIC
2L	5749680	2L_5749680_SNP [dm3] 2L_5749680_SNP [dm6]	C	A	1.362e^-4	0.464	INTRON CG11030	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3L	4662940	3L_4662940_DEL [dm3] 3L_4662940_DEL [dm6]	CGC	C	1.362e^-4	0.464	INTRON axo
3L	12437902	3L_12437902_SNP [dm3] 3L_12444802_SNP [dm6]	T	C	1.363e^-4	0.464	INTERGENIC
3L	18125168	3L_18125168_SNP [dm3] 3L_18132068_SNP [dm6]	G	T	1.364e^-4	0.464	UTR_5_PRIME Cyp312a1
3L	12438312	3L_12438312_INS [dm3] 3L_12445212_INS [dm6]	A	AGTTTTAAGGA...	1.370e^-4	0.465	INTERGENIC
2R	17792841	2R_17792841_SNP [dm3] 2R_21905336_SNP [dm6]	G	T	1.374e^-4	0.465	INTRON Fili
3L	13845469	3L_13845469_SNP [dm3] 3L_13852369_SNP [dm6]	C	T	1.374e^-4	0.465	SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7946021	3L_7946021_SNP [dm3] 3L_7952921_SNP [dm6]	T	A	1.379e^-4	0.466	INTERGENIC	TF binding site mE1_TFBS_cad
X	20287032	X_20287032_SNP [dm3] X_20416005_SNP [dm6]	C	T	1.385e^-4	0.466	SYNONYMOUS_CODING Obp19a UPSTREAM Obp19b	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	12893634	3R_12893634_SNP [dm3] 3R_17067912_SNP [dm6]	G	A	1.391e^-4	0.466	INTRON Dad	TF binding site BDTNP1_TFBS_Med
2R	7946874	2R_7946874_SNP [dm3] 2R_12059369_SNP [dm6]	T	C	1.393e^-4	0.466	INTRON Drep-3
3L	1290322	3L_1290322_SNP [dm3] 3L_1290322_SNP [dm6]	A	G	1.398e^-4	0.466	SYNONYMOUS_CODING CG32333	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	16359385	2L_16359385_SNP [dm3] 2L_16359385_SNP [dm6]	C	T	1.403e^-4	0.466	INTERGENIC
2L	21117673	2L_21117673_DEL [dm3] 2L_21117673_DEL [dm6]	AA	T	1.405e^-4	0.466	INTRON Nhe2
2R	15159014	2R_15159014_SNP [dm3] 2R_19271509_SNP [dm6]	G	T	1.408e^-4	0.466	INTRON rib	enhancer mE1_CBP_Enhancers TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad
2L	16381250	2L_16381250_SNP [dm3] 2L_16381250_SNP [dm6]	A	C	1.412e^-4	0.466	INTERGENIC
2R	8441280	2R_8441280_SNP [dm3] 2R_12553775_SNP [dm6]	T	C	1.418e^-4	0.466	INTRON fra
3R	4536307	3R_4536307_SNP [dm3] 3R_8710585_SNP [dm6]	T	A	1.420e^-4	0.466	INTERGENIC
3L	19896299	3L_19896299_SNP [dm3] 3L_19903199_SNP [dm6]	G	A	1.422e^-4	0.466	INTRON Mi-2 & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	9824922	X_9824922_INS [dm3] X_9930889_INS [dm6]	A	ATTATA	1.423e^-4	0.466	UTR_5_PRIME Idgf4 UPSTREAM snoRNA:Me28S-U1688 INTRON Idgf4	TF binding site mE1_TFBS_Trl
3R	2229349	3R_2229349_SNP [dm3] 3R_6403627_SNP [dm6]	A	G	1.424e^-4	0.466	INTRON Dmtn	TF binding site mE1_TFBS_cad mE1_TFBS_Trl
X	6663639	X_6663639_SNP [dm3] X_6769606_SNP [dm6]	A	G	1.425e^-4	0.466	NON_SYNONYMOUS_CODING CG14438	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	15069070	X_15069070_SNP [dm3] X_15175037_SNP [dm6]	C	A	1.425e^-4	0.466	UPSTREAM CG43737 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	7777344	2L_7777344_SNP [dm3] 2L_7777344_SNP [dm6]	A	G	1.426e^-4	0.466	SYNONYMOUS_CODING CG7179	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	9259491	2L_9259491_SNP [dm3] 2L_9259491_SNP [dm6]	G	C	1.432e^-4	0.466	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2R	3815828	2R_3815828_SNP [dm3] 2R_7928323_SNP [dm6]	C	A	1.433e^-4	0.466	INTRON CG8791	TF binding site mE1_TFBS_cad
2R	17947599	2R_17947599_SNP [dm3] 2R_22060094_SNP [dm6]	A	T	1.437e^-4	0.466	UPSTREAM Snp INTRON CG13501	TF binding site BDTNP1_TFBS_dl
3R	7008705	3R_7008705_SNP [dm3] 3R_11182983_SNP [dm6]	T	A	1.440e^-4	0.466	INTERGENIC
2R	12635359	2R_12635359_SNP [dm3] 2R_16747854_SNP [dm6]	T	C	1.442e^-4	0.466	UTR_3_PRIME Acp53C14a DOWNSTREAM Acp53C14a & 1 other
3R	15186305	3R_15186305_DEL [dm3] 3R_19360583_DEL [dm6]	AAAAG	T	1.444e^-4	0.466	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	3882332	2L_3882332_SNP [dm3] 2L_3882332_SNP [dm6]	A	G	1.444e^-4	0.466	INTRON capu
X	6905980	X_6905980_SNP [dm3] X_7011947_SNP [dm6]	C	T	1.450e^-4	0.466	SYNONYMOUS_CODING CG42308 UTR_3_PRIME CG32736 UPSTREAM cm DOWNSTREAM CG3032	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2R	10372142	2R_10372142_SNP [dm3] 2R_14484637_SNP [dm6]	G	A	1.451e^-4	0.466	INTRON L	TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1
4	845181	4_845181_SNP [dm3] 4_824555_SNP [dm6]	G	T	1.457e^-4	0.466	INTRON Sox102F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
2R	12251727	2R_12251727_SNP [dm3] 2R_16364222_SNP [dm6]	A	G	1.458e^-4	0.466	UTR_5_PRIME CG15711 DOWNSTREAM CG6262
X	11282042	X_11282042_SNP [dm3] X_11388009_SNP [dm6]	T	C	1.460e^-4	0.466	SYNONYMOUS_CODING dlg1 INTRON dlg1
2L	915014	2L_915014_SNP [dm3] 2L_915014_SNP [dm6]	G	T	1.464e^-4	0.466	INTRON GluRIIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	7969038	2L_7969038_SNP [dm3] 2L_7969038_SNP [dm6]	C	T	1.464e^-4	0.466	INTRON Snoo
3L	18315722	3L_18315722_SNP [dm3] 3L_18322622_SNP [dm6]	T	A	1.465e^-4	0.466	INTERGENIC
X	10265108	X_10265108_SNP [dm3] X_10371075_SNP [dm6]	G	T	1.465e^-4	0.466	DOWNSTREAM CG32686 INTRON CG17841
2L	8034210	2L_8034210_SNP [dm3] 2L_8034210_SNP [dm6]	G	T	1.467e^-4	0.466	INTRON CG7367 & 1 other
3R	23767634	3R_23767634_SNP [dm3] 3R_27941912_SNP [dm6]	C	T	1.468e^-4	0.466	NON_SYNONYMOUS_CODING CG5514 DOWNSTREAM mfrn	TF binding site mE1_TFBS_HSA
X	16661381	X_16661381_SNP [dm3] X_16767348_SNP [dm6]	A	T	1.469e^-4	0.466	INTRON if
3L	12092254	3L_12092254_SNP [dm3] 3L_12099154_SNP [dm6]	C	A	1.470e^-4	0.466	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10588650	2R_10588650_SNP [dm3] 2R_14701145_SNP [dm6]	A	T	1.474e^-4	0.466	INTRON mspo
3L	16429749	3L_16429749_SNP [dm3] 3L_16436649_SNP [dm6]	C	T	1.474e^-4	0.466	INTRON CG33158 & 1 other	TF binding site mE1_TFBS_inv
2L	6608525	2L_6608525_SNP [dm3] 2L_6608525_SNP [dm6]	T	A	1.475e^-4	0.466	INTERGENIC
3L	14229953	3L_14229953_SNP [dm3] 3L_14236853_SNP [dm6]	A	T	1.479e^-4	0.466	UPSTREAM CG34244 INTRON CG7906	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	11897815	3L_11897815_DEL [dm3] 3L_11904715_DEL [dm6]	ATGTACTA	A	1.481e^-4	0.466	INTRON CG44837
3R	19196665	3R_19196665_SNP [dm3] 3R_23370943_SNP [dm6]	T	G	1.482e^-4	0.466	INTERGENIC
3L	18253546	3L_18253546_DEL [dm3] 3L_18260446_DEL [dm6]	TATACATC	T	1.491e^-4	0.467	INTERGENIC	TF binding site BDTNP1_TFBS_hb
3L	15686453	3L_15686453_SNP [dm3] 3L_15693353_SNP [dm6]	G	A	1.493e^-4	0.467	INTERGENIC	silencer mE1_HDAC_PRE
2R	14991622	2R_14991622_SNP [dm3] 2R_19104117_SNP [dm6]	T	A	1.494e^-4	0.467	INTRON 5-HT1A
2R	19026045	2R_19026045_SNP [dm3] 2R_23138522_SNP [dm6]	G	A	1.523e^-4	0.475	UPSTREAM CG30192 DOWNSTREAM CG13544 INTERGENIC
2R	8534699	2R_8534699_DEL [dm3] 2R_12647194_DEL [dm6]	AC	G	1.534e^-4	0.476	INTRON CG8785
3L	6762146	3L_6762146_SNP [dm3] 3L_6769046_SNP [dm6]	C	T	1.538e^-4	0.476	INTERGENIC	TF binding site mE1_TFBS_cad
3L	6762899	3L_6762899_SNP [dm3] 3L_6769799_SNP [dm6]	C	T	1.538e^-4	0.476	INTERGENIC
