DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=6.543e^-13)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_3R_P	0.01149

Kruskal-Wallis test

Covariate	χ²	p-value
In_2L_t	8.0478	0.0179
In_2R_NS	8.2366	0.0163
In_3R_P	7.517	0.0233

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

4622 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2R	10702960	2R_10702960_SNP [dm3] 2R_14815455_SNP [dm6]	A	C	1.620e^-10	1.450e^-4	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2R	10749489	2R_10749489_SNP [dm3] 2R_14861984_SNP [dm6]	C	T	1.620e^-10	1.450e^-4	NON_SYNONYMOUS_CODING Inr-a	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	10715639	2R_10715639_SNP [dm3] 2R_14828134_SNP [dm6]	A	T	3.467e^-10	1.450e^-4	INTERGENIC
2R	10705677	2R_10705677_SNP [dm3] 2R_14818172_SNP [dm6]	G	T	4.108e^-10	1.450e^-4	NON_SYNONYMOUS_CODING CG10202	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
2R	10719564	2R_10719564_SNP [dm3] 2R_14832059_SNP [dm6]	G	A	4.108e^-10	1.450e^-4	UPSTREAM CG10205 INTERGENIC
2R	10713301	2R_10713301_SNP [dm3] 2R_14825796_SNP [dm6]	T	G	4.640e^-10	1.450e^-4	INTERGENIC
2R	10700525	2R_10700525_SNP [dm3] 2R_14813020_SNP [dm6]	G	A	5.737e^-10	1.498e^-4	INTERGENIC	regulatory region REDfly_CRMs
2R	10721948	2R_10721948_SNP [dm3] 2R_14834443_SNP [dm6]	C	A	6.391e^-10	1.498e^-4	DOWNSTREAM CG10205 INTERGENIC
2R	10701426	2R_10701426_SNP [dm3] 2R_14813921_SNP [dm6]	G	A	8.395e^-10	1.750e^-4	INTERGENIC	TF binding site mE1_TFBS_Trl
2R	10721104	2R_10721104_SNP [dm3] 2R_14833599_SNP [dm6]	G	A	3.707e^-9	6.953e^-4	NON_SYNONYMOUS_CODING CG10205 UTR_3_PRIME CG10205
X	7331771	X_7331771_SNP [dm3] X_7437738_SNP [dm6]	C	G	4.742e^-9	8.086e^-4	INTERGENIC
X	7331220	X_7331220_SNP [dm3] X_7437187_SNP [dm6]	C	A	5.433e^-9	8.492e^-4	INTERGENIC
X	7329536	X_7329536_SNP [dm3] X_7435503_SNP [dm6]	T	C	9.356e^-9	0.001	INTERGENIC
X	7329519	X_7329519_SNP [dm3] X_7435486_SNP [dm6]	A	G	1.570e^-8	0.002	INTERGENIC
2R	12066229	2R_12066229_SNP [dm3] 2R_16178724_SNP [dm6]	G	A	2.481e^-8	0.003	UPSTREAM Lis-1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2R	12066234	2R_12066234_SNP [dm3] 2R_16178729_SNP [dm6]	T	A	2.766e^-8	0.003	UPSTREAM Lis-1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2R	12245315	2R_12245315_SNP [dm3] 2R_16357810_SNP [dm6]	G	A	3.052e^-8	0.003	DOWNSTREAM CR45322 EXON CR43416
2R	10674472	2R_10674472_SNP [dm3] 2R_14786967_SNP [dm6]	A	G	3.406e^-8	0.003	INTRON kn	TF binding site BDTNP1_TFBS_dl
2R	10675354	2R_10675354_SNP [dm3] 2R_14787849_SNP [dm6]	C	A	3.406e^-8	0.003	INTRON kn	TF binding site BDTNP1_TFBS_da
2R	10616116	2R_10616116_SNP [dm3] 2R_14728611_SNP [dm6]	G	A	3.496e^-8	0.003	INTERGENIC
2L	9261424	2L_9261424_SNP [dm3] 2L_9261424_SNP [dm6]	G	A	4.072e^-8	0.004	DOWNSTREAM CR45262 INTRON Ggamma30A
2R	15436212	2R_15436212_SNP [dm3] 2R_19548707_SNP [dm6]	C	T	7.897e^-8	0.007	INTRON sm
2L	9259902	2L_9259902_DEL [dm3] 2L_9259902_DEL [dm6]	CTCTTC	C	1.036e^-7	0.008	INTRON Ggamma30A
2L	4376521	2L_4376521_SNP [dm3] 2L_4376521_SNP [dm6]	A	T	1.451e^-7	0.01	INTRON Traf4	TF binding site mE1_TFBS_cad
2L	9346349	2L_9346349_SNP [dm3] 2L_9346349_SNP [dm6]	A	G	1.455e^-7	0.01	INTERGENIC
2R	15203387	2R_15203387_SNP [dm3] 2R_19315882_SNP [dm6]	T	C	1.476e^-7	0.01	INTRON Rgk1
2R	10700594	2R_10700594_SNP [dm3] 2R_14813089_SNP [dm6]	A	G	1.497e^-7	0.01	INTERGENIC
2L	9258652	2L_9258652_SNP [dm3] 2L_9258652_SNP [dm6]	A	T	1.728e^-7	0.011	INTRON Ggamma30A
X	11164117	X_11164117_SNP [dm3] X_11270084_SNP [dm6]	T	C	1.749e^-7	0.011	INTRON CG44422
2R	9632088	2R_9632088_INS [dm3] 2R_13744583_INS [dm6]	T	TT	2.210e^-7	0.014	INTRON fas
2R	10711040	2R_10711040_SNP [dm3] 2R_14823535_SNP [dm6]	G	A	2.503e^-7	0.015	DOWNSTREAM CR45329 INTERGENIC
2R	10676596	2R_10676596_SNP [dm3] 2R_14789091_SNP [dm6]	G	T	2.682e^-7	0.015	INTRON kn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	9637298	2R_9637298_SNP [dm3] 2R_13749793_SNP [dm6]	A	C	2.713e^-7	0.015	DOWNSTREAM fas INTERGENIC
2R	11328080	2R_11328080_SNP [dm3] 2R_15440575_SNP [dm6]	C	T	3.045e^-7	0.016	INTRON CG43729
2L	8363433	2L_8363433_DEL [dm3] 2L_8363433_DEL [dm6]	CC	C	3.099e^-7	0.016	UPSTREAM CG7627 DOWNSTREAM RpS13 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z
X	10941853	X_10941853_SNP [dm3] X_11047820_SNP [dm6]	G	T	3.144e^-7	0.016	SYNONYMOUS_CODING CG11160	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10688036	2R_10688036_SNP [dm3] 2R_14800531_SNP [dm6]	A	G	3.171e^-7	0.016	INTRON kn	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
2L	9253428	2L_9253428_INS [dm3] 2L_9253428_INS [dm6]	G	CACGACATAAAAACAAAAA...	3.409e^-7	0.017	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	9253430	2L_9253430_SNP [dm3] 2L_9253430_SNP [dm6]	T	A	3.519e^-7	0.017	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	10637038	2L_10637038_SNP [dm3] 2L_10637038_SNP [dm6]	T	C	3.996e^-7	0.019	INTRON CG7329
3L	12138468	3L_12138468_SNP [dm3] 3L_12145368_SNP [dm6]	T	C	4.351e^-7	0.02	INTRON CG5642	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_sens
2L	17054282	2L_17054282_SNP [dm3] 2L_17054282_SNP [dm6]	A	T	4.620e^-7	0.02	INTERGENIC
2L	9252708	2L_9252708_SNP [dm3] 2L_9252708_SNP [dm6]	G	A	4.787e^-7	0.02	SYNONYMOUS_CODING borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	11661653	2R_11661653_SNP [dm3] 2R_15774148_SNP [dm6]	G	C	4.834e^-7	0.02	INTRON Zasp52	TF binding site mE1_TFBS_chinmo
2L	9253421	2L_9253421_MNP [dm3] 2L_9253421_MNP [dm6]	CCC	GAA	4.856e^-7	0.02	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	9255723	2L_9255723_SNP [dm3] 2L_9255723_SNP [dm6]	T	C	5.022e^-7	0.02	UPSTREAM lectin-30A & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_z
2L	9254412	2L_9254412_SNP [dm3] 2L_9254412_SNP [dm6]	G	A	5.185e^-7	0.021	SYNONYMOUS_CODING lectin-30A
2R	9632106	2R_9632106_SNP [dm3] 2R_13744601_SNP [dm6]	A	T	5.370e^-7	0.021	INTRON fas
2R	15044694	2R_15044694_SNP [dm3] 2R_19157189_SNP [dm6]	A	C	5.567e^-7	0.021	INTRON ena
2R	7166346	2R_7166346_SNP [dm3] 2R_11278841_SNP [dm6]	G	A	5.863e^-7	0.022	UPSTREAM Cpr47Eg & 1 other DOWNSTREAM CG9067 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	11613733	2R_11613733_SNP [dm3] 2R_15726228_SNP [dm6]	G	C	5.973e^-7	0.022	INTERGENIC
2L	9252592	2L_9252592_SNP [dm3] 2L_9252592_SNP [dm6]	C	G	6.026e^-7	0.022	INTRON borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	12198042	2R_12198042_SNP [dm3] 2R_16310537_SNP [dm6]	C	T	6.522e^-7	0.023	INTRON Nox	TF binding site mE1_TFBS_chinmo
2L	9262205	2L_9262205_SNP [dm3] 2L_9262205_SNP [dm6]	G	C	6.621e^-7	0.023	INTRON Ggamma30A EXON CR45262
2L	9253529	2L_9253529_SNP [dm3] 2L_9253529_SNP [dm6]	C	A	7.052e^-7	0.024	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	7333551	X_7333551_SNP [dm3] X_7439518_SNP [dm6]	A	C	7.060e^-7	0.024	INTERGENIC
2L	10630550	2L_10630550_SNP [dm3] 2L_10630550_SNP [dm6]	C	T	7.217e^-7	0.024	SYNONYMOUS_CODING CG7329	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	10608610	2R_10608610_SNP [dm3] 2R_14721105_SNP [dm6]	C	G	7.511e^-7	0.024	INTERGENIC
2R	13191066	2R_13191066_SNP [dm3] 2R_17303561_SNP [dm6]	A	T	7.633e^-7	0.024	INTRON mbl
2R	10368189	2R_10368189_SNP [dm3] 2R_14480684_SNP [dm6]	G	C	7.781e^-7	0.024	UPSTREAM L INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1
2R	15044697	2R_15044697_INS [dm3] 2R_19157192_INS [dm6]	A	AT	7.944e^-7	0.024	INTRON ena
2R	15044705	2R_15044705_SNP [dm3] 2R_19157200_SNP [dm6]	T	C	8.384e^-7	0.025	INTRON ena
2L	9253255	2L_9253255_SNP [dm3] 2L_9253255_SNP [dm6]	A	G	8.415e^-7	0.025	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	9801356	3L_9801356_SNP [dm3] 3L_9808256_SNP [dm6]	A	G	8.909e^-7	0.026	UTR_3_PRIME CG32052	TF binding site BDTNP1_TFBS_twi
2L	19336830	2L_19336830_SNP [dm3] 2L_19336830_SNP [dm6]	G	T	9.348e^-7	0.026	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2L	9259041	2L_9259041_SNP [dm3] 2L_9259041_SNP [dm6]	T	A	9.469e^-7	0.026	INTRON Ggamma30A
2R	10700592	2R_10700592_SNP [dm3] 2R_14813087_SNP [dm6]	G	A	9.592e^-7	0.026	INTERGENIC
2L	19320516	2L_19320516_SNP [dm3] 2L_19320516_SNP [dm6]	T	C	9.601e^-7	0.026	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_Kr
2R	15044703	2R_15044703_SNP [dm3] 2R_19157198_SNP [dm6]	T	G	9.827e^-7	0.027	INTRON ena
2L	19313601	2L_19313601_SNP [dm3] 2L_19313601_SNP [dm6]	C	T	1.005e^-6	0.027	INTERGENIC	TF binding site mE1_TFBS_cad
2R	9632130	2R_9632130_SNP [dm3] 2R_13744625_SNP [dm6]	A	G	1.011e^-6	0.027	INTRON fas
2L	9263647	2L_9263647_SNP [dm3] 2L_9263647_SNP [dm6]	G	A	1.068e^-6	0.028	UPSTREAM CR45262 INTRON Ggamma30A	TF binding site mE1_TFBS_inv
2R	11957750	2R_11957750_SNP [dm3] 2R_16070245_SNP [dm6]	G	A	1.073e^-6	0.028	INTERGENIC	TF binding site mE1_TFBS_cad
2L	9259372	2L_9259372_SNP [dm3] 2L_9259372_SNP [dm6]	C	A	1.137e^-6	0.028	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2R	10700192	2R_10700192_SNP [dm3] 2R_14812687_SNP [dm6]	G	C	1.158e^-6	0.028	INTERGENIC	regulatory region REDfly_CRMs
2L	9253367	2L_9253367_SNP [dm3] 2L_9253367_SNP [dm6]	A	T	1.176e^-6	0.028	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	9260169	2L_9260169_SNP [dm3] 2L_9260169_SNP [dm6]	T	C	1.187e^-6	0.028	INTRON Ggamma30A
2L	5483007	2L_5483007_SNP [dm3] 2L_5483007_SNP [dm6]	A	G	1.210e^-6	0.028	INTERGENIC
2L	9261094	2L_9261094_SNP [dm3] 2L_9261094_SNP [dm6]	C	T	1.210e^-6	0.028	DOWNSTREAM CR45262 INTRON Ggamma30A
2L	9261095	2L_9261095_SNP [dm3] 2L_9261095_SNP [dm6]	C	T	1.210e^-6	0.028	DOWNSTREAM CR45262 INTRON Ggamma30A
2L	9257288	2L_9257288_SNP [dm3] 2L_9257288_SNP [dm6]	C	T	1.215e^-6	0.028	INTRON Ggamma30A	TF binding site BDTNP1_TFBS_z mE1_TFBS_Trl
2L	9261448	2L_9261448_SNP [dm3] 2L_9261448_SNP [dm6]	T	A	1.227e^-6	0.028	DOWNSTREAM CR45262 INTRON Ggamma30A
3L	481733	3L_481733_SNP [dm3] 3L_481733_SNP [dm6]	T	C	1.248e^-6	0.028	INTRON klar
2R	10608749	2R_10608749_SNP [dm3] 2R_14721244_SNP [dm6]	C	G	1.283e^-6	0.029	INTERGENIC	TF binding site mE1_TFBS_inv
2L	11969832	2L_11969832_SNP [dm3] 2L_11969832_SNP [dm6]	T	A	1.296e^-6	0.029	INTRON CR43314	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3L	9376172	3L_9376172_SNP [dm3] 3L_9383072_SNP [dm6]	G	A	1.330e^-6	0.029	UPSTREAM Hsp27 DOWNSTREAM Hsp23 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	9262563	2L_9262563_SNP [dm3] 2L_9262563_SNP [dm6]	A	G	1.344e^-6	0.029	INTRON Ggamma30A EXON CR45262
2R	13671439	2R_13671439_SNP [dm3] 2R_17783934_SNP [dm6]	T	A	1.376e^-6	0.029	UPSTREAM mir-31a INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	17060671	2L_17060671_SNP [dm3] 2L_17060671_SNP [dm6]	G	A	1.424e^-6	0.03	INTERGENIC
X	11031712	X_11031712_SNP [dm3] X_11137679_SNP [dm6]	T	C	1.452e^-6	0.03	UPSTREAM Klp10A & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Ubx
2L	9259433	2L_9259433_SNP [dm3] 2L_9259433_SNP [dm6]	C	T	1.479e^-6	0.03	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2L	6677459	2L_6677459_SNP [dm3] 2L_6677459_SNP [dm6]	T	C	1.515e^-6	0.031	SYNONYMOUS_CODING CG11329 UPSTREAM cort DOWNSTREAM Nhe3	TF binding site mE1_TFBS_HSA mE1_TFBS_ttk
2R	15272659	2R_15272659_SNP [dm3] 2R_19385154_SNP [dm6]	A	C	1.517e^-6	0.031	UPSTREAM CG10081 DOWNSTREAM CG10073 INTERGENIC
2R	18587506	2R_18587506_SNP [dm3] 2R_22700001_SNP [dm6]	G	A	1.646e^-6	0.033	UTR_5_PRIME robo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
2L	9259419	2L_9259419_SNP [dm3] 2L_9259419_SNP [dm6]	C	G	1.655e^-6	0.033	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2R	14706594	2R_14706594_DEL [dm3] 2R_18819089_DEL [dm6]	TTG	T	1.772e^-6	0.034	UPSTREAM Phb2 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	9253293	2L_9253293_SNP [dm3] 2L_9253293_SNP [dm6]	C	G	1.775e^-6	0.034	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	15272650	2R_15272650_DEL [dm3] 2R_19385145_DEL [dm6]	CCA	C	1.893e^-6	0.036	UPSTREAM CG10081 DOWNSTREAM CG10073 INTERGENIC