2R	10786122	2R_10786122_SNP [dm3] 2R_14898617_SNP [dm6]	C	A	1.541e^-4	0.476	UPSTREAM Cyp317a1 INTRON Cyp317a1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	15953934	3R_15953934_SNP [dm3] 3R_20128212_SNP [dm6]	T	C	1.547e^-4	0.476	INTERGENIC
2R	10676540	2R_10676540_SNP [dm3] 2R_14789035_SNP [dm6]	C	T	1.549e^-4	0.476	INTRON kn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	6088756	X_6088756_DEL [dm3] X_6194723_DEL [dm6]	TAAAAATATG	T	1.550e^-4	0.476	DOWNSTREAM CG32750 INTERGENIC
X	6088769	X_6088769_DEL [dm3] X_6194736_DEL [dm6]	CA	C	1.550e^-4	0.476	UTR_3_PRIME CG32750
X	14698957	X_14698957_SNP [dm3] X_14804924_SNP [dm6]	T	A	1.550e^-4	0.476	INTRON rut
3L	10255304	3L_10255304_SNP [dm3] 3L_10262204_SNP [dm6]	T	C	1.551e^-4	0.476	INTERGENIC
3L	8888743	3L_8888743_SNP [dm3] 3L_8895643_SNP [dm6]	G	T	1.553e^-4	0.476	SYNONYMOUS_CODING TrpA1
2R	10703106	2R_10703106_SNP [dm3] 2R_14815601_SNP [dm6]	G	C	1.563e^-4	0.477	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	8222957	3L_8222957_SNP [dm3] 3L_8229857_SNP [dm6]	G	C	1.564e^-4	0.477	SYNONYMOUS_CODING eIF4E-3
2R	10789037	2R_10789037_SNP [dm3] 2R_14901532_SNP [dm6]	C	T	1.569e^-4	0.477	UTR_3_PRIME Cyp317a1 & 1 other DOWNSTREAM Cyp317a1
2L	10071417	2L_10071417_SNP [dm3] 2L_10071417_SNP [dm6]	C	T	1.570e^-4	0.477	INTRON CG44153
2L	5749615	2L_5749615_SNP [dm3] 2L_5749615_SNP [dm6]	G	T	1.571e^-4	0.477	INTRON CG11030	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3L	16429751	3L_16429751_SNP [dm3] 3L_16436651_SNP [dm6]	A	G	1.574e^-4	0.477	INTRON CG33158 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	6906558	X_6906558_SNP [dm3] X_7012525_SNP [dm6]	C	T	1.577e^-4	0.477	SYNONYMOUS_CODING CG3032 DOWNSTREAM CG32736 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	11100746	2R_11100746_SNP [dm3] 2R_15213241_SNP [dm6]	G	T	1.578e^-4	0.477	SYNONYMOUS_CODING row DOWNSTREAM CG8093	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	10716148	2R_10716148_SNP [dm3] 2R_14828643_SNP [dm6]	A	G	1.584e^-4	0.478	INTERGENIC
2R	10585596	2R_10585596_SNP [dm3] 2R_14698091_SNP [dm6]	A	T	1.589e^-4	0.479	INTRON mspo
2R	10376657	2R_10376657_SNP [dm3] 2R_14489152_SNP [dm6]	C	T	1.592e^-4	0.479	INTRON L
3R	15186317	3R_15186317_SNP [dm3] 3R_19360595_SNP [dm6]	G	T	1.595e^-4	0.479	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	12888783	3L_12888783_SNP [dm3] 3L_12895683_SNP [dm6]	C	A	1.598e^-4	0.479	DOWNSTREAM CG14118 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	9527689	2R_9527689_SNP [dm3] 2R_13640184_SNP [dm6]	G	A	1.608e^-4	0.479	INTRON fas
3R	15953931	3R_15953931_SNP [dm3] 3R_20128209_SNP [dm6]	A	C	1.608e^-4	0.479	INTERGENIC
3L	12850554	3L_12850554_SNP [dm3] 3L_12857454_SNP [dm6]	T	A	1.612e^-4	0.479	UTR_3_PRIME CG32107 DOWNSTREAM Ent3	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2R	15595811	2R_15595811_SNP [dm3] 2R_19708306_SNP [dm6]	C	A	1.614e^-4	0.479	INTERGENIC
3L	16185652	3L_16185652_SNP [dm3] 3L_16192552_SNP [dm6]	C	A	1.614e^-4	0.479	INTERGENIC
3L	18111138	3L_18111138_SNP [dm3] 3L_18118038_SNP [dm6]	C	T	1.615e^-4	0.479	UTR_3_PRIME CG32195 INTRON CG7341
3R	4445901	3R_4445901_SNP [dm3] 3R_8620179_SNP [dm6]	C	A	1.616e^-4	0.479	INTRON 5-HT2B
2L	7964912	2L_7964912_SNP [dm3] 2L_7964912_SNP [dm6]	G	C	1.617e^-4	0.479	INTRON Snoo	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	10567701	2R_10567701_SNP [dm3] 2R_14680196_SNP [dm6]	A	G	1.635e^-4	0.484	INTRON mspo
2R	10537633	2R_10537633_SNP [dm3] 2R_14650128_SNP [dm6]	T	A	1.641e^-4	0.485	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	15893824	2R_15893824_SNP [dm3] 2R_20006319_SNP [dm6]	G	A	1.646e^-4	0.486	UPSTREAM CR44628 INTERGENIC
X	6088720	X_6088720_SNP [dm3] X_6194687_SNP [dm6]	A	G	1.651e^-4	0.486	DOWNSTREAM CG32750 INTERGENIC
3L	15687585	3L_15687585_SNP [dm3] 3L_15694485_SNP [dm6]	T	G	1.654e^-4	0.486	INTERGENIC
3L	16362251	3L_16362251_SNP [dm3] 3L_16369151_SNP [dm6]	C	A	1.655e^-4	0.486	NON_SYNONYMOUS_CODING CG4842 UPSTREAM CG18814
2L	19294969	2L_19294969_SNP [dm3] 2L_19294969_SNP [dm6]	T	G	1.667e^-4	0.487	INTERGENIC
3L	13843394	3L_13843394_SNP [dm3] 3L_13850294_SNP [dm6]	C	G	1.668e^-4	0.487	SYNONYMOUS_CODING Hml
2R	14991681	2R_14991681_SNP [dm3] 2R_19104176_SNP [dm6]	T	A	1.670e^-4	0.487	INTRON 5-HT1A
2R	14776561	2R_14776561_SNP [dm3] 2R_18889056_SNP [dm6]	T	C	1.677e^-4	0.487	INTRON sano
3L	13772125	3L_13772125_DEL [dm3] 3L_13779025_DEL [dm6]	AA	A	1.678e^-4	0.487	INTRON bru-3
3L	15685897	3L_15685897_SNP [dm3] 3L_15692797_SNP [dm6]	G	A	1.679e^-4	0.487	UPSTREAM CG34451 INTERGENIC
2L	1911696	2L_1911696_SNP [dm3] 2L_1911696_SNP [dm6]	A	G	1.680e^-4	0.487	UPSTREAM CG7337 INTRON CG7337	TF binding site mE1_TFBS_Trl
2R	10666546	2R_10666546_SNP [dm3] 2R_14779041_SNP [dm6]	T	C	1.681e^-4	0.487	INTRON kn
2L	1529323	2L_1529323_SNP [dm3] 2L_1529323_SNP [dm6]	G	C	1.686e^-4	0.488	INTERGENIC
3L	18138560	3L_18138560_SNP [dm3] 3L_18145460_SNP [dm6]	T	C	1.694e^-4	0.49	DOWNSTREAM gk INTERGENIC
2L	1385844	2L_1385844_SNP [dm3] 2L_1385844_SNP [dm6]	C	A	1.699e^-4	0.49	INTRON lea
3L	18103161	3L_18103161_SNP [dm3] 3L_18110061_SNP [dm6]	C	T	1.700e^-4	0.49	SYNONYMOUS_CODING mus304 UPSTREAM CG5147	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	5551272	2R_5551272_SNP [dm3] 2R_9663767_SNP [dm6]	G	T	1.705e^-4	0.49	INTRON Mmp2	TF binding site mE1_TFBS_inv
2L	17415483	2L_17415483_SNP [dm3] 2L_17415483_SNP [dm6]	T	G	1.713e^-4	0.49	UTR_3_PRIME Dif INTRON Dif	TF binding site mE1_TFBS_inv
3L	14189729	3L_14189729_SNP [dm3] 3L_14196629_SNP [dm6]	G	T	1.714e^-4	0.49	INTRON nuf	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
X	6088731	X_6088731_SNP [dm3] X_6194698_SNP [dm6]	A	T	1.717e^-4	0.49	DOWNSTREAM CG32750 INTERGENIC
2R	11446465	2R_11446465_SNP [dm3] 2R_15558960_SNP [dm6]	T	A	1.717e^-4	0.49	UPSTREAM CG12963 INTRON CG12963	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	11420896	3L_11420896_INS [dm3] 3L_11427796_INS [dm6]	A	ATGT	1.720e^-4	0.49	INTERGENIC	TF binding site BDTNP1_TFBS_z
2R	17944814	2R_17944814_SNP [dm3] 2R_22057309_SNP [dm6]	G	A	1.722e^-4	0.49	SYNONYMOUS_CODING CG13500	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	8888678	3L_8888678_SNP [dm3] 3L_8895578_SNP [dm6]	C	T	1.728e^-4	0.49	INTRON TrpA1
3L	582441	3L_582441_SNP [dm3] 3L_582441_SNP [dm6]	G	T	1.729e^-4	0.49	NON_SYNONYMOUS_CODING Ppm1 DOWNSTREAM Kah
2R	9902628	2R_9902628_SNP [dm3] 2R_14015123_SNP [dm6]	C	A	1.731e^-4	0.49	INTRON mam
X	9982206	X_9982206_SNP [dm3] X_10088173_SNP [dm6]	A	T	1.733e^-4	0.49	INTRON RhoU	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	942119	X_942119_SNP [dm3] X_1048086_SNP [dm6]	G	A	1.733e^-4	0.49	INTRON CR44779