2L	19332081	2L_19332081_SNP [dm3] 2L_19332081_SNP [dm6]	C	A	1.893e^-6	0.036	INTERGENIC
2R	14959850	2R_14959850_SNP [dm3] 2R_19072345_SNP [dm6]	T	A	1.909e^-6	0.036	INTRON 5-HT1A
2R	11338614	2R_11338614_SNP [dm3] 2R_15451109_SNP [dm6]	C	A	1.929e^-6	0.036	INTRON CG43729	TF binding site mE1_TFBS_chinmo
3L	12136180	3L_12136180_DEL [dm3] 3L_12143080_DEL [dm6]	TA	T	1.981e^-6	0.036	UTR_3_PRIME RhoGAP68F DOWNSTREAM CG5642
2L	9259491	2L_9259491_SNP [dm3] 2L_9259491_SNP [dm6]	G	C	1.983e^-6	0.036	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2R	10513562	2R_10513562_SNP [dm3] 2R_14626057_SNP [dm6]	T	C	1.986e^-6	0.036	INTERGENIC
2R	10608696	2R_10608696_SNP [dm3] 2R_14721191_SNP [dm6]	G	A	1.993e^-6	0.036	INTERGENIC
2R	10585509	2R_10585509_SNP [dm3] 2R_14698004_SNP [dm6]	G	T	2.008e^-6	0.036	INTRON mspo
2R	13191061	2R_13191061_SNP [dm3] 2R_17303556_SNP [dm6]	T	A	2.151e^-6	0.038	INTRON mbl
2R	13141080	2R_13141080_SNP [dm3] 2R_17253575_SNP [dm6]	A	G	2.173e^-6	0.038	DOWNSTREAM CR43660 INTRON mbl	TF binding site BDTNP1_TFBS_twi
2L	19337989	2L_19337989_SNP [dm3] 2L_19337989_SNP [dm6]	C	G	2.188e^-6	0.038	DOWNSTREAM dnt INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	11344121	2R_11344121_SNP [dm3] 2R_15456616_SNP [dm6]	C	T	2.224e^-6	0.038	INTRON CG43729	TF binding site mE1_TFBS_chinmo
2L	19328395	2L_19328395_SNP [dm3] 2L_19328395_SNP [dm6]	A	G	2.270e^-6	0.038	DOWNSTREAM CR45258 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_sens
2R	10633983	2R_10633983_SNP [dm3] 2R_14746478_SNP [dm6]	A	G	2.415e^-6	0.04	UTR_3_PRIME Dro UPSTREAM AttA DOWNSTREAM Dro
2L	14460134	2L_14460134_SNP [dm3] 2L_14460134_SNP [dm6]	T	A	2.449e^-6	0.041	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	9519763	2R_9519763_SNP [dm3] 2R_13632258_SNP [dm6]	C	T	2.530e^-6	0.042	INTRON fas
2R	11342690	2R_11342690_SNP [dm3] 2R_15455185_SNP [dm6]	C	A	2.575e^-6	0.042	INTRON CG43729
X	16185356	X_16185356_SNP [dm3] X_16291323_SNP [dm6]	G	T	2.736e^-6	0.044	INTRON caz
2R	10608747	2R_10608747_SNP [dm3] 2R_14721242_SNP [dm6]	C	T	2.773e^-6	0.044	INTERGENIC	TF binding site mE1_TFBS_inv
2L	10872458	2L_10872458_SNP [dm3] 2L_10872458_SNP [dm6]	C	T	2.782e^-6	0.044	DOWNSTREAM CR45454 INTERGENIC
2R	14712384	2R_14712384_SNP [dm3] 2R_18824879_SNP [dm6]	T	C	2.790e^-6	0.044	INTRON CG15097	TF binding site mE1_TFBS_chinmo
2L	14950468	2L_14950468_SNP [dm3] 2L_14950468_SNP [dm6]	A	T	2.870e^-6	0.045	INTRON CG42313
2R	11327675	2R_11327675_SNP [dm3] 2R_15440170_SNP [dm6]	A	G	3.065e^-6	0.048	INTRON CG43729
2L	12613392	2L_12613392_SNP [dm3] 2L_12613392_SNP [dm6]	C	T	3.221e^-6	0.048	INTRON nub & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2R	10453850	2R_10453850_SNP [dm3] 2R_14566345_SNP [dm6]	T	C	3.221e^-6	0.048	INTRON ttv
X	8368451	X_8368451_SNP [dm3] X_8474418_SNP [dm6]	C	A	3.223e^-6	0.048	NON_SYNONYMOUS_CODING Cp7Fb INTRON CG33223 & 1 other
2L	9198590	2L_9198590_SNP [dm3] 2L_9198590_SNP [dm6]	A	G	3.225e^-6	0.048	INTRON tai
2L	5724771	2L_5724771_SNP [dm3] 2L_5724771_SNP [dm6]	G	T	3.326e^-6	0.05	START_GAINED CG11030 UTR_5_PRIME CG11030 DOWNSTREAM sip1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
2R	10704614	2R_10704614_SNP [dm3] 2R_14817109_SNP [dm6]	G	A	3.404e^-6	0.05	DOWNSTREAM CG10202 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
X	1435718	X_1435718_DEL [dm3] X_1541685_DEL [dm6]	GCTGGCCTATGCGAGTGGAT...	G	3.460e^-6	0.05	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2R	11342856	2R_11342856_SNP [dm3] 2R_15455351_SNP [dm6]	T	C	3.513e^-6	0.05	INTRON CG43729
2R	7156448	2R_7156448_SNP [dm3] 2R_11268943_SNP [dm6]	T	G	3.546e^-6	0.05	INTRON Cpr47Ef
2R	17819140	2R_17819140_SNP [dm3] 2R_21931635_SNP [dm6]	T	C	3.550e^-6	0.05	INTRON Fili
3L	6518570	3L_6518570_DEL [dm3] 3L_6525470_DEL [dm6]	GCTGCCTG	G	3.551e^-6	0.05	INTRON sfl
2R	13191970	2R_13191970_SNP [dm3] 2R_17304465_SNP [dm6]	C	T	3.846e^-6	0.054	INTRON mbl
2L	9662613	2L_9662613_SNP [dm3] 2L_9662613_SNP [dm6]	A	C	3.876e^-6	0.054	INTERGENIC
X	9619832	X_9619832_SNP [dm3] X_9725799_SNP [dm6]	A	T	3.893e^-6	0.054	INTERGENIC
X	5719856	X_5719856_SNP [dm3] X_5825823_SNP [dm6]	A	G	3.919e^-6	0.054	INTRON CG15765
2R	11342852	2R_11342852_SNP [dm3] 2R_15455347_SNP [dm6]	C	A	3.919e^-6	0.054	INTRON CG43729
X	12045411	X_12045411_SNP [dm3] X_12151378_SNP [dm6]	T	G	4.031e^-6	0.055	INTRON Ten-a
2R	20164042	2R_20164042_SNP [dm3] 2R_24276519_SNP [dm6]	G	T	4.066e^-6	0.055	INTRON nvy	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2R	10260546	2R_10260546_SNP [dm3] 2R_14373041_SNP [dm6]	G	A	4.164e^-6	0.056	UPSTREAM Obp50d DOWNSTREAM CG34185 & 2 others INTERGENIC
2L	9259413	2L_9259413_SNP [dm3] 2L_9259413_SNP [dm6]	G	C	4.201e^-6	0.056	UTR_5_PRIME Ggamma30A INTRON Ggamma30A
2L	19339933	2L_19339933_SNP [dm3] 2L_19339933_SNP [dm6]	G	C	4.230e^-6	0.056	NON_SYNONYMOUS_CODING dnt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	11341764	2R_11341764_SNP [dm3] 2R_15454259_SNP [dm6]	G	A	4.287e^-6	0.056	INTRON CG43729
2R	10585346	2R_10585346_SNP [dm3] 2R_14697841_SNP [dm6]	C	T	4.293e^-6	0.056	INTRON mspo
2R	11341457	2R_11341457_SNP [dm3] 2R_15453952_SNP [dm6]	G	A	4.428e^-6	0.057	INTRON CG43729
3L	12138648	3L_12138648_SNP [dm3] 3L_12145548_SNP [dm6]	T	C	4.445e^-6	0.057	UPSTREAM Nrx-IV INTRON CG5642	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
2L	9258668	2L_9258668_SNP [dm3] 2L_9258668_SNP [dm6]	C	T	4.496e^-6	0.057	INTRON Ggamma30A
X	4561087	X_4561087_SNP [dm3] X_4667054_SNP [dm6]	C	G	4.557e^-6	0.058	UPSTREAM CG3009 DOWNSTREAM rap INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_disco mE1_TFBS_HSA
2R	13192027	2R_13192027_SNP [dm3] 2R_17304522_SNP [dm6]	C	T	4.586e^-6	0.058	INTRON mbl
2R	3021801	2R_3021801_SNP [dm3] 2R_7134296_SNP [dm6]	T	C	4.788e^-6	0.06	UPSTREAM CR44443 INTERGENIC
3R	13469273	3R_13469273_SNP [dm3] 3R_17643551_SNP [dm6]	T	C	4.805e^-6	0.06	INTRON CG43175
2R	4969288	2R_4969288_SNP [dm3] 2R_9081783_SNP [dm6]	G	A	4.912e^-6	0.061	SYNONYMOUS_CODING CG8083 UPSTREAM CNT1
2R	4969919	2R_4969919_SNP [dm3] 2R_9082414_SNP [dm6]	A	C	4.964e^-6	0.061	UTR_5_PRIME CNT1 DOWNSTREAM CG8083
2R	10621372	2R_10621372_SNP [dm3] 2R_14733867_SNP [dm6]	C	A	5.260e^-6	0.064	INTERGENIC
X	11314332	X_11314332_SNP [dm3] X_11420299_SNP [dm6]	G	C	5.269e^-6	0.064	INTERGENIC
2R	11342721	2R_11342721_SNP [dm3] 2R_15455216_SNP [dm6]	T	A	5.404e^-6	0.065	INTRON CG43729
2R	3021673	2R_3021673_SNP [dm3] 2R_7134168_SNP [dm6]	T	G	5.471e^-6	0.065	UPSTREAM CR44443 INTERGENIC
2L	4271986	2L_4271986_SNP [dm3] 2L_4271986_SNP [dm6]	G	A	5.501e^-6	0.065	INTERGENIC
X	10941918	X_10941918_SNP [dm3] X_11047885_SNP [dm6]	A	T	5.552e^-6	0.065	NON_SYNONYMOUS_CODING CG11160	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5720687	2L_5720687_SNP [dm3] 2L_5720687_SNP [dm6]	T	C	5.674e^-6	0.066	UPSTREAM sip1 & 1 other INTRON CG11149
2L	9079266	2L_9079266_SNP [dm3] 2L_9079266_SNP [dm6]	T	C	5.688e^-6	0.066	INTERGENIC
2R	7982903	2R_7982903_SNP [dm3] 2R_12095398_SNP [dm6]	T	C	5.690e^-6	0.066	INTRON jeb
2R	4966408	2R_4966408_SNP [dm3] 2R_9078903_SNP [dm6]	A	T	5.804e^-6	0.067	START_GAINED CG8083 UTR_5_PRIME CG8083
2L	19326852	2L_19326852_SNP [dm3] 2L_19326852_SNP [dm6]	C	T	5.904e^-6	0.068	UPSTREAM CR45258 DOWNSTREAM CR45700 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr
3L	6752628	3L_6752628_DEL [dm3] 3L_6759528_DEL [dm6]	AAGTGGGTGAGCCA...	A	5.988e^-6	0.068	INTRON CG32392
2R	10676540	2R_10676540_SNP [dm3] 2R_14789035_SNP [dm6]	C	T	6.172e^-6	0.069	INTRON kn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	15060790	2R_15060790_DEL [dm3] 2R_19173285_DEL [dm6]	TCCT	T	6.174e^-6	0.069	INTRON CG10737
X	4561091	X_4561091_SNP [dm3] X_4667058_SNP [dm6]	C	A	6.246e^-6	0.07	UPSTREAM CG3009 DOWNSTREAM rap INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_disco mE1_TFBS_HSA
2R	3052208	2R_3052208_SNP [dm3] 2R_7164703_SNP [dm6]	G	C	6.347e^-6	0.07	INTRON pk
2R	10193310	2R_10193310_SNP [dm3] 2R_14305805_SNP [dm6]	G	A	6.348e^-6	0.07	INTERGENIC
2R	9518636	2R_9518636_SNP [dm3] 2R_13631131_SNP [dm6]	C	G	6.412e^-6	0.07	INTRON fas
2R	4961527	2R_4961527_SNP [dm3] 2R_9074022_SNP [dm6]	T	C	6.489e^-6	0.07	INTRON ana
2L	10630373	2L_10630373_SNP [dm3] 2L_10630373_SNP [dm6]	G	A	6.490e^-6	0.07	SYNONYMOUS_CODING CG7329	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	16350759	3L_16350759_SNP [dm3] 3L_16357659_SNP [dm6]	A	G	6.495e^-6	0.07	INTRON CG45057
2R	10608268	2R_10608268_SNP [dm3] 2R_14720763_SNP [dm6]	T	C	6.552e^-6	0.07	INTERGENIC
2R	10585596	2R_10585596_SNP [dm3] 2R_14698091_SNP [dm6]	A	T	6.577e^-6	0.07	INTRON mspo
X	1426921	X_1426921_SNP [dm3] X_1532888_SNP [dm6]	C	A	6.756e^-6	0.071	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
X	21293592	X_21293592_SNP [dm3] X_21422565_SNP [dm6]	T	C	6.756e^-6	0.071	UTR_3_PRIME CG42343	TF binding site mE1_TFBS_cnc
2L	18924548	2L_18924548_SNP [dm3] 2L_18924548_SNP [dm6]	C	G	6.760e^-6	0.071	INTRON ssp3	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	13191083	2R_13191083_SNP [dm3] 2R_17303578_SNP [dm6]	C	A	6.874e^-6	0.071	INTRON mbl
2R	11342070	2R_11342070_SNP [dm3] 2R_15454565_SNP [dm6]	C	G	6.892e^-6	0.071	INTRON CG43729
2R	7841421	2R_7841421_SNP [dm3] 2R_11953916_SNP [dm6]	G	T	7.030e^-6	0.072	INTRON CG13188
2R	15220811	2R_15220811_SNP [dm3] 2R_19333306_SNP [dm6]	C	G	7.038e^-6	0.072	INTRON Rgk1 & 1 other
2R	14959664	2R_14959664_DEL [dm3] 2R_19072159_DEL [dm6]	CAAACACACACATCAAAGCA...	C	7.112e^-6	0.072	INTRON 5-HT1A
2R	10608631	2R_10608631_SNP [dm3] 2R_14721126_SNP [dm6]	G	A	7.143e^-6	0.072	INTERGENIC
2L	13948725	2L_13948725_SNP [dm3] 2L_13948725_SNP [dm6]	G	T	7.304e^-6	0.074	INTRON Ance-3
2R	10460322	2R_10460322_SNP [dm3] 2R_14572817_SNP [dm6]	C	A	7.402e^-6	0.074	SYNONYMOUS_CODING LamC INTRON ttv
2R	10672495	2R_10672495_SNP [dm3] 2R_14784990_SNP [dm6]	C	A	7.458e^-6	0.074	INTRON kn
2L	9157209	2L_9157209_SNP [dm3] 2L_9157209_SNP [dm6]	C	T	7.593e^-6	0.075	INTRON CG32982
2R	10572638	2R_10572638_SNP [dm3] 2R_14685133_SNP [dm6]	A	G	7.641e^-6	0.075	INTRON mspo
2R	10585592	2R_10585592_SNP [dm3] 2R_14698087_SNP [dm6]	T	A	7.664e^-6	0.075	INTRON mspo
2L	19315233	2L_19315233_SNP [dm3] 2L_19315233_SNP [dm6]	C	T	7.698e^-6	0.075	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	20021154	2L_20021154_SNP [dm3] 2L_20021154_SNP [dm6]	C	T	7.707e^-6	0.075	INTERGENIC
2R	10709770	2R_10709770_SNP [dm3] 2R_14822265_SNP [dm6]	C	T	7.727e^-6	0.075	INTERGENIC
2R	10788315	2R_10788315_SNP [dm3] 2R_14900810_SNP [dm6]	G	A	7.955e^-6	0.076	NON_SYNONYMOUS_CODING Cyp317a1 DOWNSTREAM CG10249	TF binding site mE1_TFBS_sens
2L	18000246	2L_18000246_SNP [dm3] 2L_18000246_SNP [dm6]	A	G	8.033e^-6	0.076	INTERGENIC
2L	17927212	2L_17927212_SNP [dm3] 2L_17927212_SNP [dm6]	T	A	8.081e^-6	0.076	INTERGENIC
2L	9252480	2L_9252480_SNP [dm3] 2L_9252480_SNP [dm6]	A	G	8.104e^-6	0.076	INTRON borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9252499	2L_9252499_SNP [dm3] 2L_9252499_SNP [dm6]	A	G	8.104e^-6	0.076	INTRON borr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	14702852	2R_14702852_SNP [dm3] 2R_18815347_SNP [dm6]	G	C	8.198e^-6	0.077	UTR_5_PRIME CG15096 UPSTREAM CG15096 EXON CR43418
3L	9699777	3L_9699777_SNP [dm3] 3L_9706677_SNP [dm6]	T	C	8.279e^-6	0.077	NON_SYNONYMOUS_CODING CG16711	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	11909834	2R_11909834_SNP [dm3] 2R_16022329_SNP [dm6]	C	T	8.305e^-6	0.077	SYNONYMOUS_CODING CG8399
2R	9352211	2R_9352211_SNP [dm3] 2R_13464706_SNP [dm6]	T	C	8.503e^-6	0.078	INTRON arr	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	9877026	2L_9877026_SNP [dm3] 2L_9877026_SNP [dm6]	C	T	8.521e^-6	0.078	INTRON nAChRalpha6