3L	12437440	3L_12437440_SNP [dm3] 3L_12444340_SNP [dm6]	A	G	1.742e^-4	0.491	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	10568534	2R_10568534_SNP [dm3] 2R_14681029_SNP [dm6]	G	T	1.743e^-4	0.491	INTRON mspo
3L	8223044	3L_8223044_SNP [dm3] 3L_8229944_SNP [dm6]	A	T	1.743e^-4	0.491	INTRON eIF4E-3
2R	18901830	2R_18901830_SNP [dm3] 2R_23014307_SNP [dm6]	G	A	1.754e^-4	0.492	INTRON twi & 1 other	TF binding site BDTNP1_TFBS_twi
2R	10153763	2R_10153763_SNP [dm3] 2R_14266258_SNP [dm6]	A	G	1.757e^-4	0.492	INTRON CG8547
X	9651693	X_9651693_INS [dm3] X_9757660_INS [dm6]	A	AAA	1.760e^-4	0.492	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	18493526	3L_18493526_SNP [dm3] 3L_18500426_SNP [dm6]	C	T	1.763e^-4	0.492	INTRON AstC-R2	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	14075243	3L_14075243_SNP [dm3] 3L_14082143_SNP [dm6]	T	C	1.764e^-4	0.492	SYNONYMOUS_CODING btl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	9271655	2R_9271655_SNP [dm3] 2R_13384150_SNP [dm6]	A	T	1.765e^-4	0.492	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	20083866	2L_20083866_SNP [dm3] 2L_20083866_SNP [dm6]	C	T	1.766e^-4	0.492	INTRON neb & 1 other	TF binding site BDTNP1_TFBS_dl
2L	7774568	2L_7774568_INS [dm3] 2L_7774568_INS [dm6]	A	ACTA	1.773e^-4	0.493	UTR_3_PRIME CG7191
2L	1534205	2L_1534205_SNP [dm3] 2L_1534205_SNP [dm6]	C	T	1.773e^-4	0.493	INTERGENIC
3R	19196666	3R_19196666_SNP [dm3] 3R_23370944_SNP [dm6]	T	A	1.778e^-4	0.493	INTERGENIC
2L	1874960	2L_1874960_SNP [dm3] 2L_1874960_SNP [dm6]	G	C	1.783e^-4	0.493	INTRON CG31663
2R	15003203	2R_15003203_SNP [dm3] 2R_19115698_SNP [dm6]	C	T	1.790e^-4	0.493	INTRON 5-HT1A
3R	18677338	3R_18677338_SNP [dm3] 3R_22851616_SNP [dm6]	A	T	1.791e^-4	0.493	EXON CR43846	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi
2R	8318916	2R_8318916_DEL [dm3] 2R_12431411_DEL [dm6]	CTC	C	1.792e^-4	0.493	UPSTREAM Nup54 DOWNSTREAM DUBAI & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn
3L	5871296	3L_5871296_SNP [dm3] 3L_5878196_SNP [dm6]	T	C	1.793e^-4	0.493	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	20560739	2L_20560739_SNP [dm3] 2L_20560739_SNP [dm6]	G	A	1.794e^-4	0.493	INTERGENIC
X	6905972	X_6905972_SNP [dm3] X_7011939_SNP [dm6]	C	T	1.800e^-4	0.493	SYNONYMOUS_CODING CG42308 UTR_3_PRIME CG32736 UPSTREAM cm DOWNSTREAM CG3032	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	6088714	X_6088714_SNP [dm3] X_6194681_SNP [dm6]	A	T	1.802e^-4	0.493	DOWNSTREAM CG32750 INTERGENIC
2R	19728536	2R_19728536_INS [dm3] 2R_23841013_INS [dm6]	A	AACTGGTTCAACCAGGACTT...	1.802e^-4	0.493	UPSTREAM snoRNA:Psi18S-176 DOWNSTREAM shu & 1 other INTERGENIC
2R	10714656	2R_10714656_SNP [dm3] 2R_14827151_SNP [dm6]	G	C	1.805e^-4	0.493	INTERGENIC
3L	8818449	3L_8818449_SNP [dm3] 3L_8825349_SNP [dm6]	G	T	1.808e^-4	0.493	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2R	10585592	2R_10585592_SNP [dm3] 2R_14698087_SNP [dm6]	T	A	1.812e^-4	0.494	INTRON mspo
3L	16429752	3L_16429752_SNP [dm3] 3L_16436652_SNP [dm6]	A	C	1.815e^-4	0.494	INTRON CG33158 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	15688841	3L_15688841_SNP [dm3] 3L_15695741_SNP [dm6]	G	T	1.823e^-4	0.495	INTERGENIC
3R	7087690	3R_7087690_SNP [dm3] 3R_11261968_SNP [dm6]	A	T	1.826e^-4	0.495	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	15698435	3L_15698435_SNP [dm3] 3L_15705335_SNP [dm6]	C	A	1.830e^-4	0.495	INTERGENIC	TF binding site mE1_TFBS_cad
3L	8818589	3L_8818589_SNP [dm3] 3L_8825489_SNP [dm6]	G	C	1.833e^-4	0.495	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
3L	14358580	3L_14358580_INS [dm3] 3L_14365480_INS [dm6]	T	TGT	1.834e^-4	0.495	INTRON fz	TF binding site BDTNP1_TFBS_dl
2R	17945133	2R_17945133_SNP [dm3] 2R_22057628_SNP [dm6]	C	A	1.835e^-4	0.495	SYNONYMOUS_CODING CG13500	TF binding site mE1_TFBS_cad
2R	16833986	2R_16833986_SNP [dm3] 2R_20946481_SNP [dm6]	C	T	1.836e^-4	0.495	DOWNSTREAM snoRNA:660 & 1 other INTERGENIC
2L	18995337	2L_18995337_SNP [dm3] 2L_18995337_SNP [dm6]	C	T	1.840e^-4	0.495	INTRON CG10650	transposable element FlyBase
2R	11100274	2R_11100274_SNP [dm3] 2R_15212769_SNP [dm6]	G	A	1.844e^-4	0.495	NON_SYNONYMOUS_CODING row	TF binding site BDTNP1_TFBS_dl
3L	12439057	3L_12439057_SNP [dm3] 3L_12445957_SNP [dm6]	A	G	1.849e^-4	0.495	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	18118944	3L_18118944_SNP [dm3] 3L_18125844_SNP [dm6]	G	T	1.850e^-4	0.495	INTERGENIC
2L	14410113	2L_14410113_SNP [dm3] 2L_14410113_SNP [dm6]	T	C	1.854e^-4	0.495	UPSTREAM elB DOWNSTREAM CR44733 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_Trl
3L	18133195	3L_18133195_INS [dm3] 3L_18140095_INS [dm6]	T	AAA	1.857e^-4	0.495	INTRON gk	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	1431270	2L_1431270_SNP [dm3] 2L_1431270_SNP [dm6]	C	T	1.860e^-4	0.495	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	16715575	2L_16715575_SNP [dm3] 2L_16715575_SNP [dm6]	A	G	1.860e^-4	0.495	UPSTREAM Cyt-c-d INTRON CG31808	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	12457128	2R_12457128_SNP [dm3] 2R_16569623_SNP [dm6]	A	G	1.862e^-4	0.495	SYNONYMOUS_CODING CG4945 DOWNSTREAM RpS15 INTRON CG4945	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	8517338	2R_8517338_SNP [dm3] 2R_12629833_SNP [dm6]	G	C	1.872e^-4	0.497	SYNONYMOUS_CODING muskelin
X	20530078	X_20530078_SNP [dm3] X_20659051_SNP [dm6]	T	G	1.877e^-4	0.498	INTRON Cyp6v1	TF binding site BDTNP1_TFBS_da mE1_TFBS_chinmo
X	20258831	X_20258831_SNP [dm3] X_20387804_SNP [dm6]	G	T	1.883e^-4	0.499	INTERGENIC
2L	7121434	2L_7121434_SNP [dm3] 2L_7121434_SNP [dm6]	G	A	1.887e^-4	0.499	INTRON Pvf3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_Trl
2R	15893829	2R_15893829_SNP [dm3] 2R_20006324_SNP [dm6]	G	A	1.889e^-4	0.499	UPSTREAM CR44628 INTERGENIC
3R	2801282	3R_2801282_SNP [dm3] 3R_6975560_SNP [dm6]	G	A	1.898e^-4	0.501	INTRON Antp	TF binding site BDTNP1_TFBS_dl
2R	13075547	2R_13075547_SNP [dm3] 2R_17188042_SNP [dm6]	C	A	1.903e^-4	0.501	UPSTREAM CR44388 DOWNSTREAM CR44389 INTERGENIC
3L	9133885	3L_9133885_SNP [dm3] 3L_9140785_SNP [dm6]	T	C	1.907e^-4	0.502	SYNONYMOUS_CODING nwk	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	14229960	3L_14229960_SNP [dm3] 3L_14236860_SNP [dm6]	G	T	1.912e^-4	0.502	UPSTREAM CG34244 INTRON CG7906	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	15041837	3R_15041837_SNP [dm3] 3R_19216115_SNP [dm6]	C	T	1.917e^-4	0.502	UTR_3_PRIME vib DOWNSTREAM cry
2L	6501623	2L_6501623_SNP [dm3] 2L_6501623_SNP [dm6]	G	A	1.918e^-4	0.502	INTRON CG31637	TF binding site mE1_TFBS_sens
3L	8818529	3L_8818529_INS [dm3] 3L_8825429_INS [dm6]	A	ATACA	1.927e^-4	0.504	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