2R	17246588	2R_17246588_INS [dm3] 2R_21359083_INS [dm6]	T	TTT	8.651e^-6	0.079	SPLICE_SITE_REGION cv-2 INTRON cv-2	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	19331009	2L_19331009_SNP [dm3] 2L_19331009_SNP [dm6]	T	C	8.849e^-6	0.081	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	9082465	2L_9082465_SNP [dm3] 2L_9082465_SNP [dm6]	A	T	9.141e^-6	0.083	INTERGENIC
3L	1000080	3L_1000080_SNP [dm3] 3L_1000080_SNP [dm6]	G	A	9.330e^-6	0.084	INTRON trio
2R	14159839	2R_14159839_SNP [dm3] 2R_18272334_SNP [dm6]	G	T	9.354e^-6	0.084	INTERGENIC	TF binding site mE1_TFBS_chinmo
X	12045414	X_12045414_SNP [dm3] X_12151381_SNP [dm6]	T	A	9.425e^-6	0.084	INTRON Ten-a
3R	22760102	3R_22760102_DEL [dm3] 3R_26934380_DEL [dm6]	TT	T	9.564e^-6	0.085	INTRON sda
2R	10294461	2R_10294461_SNP [dm3] 2R_14406956_SNP [dm6]	T	A	9.588e^-6	0.085	INTERGENIC
2L	6001044	2L_6001044_SNP [dm3] 2L_6001044_SNP [dm6]	G	A	9.607e^-6	0.085	SYNONYMOUS_CODING Tsp26A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
X	6898800	X_6898800_SNP [dm3] X_7004767_SNP [dm6]	T	A	9.783e^-6	0.086	START_GAINED Inx7 UTR_5_PRIME Inx7 DOWNSTREAM Inx2
3L	3632572	3L_3632572_SNP [dm3] 3L_3632572_SNP [dm6]	G	A	9.827e^-6	0.086	INTRON dar1	TF binding site BDTNP1_TFBS_dl
2L	8293295	2L_8293295_SNP [dm3] 2L_8293295_SNP [dm6]	G	A	9.887e^-6	0.086	INTRON Btk29A
X	10918144	X_10918144_SNP [dm3] X_11024111_SNP [dm6]	A	G	9.912e^-6	0.086	INTRON CG42339
2R	10441975	2R_10441975_SNP [dm3] 2R_14554470_SNP [dm6]	T	C	1.001e^-5	0.086	UPSTREAM CG43919 INTRON ttv
2L	9242343	2L_9242343_SNP [dm3] 2L_9242343_SNP [dm6]	G	A	1.015e^-5	0.087	SYNONYMOUS_CODING tai	TF binding site mE1_TFBS_chinmo
2R	11338539	2R_11338539_SNP [dm3] 2R_15451034_SNP [dm6]	G	A	1.020e^-5	0.087	INTRON CG43729	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	13191873	2R_13191873_SNP [dm3] 2R_17304368_SNP [dm6]	G	A	1.024e^-5	0.087	INTRON mbl
X	1458441	X_1458441_SNP [dm3] X_1564408_SNP [dm6]	A	G	1.033e^-5	0.087	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2R	13323944	2R_13323944_SNP [dm3] 2R_17436439_SNP [dm6]	G	A	1.034e^-5	0.087	INTRON EDTP	TF binding site BDTNP1_TFBS_dl
X	7724130	X_7724130_SNP [dm3] X_7830097_SNP [dm6]	T	G	1.069e^-5	0.089	INTRON CG1402
2R	17809331	2R_17809331_SNP [dm3] 2R_21921826_SNP [dm6]	G	A	1.075e^-5	0.09	INTRON Fili	TF binding site mE1_TFBS_inv
X	8403059	X_8403059_SNP [dm3] X_8509026_SNP [dm6]	A	C	1.079e^-5	0.09	UPSTREAM CG33181 INTRON CG33181
X	1458439	X_1458439_SNP [dm3] X_1564406_SNP [dm6]	G	A	1.092e^-5	0.09	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
X	13265926	X_13265926_SNP [dm3] X_13371893_SNP [dm6]	C	T	1.096e^-5	0.09	INTRON CG1640	TF binding site BDTNP1_TFBS_dl
X	13681504	X_13681504_SNP [dm3] X_13787471_SNP [dm6]	A	T	1.108e^-5	0.091	INTRON inaE	TF binding site mE1_TFBS_kn
2R	10188073	2R_10188073_SNP [dm3] 2R_14300568_SNP [dm6]	C	A	1.114e^-5	0.091	NON_SYNONYMOUS_CODING tej DOWNSTREAM Ih
X	10943443	X_10943443_SNP [dm3] X_11049410_SNP [dm6]	C	A	1.117e^-5	0.091	UTR_3_PRIME CG11160
2L	20791136	2L_20791136_SNP [dm3] 2L_20791136_SNP [dm6]	G	T	1.122e^-5	0.091	INTRON vari
2R	801219	2R_801219_SNP [dm3] 2R_4913714_SNP [dm6]	A	C	1.134e^-5	0.091	INTERGENIC	transposable element FlyBase
2R	7156405	2R_7156405_SNP [dm3] 2R_11268900_SNP [dm6]	A	T	1.142e^-5	0.091	SYNONYMOUS_CODING Cpr47Ef
X	8368507	X_8368507_SNP [dm3] X_8474474_SNP [dm6]	A	G	1.152e^-5	0.091	SYNONYMOUS_CODING Cp7Fb INTRON CG33223 & 1 other
2L	9440069	2L_9440069_SNP [dm3] 2L_9440069_SNP [dm6]	T	C	1.153e^-5	0.091	NON_SYNONYMOUS_CODING CG33723 INTRON numb
2R	13710402	2R_13710402_SNP [dm3] 2R_17822897_SNP [dm6]	A	G	1.155e^-5	0.091	UPSTREAM grh INTRON grh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi transposable element FlyBase
2R	10747516	2R_10747516_SNP [dm3] 2R_14860011_SNP [dm6]	C	A	1.161e^-5	0.091	NON_SYNONYMOUS_CODING U3-55K DOWNSTREAM Inr-a	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	15027173	2R_15027173_SNP [dm3] 2R_19139668_SNP [dm6]	C	T	1.166e^-5	0.091	INTRON CG15111	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	16173602	3L_16173602_INS [dm3] 3L_16180502_INS [dm6]	A	AC	1.177e^-5	0.092	INTERGENIC	TF binding site mE1_TFBS_inv
X	11314428	X_11314428_INS [dm3] X_11420395_INS [dm6]	A	AA	1.188e^-5	0.092	INTERGENIC
2L	5723313	2L_5723313_SNP [dm3] 2L_5723313_SNP [dm6]	G	T	1.216e^-5	0.094	NON_SYNONYMOUS_CODING sip1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
X	10683780	X_10683780_SNP [dm3] X_10789747_SNP [dm6]	T	C	1.226e^-5	0.095	UTR_3_PRIME Imp
2R	11338645	2R_11338645_SNP [dm3] 2R_15451140_SNP [dm6]	G	A	1.243e^-5	0.095	INTRON CG43729	TF binding site mE1_TFBS_chinmo
2L	9253432	2L_9253432_SNP [dm3] 2L_9253432_SNP [dm6]	A	C	1.245e^-5	0.095	UPSTREAM borr DOWNSTREAM lectin-30A INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	5724353	2L_5724353_SNP [dm3] 2L_5724353_SNP [dm6]	T	A	1.249e^-5	0.095	UPSTREAM CG11030 DOWNSTREAM sip1 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
X	12045480	X_12045480_SNP [dm3] X_12151447_SNP [dm6]	T	G	1.251e^-5	0.095	INTRON Ten-a
2L	9080906	2L_9080906_SNP [dm3] 2L_9080906_SNP [dm6]	A	G	1.260e^-5	0.095	INTERGENIC
X	7724119	X_7724119_SNP [dm3] X_7830086_SNP [dm6]	G	T	1.260e^-5	0.095	INTRON CG1402
X	7724133	X_7724133_DEL [dm3] X_7830100_DEL [dm6]	CATG	GT	1.260e^-5	0.095	INTRON CG1402
2R	7156420	2R_7156420_SNP [dm3] 2R_11268915_SNP [dm6]	A	T	1.285e^-5	0.096	SPLICE_SITE_REGION Cpr47Ef INTRON Cpr47Ef
2R	10186537	2R_10186537_SNP [dm3] 2R_14299032_SNP [dm6]	C	A	1.288e^-5	0.096	UTR_3_PRIME Ih DOWNSTREAM Ih
X	9609657	X_9609657_SNP [dm3] X_9715624_SNP [dm6]	G	T	1.300e^-5	0.096	INTERGENIC
X	7724131	X_7724131_SNP [dm3] X_7830098_SNP [dm6]	T	A	1.300e^-5	0.096	INTRON CG1402
2R	10344154	2R_10344154_SNP [dm3] 2R_14456649_SNP [dm6]	C	A	1.316e^-5	0.097	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10725342	X_10725342_SNP [dm3] X_10831309_SNP [dm6]	C	G	1.319e^-5	0.097	INTERGENIC
X	9584882	X_9584882_SNP [dm3] X_9690849_SNP [dm6]	C	G	1.337e^-5	0.098	DOWNSTREAM CR44016 INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	12370631	2R_12370631_SNP [dm3] 2R_16483126_SNP [dm6]	G	A	1.355e^-5	0.098	INTERGENIC
2L	21836541	2L_21836541_INS [dm3] 2L_21836541_INS [dm6]	TA	CTCG	1.374e^-5	0.098	UTR_3_PRIME tsh	TF binding site BDTNP1_TFBS_da
2R	13191058	2R_13191058_SNP [dm3] 2R_17303553_SNP [dm6]	G	A	1.379e^-5	0.098	INTRON mbl
2L	5719453	2L_5719453_SNP [dm3] 2L_5719453_SNP [dm6]	T	A	1.382e^-5	0.098	INTRON CG11149
2L	5725635	2L_5725635_DEL [dm3] 2L_5725635_DEL [dm6]	TT	T	1.383e^-5	0.098	DOWNSTREAM CG14006 INTRON CG11030
2R	10711112	2R_10711112_SNP [dm3] 2R_14823607_SNP [dm6]	C	A	1.386e^-5	0.098	EXON CR45329
2R	11342850	2R_11342850_SNP [dm3] 2R_15455345_SNP [dm6]	C	T	1.393e^-5	0.098	INTRON CG43729
2R	11055979	2R_11055979_SNP [dm3] 2R_15168474_SNP [dm6]	T	G	1.394e^-5	0.098	INTRON igl
2L	5723845	2L_5723845_SNP [dm3] 2L_5723845_SNP [dm6]	T	C	1.396e^-5	0.098	UTR_3_PRIME sip1 UPSTREAM CG11030 DOWNSTREAM sip1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	12872450	3R_12872450_SNP [dm3] 3R_17046728_SNP [dm6]	C	T	1.416e^-5	0.099	SYNONYMOUS_CODING Patr-1
X	12045427	X_12045427_SNP [dm3] X_12151394_SNP [dm6]	C	T	1.418e^-5	0.099	INTRON Ten-a
X	8368525	X_8368525_SNP [dm3] X_8474492_SNP [dm6]	A	T	1.423e^-5	0.099	SYNONYMOUS_CODING Cp7Fb INTRON CG33223 & 1 other
2R	4965618	2R_4965618_SNP [dm3] 2R_9078113_SNP [dm6]	A	T	1.448e^-5	0.1	UPSTREAM CG8083 DOWNSTREAM ana INTERGENIC
2R	11364415	2R_11364415_SNP [dm3] 2R_15476910_SNP [dm6]	G	T	1.451e^-5	0.1	INTRON CG8180
2R	10953972	2R_10953972_INS [dm3] 2R_15066467_INS [dm6]	T	GGTTTGGC	1.451e^-5	0.1	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	11343440	2R_11343440_SNP [dm3] 2R_15455935_SNP [dm6]	C	T	1.460e^-5	0.1	INTRON CG43729	TF binding site mE1_TFBS_chinmo
2R	10935810	2R_10935810_SNP [dm3] 2R_15048305_SNP [dm6]	C	G	1.482e^-5	0.101	INTERGENIC
2L	8385348	2L_8385348_SNP [dm3] 2L_8385348_SNP [dm6]	T	C	1.483e^-5	0.101	UPSTREAM CG13384 INTRON CG13384	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3583530	2R_3583530_INS [dm3] 2R_7696025_INS [dm6]	C	CGGCTG	1.492e^-5	0.101	UPSTREAM CG1399 INTRON CG1399
2R	14706601	2R_14706601_DEL [dm3] 2R_18819096_DEL [dm6]	TTTAAACCAAGCCGTTATCA...	T	1.502e^-5	0.102	UPSTREAM Phb2 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	12012548	2R_12012548_SNP [dm3] 2R_16125043_SNP [dm6]	A	G	1.515e^-5	0.102	UTR_5_PRIME spin DOWNSTREAM CG30095	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3L	2263668	3L_2263668_SNP [dm3] 3L_2263668_SNP [dm6]	T	A	1.522e^-5	0.102	NON_SYNONYMOUS_CODING ecd DOWNSTREAM CG13807	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	16954708	2L_16954708_SNP [dm3] 2L_16954708_SNP [dm6]	A	G	1.525e^-5	0.102	INTERGENIC
2R	16027066	2R_16027066_SNP [dm3] 2R_20139561_SNP [dm6]	C	T	1.538e^-5	0.103	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	16027278	2R_16027278_SNP [dm3] 2R_20139773_SNP [dm6]	C	G	1.545e^-5	0.103	INTERGENIC
2R	13870496	2R_13870496_DEL [dm3] 2R_17982991_DEL [dm6]	TAAGATGACAACTTTGTTGT...	T	1.548e^-5	0.103	INTRON dpr13
X	9745943	X_9745943_SNP [dm3] X_9851910_SNP [dm6]	T	C	1.564e^-5	0.103	UTR_3_PRIME CG32698
2R	13870479	2R_13870479_DEL [dm3] 2R_17982974_DEL [dm6]	ATACACGACTCAAT...	A	1.570e^-5	0.103	INTRON dpr13
2L	8390046	2L_8390046_SNP [dm3] 2L_8390046_SNP [dm6]	G	A	1.572e^-5	0.103	UTR_3_PRIME CG42820 UPSTREAM CG42819 DOWNSTREAM snRNA:U6atac:29B	TF binding site BDTNP1_TFBS_twi
2L	6673894	2L_6673894_SNP [dm3] 2L_6673894_SNP [dm6]	C	A	1.590e^-5	0.104	UPSTREAM CG34310 & 1 other DOWNSTREAM cort INTRON cup & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	1446759	X_1446759_SNP [dm3] X_1552726_SNP [dm6]	G	A	1.595e^-5	0.104	SYNONYMOUS_CODING Mur2B	TF binding site mE1_TFBS_chinmo
X	8287785	X_8287785_SNP [dm3] X_8393752_SNP [dm6]	G	A	1.596e^-5	0.104	INTERGENIC
2R	10443114	2R_10443114_SNP [dm3] 2R_14555609_SNP [dm6]	T	C	1.605e^-5	0.104	INTRON ttv
2L	5727770	2L_5727770_SNP [dm3] 2L_5727770_SNP [dm6]	T	C	1.613e^-5	0.104	NON_SYNONYMOUS_CODING CG14006 INTRON CG11030	TF binding site mE1_TFBS_cad
2L	19934355	2L_19934355_SNP [dm3] 2L_19934355_SNP [dm6]	C	T	1.622e^-5	0.104	UPSTREAM sick & 1 other INTRON sick	TF binding site BDTNP1_TFBS_dl
2R	11344045	2R_11344045_SNP [dm3] 2R_15456540_SNP [dm6]	C	T	1.634e^-5	0.105	SYNONYMOUS_CODING CG43729	TF binding site mE1_TFBS_chinmo
2R	10444580	2R_10444580_SNP [dm3] 2R_14557075_SNP [dm6]	T	A	1.638e^-5	0.105	INTRON ttv
2R	13870463	2R_13870463_SNP [dm3] 2R_17982958_SNP [dm6]	G	T	1.647e^-5	0.105	INTRON dpr13
2R	13135722	2R_13135722_SNP [dm3] 2R_17248217_SNP [dm6]	T	A	1.659e^-5	0.105	UPSTREAM CG12699 INTRON mbl
2R	11352258	2R_11352258_SNP [dm3] 2R_15464753_SNP [dm6]	C	A	1.660e^-5	0.105	DOWNSTREAM CG43729 INTRON CG43729
2L	20792023	2L_20792023_SNP [dm3] 2L_20792023_SNP [dm6]	C	A	1.678e^-5	0.106	INTRON vari	TF binding site mE1_TFBS_Trl
2R	13855385	2R_13855385_SNP [dm3] 2R_17967880_SNP [dm6]	A	G	1.698e^-5	0.107	INTERGENIC
2L	9190482	2L_9190482_SNP [dm3] 2L_9190482_SNP [dm6]	T	C	1.707e^-5	0.107	INTRON tai	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
X	17745788	X_17745788_SNP [dm3] X_17851755_SNP [dm6]	G	T	1.716e^-5	0.107	UTR_3_PRIME CG6506 DOWNSTREAM CG32554	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
2R	10443407	2R_10443407_SNP [dm3] 2R_14555902_SNP [dm6]	T	C	1.717e^-5	0.107	INTRON ttv
2R	13514546	2R_13514546_INS [dm3] 2R_17627041_INS [dm6]	G	GTGCTGCGCGG...	1.724e^-5	0.107	INTRON CG10936
2R	8638091	2R_8638091_SNP [dm3] 2R_12750586_SNP [dm6]	C	T	1.735e^-5	0.107	SYNONYMOUS_CODING CG42663 DOWNSTREAM mos	TF binding site mE1_TFBS_cad
2L	9155698	2L_9155698_SNP [dm3] 2L_9155698_SNP [dm6]	C	T	1.745e^-5	0.107	INTRON CG32982
2R	10676788	2R_10676788_SNP [dm3] 2R_14789283_SNP [dm6]	C	T	1.761e^-5	0.108	INTRON kn	TF binding site mE1_TFBS_inv mE1_TFBS_sens
2L	5709074	2L_5709074_SNP [dm3] 2L_5709074_SNP [dm6]	A	G	1.766e^-5	0.108	UPSTREAM CG7236 INTRON CG7236
2R	4965035	2R_4965035_SNP [dm3] 2R_9077530_SNP [dm6]	A	T	1.775e^-5	0.108	UTR_3_PRIME ana	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	5729051	2L_5729051_SNP [dm3] 2L_5729051_SNP [dm6]	C	T	1.802e^-5	0.109	UPSTREAM CG14006 INTRON CG11030	TF binding site BDTNP1_TFBS_dl
2L	9344683	2L_9344683_SNP [dm3] 2L_9344683_SNP [dm6]	G	A	1.804e^-5	0.109	UTR_3_PRIME CG3748 DOWNSTREAM CG3748
2L	9096347	2L_9096347_SNP [dm3] 2L_9096347_SNP [dm6]	T	C	1.817e^-5	0.109	INTERGENIC	TF binding site mE1_TFBS_sens
2R	7156447	2R_7156447_SNP [dm3] 2R_11268942_SNP [dm6]	G	A	1.828e^-5	0.109	INTRON Cpr47Ef
2R	7156458	2R_7156458_SNP [dm3] 2R_11268953_SNP [dm6]	C	T	1.828e^-5	0.109	INTRON Cpr47Ef
2R	15189469	2R_15189469_SNP [dm3] 2R_19301964_SNP [dm6]	T	C	1.829e^-5	0.109	INTRON Tab2
2R	6562735	2R_6562735_SNP [dm3] 2R_10675230_SNP [dm6]	C	A	1.832e^-5	0.109	INTRON stan	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	10746713	2R_10746713_SNP [dm3] 2R_14859208_SNP [dm6]	A	G	1.835e^-5	0.109	UPSTREAM CG33506 INTRON U3-55K	TF binding site mE1_TFBS_cad mE1_TFBS_inv mE1_TFBS_sens
2R	9636499	2R_9636499_SNP [dm3] 2R_13748994_SNP [dm6]	C	T	1.838e^-5	0.109	UTR_3_PRIME fas
2R	10344183	2R_10344183_SNP [dm3] 2R_14456678_SNP [dm6]	G	T	1.844e^-5	0.109	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3023564	2R_3023564_SNP [dm3] 2R_7136059_SNP [dm6]	C	T	1.851e^-5	0.109	DOWNSTREAM CR44443 INTERGENIC
2L	9417609	2L_9417609_SNP [dm3] 2L_9417609_SNP [dm6]	G	T	1.856e^-5	0.109	INTRON Mco1
2L	21836610	2L_21836610_SNP [dm3] 2L_21836610_SNP [dm6]	C	T	1.871e^-5	0.109	UTR_3_PRIME tsh	TF binding site BDTNP1_TFBS_da
2R	13261695	2R_13261695_SNP [dm3] 2R_17374190_SNP [dm6]	C	T	1.871e^-5	0.109	NON_SYNONYMOUS_CODING mbl UTR_3_PRIME mbl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8359738	2L_8359738_SNP [dm3] 2L_8359738_SNP [dm6]	C	T	1.880e^-5	0.109	NON_SYNONYMOUS_CODING CG7627	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	18746778	3L_18746778_SNP [dm3] 3L_18753678_SNP [dm6]	A	T	1.884e^-5	0.109	INTRON ftz-f1
3R	3412899	3R_3412899_SNP [dm3] 3R_7587177_SNP [dm6]	T	G	1.904e^-5	0.11	INTRON CG34127
X	13681379	X_13681379_SNP [dm3] X_13787346_SNP [dm6]	G	A	1.907e^-5	0.11	INTRON inaE	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
X	12045383	X_12045383_SNP [dm3] X_12151350_SNP [dm6]	C	T	1.912e^-5	0.11	INTRON Ten-a
X	11314319	X_11314319_SNP [dm3] X_11420286_SNP [dm6]	C	A	1.950e^-5	0.111	INTERGENIC
3R	1755824	3R_1755824_SNP [dm3] 3R_5930102_SNP [dm6]	G	A	1.956e^-5	0.111	INTRON CG34113
2R	6755759	2R_6755759_SNP [dm3] 2R_10868254_SNP [dm6]	C	T	1.961e^-5	0.111	INTRON CG30015
2L	13327031	2L_13327031_SNP [dm3] 2L_13327031_SNP [dm6]	G	C	1.973e^-5	0.112	INTRON CG43778
2R	9631977	2R_9631977_SNP [dm3] 2R_13744472_SNP [dm6]	T	C	1.979e^-5	0.112	INTRON fas
2R	17418304	2R_17418304_SNP [dm3] 2R_21530799_SNP [dm6]	C	A	1.981e^-5	0.112	DOWNSTREAM CR44725 INTRON Egfr	TF binding site BDTNP1_TFBS_twi
X	11340923	X_11340923_SNP [dm3] X_11446890_SNP [dm6]	T	C	1.991e^-5	0.112	DOWNSTREAM Sk1 INTRON Evi5
2R	3024564	2R_3024564_SNP [dm3] 2R_7137059_SNP [dm6]	T	G	2.022e^-5	0.113	INTERGENIC
2L	5709091	2L_5709091_SNP [dm3] 2L_5709091_SNP [dm6]	G	A	2.023e^-5	0.113	UPSTREAM CG7236 INTRON CG7236
2R	3057194	2R_3057194_SNP [dm3] 2R_7169689_SNP [dm6]	T	A	2.043e^-5	0.113	INTRON pk
2R	10705501	2R_10705501_SNP [dm3] 2R_14817996_SNP [dm6]	T	G	2.049e^-5	0.113	SYNONYMOUS_CODING CG10202	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	8473556	2L_8473556_SNP [dm3] 2L_8473556_SNP [dm6]	T	G	2.050e^-5	0.113	INTRON d
2R	10585662	2R_10585662_SNP [dm3] 2R_14698157_SNP [dm6]	A	C	2.051e^-5	0.113	INTRON mspo
2R	10572661	2R_10572661_SNP [dm3] 2R_14685156_SNP [dm6]	A	C	2.051e^-5	0.113	INTRON mspo
2R	10688949	2R_10688949_SNP [dm3] 2R_14801444_SNP [dm6]	C	A	2.061e^-5	0.113	INTRON kn	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	9096056	2L_9096056_SNP [dm3] 2L_9096056_SNP [dm6]	A	T	2.080e^-5	0.114	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	9345113	2L_9345113_SNP [dm3] 2L_9345113_SNP [dm6]	G	C	2.086e^-5	0.114	DOWNSTREAM CG3748 INTERGENIC
3L	5142503	3L_5142503_SNP [dm3] 3L_5149403_SNP [dm6]	A	C	2.103e^-5	0.114	NON_SYNONYMOUS_CODING Aats-ala-m DOWNSTREAM Gen
3L	18746854	3L_18746854_SNP [dm3] 3L_18753754_SNP [dm6]	A	T	2.115e^-5	0.115	INTRON ftz-f1
2R	3019420	2R_3019420_SNP [dm3] 2R_7131915_SNP [dm6]	G	C	2.124e^-5	0.115	NON_SYNONYMOUS_CODING Cyp9b2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	5865178	2L_5865178_SNP [dm3] 2L_5865178_SNP [dm6]	G	A	2.142e^-5	0.115	INTRON rau	TF binding site BDTNP1_TFBS_twi
3L	8969596	3L_8969596_SNP [dm3] 3L_8976496_SNP [dm6]	A	G	2.143e^-5	0.115	SYNONYMOUS_CODING Srp68 DOWNSTREAM CG5644	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	10746301	2R_10746301_SNP [dm3] 2R_14858796_SNP [dm6]	A	G	2.157e^-5	0.116	UPSTREAM CG33506 DOWNSTREAM U3-55K INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2L	5864670	2L_5864670_INS [dm3] 2L_5864670_INS [dm6]	CC	TGA	2.184e^-5	0.117	INTRON rau	TF binding site BDTNP1_TFBS_twi
2R	13191867	2R_13191867_SNP [dm3] 2R_17304362_SNP [dm6]	G	A	2.198e^-5	0.117	INTRON mbl
2L	9577826	2L_9577826_SNP [dm3] 2L_9577826_SNP [dm6]	T	C	2.200e^-5	0.117	DOWNSTREAM CG31709 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_slp1
2R	13191053	2R_13191053_SNP [dm3] 2R_17303548_SNP [dm6]	A	T	2.203e^-5	0.117	INTRON mbl
2R	9334599	2R_9334599_SNP [dm3] 2R_13447094_SNP [dm6]	A	G	2.238e^-5	0.118	UPSTREAM CG30062 INTRON cnn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2R	13324067	2R_13324067_SNP [dm3] 2R_17436562_SNP [dm6]	T	C	2.264e^-5	0.119	INTRON EDTP	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	9193398	2L_9193398_SNP [dm3] 2L_9193398_SNP [dm6]	A	G	2.274e^-5	0.119	INTRON tai
2R	10508071	2R_10508071_SNP [dm3] 2R_14620566_SNP [dm6]	G	T	2.276e^-5	0.119	DOWNSTREAM Sec61beta INTRON CG12863	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
2R	3024597	2R_3024597_SNP [dm3] 2R_7137092_SNP [dm6]	C	T	2.289e^-5	0.119	INTERGENIC
2L	2540459	2L_2540459_SNP [dm3] 2L_2540459_SNP [dm6]	T	C	2.302e^-5	0.119	INTERGENIC
2R	12020987	2R_12020987_SNP [dm3] 2R_16133482_SNP [dm6]	C	T	2.306e^-5	0.119	SYNONYMOUS_CODING spin INTRON spin	TF binding site mE1_TFBS_cad
2R	11108166	2R_11108166_SNP [dm3] 2R_15220661_SNP [dm6]	C	G	2.309e^-5	0.119	UPSTREAM Hex-C INTRON CG8079
2R	11108636	2R_11108636_SNP [dm3] 2R_15221131_SNP [dm6]	A	T	2.309e^-5	0.119	UPSTREAM Hex-C INTRON CG8079
2R	10608264	2R_10608264_SNP [dm3] 2R_14720759_SNP [dm6]	C	A	2.313e^-5	0.119	INTERGENIC
2L	17999677	2L_17999677_SNP [dm3] 2L_17999677_SNP [dm6]	T	C	2.318e^-5	0.119	INTERGENIC
2L	10038214	2L_10038214_SNP [dm3] 2L_10038214_SNP [dm6]	G	A	2.347e^-5	0.12	SPLICE_SITE_REGION obst-B INTRON obst-B
2L	5864371	2L_5864371_SNP [dm3] 2L_5864371_SNP [dm6]	T	A	2.355e^-5	0.12	INTRON rau
X	9392108	X_9392108_SNP [dm3] X_9498075_SNP [dm6]	G	A	2.377e^-5	0.121	INTRON mgl	TF binding site BDTNP1_TFBS_dl
2L	9251405	2L_9251405_SNP [dm3] 2L_9251405_SNP [dm6]	T	C	2.388e^-5	0.121	UPSTREAM aust DOWNSTREAM borr EXON CR43734
2R	14959821	2R_14959821_SNP [dm3] 2R_19072316_SNP [dm6]	A	T	2.398e^-5	0.121	INTRON 5-HT1A
2R	14959824	2R_14959824_SNP [dm3] 2R_19072319_SNP [dm6]	A	T	2.398e^-5	0.121	INTRON 5-HT1A
2R	14959825	2R_14959825_SNP [dm3] 2R_19072320_SNP [dm6]	T	A	2.398e^-5	0.121	INTRON 5-HT1A
2R	6561612	2R_6561612_SNP [dm3] 2R_10674107_SNP [dm6]	G	A	2.402e^-5	0.121	INTRON stan	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	8219437	2L_8219437_SNP [dm3] 2L_8219437_SNP [dm6]	C	T	2.408e^-5	0.121	SYNONYMOUS_CODING Snx6
2R	14959851	2R_14959851_SNP [dm3] 2R_19072346_SNP [dm6]	C	A	2.416e^-5	0.121	INTRON 5-HT1A
2R	4965186	2R_4965186_SNP [dm3] 2R_9077681_SNP [dm6]	C	T	2.430e^-5	0.121	DOWNSTREAM ana INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	11314267	X_11314267_SNP [dm3] X_11420234_SNP [dm6]	G	A	2.433e^-5	0.121	INTERGENIC
2R	10612175	2R_10612175_SNP [dm3] 2R_14724670_SNP [dm6]	A	G	2.440e^-5	0.121	INTERGENIC
2L	5737537	2L_5737537_SNP [dm3] 2L_5737537_SNP [dm6]	T	G	2.448e^-5	0.121	INTRON CG11030 & 1 other
3L	10921255	3L_10921255_SNP [dm3] 3L_10928155_SNP [dm6]	T	C	2.456e^-5	0.121	INTERGENIC
2R	14122527	2R_14122527_SNP [dm3] 2R_18235022_SNP [dm6]	T	C	2.463e^-5	0.121	SYNONYMOUS_CODING fj	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15009632	2R_15009632_SNP [dm3] 2R_19122127_SNP [dm6]	C	G	2.478e^-5	0.122	DOWNSTREAM CG15117 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2L	5865076	2L_5865076_SNP [dm3] 2L_5865076_SNP [dm6]	A	G	2.499e^-5	0.122	INTRON rau	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10928174	X_10928174_SNP [dm3] X_11034141_SNP [dm6]	A	G	2.515e^-5	0.123	INTRON CG42339
2L	18813408	2L_18813408_SNP [dm3] 2L_18813408_SNP [dm6]	T	A	2.517e^-5	0.123	UTR_5_PRIME CG17325 UTR_3_PRIME CG42305	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	13255252	2R_13255252_SNP [dm3] 2R_17367747_SNP [dm6]	T	A	2.534e^-5	0.123	INTRON mbl	TF binding site BDTNP1_TFBS_dl
2R	15096246	2R_15096246_SNP [dm3] 2R_19208741_SNP [dm6]	T	C	2.547e^-5	0.123	INTRON hppy
2L	17054078	2L_17054078_SNP [dm3] 2L_17054078_SNP [dm6]	T	G	2.547e^-5	0.123	INTERGENIC
2R	10881890	2R_10881890_SNP [dm3] 2R_14994385_SNP [dm6]	T	C	2.547e^-5	0.123	UPSTREAM CR43830 & 1 other INTERGENIC
X	17201842	X_17201842_SNP [dm3] X_17307809_SNP [dm6]	C	T	2.570e^-5	0.124	INTERGENIC
2L	9089726	2L_9089726_SNP [dm3] 2L_9089726_SNP [dm6]	A	G	2.591e^-5	0.124	DOWNSTREAM Toll-4 INTERGENIC
2L	5737536	2L_5737536_SNP [dm3] 2L_5737536_SNP [dm6]	G	T	2.594e^-5	0.124	INTRON CG11030 & 1 other
2L	9949145	2L_9949145_SNP [dm3] 2L_9949145_SNP [dm6]	G	A	2.604e^-5	0.124	INTERGENIC
2L	5866602	2L_5866602_DEL [dm3] 2L_5866602_DEL [dm6]	TT	T	2.631e^-5	0.125	INTRON rau	TF binding site BDTNP1_TFBS_da
2R	14460547	2R_14460547_SNP [dm3] 2R_18573042_SNP [dm6]	A	T	2.646e^-5	0.125	INTRON GEFmeso	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	17999674	2L_17999674_SNP [dm3] 2L_17999674_SNP [dm6]	G	C	2.647e^-5	0.125	INTERGENIC
2R	18322865	2R_18322865_DEL [dm3] 2R_22435360_DEL [dm6]	TGTAG	T	2.660e^-5	0.126	INTERGENIC
2R	4966701	2R_4966701_SNP [dm3] 2R_9079196_SNP [dm6]	C	T	2.684e^-5	0.126	INTRON CG8083
2R	10599699	2R_10599699_SNP [dm3] 2R_14712194_SNP [dm6]	T	G	2.715e^-5	0.128	INTRON mspo
X	7724171	X_7724171_DEL [dm3] X_7830138_DEL [dm6]	TGTAATAAT	T	2.721e^-5	0.128	INTRON CG1402
2L	5725491	2L_5725491_SNP [dm3] 2L_5725491_SNP [dm6]	A	T	2.742e^-5	0.128	DOWNSTREAM CG14006 INTRON CG11030	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	13681525	X_13681525_SNP [dm3] X_13787492_SNP [dm6]	A	T	2.783e^-5	0.13	INTRON inaE	TF binding site mE1_TFBS_kn
2L	9871224	2L_9871224_SNP [dm3] 2L_9871224_SNP [dm6]	A	T	2.790e^-5	0.13	INTRON nAChRalpha6
X	10721455	X_10721455_SNP [dm3] X_10827422_SNP [dm6]	A	C	2.791e^-5	0.13	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	15061929	2R_15061929_SNP [dm3] 2R_19174424_SNP [dm6]	C	T	2.798e^-5	0.13	INTRON CG10737
3L	10656868	3L_10656868_SNP [dm3] 3L_10663768_SNP [dm6]	G	A	2.808e^-5	0.13	UPSTREAM simj DOWNSTREAM CG8003 INTRON CG32068	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
2R	13264170	2R_13264170_SNP [dm3] 2R_17376665_SNP [dm6]	C	T	2.820e^-5	0.13	UTR_3_PRIME mbl
X	16159941	X_16159941_MNP [dm3] X_16265908_MNP [dm6]	CAT	TTG	2.833e^-5	0.13	INTRON CG12507
2R	11332102	2R_11332102_SNP [dm3] 2R_15444597_SNP [dm6]	C	G	2.835e^-5	0.13	INTRON CG43729
3L	2367742	3L_2367742_INS [dm3] 3L_2367742_INS [dm6]	T	TAT	2.838e^-5	0.13	DOWNSTREAM CG1317 INTERGENIC
2R	3057046	2R_3057046_SNP [dm3] 2R_7169541_SNP [dm6]	G	T	2.849e^-5	0.13	INTRON pk
2R	9496270	2R_9496270_SNP [dm3] 2R_13608765_SNP [dm6]	G	T	2.855e^-5	0.13	NON_SYNONYMOUS_CODING CG12464
2L	9202525	2L_9202525_SNP [dm3] 2L_9202525_SNP [dm6]	A	C	2.878e^-5	0.13	INTRON tai