2R	18392540	2R_18392540_SNP [dm3] 2R_22505035_SNP [dm6]	C	A	1.930e^-4	0.504	INTRON px	TF binding site BDTNP1_TFBS_twi
2L	19294968	2L_19294968_SNP [dm3] 2L_19294968_SNP [dm6]	A	C	1.930e^-4	0.504	INTERGENIC
2L	16508055	2L_16508055_SNP [dm3] 2L_16508055_SNP [dm6]	T	C	1.940e^-4	0.505	DOWNSTREAM CG5953 & 1 other INTERGENIC	TF binding site mE1_TFBS_h mE1_TFBS_HSA
2R	9439296	2R_9439296_SNP [dm3] 2R_13551791_SNP [dm6]	A	G	1.949e^-4	0.505	UPSTREAM CG33156 INTRON CG33156
3L	18061724	3L_18061724_SNP [dm3] 3L_18068624_SNP [dm6]	A	T	1.950e^-4	0.505	DOWNSTREAM CG44006 INTERGENIC
3L	14516345	3L_14516345_SNP [dm3] 3L_14523245_SNP [dm6]	T	G	1.951e^-4	0.505	INTRON bbg	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2L	9060671	2L_9060671_SNP [dm3] 2L_9060671_SNP [dm6]	A	C	1.954e^-4	0.505	INTRON CG31708	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	17584508	2R_17584508_SNP [dm3] 2R_21697003_SNP [dm6]	T	A	1.955e^-4	0.505	UPSTREAM CngB DOWNSTREAM HmgZ INTRON CngB
3R	12896178	3R_12896178_SNP [dm3] 3R_17070456_SNP [dm6]	G	A	1.956e^-4	0.505	DOWNSTREAM Ns1 & 1 other INTERGENIC
3R	13679532	3R_13679532_SNP [dm3] 3R_17853810_SNP [dm6]	T	G	1.958e^-4	0.505	INTRON tinc	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	9824855	X_9824855_SNP [dm3] X_9930822_SNP [dm6]	A	G	1.961e^-4	0.505	UPSTREAM snoRNA:Me28S-U1688 INTRON Idgf4	TF binding site mE1_TFBS_Trl
3L	12489466	3L_12489466_SNP [dm3] 3L_12496366_SNP [dm6]	T	G	1.962e^-4	0.505	INTRON CG10657
3L	15696210	3L_15696210_SNP [dm3] 3L_15703110_SNP [dm6]	T	C	1.964e^-4	0.505	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
3L	7874208	3L_7874208_SNP [dm3] 3L_7881108_SNP [dm6]	C	G	1.980e^-4	0.508	INTRON CG32365
3L	18152769	3L_18152769_SNP [dm3] 3L_18159669_SNP [dm6]	G	A	1.988e^-4	0.508	INTRON CG13699	TF binding site mE1_TFBS_HSA
3L	7873988	3L_7873988_SNP [dm3] 3L_7880888_SNP [dm6]	G	A	1.995e^-4	0.508	INTRON CG32365
3R	25110218	3R_25110218_SNP [dm3] 3R_29284496_SNP [dm6]	T	A	1.995e^-4	0.508	INTERGENIC	regulatory region REDfly_CRMs
3R	13103772	3R_13103772_SNP [dm3] 3R_17278050_SNP [dm6]	G	T	1.998e^-4	0.508	INTERGENIC
3L	18143304	3L_18143304_SNP [dm3] 3L_18150204_SNP [dm6]	G	A	2.000e^-4	0.508	INTRON CG7330
2L	9259413	2L_9259413_SNP [dm3] 2L_9259413_SNP [dm6]	G	C	2.001e^-4	0.508	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2R	11213844	2R_11213844_SNP [dm3] 2R_15326339_SNP [dm6]	C	A	2.005e^-4	0.508	DOWNSTREAM Arf51F & 1 other INTRON CG8157
2L	7068276	2L_7068276_SNP [dm3] 2L_7068276_SNP [dm6]	C	T	2.005e^-4	0.508	SYNONYMOUS_CODING CG11289	TF binding site mE1_TFBS_sens
3L	17682707	3L_17682707_SNP [dm3] 3L_17689607_SNP [dm6]	T	C	2.005e^-4	0.508	UPSTREAM Ccn INTERGENIC
3L	7840342	3L_7840342_SNP [dm3] 3L_7847242_SNP [dm6]	A	G	2.014e^-4	0.51	INTRON Pdp1
2R	13117307	2R_13117307_SNP [dm3] 2R_17229802_SNP [dm6]	C	T	2.020e^-4	0.51	INTRON mbl
2L	5894644	2L_5894644_SNP [dm3] 2L_5894644_SNP [dm6]	T	G	2.021e^-4	0.51	UPSTREAM Acp26Aa INTERGENIC
2R	10786143	2R_10786143_SNP [dm3] 2R_14898638_SNP [dm6]	T	A	2.029e^-4	0.512	UPSTREAM Cyp317a1 INTRON Cyp317a1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	8406742	3L_8406742_SNP [dm3] 3L_8413642_SNP [dm6]	T	A	2.033e^-4	0.512	NON_SYNONYMOUS_CODING mtrm UPSTREAM Oseg1 INTRON Exo70
3L	5912154	3L_5912154_SNP [dm3] 3L_5919054_SNP [dm6]	G	T	2.036e^-4	0.512	INTRON CG10483 EXON CR45167
3L	8223026	3L_8223026_SNP [dm3] 3L_8229926_SNP [dm6]	C	A	2.042e^-4	0.513	INTRON eIF4E-3
3R	6991664	3R_6991664_SNP [dm3] 3R_11165942_SNP [dm6]	A	T	2.050e^-4	0.514	NON_SYNONYMOUS_CODING Ugt86Dg DOWNSTREAM Ugt86De
2L	20680149	2L_20680149_SNP [dm3] 2L_20680149_SNP [dm6]	G	A	2.053e^-4	0.514	SYNONYMOUS_CODING Cen	TF binding site mE1_TFBS_sens
3R	8568335	3R_8568335_SNP [dm3] 3R_12742613_SNP [dm6]	A	T	2.059e^-4	0.515	SYNONYMOUS_CODING CG5999
3L	2428703	3L_2428703_SNP [dm3] 3L_2428703_SNP [dm6]	C	A	2.063e^-4	0.515	UPSTREAM CG45186 INTRON CG45186	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	18319584	3L_18319584_SNP [dm3] 3L_18326484_SNP [dm6]	A	G	2.067e^-4	0.515	INTERGENIC
2R	10372875	2R_10372875_SNP [dm3] 2R_14485370_SNP [dm6]	T	C	2.071e^-4	0.515	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	13095658	X_13095658_SNP [dm3] X_13201625_SNP [dm6]	C	T	2.072e^-4	0.515	SYNONYMOUS_CODING CG44437 INTRON sno	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	15653828	3L_15653828_DEL [dm3] 3L_15660728_DEL [dm6]	ACTA	A	2.082e^-4	0.517	UPSTREAM Eig71Ek DOWNSTREAM Eig71Ei INTRON Eig71Ej
2L	9326869	2L_9326869_SNP [dm3] 2L_9326869_SNP [dm6]	A	G	2.083e^-4	0.517	UPSTREAM CR45457 & 1 other DOWNSTREAM CR45456 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	21040994	2L_21040994_INS [dm3] 2L_21040994_INS [dm6]	A	AA	2.088e^-4	0.517	INTRON CG42238	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA
2R	13717995	2R_13717995_INS [dm3] 2R_17830490_INS [dm6]	A	AA	2.090e^-4	0.517	INTRON grh	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd
2L	20234830	2L_20234830_SNP [dm3] 2L_20234830_SNP [dm6]	C	T	2.098e^-4	0.518	INTERGENIC
2R	10676671	2R_10676671_SNP [dm3] 2R_14789166_SNP [dm6]	A	T	2.108e^-4	0.519	INTRON kn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3R	9916057	3R_9916057_DEL [dm3] 3R_14090335_DEL [dm6]	CTAA	C	2.109e^-4	0.519	UPSTREAM Npc2b INTRON Npc2b
3L	18119883	3L_18119883_DEL [dm3] 3L_18126783_DEL [dm6]	TT	T	2.110e^-4	0.519	INTERGENIC
3L	13843511	3L_13843511_SNP [dm3] 3L_13850411_SNP [dm6]	T	G	2.111e^-4	0.519	SYNONYMOUS_CODING Hml
2R	8716506	2R_8716506_INS [dm3] 2R_12829001_INS [dm6]	A	AA	2.115e^-4	0.519	INTERGENIC
2R	1128609	2R_1128609_SNP [dm3] 2R_5241104_SNP [dm6]	T	C	2.119e^-4	0.519	INTRON Nipped-A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	18092364	3L_18092364_SNP [dm3] 3L_18099264_SNP [dm6]	G	A	2.132e^-4	0.519	INTRON CG13698
X	6088734	X_6088734_SNP [dm3] X_6194701_SNP [dm6]	A	G	2.134e^-4	0.519	DOWNSTREAM CG32750 INTERGENIC
2L	163516	2L_163516_SNP [dm3] 2L_163516_SNP [dm6]	A	C	2.138e^-4	0.519	INTRON spen	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8872037	3L_8872037_SNP [dm3] 3L_8878937_SNP [dm6]	G	A	2.138e^-4	0.519	INTRON dally	TF binding site mE1_TFBS_kn
3L	15691572	3L_15691572_SNP [dm3] 3L_15698472_SNP [dm6]	A	T	2.140e^-4	0.519	INTRON comm2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
2L	7400177	2L_7400177_SNP [dm3] 2L_7400177_SNP [dm6]	G	A	2.142e^-4	0.519	DOWNSTREAM CR44079 INTERGENIC
4	1068956	4_1068956_SNP [dm3] 4_1048330_SNP [dm6]	T	C	2.143e^-4	0.519	INTRON CaMKII