2R	9219404	2R_9219404_SNP [dm3] 2R_13331899_SNP [dm6]	C	T	2.889e^-5	0.13	INTRON CR44206
X	2686824	X_2686824_DEL [dm3] X_2792791_DEL [dm6]	AA	A	2.893e^-5	0.13	INTRON kirre & 1 other	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10706445	2L_10706445_SNP [dm3] 2L_10706445_SNP [dm6]	T	G	2.900e^-5	0.13	UPSTREAM Lip2 INTRON Lip2	TF binding site mE1_TFBS_inv
X	11314386	X_11314386_SNP [dm3] X_11420353_SNP [dm6]	G	A	2.901e^-5	0.13	INTERGENIC
2R	10705507	2R_10705507_SNP [dm3] 2R_14818002_SNP [dm6]	A	T	2.906e^-5	0.13	SYNONYMOUS_CODING CG10202	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	11051009	2R_11051009_SNP [dm3] 2R_15163504_SNP [dm6]	C	T	2.948e^-5	0.132	INTRON igl
2R	4980022	2R_4980022_SNP [dm3] 2R_9092517_SNP [dm6]	T	A	2.991e^-5	0.133	UTR_5_PRIME CG8080 UTR_3_PRIME CG13741 UPSTREAM CG8080	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2L	17999630	2L_17999630_SNP [dm3] 2L_17999630_SNP [dm6]	C	T	2.993e^-5	0.133	INTERGENIC
2L	17999633	2L_17999633_SNP [dm3] 2L_17999633_SNP [dm6]	C	T	2.993e^-5	0.133	INTERGENIC
2R	9765399	2R_9765399_SNP [dm3] 2R_13877894_SNP [dm6]	C	T	2.995e^-5	0.133	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad
2L	9323301	2L_9323301_SNP [dm3] 2L_9323301_SNP [dm6]	C	A	3.004e^-5	0.133	INTERGENIC
2L	13041185	2L_13041185_SNP [dm3] 2L_13041185_SNP [dm6]	G	A	3.019e^-5	0.133	INTRON CG9932
2L	9089667	2L_9089667_SNP [dm3] 2L_9089667_SNP [dm6]	G	A	3.025e^-5	0.133	DOWNSTREAM Toll-4 INTERGENIC
2L	793238	2L_793238_INS [dm3] 2L_793238_INS [dm6]	A	AA	3.026e^-5	0.133	INTERGENIC
2L	4315251	2L_4315251_DEL [dm3] 2L_4315251_DEL [dm6]	AA	A	3.039e^-5	0.133	UTR_3_PRIME tutl INTRON tutl
2R	4979138	2R_4979138_SNP [dm3] 2R_9091633_SNP [dm6]	T	C	3.040e^-5	0.133	NON_SYNONYMOUS_CODING CG8080 DOWNSTREAM CG13741
2R	10803292	2R_10803292_SNP [dm3] 2R_14915787_SNP [dm6]	G	A	3.051e^-5	0.133	INTRON CG10249
2R	9631995	2R_9631995_DEL [dm3] 2R_13744490_DEL [dm6]	GT	G	3.063e^-5	0.133	INTRON fas
2R	8915792	2R_8915792_INS [dm3] 2R_13028287_INS [dm6]	C	CTGCTACC	3.065e^-5	0.133	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	17999622	2L_17999622_SNP [dm3] 2L_17999622_SNP [dm6]	C	T	3.121e^-5	0.135	INTERGENIC
2L	19289146	2L_19289146_SNP [dm3] 2L_19289146_SNP [dm6]	C	T	3.140e^-5	0.136	INTERGENIC
2L	6677767	2L_6677767_SNP [dm3] 2L_6677767_SNP [dm6]	A	T	3.156e^-5	0.136	UPSTREAM CG11329 DOWNSTREAM Nhe3 INTERGENIC	TF binding site mE1_TFBS_ttk
2L	8390049	2L_8390049_SNP [dm3] 2L_8390049_SNP [dm6]	C	T	3.165e^-5	0.136	UTR_3_PRIME CG42820 UPSTREAM CG42819 DOWNSTREAM snRNA:U6atac:29B	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	481674	3L_481674_SNP [dm3] 3L_481674_SNP [dm6]	C	A	3.170e^-5	0.136	INTRON klar
2L	15348728	2L_15348728_SNP [dm3] 2L_15348728_SNP [dm6]	T	A	3.216e^-5	0.138	INTERGENIC
2L	16004269	2L_16004269_DEL [dm3] 2L_16004269_DEL [dm6]	TTACTTGATTGGTTGTGTC...	T	3.233e^-5	0.138	SPLICE_SITE_DONOR CR43826 SPLICE_SITE_REGION CR43826 UPSTREAM CG13245 & 2 others INTRON beat-Ic & 1 other EXON CR43826
2L	19913184	2L_19913184_SNP [dm3] 2L_19913184_SNP [dm6]	A	G	3.269e^-5	0.139	SYNONYMOUS_CODING Victoria UPSTREAM TotF INTRON sick
2L	4187004	2L_4187004_SNP [dm3] 2L_4187004_SNP [dm6]	T	C	3.288e^-5	0.14	SYNONYMOUS_CODING CG31961 DOWNSTREAM CR44057	TF binding site mE1_TFBS_sens
2R	7310397	2R_7310397_SNP [dm3] 2R_11422892_SNP [dm6]	G	A	3.352e^-5	0.142	INTRON Drip
X	13681397	X_13681397_SNP [dm3] X_13787364_SNP [dm6]	T	A	3.358e^-5	0.142	INTRON inaE	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
X	4975460	X_4975460_SNP [dm3] X_5081427_SNP [dm6]	T	C	3.363e^-5	0.142	INTRON CG32767	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi BDTNP1_TFBS_z
3L	18746715	3L_18746715_SNP [dm3] 3L_18753615_SNP [dm6]	C	G	3.366e^-5	0.142	INTRON ftz-f1
X	13875980	X_13875980_SNP [dm3] X_13981947_SNP [dm6]	T	C	3.385e^-5	0.142	INTRON mamo
X	15025286	X_15025286_SNP [dm3] X_15131253_SNP [dm6]	C	T	3.400e^-5	0.142	INTRON drd
2L	19326853	2L_19326853_SNP [dm3] 2L_19326853_SNP [dm6]	C	T	3.410e^-5	0.142	UPSTREAM CR45258 DOWNSTREAM CR45700 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr
2L	8321174	2L_8321174_SNP [dm3] 2L_8321174_SNP [dm6]	G	A	3.411e^-5	0.142	UTR_3_PRIME CG7787 DOWNSTREAM CG7781	TF binding site mE1_TFBS_ttk
3L	481669	3L_481669_SNP [dm3] 3L_481669_SNP [dm6]	A	G	3.420e^-5	0.142	INTRON klar
X	13681248	X_13681248_SNP [dm3] X_13787215_SNP [dm6]	A	G	3.422e^-5	0.142	INTRON inaE	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2R	3023082	2R_3023082_SNP [dm3] 2R_7135577_SNP [dm6]	G	A	3.433e^-5	0.142	DOWNSTREAM CR44443 INTERGENIC
X	5875437	X_5875437_SNP [dm3] X_5981404_SNP [dm6]	C	G	3.439e^-5	0.142	INTRON Grip
2R	9211343	2R_9211343_SNP [dm3] 2R_13323838_SNP [dm6]	G	A	3.441e^-5	0.142	INTERGENIC
X	21291610	X_21291610_SNP [dm3] X_21420583_SNP [dm6]	T	A	3.458e^-5	0.143	INTERGENIC
3R	1764120	3R_1764120_SNP [dm3] 3R_5938398_SNP [dm6]	G	A	3.470e^-5	0.143	INTRON CG34113
2L	8390177	2L_8390177_SNP [dm3] 2L_8390177_SNP [dm6]	T	G	3.492e^-5	0.143	SYNONYMOUS_CODING CG42820 UPSTREAM CG42819 DOWNSTREAM snRNA:U6atac:29B	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	4971530	2R_4971530_SNP [dm3] 2R_9084025_SNP [dm6]	T	C	3.498e^-5	0.143	SPLICE_SITE_REGION CNT1 DOWNSTREAM CG13742 INTRON CNT1
X	9507437	X_9507437_SNP [dm3] X_9613404_SNP [dm6]	T	C	3.563e^-5	0.145	INTRON CG42797
2L	5721988	2L_5721988_SNP [dm3] 2L_5721988_SNP [dm6]	T	A	3.565e^-5	0.145	NON_SYNONYMOUS_CODING sip1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	10175044	2R_10175044_SNP [dm3] 2R_14287539_SNP [dm6]	A	T	3.569e^-5	0.145	UPSTREAM Ih INTRON Ih	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad
2R	18587646	2R_18587646_SNP [dm3] 2R_22700141_SNP [dm6]	T	G	3.576e^-5	0.145	INTRON robo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
2L	11731161	2L_11731161_SNP [dm3] 2L_11731161_SNP [dm6]	T	C	3.592e^-5	0.145	INTERGENIC
2R	6064333	2R_6064333_SNP [dm3] 2R_10176828_SNP [dm6]	G	A	3.596e^-5	0.145	INTRON KCNQ
X	14097892	X_14097892_SNP [dm3] X_14203859_SNP [dm6]	T	A	3.603e^-5	0.145	DOWNSTREAM l_1_G0469 INTRON l_1_G0007
2L	17934229	2L_17934229_SNP [dm3] 2L_17934229_SNP [dm6]	G	T	3.611e^-5	0.145	INTERGENIC
2R	2768791	2R_2768791_SNP [dm3] 2R_6881286_SNP [dm6]	T	G	3.629e^-5	0.146	UPSTREAM Spn42Dc & 1 other INTRON Spn42Dc
2L	6129621	2L_6129621_SNP [dm3] 2L_6129621_SNP [dm6]	A	G	3.683e^-5	0.147	SYNONYMOUS_CODING tectonic UTR_3_PRIME CG42730	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	11314378	X_11314378_SNP [dm3] X_11420345_SNP [dm6]	A	G	3.684e^-5	0.147	INTERGENIC
X	16536055	X_16536055_SNP [dm3] X_16642022_SNP [dm6]	T	A	3.700e^-5	0.147	SYNONYMOUS_CODING mthl1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	11389564	2L_11389564_SNP [dm3] 2L_11389564_SNP [dm6]	A	C	3.700e^-5	0.147	DOWNSTREAM CR43681 EXON CR43681	regulatory region REDfly_CRMs
X	13679109	X_13679109_SNP [dm3] X_13785076_SNP [dm6]	C	T	3.708e^-5	0.147	INTRON inaE	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	14152482	2R_14152482_SNP [dm3] 2R_18264977_SNP [dm6]	C	T	3.720e^-5	0.147	INTERGENIC	TF binding site mE1_TFBS_cad
2L	14582314	2L_14582314_SNP [dm3] 2L_14582314_SNP [dm6]	G	T	3.720e^-5	0.147	INTERGENIC
2R	4960228	2R_4960228_SNP [dm3] 2R_9072723_SNP [dm6]	G	A	3.752e^-5	0.148	INTRON ana	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA
2R	11711648	2R_11711648_SNP [dm3] 2R_15824143_SNP [dm6]	C	A	3.792e^-5	0.149	INTRON tun	TF binding site mE1_TFBS_cad
2L	20261930	2L_20261930_SNP [dm3] 2L_20261930_SNP [dm6]	C	A	3.795e^-5	0.149	INTERGENIC
2L	9088829	2L_9088829_SNP [dm3] 2L_9088829_SNP [dm6]	C	T	3.816e^-5	0.15	NON_SYNONYMOUS_CODING Toll-4	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	9624869	2R_9624869_SNP [dm3] 2R_13737364_SNP [dm6]	A	C	3.828e^-5	0.15	INTRON fas
2L	19289122	2L_19289122_SNP [dm3] 2L_19289122_SNP [dm6]	C	T	3.831e^-5	0.15	INTERGENIC
2R	15096404	2R_15096404_SNP [dm3] 2R_19208899_SNP [dm6]	A	T	3.837e^-5	0.15	INTRON hppy
2L	19849334	2L_19849334_SNP [dm3] 2L_19849334_SNP [dm6]	T	C	3.847e^-5	0.15	UPSTREAM sick INTRON sick
2R	2768602	2R_2768602_SNP [dm3] 2R_6881097_SNP [dm6]	A	G	3.858e^-5	0.15	UPSTREAM Spn42Dc & 1 other INTRON Spn42Dc	TF binding site mE1_TFBS_Trl
2R	16963012	2R_16963012_SNP [dm3] 2R_21075507_SNP [dm6]	G	A	3.871e^-5	0.15	UPSTREAM Treh INTRON Treh	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	9986149	X_9986149_SNP [dm3] X_10092116_SNP [dm6]	C	T	3.879e^-5	0.15	INTRON RhoU	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	10630394	2L_10630394_SNP [dm3] 2L_10630394_SNP [dm6]	G	A	3.885e^-5	0.15	SYNONYMOUS_CODING CG7329	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	11389290	2L_11389290_SNP [dm3] 2L_11389290_SNP [dm6]	G	C	3.904e^-5	0.15	DOWNSTREAM CR43681 EXON CR43681	regulatory region REDfly_CRMs
3R	5696125	3R_5696125_SNP [dm3] 3R_9870403_SNP [dm6]	G	A	3.922e^-5	0.15	INTERGENIC
2R	17747404	2R_17747404_SNP [dm3] 2R_21859899_SNP [dm6]	G	A	3.926e^-5	0.15	UPSTREAM CG9294 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	15422147	X_15422147_SNP [dm3] X_15528114_SNP [dm6]	T	A	3.927e^-5	0.15	INTRON Ac13E
X	9585103	X_9585103_SNP [dm3] X_9691070_SNP [dm6]	A	G	3.931e^-5	0.15	DOWNSTREAM CR44016 INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	2785952	2R_2785952_SNP [dm3] 2R_6898447_SNP [dm6]	A	T	4.002e^-5	0.153	INTRON CG30158	TF binding site mE1_TFBS_chinmo
2L	10870003	2L_10870003_DEL [dm3] 2L_10870003_DEL [dm6]	AA	A	4.016e^-5	0.153	UPSTREAM CG12517 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	15273157	2R_15273157_SNP [dm3] 2R_19385652_SNP [dm6]	G	A	4.029e^-5	0.153	UPSTREAM CG10081 DOWNSTREAM CG10073 INTERGENIC
2L	7005926	2L_7005926_SNP [dm3] 2L_7005926_SNP [dm6]	A	G	4.066e^-5	0.154	INTRON uif	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
X	9392048	X_9392048_SNP [dm3] X_9498015_SNP [dm6]	C	T	4.072e^-5	0.154	INTRON mgl	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	12875034	3R_12875034_SNP [dm3] 3R_17049312_SNP [dm6]	G	T	4.087e^-5	0.154	DOWNSTREAM Patr-1 INTERGENIC
2R	3016779	2R_3016779_SNP [dm3] 2R_7129274_SNP [dm6]	G	A	4.108e^-5	0.155	NON_SYNONYMOUS_CODING Cyp9b1
2R	10711858	2R_10711858_SNP [dm3] 2R_14824353_SNP [dm6]	A	G	4.179e^-5	0.157	EXON CR45329
2L	10636903	2L_10636903_SNP [dm3] 2L_10636903_SNP [dm6]	C	T	4.181e^-5	0.157	INTRON CG7329
3L	14997427	3L_14997427_SNP [dm3] 3L_15004327_SNP [dm6]	C	G	4.197e^-5	0.157	INTRON Reck	TF binding site mE1_TFBS_cad
2L	10630361	2L_10630361_SNP [dm3] 2L_10630361_SNP [dm6]	C	T	4.205e^-5	0.157	SYNONYMOUS_CODING CG7329	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	10788778	2R_10788778_SNP [dm3] 2R_14901273_SNP [dm6]	T	C	4.212e^-5	0.157	UTR_3_PRIME Cyp317a1 DOWNSTREAM CG10249 & 1 other
2R	7314973	2R_7314973_SNP [dm3] 2R_11427468_SNP [dm6]	T	A	4.215e^-5	0.157	UTR_5_PRIME Drip INTRON Drip
2L	8372724	2L_8372724_SNP [dm3] 2L_8372724_SNP [dm6]	A	G	4.215e^-5	0.157	SYNONYMOUS_CODING CG17292	TF binding site mE1_TFBS_HSA
2R	7673712	2R_7673712_SNP [dm3] 2R_11786207_SNP [dm6]	A	T	4.222e^-5	0.157	INTRON ths
3R	22549387	3R_22549387_SNP [dm3] 3R_26723665_SNP [dm6]	T	G	4.249e^-5	0.157	INTRON CG6420	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	12710782	3L_12710782_SNP [dm3] 3L_12717682_SNP [dm6]	G	A	4.252e^-5	0.157	INTERGENIC
3L	12710777	3L_12710777_SNP [dm3] 3L_12717677_SNP [dm6]	G	T	4.271e^-5	0.157	INTERGENIC
2L	5262041	2L_5262041_SNP [dm3] 2L_5262041_SNP [dm6]	G	C	4.278e^-5	0.157	INTRON tkv	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	10222645	2L_10222645_SNP [dm3] 2L_10222645_SNP [dm6]	A	G	4.305e^-5	0.158	UPSTREAM CG4908 DOWNSTREAM Prosalpha6 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	17829955	2L_17829955_SNP [dm3] 2L_17829955_SNP [dm6]	C	A	4.322e^-5	0.158	INTRON CadN2
3R	12873703	3R_12873703_SNP [dm3] 3R_17047981_SNP [dm6]	A	G	4.356e^-5	0.159	UTR_3_PRIME Patr-1 DOWNSTREAM Patr-1	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
2L	9258365	2L_9258365_SNP [dm3] 2L_9258365_SNP [dm6]	A	C	4.364e^-5	0.159	INTRON Ggamma30A
X	17253376	X_17253376_DEL [dm3] X_17359343_DEL [dm6]	ACTGAAAGCTA...	A	4.367e^-5	0.159	INTERGENIC
X	13681445	X_13681445_SNP [dm3] X_13787412_SNP [dm6]	A	G	4.384e^-5	0.159	INTRON inaE	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2R	7155278	2R_7155278_SNP [dm3] 2R_11267773_SNP [dm6]	C	T	4.388e^-5	0.159	DOWNSTREAM Cpr47Ee INTRON Cpr47Ef
X	13662936	X_13662936_SNP [dm3] X_13768903_SNP [dm6]	G	A	4.408e^-5	0.159	SYNONYMOUS_CODING rdgB	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	2748318	2R_2748318_SNP [dm3] 2R_6860813_SNP [dm6]	A	G	4.425e^-5	0.159	INTERGENIC
2R	2778815	2R_2778815_SNP [dm3] 2R_6891310_SNP [dm6]	T	A	4.425e^-5	0.159	UPSTREAM CG30158 INTERGENIC
2R	10700595	2R_10700595_SNP [dm3] 2R_14813090_SNP [dm6]	G	T	4.427e^-5	0.159	INTERGENIC
2R	10308732	2R_10308732_SNP [dm3] 2R_14421227_SNP [dm6]	G	A	4.440e^-5	0.16	SYNONYMOUS_CODING CG17386	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
2R	3023682	2R_3023682_SNP [dm3] 2R_7136177_SNP [dm6]	A	G	4.448e^-5	0.16	INTERGENIC
3L	7819192	3L_7819192_SNP [dm3] 3L_7826092_SNP [dm6]	A	G	4.473e^-5	0.16	SYNONYMOUS_CODING Pdp1 INTRON Pdp1	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3L	18746710	3L_18746710_SNP [dm3] 3L_18753610_SNP [dm6]	A	T	4.473e^-5	0.16	INTRON ftz-f1
2R	15861441	2R_15861441_SNP [dm3] 2R_19973936_SNP [dm6]	A	G	4.484e^-5	0.16	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	7301825	2R_7301825_SNP [dm3] 2R_11414320_SNP [dm6]	T	A	4.485e^-5	0.16	UPSTREAM CG7763 INTRON Drip
2R	7673713	2R_7673713_SNP [dm3] 2R_11786208_SNP [dm6]	A	G	4.493e^-5	0.16	INTRON ths
2R	13515234	2R_13515234_SNP [dm3] 2R_17627729_SNP [dm6]	A	G	4.502e^-5	0.16	DOWNSTREAM rhi INTRON CG10936
2R	11385683	2R_11385683_SNP [dm3] 2R_15498178_SNP [dm6]	A	G	4.523e^-5	0.16	UPSTREAM CG12964 INTERGENIC
2R	9211344	2R_9211344_SNP [dm3] 2R_13323839_SNP [dm6]	T	G	4.530e^-5	0.16	INTERGENIC
2L	20261276	2L_20261276_SNP [dm3] 2L_20261276_SNP [dm6]	A	G	4.558e^-5	0.16	INTERGENIC
2R	6296063	2R_6296063_DEL [dm3] 2R_10408558_DEL [dm6]	TT	T	4.560e^-5	0.16	FRAME_SHIFT CG43177 DOWNSTREAM CG33477 INTRON CG42732
2L	9327133	2L_9327133_SNP [dm3] 2L_9327133_SNP [dm6]	T	C	4.565e^-5	0.16	UPSTREAM CG17005 DOWNSTREAM CR45456 EXON CR45457
3R	18680598	3R_18680598_SNP [dm3] 3R_22854876_SNP [dm6]	G	A	4.620e^-5	0.162	INTERGENIC
X	12045453	X_12045453_SNP [dm3] X_12151420_SNP [dm6]	C	T	4.637e^-5	0.162	INTRON Ten-a
2L	10629234	2L_10629234_SNP [dm3] 2L_10629234_SNP [dm6]	G	T	4.657e^-5	0.163	DOWNSTREAM CG7329 INTERGENIC	TF binding site mE1_TFBS_HSA
2R	14513648	2R_14513648_SNP [dm3] 2R_18626143_SNP [dm6]	A	G	4.692e^-5	0.163	SYNONYMOUS_CODING Sec6	TF binding site mE1_TFBS_sens
2L	5864750	2L_5864750_SNP [dm3] 2L_5864750_SNP [dm6]	G	T	4.696e^-5	0.163	INTRON rau	TF binding site BDTNP1_TFBS_twi
X	11173981	X_11173981_SNP [dm3] X_11279948_SNP [dm6]	T	A	4.704e^-5	0.163	INTRON CG44422
2L	5730688	2L_5730688_SNP [dm3] 2L_5730688_SNP [dm6]	G	T	4.712e^-5	0.163	INTRON CG11030	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	819749	3L_819749_SNP [dm3] 3L_819749_SNP [dm6]	A	T	4.718e^-5	0.163	INTERGENIC
2R	10711850	2R_10711850_DEL [dm3] 2R_14824345_DEL [dm6]	AA	A	4.723e^-5	0.163	EXON CR45329
X	18360186	X_18360186_SNP [dm3] X_18466153_SNP [dm6]	A	T	4.736e^-5	0.163	INTRON CG32547
2R	3020102	2R_3020102_SNP [dm3] 2R_7132597_SNP [dm6]	T	G	4.749e^-5	0.163	UPSTREAM Cyp9b2 INTERGENIC
2R	10171174	2R_10171174_SNP [dm3] 2R_14283669_SNP [dm6]	G	A	4.755e^-5	0.163	INTRON Ih
2R	4963547	2R_4963547_SNP [dm3] 2R_9076042_SNP [dm6]	C	G	4.776e^-5	0.164	INTRON ana	TF binding site mE1_TFBS_h mE1_TFBS_HSA
2L	20861179	2L_20861179_SNP [dm3] 2L_20861179_SNP [dm6]	T	C	4.815e^-5	0.165	DOWNSTREAM CG9336 INTERGENIC	TF binding site mE1_TFBS_inv
X	11340982	X_11340982_SNP [dm3] X_11446949_SNP [dm6]	C	T	4.835e^-5	0.165	DOWNSTREAM Sk1 INTRON Evi5	TF binding site mE1_TFBS_kn mE1_TFBS_zfh1
2R	3016798	2R_3016798_SNP [dm3] 2R_7129293_SNP [dm6]	T	C	4.842e^-5	0.165	NON_SYNONYMOUS_CODING Cyp9b1 DOWNSTREAM Cyp9b2
X	13260400	X_13260400_SNP [dm3] X_13366367_SNP [dm6]	G	A	4.855e^-5	0.165	UTR_3_PRIME Syt12
2L	5865031	2L_5865031_SNP [dm3] 2L_5865031_SNP [dm6]	T	C	4.870e^-5	0.165	INTRON rau	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9356860	2L_9356860_SNP [dm3] 2L_9356860_SNP [dm6]	T	G	4.907e^-5	0.166	INTERGENIC
X	6528660	X_6528660_SNP [dm3] X_6634627_SNP [dm6]	A	G	4.919e^-5	0.166	SYNONYMOUS_CODING CG14443 INTRON pigs	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	9198701	2L_9198701_SNP [dm3] 2L_9198701_SNP [dm6]	C	T	4.929e^-5	0.166	INTRON tai
2R	13526872	2R_13526872_SNP [dm3] 2R_17639367_SNP [dm6]	G	C	4.930e^-5	0.166	UPSTREAM CG10936 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_Trl
2R	2749651	2R_2749651_SNP [dm3] 2R_6862146_SNP [dm6]	A	G	4.939e^-5	0.166	UTR_3_PRIME coro DOWNSTREAM coro
X	9466900	X_9466900_INS [dm3] X_9572867_INS [dm6]	T	TT	4.944e^-5	0.166	UTR_3_PRIME CG32699
3L	18746709	3L_18746709_SNP [dm3] 3L_18753609_SNP [dm6]	T	C	4.952e^-5	0.166	INTRON ftz-f1
2R	4965565	2R_4965565_SNP [dm3] 2R_9078060_SNP [dm6]	C	T	4.955e^-5	0.166	UPSTREAM CG8083 DOWNSTREAM ana INTERGENIC
2L	8327561	2L_8327561_DEL [dm3] 2L_8327561_DEL [dm6]	TA	G	4.963e^-5	0.166	UTR_5_PRIME CG14275
2L	9261680	2L_9261680_SNP [dm3] 2L_9261680_SNP [dm6]	C	T	4.967e^-5	0.166	DOWNSTREAM CR45262 INTRON Ggamma30A
2L	4186986	2L_4186986_SNP [dm3] 2L_4186986_SNP [dm6]	A	G	4.978e^-5	0.166	SYNONYMOUS_CODING CG31961 DOWNSTREAM CR44057	TF binding site mE1_TFBS_sens
2L	19921758	2L_19921758_SNP [dm3] 2L_19921758_SNP [dm6]	A	C	4.978e^-5	0.166	INTRON sick EXON CR43828
2R	15027114	2R_15027114_SNP [dm3] 2R_19139609_SNP [dm6]	C	G	5.006e^-5	0.166	INTRON CG15111	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	1267484	3L_1267484_SNP [dm3] 3L_1267484_SNP [dm6]	A	G	5.006e^-5	0.166	INTRON CG9134
2L	17834211	2L_17834211_SNP [dm3] 2L_17834211_SNP [dm6]	A	T	5.023e^-5	0.166	INTRON CadN2	TF binding site mE1_TFBS_HSA
2R	3026384	2R_3026384_SNP [dm3] 2R_7138879_SNP [dm6]	G	T	5.030e^-5	0.166	INTERGENIC	TF binding site mE1_TFBS_cad
2L	9097057	2L_9097057_SNP [dm3] 2L_9097057_SNP [dm6]	C	T	5.045e^-5	0.166	UPSTREAM CG31609 INTERGENIC
2R	3505646	2R_3505646_INS [dm3] 2R_7618141_INS [dm6]	T	TT	5.068e^-5	0.167	INTRON CG1358	TF binding site mE1_TFBS_chinmo
X	12045448	X_12045448_SNP [dm3] X_12151415_SNP [dm6]	T	A	5.069e^-5	0.167	INTRON Ten-a
2R	11049033	2R_11049033_SNP [dm3] 2R_15161528_SNP [dm6]	C	A	5.132e^-5	0.168	INTRON igl
2L	11081151	2L_11081151_SNP [dm3] 2L_11081151_SNP [dm6]	T	C	5.149e^-5	0.169	INTRON AstC
2R	9253357	2R_9253357_SNP [dm3] 2R_13365852_SNP [dm6]	C	A	5.177e^-5	0.169	INTERGENIC	TF binding site mE1_TFBS_cad
3L	11738952	3L_11738952_SNP [dm3] 3L_11745852_SNP [dm6]	A	C	5.186e^-5	0.169	INTRON CG6024
X	9861345	X_9861345_SNP [dm3] X_9967312_SNP [dm6]	C	T	5.203e^-5	0.169	DOWNSTREAM CG43386 & 1 other INTRON CG43386
2L	8390166	2L_8390166_SNP [dm3] 2L_8390166_SNP [dm6]	A	G	5.226e^-5	0.169	SYNONYMOUS_CODING CG42820 UPSTREAM CG42819 DOWNSTREAM snRNA:U6atac:29B	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	15096349	2R_15096349_DEL [dm3] 2R_19208844_DEL [dm6]	GCTTATGG	G	5.227e^-5	0.169	INTRON hppy
2R	4883402	2R_4883402_SNP [dm3] 2R_8995897_SNP [dm6]	C	T	5.248e^-5	0.169	NON_SYNONYMOUS_CODING Np	TF binding site mE1_TFBS_HSA
2R	17748082	2R_17748082_SNP [dm3] 2R_21860577_SNP [dm6]	A	C	5.252e^-5	0.169	UPSTREAM CG9294 INTERGENIC
2R	9632167	2R_9632167_SNP [dm3] 2R_13744662_SNP [dm6]	T	C	5.254e^-5	0.169	INTRON fas
2R	17425490	2R_17425490_SNP [dm3] 2R_21537985_SNP [dm6]	A	G	5.256e^-5	0.169	NON_SYNONYMOUS_CODING CG30287 DOWNSTREAM CG33226 INTRON Egfr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_GATAe mE1_TFBS_HSA
X	14641188	X_14641188_SNP [dm3] X_14747155_SNP [dm6]	C	A	5.299e^-5	0.17	NON_SYNONYMOUS_CODING NetB	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9348746	2R_9348746_SNP [dm3] 2R_13461241_SNP [dm6]	T	C	5.313e^-5	0.17	INTRON arr
2L	5022356	2L_5022356_SNP [dm3] 2L_5022356_SNP [dm6]	G	C	5.321e^-5	0.17	INTRON vkg
3L	1832136	3L_1832136_SNP [dm3] 3L_1832136_SNP [dm6]	A	T	5.321e^-5	0.17	UPSTREAM Cpr62Ba DOWNSTREAM Cpr62Bb INTERGENIC
2R	13262355	2R_13262355_SNP [dm3] 2R_17374850_SNP [dm6]	T	A	5.324e^-5	0.17	UTR_3_PRIME mbl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	13450246	2R_13450246_SNP [dm3] 2R_17562741_SNP [dm6]	T	C	5.336e^-5	0.17	UTR_3_PRIME Klp54D UPSTREAM CG43324 INTRON Klp54D
2L	19921693	2L_19921693_SNP [dm3] 2L_19921693_SNP [dm6]	G	C	5.387e^-5	0.171	INTRON sick EXON CR43828
3R	25800573	3R_25800573_SNP [dm3] 3R_29974851_SNP [dm6]	A	G	5.396e^-5	0.171	INTERGENIC
2R	12598741	2R_12598741_SNP [dm3] 2R_16711236_SNP [dm6]	A	G	5.431e^-5	0.171	INTRON CG30463
X	13812136	X_13812136_DEL [dm3] X_13918103_DEL [dm6]	AA	C	5.431e^-5	0.171	INTRON mamo
X	1458108	X_1458108_SNP [dm3] X_1564075_SNP [dm6]	T	C	5.431e^-5	0.171	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2L	14122583	2L_14122583_SNP [dm3] 2L_14122583_SNP [dm6]	A	C	5.432e^-5	0.171	INTERGENIC
2L	11242261	2L_11242261_SNP [dm3] 2L_11242261_SNP [dm6]	G	A	5.433e^-5	0.171	INTRON ab
2L	13988715	2L_13988715_SNP [dm3] 2L_13988715_SNP [dm6]	G	A	5.444e^-5	0.171	INTRON rk
2R	13508646	2R_13508646_SNP [dm3] 2R_17621141_SNP [dm6]	A	G	5.470e^-5	0.172	INTRON CG10936
2R	14222122	2R_14222122_SNP [dm3] 2R_18334617_SNP [dm6]	G	T	5.513e^-5	0.173	INTRON sbb	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3R	23374047	3R_23374047_SNP [dm3] 3R_27548325_SNP [dm6]	T	A	5.516e^-5	0.173	UTR_3_PRIME Klp98A DOWNSTREAM Gr98d	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv
2R	17748265	2R_17748265_SNP [dm3] 2R_21860760_SNP [dm6]	A	T	5.533e^-5	0.173	UPSTREAM CG9294 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	11961309	2L_11961309_SNP [dm3] 2L_11961309_SNP [dm6]	T	G	5.561e^-5	0.174	INTRON CR43314 EXON CR43314
2L	21949043	2L_21949043_SNP [dm3] 2L_21949043_SNP [dm6]	A	T	5.596e^-5	0.174	DOWNSTREAM CR45704 INTERGENIC
2R	11839395	2R_11839395_DEL [dm3] 2R_15951890_DEL [dm6]	CACAAACTACTGGTTACTTT...	C	5.606e^-5	0.174	SPLICE_SITE_DONOR Strn-Mlck SPLICE_SITE_REGION Strn-Mlck UTR_5_PRIME Strn-Mlck UPSTREAM Strn-Mlck INTRON Strn-Mlck
2L	9304036	2L_9304036_SNP [dm3] 2L_9304036_SNP [dm6]	C	T	5.630e^-5	0.174	DOWNSTREAM CR42844 INTERGENIC
X	11154455	X_11154455_SNP [dm3] X_11260422_SNP [dm6]	T	C	5.650e^-5	0.174	INTRON CG44422
2R	10346191	2R_10346191_SNP [dm3] 2R_14458686_SNP [dm6]	C	A	5.678e^-5	0.174	UTR_5_PRIME Oaz INTRON Oaz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2R	9253351	2R_9253351_SNP [dm3] 2R_13365846_SNP [dm6]	A	T	5.682e^-5	0.174	INTERGENIC	TF binding site mE1_TFBS_cad
2R	15096407	2R_15096407_SNP [dm3] 2R_19208902_SNP [dm6]	T	G	5.691e^-5	0.174	INTRON hppy
2L	6001227	2L_6001227_SNP [dm3] 2L_6001227_SNP [dm6]	G	T	5.696e^-5	0.174	SYNONYMOUS_CODING Tsp26A INTRON Tsp26A	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	9768777	2R_9768777_SNP [dm3] 2R_13881272_SNP [dm6]	C	T	5.698e^-5	0.174	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	17712723	2R_17712723_SNP [dm3] 2R_21825218_SNP [dm6]	C	T	5.701e^-5	0.174	SYNONYMOUS_CODING CG13492	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	9200253	2L_9200253_SNP [dm3] 2L_9200253_SNP [dm6]	C	T	5.706e^-5	0.174	INTRON tai
2R	11589612	2R_11589612_SNP [dm3] 2R_15702107_SNP [dm6]	T	G	5.729e^-5	0.174	UPSTREAM CG30080 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2L	5724860	2L_5724860_SNP [dm3] 2L_5724860_SNP [dm6]	A	T	5.737e^-5	0.174	UTR_5_PRIME CG11030 DOWNSTREAM sip1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