X	6666417	X_6666417_SNP [dm3] X_6772384_SNP [dm6]	G	A	2.143e^-4	0.519	SYNONYMOUS_CODING COQ7 INTRON shf	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	6666353	X_6666353_SNP [dm3] X_6772320_SNP [dm6]	C	G	2.143e^-4	0.519	NON_SYNONYMOUS_CODING COQ7 INTRON shf	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	9323301	2L_9323301_SNP [dm3] 2L_9323301_SNP [dm6]	C	A	2.147e^-4	0.52	INTERGENIC
3L	18112997	3L_18112997_SNP [dm3] 3L_18119897_SNP [dm6]	C	A	2.164e^-4	0.523	SYNONYMOUS_CODING CG7341 DOWNSTREAM CG32195	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	8321174	2L_8321174_SNP [dm3] 2L_8321174_SNP [dm6]	G	A	2.168e^-4	0.523	UTR_3_PRIME CG7787 DOWNSTREAM CG7781	TF binding site mE1_TFBS_ttk
3L	12437548	3L_12437548_SNP [dm3] 3L_12444448_SNP [dm6]	T	A	2.176e^-4	0.524	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	12437799	3L_12437799_SNP [dm3] 3L_12444699_SNP [dm6]	A	T	2.176e^-4	0.524	INTERGENIC
3L	10255277	3L_10255277_SNP [dm3] 3L_10262177_SNP [dm6]	A	C	2.178e^-4	0.524	INTERGENIC
3L	15688428	3L_15688428_SNP [dm3] 3L_15695328_SNP [dm6]	T	G	2.181e^-4	0.524	INTERGENIC
3L	18315840	3L_18315840_SNP [dm3] 3L_18322740_SNP [dm6]	A	G	2.186e^-4	0.524	INTERGENIC
3L	13845130	3L_13845130_SNP [dm3] 3L_13852030_SNP [dm6]	A	G	2.191e^-4	0.524	SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	14458135	2L_14458135_SNP [dm3] 2L_14458135_SNP [dm6]	C	A	2.193e^-4	0.524	DOWNSTREAM CR44730 INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_cad mE1_TFBS_inv mE1_TFBS_sens
3L	15689364	3L_15689364_SNP [dm3] 3L_15696264_SNP [dm6]	G	T	2.195e^-4	0.524	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	10688036	2R_10688036_SNP [dm3] 2R_14800531_SNP [dm6]	A	G	2.199e^-4	0.524	INTRON kn	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
3L	18104011	3L_18104011_SNP [dm3] 3L_18110911_SNP [dm6]	G	T	2.204e^-4	0.524	NON_SYNONYMOUS_CODING mus304	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3R	11540072	3R_11540072_SNP [dm3] 3R_15714350_SNP [dm6]	C	A	2.209e^-4	0.524	INTERGENIC
3R	14407460	3R_14407460_SNP [dm3] 3R_18581738_SNP [dm6]	G	A	2.211e^-4	0.524	INTRON fray & 1 other	TF binding site mE1_TFBS_run
2R	3507190	2R_3507190_SNP [dm3] 2R_7619685_SNP [dm6]	C	A	2.214e^-4	0.524	INTRON CG1358	TF binding site mE1_TFBS_chinmo
2L	7150275	2L_7150275_SNP [dm3] 2L_7150275_SNP [dm6]	A	T	2.215e^-4	0.524	INTRON Pvf3
3R	12335304	3R_12335304_SNP [dm3] 3R_16509582_SNP [dm6]	C	G	2.216e^-4	0.524	INTRON CG42342	TF binding site BDTNP1_TFBS_twi
2R	3448330	2R_3448330_SNP [dm3] 2R_7560825_SNP [dm6]	G	A	2.216e^-4	0.524	SYNONYMOUS_CODING Corin	TF binding site mE1_TFBS_cad
X	12877871	X_12877871_SNP [dm3] X_12983838_SNP [dm6]	T	G	2.220e^-4	0.524	UPSTREAM CG32643 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	13163083	2R_13163083_SNP [dm3] 2R_17275578_SNP [dm6]	C	A	2.221e^-4	0.524	UTR_5_PRIME mbl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	18104971	3L_18104971_SNP [dm3] 3L_18111871_SNP [dm6]	C	T	2.235e^-4	0.526	SYNONYMOUS_CODING mus304
2R	10666533	2R_10666533_SNP [dm3] 2R_14779028_SNP [dm6]	G	A	2.238e^-4	0.526	INTRON kn
3R	25831976	3R_25831976_SNP [dm3] 3R_30006254_SNP [dm6]	G	A	2.243e^-4	0.526	SYNONYMOUS_CODING CG7912 INTRON Nlp
3L	8046087	3L_8046087_SNP [dm3] 3L_8052987_SNP [dm6]	A	T	2.248e^-4	0.526	UTR_3_PRIME nmo DOWNSTREAM nmo
2L	9157346	2L_9157346_SNP [dm3] 2L_9157346_SNP [dm6]	A	C	2.256e^-4	0.526	INTRON CG32982
3R	15039552	3R_15039552_SNP [dm3] 3R_19213830_SNP [dm6]	G	A	2.261e^-4	0.526	SPLICE_SITE_REGION cry INTRON cry
2R	18653915	2R_18653915_SNP [dm3] 2R_22766410_SNP [dm6]	A	G	2.262e^-4	0.526	DOWNSTREAM CG13527 INTRON CG42260
3L	18111898	3L_18111898_SNP [dm3] 3L_18118798_SNP [dm6]	T	A	2.263e^-4	0.526	UTR_3_PRIME CG32195 INTRON CG7341
X	6665055	X_6665055_SNP [dm3] X_6771022_SNP [dm6]	C	T	2.266e^-4	0.526	UPSTREAM COQ7 DOWNSTREAM shf & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt
2L	19408886	2L_19408886_SNP [dm3] 2L_19408886_SNP [dm6]	T	A	2.267e^-4	0.526	INTRON Pax
X	3277717	X_3277717_SNP [dm3] X_3383684_SNP [dm6]	C	A	2.269e^-4	0.526	INTRON dm & 1 other
2R	10597880	2R_10597880_SNP [dm3] 2R_14710375_SNP [dm6]	G	A	2.270e^-4	0.526	INTRON mspo
3L	14536968	3L_14536968_SNP [dm3] 3L_14543868_SNP [dm6]	A	C	2.274e^-4	0.526	INTRON CG9238
2L	620049	2L_620049_SNP [dm3] 2L_620049_SNP [dm6]	A	G	2.276e^-4	0.526	DOWNSTREAM lectin-21Cb INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2R	8965878	2R_8965878_SNP [dm3] 2R_13078373_SNP [dm6]	C	A	2.284e^-4	0.526	INTRON Drl-2	TF binding site mE1_TFBS_cad
2R	10153715	2R_10153715_SNP [dm3] 2R_14266210_SNP [dm6]	A	T	2.284e^-4	0.526	INTRON CG8547
3R	12896534	3R_12896534_SNP [dm3] 3R_17070812_SNP [dm6]	T	A	2.287e^-4	0.526	DOWNSTREAM Dad INTRON Ns1
2L	12703189	2L_12703189_SNP [dm3] 2L_12703189_SNP [dm6]	A	G	2.292e^-4	0.526	SYNONYMOUS_CODING CG5776	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	6661213	X_6661213_SNP [dm3] X_6767180_SNP [dm6]	C	T	2.294e^-4	0.526	SPLICE_SITE_REGION CG14438 INTRON CG14438	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	15847168	3L_15847168_SNP [dm3] 3L_15854068_SNP [dm6]	A	G	2.298e^-4	0.526	INTRON pHCl
2L	9253432	2L_9253432_SNP [dm3] 2L_9253432_SNP [dm6]	A	C	2.298e^-4	0.526	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
X	9986197	X_9986197_SNP [dm3] X_10092164_SNP [dm6]	T	C	2.302e^-4	0.526	INTRON RhoU	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	11797458	2R_11797458_SNP [dm3] 2R_15909953_SNP [dm6]	T	C	2.308e^-4	0.526	INTRON sli	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	1729847	2R_1729847_SNP [dm3] 2R_5842342_SNP [dm6]	C	G	2.310e^-4	0.526	INTRON dpr12
2R	15974043	2R_15974043_SNP [dm3] 2R_20086538_SNP [dm6]	G	A	2.322e^-4	0.526	EXON CR44632
2R	8419563	2R_8419563_SNP [dm3] 2R_12532058_SNP [dm6]	G	A	2.326e^-4	0.526	INTRON fra	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	12877901	X_12877901_MNP [dm3] X_12983868_MNP [dm6]	TAT	ATA	2.326e^-4	0.526	UPSTREAM CG32643 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13846985	3L_13846985_SNP [dm3] 3L_13853885_SNP [dm6]	T	A	2.328e^-4	0.526	NON_SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad
2L	20080756	2L_20080756_SNP [dm3] 2L_20080756_SNP [dm6]	C	A	2.328e^-4	0.526	UPSTREAM fok DOWNSTREAM fok INTRON neb & 1 other	TF binding site mE1_TFBS_inv
3L	16654851	3L_16654851_SNP [dm3] 3L_16661751_SNP [dm6]	A	C	2.331e^-4	0.526	UPSTREAM Baldspot DOWNSTREAM Galphaf INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	10816594	2R_10816594_SNP [dm3] 2R_14929089_SNP [dm6]	T	A	2.335e^-4	0.526	UPSTREAM CG10249 DOWNSTREAM CG10253 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	16380950	2L_16380950_SNP [dm3] 2L_16380950_SNP [dm6]	A	G	2.335e^-4	0.526	INTERGENIC
2R	11101842	2R_11101842_SNP [dm3] 2R_15214337_SNP [dm6]	C	G	2.341e^-4	0.526	NON_SYNONYMOUS_CODING CG8093 UPSTREAM row	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	14991731	2R_14991731_SNP [dm3] 2R_19104226_SNP [dm6]	C	T	2.342e^-4	0.526	INTRON 5-HT1A