2L	5725050	2L_5725050_SNP [dm3] 2L_5725050_SNP [dm6]	C	A	5.737e^-5	0.174	UTR_5_PRIME CG11030	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	10420231	2L_10420231_SNP [dm3] 2L_10420231_SNP [dm6]	A	C	5.743e^-5	0.174	DOWNSTREAM pie INTRON RfC3	TF binding site mE1_TFBS_ttk
2R	13263982	2R_13263982_SNP [dm3] 2R_17376477_SNP [dm6]	T	A	5.747e^-5	0.174	UTR_3_PRIME mbl	TF binding site mE1_TFBS_kn
3L	17999169	3L_17999169_SNP [dm3] 3L_18006069_SNP [dm6]	T	A	5.750e^-5	0.174	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	7315344	2R_7315344_SNP [dm3] 2R_11427839_SNP [dm6]	G	T	5.750e^-5	0.174	UPSTREAM Drip INTRON Drip
2L	5477644	2L_5477644_SNP [dm3] 2L_5477644_SNP [dm6]	G	A	5.765e^-5	0.174	INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D
2L	5868327	2L_5868327_SNP [dm3] 2L_5868327_SNP [dm6]	C	T	5.780e^-5	0.175	INTRON rau	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	13094633	2R_13094633_SNP [dm3] 2R_17207128_SNP [dm6]	G	A	5.792e^-5	0.175	INTERGENIC
2R	2856233	2R_2856233_SNP [dm3] 2R_6968728_SNP [dm6]	C	T	5.803e^-5	0.175	INTRON mim & 1 other
2L	10707045	2L_10707045_SNP [dm3] 2L_10707045_SNP [dm6]	G	A	5.868e^-5	0.176	UPSTREAM Lip2 INTRON Lip2	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	1832124	3L_1832124_SNP [dm3] 3L_1832124_SNP [dm6]	G	C	5.886e^-5	0.177	UPSTREAM Cpr62Ba DOWNSTREAM Cpr62Bb INTERGENIC
X	10832811	X_10832811_SNP [dm3] X_10938778_SNP [dm6]	A	C	5.936e^-5	0.177	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10833107	X_10833107_SNP [dm3] X_10939074_SNP [dm6]	T	A	5.936e^-5	0.177	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10833484	X_10833484_DEL [dm3] X_10939451_DEL [dm6]	TTAGAAAAACATGGCATGAA...	GTAAAATT	5.936e^-5	0.177	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	8338021	X_8338021_SNP [dm3] X_8443988_SNP [dm6]	C	T	5.950e^-5	0.177	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10825186	3R_10825186_SNP [dm3] 3R_14999464_SNP [dm6]	G	A	5.951e^-5	0.177	INTERGENIC
2R	13869991	2R_13869991_SNP [dm3] 2R_17982486_SNP [dm6]	A	G	5.954e^-5	0.177	INTRON dpr13
2L	8390546	2L_8390546_SNP [dm3] 2L_8390546_SNP [dm6]	T	C	6.000e^-5	0.178	NON_SYNONYMOUS_CODING CG42820 DOWNSTREAM snRNA:U6atac:29B	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	9453312	2L_9453312_SNP [dm3] 2L_9453312_SNP [dm6]	G	A	6.011e^-5	0.178	INTRON numb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	9196747	2L_9196747_SNP [dm3] 2L_9196747_SNP [dm6]	A	G	6.021e^-5	0.178	INTRON tai
2R	9215699	2R_9215699_SNP [dm3] 2R_13328194_SNP [dm6]	C	A	6.032e^-5	0.178	INTERGENIC
2R	11603197	2R_11603197_SNP [dm3] 2R_15715692_SNP [dm6]	T	A	6.065e^-5	0.179	INTERGENIC
2R	10763630	2R_10763630_SNP [dm3] 2R_14876125_SNP [dm6]	G	C	6.067e^-5	0.179	NON_SYNONYMOUS_CODING Cyp6a23 DOWNSTREAM Cyp6a17
3L	8509920	3L_8509920_SNP [dm3] 3L_8516820_SNP [dm6]	C	T	6.101e^-5	0.179	SYNONYMOUS_CODING CG6765	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	14369936	3R_14369936_SNP [dm3] 3R_18544214_SNP [dm6]	G	C	6.102e^-5	0.179	INTRON fru
2L	21837609	2L_21837609_SNP [dm3] 2L_21837609_SNP [dm6]	T	A	6.108e^-5	0.179	DOWNSTREAM tsh INTERGENIC
2L	9202535	2L_9202535_SNP [dm3] 2L_9202535_SNP [dm6]	C	T	6.117e^-5	0.179	INTRON tai
2R	12198157	2R_12198157_SNP [dm3] 2R_16310652_SNP [dm6]	G	A	6.125e^-5	0.179	INTRON Nox	TF binding site mE1_TFBS_chinmo
2L	8534060	2L_8534060_SNP [dm3] 2L_8534060_SNP [dm6]	C	T	6.139e^-5	0.179	INTRON CG17834	TF binding site mE1_TFBS_cad mE1_TFBS_cnc
2L	9352491	2L_9352491_SNP [dm3] 2L_9352491_SNP [dm6]	A	T	6.158e^-5	0.179	INTERGENIC
2L	7261847	2L_7261847_INS [dm3] 2L_7261847_INS [dm6]	G	GA	6.161e^-5	0.179	INTRON Wnt4
3R	4400876	3R_4400876_INS [dm3] 3R_8575154_INS [dm6]	T	TT	6.172e^-5	0.179	INTERGENIC
2R	2864154	2R_2864154_SNP [dm3] 2R_6976649_SNP [dm6]	G	A	6.179e^-5	0.179	SYNONYMOUS_CODING vimar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	10508075	2R_10508075_SNP [dm3] 2R_14620570_SNP [dm6]	A	T	6.189e^-5	0.179	DOWNSTREAM Sec61beta INTRON CG12863	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
2R	10585511	2R_10585511_SNP [dm3] 2R_14698006_SNP [dm6]	T	A	6.208e^-5	0.179	INTRON mspo
2L	9242421	2L_9242421_SNP [dm3] 2L_9242421_SNP [dm6]	C	G	6.263e^-5	0.179	SYNONYMOUS_CODING tai	TF binding site mE1_TFBS_chinmo
2L	9157108	2L_9157108_SNP [dm3] 2L_9157108_SNP [dm6]	A	G	6.266e^-5	0.179	INTRON CG32982
3L	1844793	3L_1844793_SNP [dm3] 3L_1844793_SNP [dm6]	G	A	6.275e^-5	0.179	INTERGENIC
2R	7279665	2R_7279665_DEL [dm3] 2R_11392160_DEL [dm6]	CA	C	6.310e^-5	0.179	INTRON sprt	TF binding site mE1_TFBS_sens
2R	4499537	2R_4499537_SNP [dm3] 2R_8612032_SNP [dm6]	T	C	6.323e^-5	0.179	NON_SYNONYMOUS_CODING CG8642 UTR_3_PRIME rgr DOWNSTREAM rgr
2L	4186899	2L_4186899_SNP [dm3] 2L_4186899_SNP [dm6]	T	G	6.328e^-5	0.179	NON_SYNONYMOUS_CODING CG31961 DOWNSTREAM CR44057	TF binding site mE1_TFBS_sens
X	22335306	X_22335306_SNP [dm3] X_22933470_SNP [dm6]	C	T	6.338e^-5	0.179	INTERGENIC	transposable element FlyBase
X	1458796	X_1458796_SNP [dm3] X_1564763_SNP [dm6]	C	G	6.351e^-5	0.179	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2L	17058253	2L_17058253_SNP [dm3] 2L_17058253_SNP [dm6]	A	G	6.361e^-5	0.179	INTERGENIC
X	8347725	X_8347725_SNP [dm3] X_8453692_SNP [dm6]	T	A	6.368e^-5	0.179	INTRON org-1
2L	19912387	2L_19912387_SNP [dm3] 2L_19912387_SNP [dm6]	T	A	6.369e^-5	0.179	UPSTREAM CR43097 & 1 other DOWNSTREAM Victoria INTRON sick
2R	2749232	2R_2749232_SNP [dm3] 2R_6861727_SNP [dm6]	T	A	6.374e^-5	0.179	DOWNSTREAM coro INTERGENIC
2R	2762132	2R_2762132_SNP [dm3] 2R_6874627_SNP [dm6]	T	C	6.374e^-5	0.179	SYNONYMOUS_CODING CG9447 UPSTREAM CR44169 INTRON CR44169
2R	18643936	2R_18643936_SNP [dm3] 2R_22756431_SNP [dm6]	G	A	6.377e^-5	0.179	DOWNSTREAM CG13526 INTRON CG42260 EXON CR30267
2R	2460979	2R_2460979_SNP [dm3] 2R_6573474_SNP [dm6]	T	A	6.381e^-5	0.179	INTRON jing	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2L	15348643	2L_15348643_SNP [dm3] 2L_15348643_SNP [dm6]	G	T	6.383e^-5	0.179	INTERGENIC
X	4975375	X_4975375_SNP [dm3] X_5081342_SNP [dm6]	A	G	6.402e^-5	0.179	INTRON CG32767	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_z mE1_TFBS_cad
2R	15060862	2R_15060862_SNP [dm3] 2R_19173357_SNP [dm6]	T	C	6.405e^-5	0.179	INTRON CG10737
2L	14950366	2L_14950366_SNP [dm3] 2L_14950366_SNP [dm6]	T	A	6.409e^-5	0.179	INTRON CG42313
2L	8385515	2L_8385515_SNP [dm3] 2L_8385515_SNP [dm6]	A	T	6.417e^-5	0.179	UPSTREAM CG13384 INTRON CG13384	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	13469360	3R_13469360_SNP [dm3] 3R_17643638_SNP [dm6]	A	G	6.422e^-5	0.179	INTRON CG43175
2R	15403601	2R_15403601_SNP [dm3] 2R_19516096_SNP [dm6]	A	G	6.428e^-5	0.179	INTERGENIC
2L	8080199	2L_8080199_SNP [dm3] 2L_8080199_SNP [dm6]	G	C	6.434e^-5	0.179	NON_SYNONYMOUS_CODING Mcr	TF binding site mE1_TFBS_sens
X	11088369	X_11088369_SNP [dm3] X_11194336_SNP [dm6]	T	C	6.439e^-5	0.179	DOWNSTREAM CR44765 INTERGENIC
X	1432814	X_1432814_SNP [dm3] X_1538781_SNP [dm6]	A	T	6.445e^-5	0.179	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2L	9199317	2L_9199317_SNP [dm3] 2L_9199317_SNP [dm6]	C	T	6.447e^-5	0.179	INTRON tai
X	1457312	X_1457312_SNP [dm3] X_1563279_SNP [dm6]	G	C	6.455e^-5	0.179	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2R	10572583	2R_10572583_SNP [dm3] 2R_14685078_SNP [dm6]	T	A	6.487e^-5	0.18	INTRON mspo
3L	1830070	3L_1830070_SNP [dm3] 3L_1830070_SNP [dm6]	G	C	6.540e^-5	0.181	INTRON Cpr62Ba
2L	17941894	2L_17941894_SNP [dm3] 2L_17941894_SNP [dm6]	T	C	6.604e^-5	0.182	INTERGENIC
X	19009947	X_19009947_SNP [dm3] X_19115914_SNP [dm6]	C	A	6.607e^-5	0.182	INTERGENIC
2R	13527341	2R_13527341_SNP [dm3] 2R_17639836_SNP [dm6]	T	G	6.610e^-5	0.182	UPSTREAM CG10936 INTERGENIC
2R	15295010	2R_15295010_SNP [dm3] 2R_19407505_SNP [dm6]	A	G	6.617e^-5	0.182	INTRON hts
X	1432611	X_1432611_SNP [dm3] X_1538578_SNP [dm6]	C	T	6.633e^-5	0.182	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2R	2853491	2R_2853491_SNP [dm3] 2R_6965986_SNP [dm6]	G	A	6.639e^-5	0.182	INTRON mim & 1 other
2R	4958716	2R_4958716_SNP [dm3] 2R_9071211_SNP [dm6]	T	C	6.646e^-5	0.182	INTRON ana	TF binding site BDTNP1_TFBS_Mad BDTNP1_TFBS_Med mE1_TFBS_cad
2L	3708305	2L_3708305_SNP [dm3] 2L_3708305_SNP [dm6]	A	T	6.650e^-5	0.182	SYNONYMOUS_CODING cutlet	TF binding site mE1_TFBS_cad
2L	20826203	2L_20826203_SNP [dm3] 2L_20826203_SNP [dm6]	T	A	6.688e^-5	0.182	INTRON CG9331	TF binding site mE1_TFBS_bab1 mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sbb
3L	14249480	3L_14249480_SNP [dm3] 3L_14256380_SNP [dm6]	T	C	6.689e^-5	0.182	INTERGENIC
3L	10656636	3L_10656636_SNP [dm3] 3L_10663536_SNP [dm6]	C	T	6.755e^-5	0.184	SYNONYMOUS_CODING CG32068 DOWNSTREAM CG8003	TF binding site BDTNP1_TFBS_dl
2R	15096303	2R_15096303_DEL [dm3] 2R_19208798_DEL [dm6]	TAT	T	6.769e^-5	0.184	INTRON hppy
2L	5722491	2L_5722491_SNP [dm3] 2L_5722491_SNP [dm6]	T	A	6.807e^-5	0.185	NON_SYNONYMOUS_CODING sip1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10706371	2L_10706371_SNP [dm3] 2L_10706371_SNP [dm6]	G	T	6.834e^-5	0.185	UPSTREAM Lip2 INTRON Lip2	TF binding site mE1_TFBS_inv
X	8403065	X_8403065_SNP [dm3] X_8509032_SNP [dm6]	T	G	6.835e^-5	0.185	UPSTREAM CG33181 INTRON CG33181
2R	7315395	2R_7315395_SNP [dm3] 2R_11427890_SNP [dm6]	A	G	6.872e^-5	0.186	UPSTREAM Drip INTRON Drip
2L	17764354	2L_17764354_SNP [dm3] 2L_17764354_SNP [dm6]	G	T	6.893e^-5	0.186	INTRON CadN	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_HSA mE1_TFBS_sens
X	9507434	X_9507434_SNP [dm3] X_9613401_SNP [dm6]	T	C	6.915e^-5	0.186	INTRON CG42797
3L	8200685	3L_8200685_SNP [dm3] 3L_8207585_SNP [dm6]	A	C	6.952e^-5	0.187	INTERGENIC
2L	9321230	2L_9321230_SNP [dm3] 2L_9321230_SNP [dm6]	C	A	6.963e^-5	0.187	INTERGENIC
2L	17983663	2L_17983663_SNP [dm3] 2L_17983663_SNP [dm6]	G	A	6.975e^-5	0.187	INTERGENIC
2R	10354654	2R_10354654_SNP [dm3] 2R_14467149_SNP [dm6]	A	C	6.984e^-5	0.187	INTERGENIC
X	14630345	X_14630345_SNP [dm3] X_14736312_SNP [dm6]	A	G	6.985e^-5	0.187	INTRON NetB
2R	16962546	2R_16962546_SNP [dm3] 2R_21075041_SNP [dm6]	A	C	7.004e^-5	0.187	UPSTREAM Treh INTRON Treh	TF binding site mE1_TFBS_Trl
3L	1483085	3L_1483085_SNP [dm3] 3L_1483085_SNP [dm6]	A	G	7.010e^-5	0.187	INTRON stet	TF binding site mE1_TFBS_cad
2L	11881398	2L_11881398_SNP [dm3] 2L_11881398_SNP [dm6]	T	C	7.013e^-5	0.187	INTRON Pde1c	TF binding site mE1_TFBS_inv
2R	4888749	2R_4888749_SNP [dm3] 2R_9001244_SNP [dm6]	C	A	7.085e^-5	0.187	INTRON Np
2R	16285790	2R_16285790_SNP [dm3] 2R_20398285_SNP [dm6]	C	A	7.088e^-5	0.187	INTERGENIC
2L	3602964	2L_3602964_SNP [dm3] 2L_3602964_SNP [dm6]	G	A	7.101e^-5	0.187	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
X	8404188	X_8404188_SNP [dm3] X_8510155_SNP [dm6]	C	A	7.104e^-5	0.187	UTR_5_PRIME CG33181 INTRON CG33181	TF binding site BDTNP1_TFBS_dl
3R	15063440	3R_15063440_SNP [dm3] 3R_19237718_SNP [dm6]	C	A	7.105e^-5	0.187	SYNONYMOUS_CODING unc79	TF binding site BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	20256045	2L_20256045_DEL [dm3] 2L_20256045_DEL [dm6]	GG	G	7.110e^-5	0.187	UTR_3_PRIME CG17571	TF binding site mE1_TFBS_chinmo
X	13681470	X_13681470_SNP [dm3] X_13787437_SNP [dm6]	G	T	7.111e^-5	0.187	INTRON inaE	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2L	19912392	2L_19912392_DEL [dm3] 2L_19912392_DEL [dm6]	AA	A	7.121e^-5	0.187	UPSTREAM CR43097 & 1 other DOWNSTREAM Victoria INTRON sick
2R	10612541	2R_10612541_SNP [dm3] 2R_14725036_SNP [dm6]	G	A	7.130e^-5	0.187	INTERGENIC
X	11314299	X_11314299_SNP [dm3] X_11420266_SNP [dm6]	A	T	7.131e^-5	0.187	INTERGENIC
2R	13527349	2R_13527349_SNP [dm3] 2R_17639844_SNP [dm6]	A	T	7.139e^-5	0.187	UPSTREAM CG10936 INTERGENIC
2L	11786700	2L_11786700_SNP [dm3] 2L_11786700_SNP [dm6]	G	C	7.157e^-5	0.187	INTERGENIC
X	9745898	X_9745898_SNP [dm3] X_9851865_SNP [dm6]	G	A	7.159e^-5	0.187	UTR_3_PRIME CG32698
2R	10186304	2R_10186304_SNP [dm3] 2R_14298799_SNP [dm6]	T	C	7.183e^-5	0.187	UTR_3_PRIME Ih