X	12173798	X_12173798_SNP [dm3] X_12279765_SNP [dm6]	G	A	2.342e^-4	0.526	INTRON Ten-a
3L	15686460	3L_15686460_SNP [dm3] 3L_15693360_SNP [dm6]	A	G	2.344e^-4	0.526	INTERGENIC	silencer mE1_HDAC_PRE
3L	18112491	3L_18112491_SNP [dm3] 3L_18119391_SNP [dm6]	A	G	2.345e^-4	0.526	DOWNSTREAM CG32195 INTRON CG7341	TF binding site mE1_TFBS_cad
2L	18417852	2L_18417852_SNP [dm3] 2L_18417852_SNP [dm6]	G	C	2.346e^-4	0.526	INTERGENIC
X	20286228	X_20286228_SNP [dm3] X_20415201_SNP [dm6]	A	G	2.350e^-4	0.526	UPSTREAM Obp19a INTERGENIC	regulatory region REDfly_CRMs
X	6660867	X_6660867_SNP [dm3] X_6766834_SNP [dm6]	C	A	2.353e^-4	0.526	SYNONYMOUS_CODING CG14438	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10373908	2R_10373908_SNP [dm3] 2R_14486403_SNP [dm6]	A	T	2.353e^-4	0.526	INTRON L	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9326968	3R_9326968_SNP [dm3] 3R_13501246_SNP [dm6]	A	C	2.353e^-4	0.526	INTERGENIC
2R	8954810	2R_8954810_SNP [dm3] 2R_13067305_SNP [dm6]	A	G	2.353e^-4	0.526	INTRON Drl-2	TF binding site mE1_TFBS_chinmo
2R	10573735	2R_10573735_SNP [dm3] 2R_14686230_SNP [dm6]	G	A	2.355e^-4	0.526	INTRON mspo
2R	17281289	2R_17281289_SNP [dm3] 2R_21393784_SNP [dm6]	G	A	2.357e^-4	0.526	UTR_3_PRIME Sdc DOWNSTREAM Sdc
3R	11534463	3R_11534463_SNP [dm3] 3R_15708741_SNP [dm6]	G	A	2.362e^-4	0.526	DOWNSTREAM CG5404 INTERGENIC
3L	6530093	3L_6530093_SNP [dm3] 3L_6536993_SNP [dm6]	T	C	2.363e^-4	0.526	INTRON sfl
X	20258876	X_20258876_SNP [dm3] X_20387849_SNP [dm6]	G	T	2.366e^-4	0.526	INTERGENIC
3L	6241374	3L_6241374_SNP [dm3] 3L_6248274_SNP [dm6]	C	A	2.369e^-4	0.526	INTRON Best2
2R	10304901	2R_10304901_SNP [dm3] 2R_14417396_SNP [dm6]	G	T	2.380e^-4	0.528	INTERGENIC
2R	18722216	2R_18722216_SNP [dm3] 2R_22834693_SNP [dm6]	T	A	2.381e^-4	0.528	UTR_5_PRIME CG12490 DOWNSTREAM CG30265
3L	18253537	3L_18253537_SNP [dm3] 3L_18260437_SNP [dm6]	C	G	2.383e^-4	0.528	INTERGENIC
2R	7963730	2R_7963730_SNP [dm3] 2R_12076225_SNP [dm6]	G	T	2.386e^-4	0.528	INTRON CG8888
2L	19477402	2L_19477402_SNP [dm3] 2L_19477402_SNP [dm6]	A	T	2.393e^-4	0.528	INTERGENIC	TF binding site mE1_TFBS_cad
X	6905965	X_6905965_SNP [dm3] X_7011932_SNP [dm6]	C	T	2.393e^-4	0.528	SYNONYMOUS_CODING CG42308 UTR_3_PRIME CG32736 UPSTREAM cm DOWNSTREAM CG3032	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	13084219	3R_13084219_SNP [dm3] 3R_17258497_SNP [dm6]	C	T	2.398e^-4	0.528	INTRON beat-IIb
3L	10364117	3L_10364117_SNP [dm3] 3L_10371017_SNP [dm6]	A	G	2.398e^-4	0.528	INTERGENIC
2L	842730	2L_842730_SNP [dm3] 2L_842730_SNP [dm6]	C	T	2.409e^-4	0.529	START_GAINED drongo UTR_5_PRIME drongo INTRON drongo
2R	10589436	2R_10589436_SNP [dm3] 2R_14701931_SNP [dm6]	G	C	2.411e^-4	0.529	INTRON mspo
2L	9262205	2L_9262205_SNP [dm3] 2L_9262205_SNP [dm6]	G	C	2.413e^-4	0.529	INTRON Ggamma30A EXON CR45262
3R	17715056	3R_17715056_SNP [dm3] 3R_21889334_SNP [dm6]	A	G	2.425e^-4	0.531	UPSTREAM CR43844 INTRON CG6678	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_jumu
2L	10401356	2L_10401356_SNP [dm3] 2L_10401356_SNP [dm6]	C	G	2.438e^-4	0.532	SYNONYMOUS_CODING Cnot4
2L	19898616	2L_19898616_SNP [dm3] 2L_19898616_SNP [dm6]	C	T	2.443e^-4	0.532	INTRON sick
2L	17245143	2L_17245143_SNP [dm3] 2L_17245143_SNP [dm6]	C	G	2.445e^-4	0.532	DOWNSTREAM CR44396 INTRON beat-IIIc	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	15826838	2L_15826838_SNP [dm3] 2L_15826838_SNP [dm6]	T	A	2.454e^-4	0.532	INTERGENIC
3R	14405649	3R_14405649_SNP [dm3] 3R_18579927_SNP [dm6]	A	G	2.459e^-4	0.532	INTRON fray & 1 other
3R	14405652	3R_14405652_SNP [dm3] 3R_18579930_SNP [dm6]	G	A	2.459e^-4	0.532	INTRON fray & 1 other
2L	5581756	2L_5581756_SNP [dm3] 2L_5581756_SNP [dm6]	T	C	2.462e^-4	0.532	UPSTREAM CG14011 INTERGENIC
3L	10553626	3L_10553626_SNP [dm3] 3L_10560526_SNP [dm6]	G	T	2.463e^-4	0.532	INTRON A2bp1
2L	9261448	2L_9261448_SNP [dm3] 2L_9261448_SNP [dm6]	T	A	2.463e^-4	0.532	DOWNSTREAM CR45262 INTRON Ggamma30A
2R	3489291	2R_3489291_SNP [dm3] 2R_7601786_SNP [dm6]	G	C	2.465e^-4	0.532	INTRON CG1358
2R	10589456	2R_10589456_SNP [dm3] 2R_14701951_SNP [dm6]	A	C	2.467e^-4	0.532	INTRON mspo
2L	2356324	2L_2356324_SNP [dm3] 2L_2356324_SNP [dm6]	G	A	2.472e^-4	0.532	INTRON CG9967 & 1 other
2R	19031734	2R_19031734_SNP [dm3] 2R_23144211_SNP [dm6]	G	C	2.473e^-4	0.532	SYNONYMOUS_CODING Klp59D	TF binding site mE1_TFBS_cad
2R	10371621	2R_10371621_SNP [dm3] 2R_14484116_SNP [dm6]	G	A	2.474e^-4	0.532	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	16565368	3L_16565368_SNP [dm3] 3L_16572268_SNP [dm6]	A	G	2.477e^-4	0.532	INTRON Mipp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3R	21964443	3R_21964443_SNP [dm3] 3R_26138721_SNP [dm6]	C	T	2.477e^-4	0.532	INTERGENIC
2L	8959235	2L_8959235_SNP [dm3] 2L_8959235_SNP [dm6]	T	A	2.479e^-4	0.532	UPSTREAM CG31886 DOWNSTREAM CG9525 INTERGENIC
2R	17304934	2R_17304934_SNP [dm3] 2R_21417429_SNP [dm6]	T	G	2.479e^-4	0.532	UPSTREAM Sdc INTRON Sdc
2R	8966094	2R_8966094_SNP [dm3] 2R_13078589_SNP [dm6]	T	G	2.483e^-4	0.532	INTRON Drl-2	insulator Insulator_Class_II.mE01
3L	10264073	3L_10264073_SNP [dm3] 3L_10270973_SNP [dm6]	C	T	2.486e^-4	0.532	DOWNSTREAM CR45242 INTERGENIC	regulatory region REDfly_CRMs
2L	16334673	2L_16334673_SNP [dm3] 2L_16334673_SNP [dm6]	T	A	2.491e^-4	0.533	SYNONYMOUS_CODING CG31817	TF binding site mE1_TFBS_sens
3L	7874119	3L_7874119_SNP [dm3] 3L_7881019_SNP [dm6]	A	C	2.500e^-4	0.534	INTRON CG32365
2L	851918	2L_851918_SNP [dm3] 2L_851918_SNP [dm6]	G	A	2.506e^-4	0.535	SYNONYMOUS_CODING CG4291 UPSTREAM drongo & 1 other DOWNSTREAM CR44060	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
4	1251268	4_1251268_SNP [dm3] 4_1247542_SNP [dm6]	G	A	2.512e^-4	0.535	INTRON Caps	transposable element FlyBase
2L	7297692	2L_7297692_SNP [dm3] 2L_7297692_SNP [dm6]	T	C	2.513e^-4	0.535	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2L	6054208	2L_6054208_INS [dm3] 2L_6054208_INS [dm6]	C	CTC	2.515e^-4	0.535	UPSTREAM CG13995 DOWNSTREAM CG9135 INTERGENIC
2R	17584459	2R_17584459_SNP [dm3] 2R_21696954_SNP [dm6]	G	A	2.517e^-4	0.535	UPSTREAM CngB DOWNSTREAM HmgZ INTRON CngB
2R	14706091	2R_14706091_SNP [dm3] 2R_18818586_SNP [dm6]	G	A	2.525e^-4	0.535	UPSTREAM Phb2 INTERGENIC
3R	13679134	3R_13679134_SNP [dm3] 3R_17853412_SNP [dm6]	T	A	2.526e^-4	0.535	INTRON tinc	TF binding site mE1_TFBS_inv
2L	4091409	2L_4091409_SNP [dm3] 2L_4091409_SNP [dm6]	A	C	2.527e^-4	0.535	INTRON ed
X	21217566	X_21217566_SNP [dm3] X_21346539_SNP [dm6]	G	T	2.534e^-4	0.536	UTR_3_PRIME dod & 1 other
2L	18883454	2L_18883454_SNP [dm3] 2L_18883454_SNP [dm6]	T	A	2.540e^-4	0.536	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	14457964	2L_14457964_SNP [dm3] 2L_14457964_SNP [dm6]	T	G	2.541e^-4	0.536	DOWNSTREAM CR44730 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
3R	9220346	3R_9220346_SNP [dm3] 3R_13394624_SNP [dm6]	G	A	2.546e^-4	0.536	INTRON CCHa2
2R	10666527	2R_10666527_SNP [dm3] 2R_14779022_SNP [dm6]	G	C	2.555e^-4	0.538	INTRON kn
3L	14278876	3L_14278876_SNP [dm3] 3L_14285776_SNP [dm6]	T	A	2.557e^-4	0.538	INTRON fz
3L	12890394	3L_12890394_SNP [dm3] 3L_12897294_SNP [dm6]	G	A	2.567e^-4	0.538	INTERGENIC
3R	16376967	3R_16376967_SNP [dm3] 3R_20551245_SNP [dm6]	A	G	2.568e^-4	0.538	UPSTREAM Stat92E INTRON Stat92E	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Ubx
2L	9326971	2L_9326971_DEL [dm3] 2L_9326971_DEL [dm6]	ATATACAATTG...	A	2.569e^-4	0.538	UPSTREAM CR45457 & 1 other DOWNSTREAM CR45456 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	7876108	3L_7876108_SNP [dm3] 3L_7883008_SNP [dm6]	T	G	2.570e^-4	0.538	INTRON CG32365
2L	14378440	2L_14378440_SNP [dm3] 2L_14378440_SNP [dm6]	C	T	2.571e^-4	0.538	UTR_3_PRIME ppk
3L	9046970	3L_9046970_SNP [dm3] 3L_9053870_SNP [dm6]	C	T	2.576e^-4	0.538	UPSTREAM Argk INTRON Argk	TF binding site mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	21653973	3R_21653973_SNP [dm3] 3R_25828251_SNP [dm6]	C	T	2.591e^-4	0.541	INTERGENIC
2L	5796173	2L_5796173_SNP [dm3] 2L_5796173_SNP [dm6]	G	A	2.598e^-4	0.541	INTRON CG9171
2L	12703207	2L_12703207_SNP [dm3] 2L_12703207_SNP [dm6]	T	A	2.603e^-4	0.541	SYNONYMOUS_CODING CG5776	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	17290353	2L_17290353_SNP [dm3] 2L_17290353_SNP [dm6]	T	C	2.607e^-4	0.541	DOWNSTREAM CG6380 INTERGENIC
3L	12637244	3L_12637244_DEL [dm3] 3L_12644144_DEL [dm6]	GGAGATGCCCC...	TA	2.608e^-4	0.541	INTRON CR32111	regulatory region REDfly_CRMs
2L	4272021	2L_4272021_SNP [dm3] 2L_4272021_SNP [dm6]	C	T	2.613e^-4	0.541	INTERGENIC
2L	19237485	2L_19237485_SNP [dm3] 2L_19237485_SNP [dm6]	C	G	2.613e^-4	0.541	INTERGENIC
2L	18957534	2L_18957534_SNP [dm3] 2L_18957534_SNP [dm6]	A	T	2.615e^-4	0.541	UPSTREAM CG10623 DOWNSTREAM Nak INTERGENIC
3L	12480356	3L_12480356_SNP [dm3] 3L_12487256_SNP [dm6]	C	T	2.619e^-4	0.541	SYNONYMOUS_CODING CG10660 DOWNSTREAM CG33725	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	20425903	2L_20425903_SNP [dm3] 2L_20425903_SNP [dm6]	G	A	2.621e^-4	0.541	UPSTREAM CG31688 INTERGENIC
2L	4318383	2L_4318383_SNP [dm3] 2L_4318383_SNP [dm6]	C	T	2.631e^-4	0.542	INTRON tutl	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	15684453	3L_15684453_SNP [dm3] 3L_15691353_SNP [dm6]	C	A	2.632e^-4	0.542	INTRON CG34451	TF binding site BDTNP1_TFBS_slp1 BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
3R	12563220	3R_12563220_SNP [dm3] 3R_16737498_SNP [dm6]	C	G	2.635e^-4	0.542	INTERGENIC	regulatory region REDfly_CRMs
3L	1329894	3L_1329894_SNP [dm3] 3L_1329894_SNP [dm6]	G	T	2.635e^-4	0.542	UPSTREAM mtacp1 DOWNSTREAM Myo61F INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	20081660	2L_20081660_SNP [dm3] 2L_20081660_SNP [dm6]	C	A	2.636e^-4	0.542	UTR_3_PRIME fok DOWNSTREAM fok INTRON neb & 1 other
3L	14524970	3L_14524970_SNP [dm3] 3L_14531870_SNP [dm6]	C	T	2.645e^-4	0.542	INTRON bbg
3L	10605050	3L_10605050_SNP [dm3] 3L_10611950_SNP [dm6]	C	T	2.650e^-4	0.542	INTERGENIC
2L	6501646	2L_6501646_SNP [dm3] 2L_6501646_SNP [dm6]	T	C	2.650e^-4	0.542	INTRON CG31637	TF binding site mE1_TFBS_sens
3L	18253518	3L_18253518_INS [dm3] 3L_18260418_INS [dm6]	T	TGGTCA	2.651e^-4	0.542	INTERGENIC
2L	17245142	2L_17245142_SNP [dm3] 2L_17245142_SNP [dm6]	A	C	2.652e^-4	0.542	DOWNSTREAM CR44396 INTRON beat-IIIc	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	18134276	3L_18134276_SNP [dm3] 3L_18141176_SNP [dm6]	C	T	2.666e^-4	0.544	INTRON gk
2L	20425670	2L_20425670_SNP [dm3] 2L_20425670_SNP [dm6]	A	G	2.679e^-4	0.546	UPSTREAM CG31688 INTERGENIC
3L	8546058	3L_8546058_SNP [dm3] 3L_8552958_SNP [dm6]	T	A	2.699e^-4	0.549	INTRON rhea
3L	16692297	3L_16692297_SNP [dm3] 3L_16699197_SNP [dm6]	A	G	2.699e^-4	0.549	INTRON Lasp & 1 other
2L	5954863	2L_5954863_SNP [dm3] 2L_5954863_SNP [dm6]	T	C	2.703e^-4	0.549	SYNONYMOUS_CODING CG9044 DOWNSTREAM CG13999	TF binding site mE1_TFBS_inv
2R	11101804	2R_11101804_SNP [dm3] 2R_15214299_SNP [dm6]	C	T	2.704e^-4	0.549	UTR_3_PRIME CG8093 UPSTREAM row	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	11704581	2R_11704581_SNP [dm3] 2R_15817076_SNP [dm6]	A	G	2.708e^-4	0.549	UPSTREAM Zasp52 INTRON tun	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	19313601	2L_19313601_SNP [dm3] 2L_19313601_SNP [dm6]	C	T	2.708e^-4	0.549	INTERGENIC	TF binding site mE1_TFBS_cad
3R	24781632	3R_24781632_SNP [dm3] 3R_28955910_SNP [dm6]	A	G	2.717e^-4	0.549	INTRON CG14521
3L	16810240	3L_16810240_SNP [dm3] 3L_16817140_SNP [dm6]	A	G	2.718e^-4	0.549	INTRON nudC & 1 other
3L	18147826	3L_18147826_SNP [dm3] 3L_18154726_SNP [dm6]	G	C	2.727e^-4	0.55	DOWNSTREAM CG7330 & 1 other INTERGENIC
2R	5552951	2R_5552951_SNP [dm3] 2R_9665446_SNP [dm6]	C	G	2.730e^-4	0.55	INTRON Mmp2
2L	22095229	2L_22095229_SNP [dm3] 2L_22095229_SNP [dm6]	G	A	2.733e^-4	0.55	INTERGENIC	transposable element FlyBase
3R	15001601	3R_15001601_SNP [dm3] 3R_19175879_SNP [dm6]	C	A	2.735e^-4	0.55	INTERGENIC
3L	18137945	3L_18137945_SNP [dm3] 3L_18144845_SNP [dm6]	T	C	2.742e^-4	0.55	INTRON gk
2L	17995342	2L_17995342_SNP [dm3] 2L_17995342_SNP [dm6]	T	C	2.744e^-4	0.55	INTERGENIC
3L	12637232	3L_12637232_SNP [dm3] 3L_12644132_SNP [dm6]	T	C	2.750e^-4	0.55	INTRON CR32111	regulatory region REDfly_CRMs
3L	13845169	3L_13845169_SNP [dm3] 3L_13852069_SNP [dm6]	C	T	2.751e^-4	0.55	SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	6907089	X_6907089_SNP [dm3] X_7013056_SNP [dm6]	A	G	2.753e^-4	0.55	SYNONYMOUS_CODING CG3032 UPSTREAM CG4593 DOWNSTREAM CG32736 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	10911463	2R_10911463_DEL [dm3] 2R_15023958_DEL [dm6]	TGGGTGGTGGTTTGT...	T	2.753e^-4	0.55	DOWNSTREAM Obp51a INTRON hbs
3L	15826400	3L_15826400_SNP [dm3] 3L_15833300_SNP [dm6]	A	T	2.755e^-4	0.55	SYNONYMOUS_CODING CG12713 DOWNSTREAM CG18081
3L	18315019	3L_18315019_SNP [dm3] 3L_18321919_SNP [dm6]	T	A	2.763e^-4	0.551	INTERGENIC
3R	14408659	3R_14408659_SNP [dm3] 3R_18582937_SNP [dm6]	A	G	2.770e^-4	0.551	INTRON fray & 1 other	TF binding site BDTNP1_TFBS_dl
2L	3241354	2L_3241354_SNP [dm3] 2L_3241354_SNP [dm6]	G	C	2.774e^-4	0.551	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	10724596	2R_10724596_SNP [dm3] 2R_14837091_SNP [dm6]	G	T	2.777e^-4	0.551	INTERGENIC
3R	25403472	3R_25403472_DEL [dm3] 3R_29577750_DEL [dm6]	ACAGAACA	A	2.778e^-4	0.551	INTERGENIC	TF binding site mE1_TFBS_sens
2L	1912752	2L_1912752_SNP [dm3] 2L_1912752_SNP [dm6]	G	A	2.779e^-4	0.551	INTRON CG7337
3R	11259038	3R_11259038_SNP [dm3] 3R_15433316_SNP [dm6]	C	A	2.780e^-4	0.551	INTRON CG6118
3R	25548810	3R_25548810_SNP [dm3] 3R_29723088_SNP [dm6]	A	G	2.784e^-4	0.551	UPSTREAM Pcd DOWNSTREAM CG15506 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_disco mE1_TFBS_HSA
2R	3531242	2R_3531242_SNP [dm3] 2R_7643737_SNP [dm6]	G	A	2.788e^-4	0.552	SYNONYMOUS_CODING CG43340 INTRON CG43340
2L	14459025	2L_14459025_SNP [dm3] 2L_14459025_SNP [dm6]	G	A	2.811e^-4	0.554	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_inv
2R	13797991	2R_13797991_SNP [dm3] 2R_17910486_SNP [dm6]	T	G	2.812e^-4	0.554	INTRON Elk
3L	14092636	3L_14092636_SNP [dm3] 3L_14099536_SNP [dm6]	A	C	2.814e^-4	0.554	INTERGENIC
3L	3266601	3L_3266601_SNP [dm3] 3L_3266601_SNP [dm6]	C	T	2.823e^-4	0.554	START_GAINED ckd UTR_5_PRIME ckd	TF binding site BDTNP1_TFBS_dl
3L	18064396	3L_18064396_SNP [dm3] 3L_18071296_SNP [dm6]	T	A	2.825e^-4	0.554	INTRON CG44005
2L	13801813	2L_13801813_DEL [dm3] 2L_13801813_DEL [dm6]	AGCGAAATG	A	2.832e^-4	0.554	INTERGENIC
2L	17923288	2L_17923288_SNP [dm3] 2L_17923288_SNP [dm6]	T	A	2.832e^-4	0.554	INTERGENIC
3L	18255428	3L_18255428_SNP [dm3] 3L_18262328_SNP [dm6]	A	C	2.833e^-4	0.554	INTERGENIC
3R	15925306	3R_15925306_INS [dm3] 3R_20099584_INS [dm6]	T	TCACTTATAAGTAT...	2.835e^-4	0.554	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	16359356	2L_16359356_SNP [dm3] 2L_16359356_SNP [dm6]	A	G	2.836e^-4	0.554	INTERGENIC
3L	3636022	3L_3636022_SNP [dm3] 3L_3636022_SNP [dm6]	T	A	2.842e^-4	0.554	INTRON dar1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	20286104	X_20286104_SNP [dm3] X_20415077_SNP [dm6]	A	T	2.843e^-4	0.554	UPSTREAM CG15458 & 1 other INTERGENIC	regulatory region REDfly_CRMs
3L	18106303	3L_18106303_SNP [dm3] 3L_18113203_SNP [dm6]	C	A	2.847e^-4	0.554	DOWNSTREAM mus304 INTRON CG32195 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	11626174	3R_11626174_SNP [dm3] 3R_15800452_SNP [dm6]	C	T	2.852e^-4	0.554	INTRON nsl1
X	13114053	X_13114053_SNP [dm3] X_13220020_SNP [dm6]	T	G	2.855e^-4	0.554	INTRON mew	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
2L	12703188	2L_12703188_SNP [dm3] 2L_12703188_SNP [dm6]	G	T	2.857e^-4	0.554	NON_SYNONYMOUS_CODING CG5776	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	18140656	3L_18140656_SNP [dm3] 3L_18147556_SNP [dm6]	C	G	2.858e^-4	0.554	INTERGENIC
X	6668717	X_6668717_SNP [dm3] X_6774684_SNP [dm6]	C	T	2.861e^-4	0.554	NON_SYNONYMOUS_CODING shf	TF binding site mE1_TFBS_chinmo
2L	6979965	2L_6979965_SNP [dm3] 2L_6979965_SNP [dm6]	T	A	2.864e^-4	0.554	SYNONYMOUS_CODING uif	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	12563207	3R_12563207_SNP [dm3] 3R_16737485_SNP [dm6]	A	T	2.864e^-4	0.554	INTERGENIC	regulatory region REDfly_CRMs
3L	1455609	3L_1455609_INS [dm3] 3L_1455609_INS [dm6]	G	GA	2.866e^-4	0.554	INTRON Ptp61F	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_sens
2L	18957696	2L_18957696_SNP [dm3] 2L_18957696_SNP [dm6]	G	A	2.866e^-4	0.554	UPSTREAM CG10623 DOWNSTREAM Nak INTERGENIC
2L	8653941	2L_8653941_SNP [dm3] 2L_8653941_SNP [dm6]	A	G	2.878e^-4	0.554	INTRON Sema-1a
3R	9745534	3R_9745534_SNP [dm3] 3R_13919812_SNP [dm6]	G	A	2.879e^-4	0.554	INTERGENIC
3R	13679472	3R_13679472_SNP [dm3] 3R_17853750_SNP [dm6]	G	A	2.886e^-4	0.554	INTRON tinc	TF binding site mE1_TFBS_inv
2R	10565215	2R_10565215_SNP [dm3] 2R_14677710_SNP [dm6]	G	A	2.886e^-4	0.554	NON_SYNONYMOUS_CODING CG30480 UTR_5_PRIME CG30479 INTRON mspo
3L	13926159	3L_13926159_SNP [dm3] 3L_13933059_SNP [dm6]	G	A	2.887e^-4	0.554	SYNONYMOUS_CODING Gl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	3962243	2L_3962243_SNP [dm3] 2L_3962243_SNP [dm6]	A	G	2.889e^-4	0.554	INTRON fred
2R	13224815	2R_13224815_SNP [dm3] 2R_17337310_SNP [dm6]	C	T	2.898e^-4	0.554	INTRON mbl
3R	15260728	3R_15260728_SNP [dm3] 3R_19435006_SNP [dm6]	T	A	2.900e^-4	0.554	INTRON CG31221
2R	9849715	2R_9849715_INS [dm3] 2R_13962210_INS [dm6]	T	TGAT	2.900e^-4	0.554	INTRON Cp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	12315375	3R_12315375_SNP [dm3] 3R_16489653_SNP [dm6]	A	G	2.903e^-4	0.554	SYNONYMOUS_CODING Cad89D	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	15708663	3L_15708663_SNP [dm3] 3L_15715563_SNP [dm6]	A	G	2.905e^-4	0.554	UPSTREAM CG42571 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	14247497	2L_14247497_SNP [dm3] 2L_14247497_SNP [dm6]	C	G	2.905e^-4	0.554	INTERGENIC
3L	6338609	3L_6338609_SNP [dm3] 3L_6345509_SNP [dm6]	T	A	2.905e^-4	0.554	INTRON CG13300	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
3R	12335302	3R_12335302_SNP [dm3] 3R_16509580_SNP [dm6]	C	T	2.907e^-4	0.554	INTRON CG42342	TF binding site BDTNP1_TFBS_twi
X	6660025	X_6660025_SNP [dm3] X_6765992_SNP [dm6]	C	T	2.912e^-4	0.554	NON_SYNONYMOUS_CODING CG14438	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	5871345	3L_5871345_SNP [dm3] 3L_5878245_SNP [dm6]	A	T	2.915e^-4	0.554	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9252001	2L_9252001_SNP [dm3] 2L_9252001_SNP [dm6]	G	A	2.916e^-4	0.554	SYNONYMOUS_CODING borr UPSTREAM aust & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	10264071	3L_10264071_SNP [dm3] 3L_10270971_SNP [dm6]	G	C	2.926e^-4	0.554	DOWNSTREAM CR45242 INTERGENIC	regulatory region REDfly_CRMs
2L	20546230	2L_20546230_SNP [dm3] 2L_20546230_SNP [dm6]	G	A	2.928e^-4	0.554	INTERGENIC
3L	18249709	3L_18249709_SNP [dm3] 3L_18256609_SNP [dm6]	C	G	2.930e^-4	0.554	INTERGENIC
3L	18254811	3L_18254811_SNP [dm3] 3L_18261711_SNP [dm6]	C	T	2.931e^-4	0.554	INTERGENIC
2L	10279874	2L_10279874_SNP [dm3] 2L_10279874_SNP [dm6]	C	T	2.933e^-4	0.554	INTRON CG34043
3R	16336865	3R_16336865_SNP [dm3] 3R_20511143_SNP [dm6]	A	T	2.934e^-4	0.554	UPSTREAM CG4288 INTRON CG4288
3L	7874221	3L_7874221_INS [dm3] 3L_7881121_INS [dm6]	T	TTGAACTT	2.947e^-4	0.555	INTRON CG32365
3R	12896016	3R_12896016_SNP [dm3] 3R_17070294_SNP [dm6]	C	T	2.948e^-4	0.555	UTR_3_PRIME Dad DOWNSTREAM Ns1
2L	12255051	2L_12255051_DEL [dm3] 2L_12255051_DEL [dm6]	AA	A	2.948e^-4	0.555	INTRON aret
2L	4269359	2L_4269359_SNP [dm3] 2L_4269359_SNP [dm6]	G	C	2.951e^-4	0.555	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	20234801	2L_20234801_SNP [dm3] 2L_20234801_SNP [dm6]	T	C	2.951e^-4	0.555	INTERGENIC
3L	7873920	3L_7873920_SNP [dm3] 3L_7880820_SNP [dm6]	T	A	2.961e^-4	0.555	INTRON CG32365
X	14288504	X_14288504_SNP [dm3] X_14394471_SNP [dm6]	G	C	2.962e^-4	0.555	INTRON dpr8

By genomic position
Variant impact
Gene name

Delta_Death.at.48h Experience 4 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results