X	17745768	X_17745768_SNP [dm3] X_17851735_SNP [dm6]	A	G	7.184e^-5	0.187	SYNONYMOUS_CODING CG6506 DOWNSTREAM CG32554	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
2R	12598563	2R_12598563_SNP [dm3] 2R_16711058_SNP [dm6]	C	T	7.185e^-5	0.187	INTRON CG30463
3R	22552060	3R_22552060_SNP [dm3] 3R_26726338_SNP [dm6]	G	A	7.198e^-5	0.187	SYNONYMOUS_CODING CG14244 UPSTREAM CG14246
3R	22554275	3R_22554275_SNP [dm3] 3R_26728553_SNP [dm6]	G	A	7.216e^-5	0.187	UPSTREAM CG14245 INTRON CG14246	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	2775997	2R_2775997_SNP [dm3] 2R_6888492_SNP [dm6]	G	A	7.256e^-5	0.188	DOWNSTREAM Spn42De INTERGENIC	TF binding site mE1_TFBS_cad
2L	12376762	2L_12376762_SNP [dm3] 2L_12376762_SNP [dm6]	G	A	7.301e^-5	0.189	INTRON bru-2
2L	20557066	2L_20557066_SNP [dm3] 2L_20557066_SNP [dm6]	A	C	7.348e^-5	0.19	INTERGENIC
3R	13766866	3R_13766866_SNP [dm3] 3R_17941144_SNP [dm6]	A	G	7.363e^-5	0.19	INTRON cpo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	9347965	3L_9347965_SNP [dm3] 3L_9354865_SNP [dm6]	C	T	7.380e^-5	0.19	SYNONYMOUS_CODING CG32040 INTRON UGP
2L	8026049	2L_8026049_SNP [dm3] 2L_8026049_SNP [dm6]	C	T	7.409e^-5	0.191	SYNONYMOUS_CODING Tg DOWNSTREAM CG7367
2R	12598554	2R_12598554_SNP [dm3] 2R_16711049_SNP [dm6]	T	C	7.414e^-5	0.191	INTRON CG30463
X	17250853	X_17250853_SNP [dm3] X_17356820_SNP [dm6]	G	T	7.440e^-5	0.191	INTERGENIC
3R	25720497	3R_25720497_SNP [dm3] 3R_29894775_SNP [dm6]	A	G	7.531e^-5	0.193	UPSTREAM CG31038 INTRON CG31038	TF binding site BDTNP1_TFBS_twi
2L	9095890	2L_9095890_SNP [dm3] 2L_9095890_SNP [dm6]	T	C	7.542e^-5	0.193	INTERGENIC
2L	9260695	2L_9260695_SNP [dm3] 2L_9260695_SNP [dm6]	G	C	7.555e^-5	0.193	INTRON Ggamma30A
3R	1773568	3R_1773568_SNP [dm3] 3R_5947846_SNP [dm6]	A	G	7.575e^-5	0.193	INTRON CG34113
2L	13948415	2L_13948415_SNP [dm3] 2L_13948415_SNP [dm6]	A	T	7.583e^-5	0.193	UPSTREAM CG16884 INTRON Ance-3
3L	5880021	3L_5880021_INS [dm3] 3L_5886921_INS [dm6]	A	AGCCACATC	7.595e^-5	0.193	INTERGENIC
2R	10151602	2R_10151602_SNP [dm3] 2R_14264097_SNP [dm6]	C	T	7.604e^-5	0.193	INTRON CG8547	TF binding site mE1_TFBS_cad
2L	9392814	2L_9392814_SNP [dm3] 2L_9392814_SNP [dm6]	C	T	7.610e^-5	0.193	INTRON Shawl
2R	10346150	2R_10346150_SNP [dm3] 2R_14458645_SNP [dm6]	G	A	7.613e^-5	0.193	START_GAINED Oaz UTR_5_PRIME Oaz INTRON Oaz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2L	21613986	2L_21613986_SNP [dm3] 2L_21613986_SNP [dm6]	T	A	7.634e^-5	0.193	DOWNSTREAM CG2201 INTERGENIC	transposable element FlyBase
2R	15070716	2R_15070716_SNP [dm3] 2R_19183211_SNP [dm6]	G	A	7.661e^-5	0.193	INTRON hppy
2L	9259660	2L_9259660_SNP [dm3] 2L_9259660_SNP [dm6]	T	A	7.670e^-5	0.193	INTRON Ggamma30A
2L	4576819	2L_4576819_SNP [dm3] 2L_4576819_SNP [dm6]	A	G	7.678e^-5	0.193	DOWNSTREAM HP6 INTRON dp	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2R	10154275	2R_10154275_SNP [dm3] 2R_14266770_SNP [dm6]	A	G	7.679e^-5	0.193	INTRON CG8547
2R	11055431	2R_11055431_SNP [dm3] 2R_15167926_SNP [dm6]	T	C	7.680e^-5	0.193	INTRON igl
3L	2628841	3L_2628841_SNP [dm3] 3L_2628841_SNP [dm6]	C	G	7.710e^-5	0.194	DOWNSTREAM CR45660 INTRON Pxn
2R	2746645	2R_2746645_SNP [dm3] 2R_6859140_SNP [dm6]	T	A	7.723e^-5	0.194	INTERGENIC
2L	6000885	2L_6000885_SNP [dm3] 2L_6000885_SNP [dm6]	T	C	7.766e^-5	0.195	SYNONYMOUS_CODING Tsp26A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	16173475	3L_16173475_SNP [dm3] 3L_16180375_SNP [dm6]	T	C	7.771e^-5	0.195	INTERGENIC	TF binding site mE1_TFBS_inv
2L	18283959	2L_18283959_INS [dm3] 2L_18283959_INS [dm6]	A	AA	7.806e^-5	0.195	DOWNSTREAM CG31787 INTERGENIC
2L	11314735	2L_11314735_SNP [dm3] 2L_11314735_SNP [dm6]	T	C	7.816e^-5	0.195	INTERGENIC
2R	9713724	2R_9713724_SNP [dm3] 2R_13826219_SNP [dm6]	G	C	7.835e^-5	0.195	UPSTREAM CG6329 DOWNSTREAM CG13339 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
X	2693492	X_2693492_SNP [dm3] X_2799459_SNP [dm6]	T	C	7.845e^-5	0.195	INTRON kirre
X	12045455	X_12045455_SNP [dm3] X_12151422_SNP [dm6]	G	A	7.868e^-5	0.196	INTRON Ten-a
2L	17801454	2L_17801454_SNP [dm3] 2L_17801454_SNP [dm6]	T	A	7.877e^-5	0.196	INTRON CadN2
X	7008664	X_7008664_SNP [dm3] X_7114631_SNP [dm6]	C	G	7.906e^-5	0.196	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8972595	2L_8972595_SNP [dm3] 2L_8972595_SNP [dm6]	C	T	7.935e^-5	0.196	INTRON CG9541
X	6217808	X_6217808_SNP [dm3] X_6323775_SNP [dm6]	A	G	7.937e^-5	0.196	SYNONYMOUS_CODING CG15894	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2L	1891774	2L_1891774_SNP [dm3] 2L_1891774_SNP [dm6]	T	A	7.954e^-5	0.196	INTRON CG7337
2L	9323655	2L_9323655_SNP [dm3] 2L_9323655_SNP [dm6]	G	T	7.960e^-5	0.196	INTERGENIC
X	6091242	X_6091242_SNP [dm3] X_6197209_SNP [dm6]	T	C	7.974e^-5	0.196	SYNONYMOUS_CODING CG32751 UPSTREAM CG32750
2L	2399297	2L_2399297_SNP [dm3] 2L_2399297_SNP [dm6]	G	A	7.978e^-5	0.196	UPSTREAM VGlut INTRON VGlut
2L	17941934	2L_17941934_SNP [dm3] 2L_17941934_SNP [dm6]	G	C	8.000e^-5	0.197	INTERGENIC
2R	11831946	2R_11831946_SNP [dm3] 2R_15944441_SNP [dm6]	T	C	8.033e^-5	0.197	UTR_3_PRIME CG30093 INTRON Cyp4aa1
2L	12416524	2L_12416524_SNP [dm3] 2L_12416524_SNP [dm6]	A	C	8.060e^-5	0.197	INTRON vir-1
2R	10608287	2R_10608287_SNP [dm3] 2R_14720782_SNP [dm6]	T	C	8.072e^-5	0.197	INTERGENIC
2L	8275041	2L_8275041_SNP [dm3] 2L_8275041_SNP [dm6]	G	T	8.075e^-5	0.197	UPSTREAM Btk29A INTRON Btk29A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2R	6558234	2R_6558234_SNP [dm3] 2R_10670729_SNP [dm6]	C	A	8.084e^-5	0.197	INTERGENIC
2L	17944451	2L_17944451_SNP [dm3] 2L_17944451_SNP [dm6]	G	T	8.089e^-5	0.197	INTERGENIC
2R	16245315	2R_16245315_SNP [dm3] 2R_20357810_SNP [dm6]	T	G	8.116e^-5	0.197	INTERGENIC
X	10863550	X_10863550_SNP [dm3] X_10969517_SNP [dm6]	G	A	8.130e^-5	0.197	INTRON CG42339
X	8618594	X_8618594_SNP [dm3] X_8724561_SNP [dm6]	C	T	8.135e^-5	0.197	UPSTREAM CR43297 INTERGENIC
X	9777748	X_9777748_SNP [dm3] X_9883715_SNP [dm6]	G	A	8.154e^-5	0.197	UPSTREAM CG9691 DOWNSTREAM CG9689 INTERGENIC
3R	20199165	3R_20199165_SNP [dm3] 3R_24373443_SNP [dm6]	C	G	8.164e^-5	0.197	UPSTREAM CG17782 DOWNSTREAM CG17781 INTERGENIC
2R	10354635	2R_10354635_SNP [dm3] 2R_14467130_SNP [dm6]	A	T	8.165e^-5	0.197	INTERGENIC
2L	5688616	2L_5688616_SNP [dm3] 2L_5688616_SNP [dm6]	A	C	8.171e^-5	0.197	INTERGENIC
2R	12598555	2R_12598555_SNP [dm3] 2R_16711050_SNP [dm6]	G	A	8.183e^-5	0.198	INTRON CG30463
3R	1773589	3R_1773589_SNP [dm3] 3R_5947867_SNP [dm6]	G	T	8.207e^-5	0.198	INTRON CG34113
2R	10514828	2R_10514828_SNP [dm3] 2R_14627323_SNP [dm6]	T	C	8.250e^-5	0.198	INTERGENIC
2L	17804869	2L_17804869_SNP [dm3] 2L_17804869_SNP [dm6]	C	T	8.254e^-5	0.198	INTRON CadN2
2R	4104626	2R_4104626_SNP [dm3] 2R_8217121_SNP [dm6]	A	G	8.258e^-5	0.198	SYNONYMOUS_CODING LRP1	TF binding site mE1_TFBS_cad
2L	21276952	2L_21276952_DEL [dm3] 2L_21276952_DEL [dm6]	TAACAT	T	8.303e^-5	0.198	INTRON CG8671
3L	6565201	3L_6565201_SNP [dm3] 3L_6572101_SNP [dm6]	A	G	8.339e^-5	0.198	SYNONYMOUS_CODING jv INTRON CG18769	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	10338507	X_10338507_SNP [dm3] X_10444474_SNP [dm6]	T	G	8.361e^-5	0.198	UPSTREAM snoRNA:Me28S-A1705 INTRON CG32683
2L	20495394	2L_20495394_SNP [dm3] 2L_20495394_SNP [dm6]	C	T	8.363e^-5	0.198	SYNONYMOUS_CODING CG34007	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10692431	2R_10692431_SNP [dm3] 2R_14804926_SNP [dm6]	T	G	8.372e^-5	0.198	INTRON kn	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
2L	10377562	2L_10377562_SNP [dm3] 2L_10377562_SNP [dm6]	A	T	8.375e^-5	0.198	INTRON dpr19	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	12550716	3R_12550716_SNP [dm3] 3R_16724994_SNP [dm6]	A	G	8.375e^-5	0.198	INTRON Ubx
2L	9198999	2L_9198999_SNP [dm3] 2L_9198999_SNP [dm6]	A	G	8.380e^-5	0.198	INTRON tai
2L	5453268	2L_5453268_SNP [dm3] 2L_5453268_SNP [dm6]	G	A	8.384e^-5	0.198	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
X	9609698	X_9609698_SNP [dm3] X_9715665_SNP [dm6]	A	T	8.392e^-5	0.198	INTERGENIC
X	9609724	X_9609724_SNP [dm3] X_9715691_SNP [dm6]	G	C	8.392e^-5	0.198	INTERGENIC
X	9609768	X_9609768_SNP [dm3] X_9715735_SNP [dm6]	A	T	8.392e^-5	0.198	INTERGENIC
2R	15292708	2R_15292708_SNP [dm3] 2R_19405203_SNP [dm6]	G	A	8.392e^-5	0.198	SYNONYMOUS_CODING hts INTRON hts
2R	10612529	2R_10612529_SNP [dm3] 2R_14725024_SNP [dm6]	T	C	8.405e^-5	0.198	INTERGENIC
2R	2790068	2R_2790068_SNP [dm3] 2R_6902563_SNP [dm6]	T	C	8.410e^-5	0.198	INTRON CG30158
X	8402755	X_8402755_SNP [dm3] X_8508722_SNP [dm6]	G	C	8.414e^-5	0.198	UPSTREAM CG33181 INTRON CG33181
2L	12242545	2L_12242545_SNP [dm3] 2L_12242545_SNP [dm6]	T	A	8.443e^-5	0.198	INTRON aret	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	481672	3L_481672_SNP [dm3] 3L_481672_SNP [dm6]	A	G	8.475e^-5	0.199	INTRON klar
2L	13154467	2L_13154467_SNP [dm3] 2L_13154467_SNP [dm6]	G	A	8.478e^-5	0.199	INTERGENIC
X	1451294	X_1451294_SNP [dm3] X_1557261_SNP [dm6]	G	C	8.497e^-5	0.199	SYNONYMOUS_CODING Mur2B	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	13323226	2R_13323226_SNP [dm3] 2R_17435721_SNP [dm6]	A	C	8.500e^-5	0.199	INTRON EDTP	TF binding site BDTNP1_TFBS_dl
3R	12876924	3R_12876924_SNP [dm3] 3R_17051202_SNP [dm6]	A	G	8.508e^-5	0.199	INTERGENIC
X	10863770	X_10863770_SNP [dm3] X_10969737_SNP [dm6]	T	C	8.522e^-5	0.199	INTRON CG42339
2L	4621277	2L_4621277_SNP [dm3] 2L_4621277_SNP [dm6]	G	T	8.533e^-5	0.199	DOWNSTREAM CR44609 INTERGENIC
2L	15348712	2L_15348712_INS [dm3] 2L_15348712_INS [dm6]	G	AA	8.550e^-5	0.199	INTERGENIC
X	10272942	X_10272942_SNP [dm3] X_10378909_SNP [dm6]	T	C	8.555e^-5	0.199	NON_SYNONYMOUS_CODING CG32681 INTRON CG17841
2R	17420748	2R_17420748_DEL [dm3] 2R_21533243_DEL [dm6]	AATCGCAA	A	8.596e^-5	0.2	INTRON Egfr
2R	9713720	2R_9713720_SNP [dm3] 2R_13826215_SNP [dm6]	G	T	8.609e^-5	0.2	UPSTREAM CG6329 DOWNSTREAM CG13339 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2L	20546230	2L_20546230_SNP [dm3] 2L_20546230_SNP [dm6]	G	A	8.627e^-5	0.2	INTERGENIC
2R	13775901	2R_13775901_SNP [dm3] 2R_17888396_SNP [dm6]	G	A	8.660e^-5	0.2	SYNONYMOUS_CODING PPO1 INTRON Elk	TF binding site mE1_TFBS_cad
X	14281651	X_14281651_SNP [dm3] X_14387618_SNP [dm6]	A	C	8.664e^-5	0.2	INTRON dpr8	TF binding site BDTNP1_TFBS_Med
2L	10422751	2L_10422751_SNP [dm3] 2L_10422751_SNP [dm6]	C	T	8.736e^-5	0.202	UTR_5_PRIME pie UPSTREAM CG5168	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	13552883	2R_13552883_SNP [dm3] 2R_17665378_SNP [dm6]	C	A	8.757e^-5	0.202	UPSTREAM eIF3-S8 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_run mE1_TFBS_Trl mE1_TFBS_Ubx
2R	17903823	2R_17903823_INS [dm3] 2R_22016318_INS [dm6]	A	ACA	8.761e^-5	0.202	INTRON CG34370
2L	8327566	2L_8327566_SNP [dm3] 2L_8327566_SNP [dm6]	A	T	8.770e^-5	0.202	UTR_5_PRIME CG14275
2R	18494263	2R_18494263_SNP [dm3] 2R_22606758_SNP [dm6]	G	C	8.801e^-5	0.202	UPSTREAM snoRNA:Me28S-G2173 & 4 others INTRON RpS16	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_sens
2L	9453225	2L_9453225_SNP [dm3] 2L_9453225_SNP [dm6]	C	T	8.807e^-5	0.202	INTRON numb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	21294623	X_21294623_SNP [dm3] X_21423596_SNP [dm6]	T	C	8.813e^-5	0.202	UTR_3_PRIME CG42343
2L	8647703	2L_8647703_SNP [dm3] 2L_8647703_SNP [dm6]	C	G	8.817e^-5	0.202	INTRON Sema-1a
2R	14940830	2R_14940830_SNP [dm3] 2R_19053325_SNP [dm6]	C	T	8.862e^-5	0.202	INTERGENIC
2R	11340257	2R_11340257_SNP [dm3] 2R_15452752_SNP [dm6]	C	T	8.892e^-5	0.203	INTRON CG43729
2L	9200031	2L_9200031_DEL [dm3] 2L_9200031_DEL [dm6]	AT	A	8.970e^-5	0.203	INTRON tai
3L	481671	3L_481671_SNP [dm3] 3L_481671_SNP [dm6]	A	G	8.971e^-5	0.203	INTRON klar
2R	1442814	2R_1442814_SNP [dm3] 2R_5555309_SNP [dm6]	C	T	8.980e^-5	0.203	INTERGENIC
X	17253451	X_17253451_SNP [dm3] X_17359418_SNP [dm6]	T	A	8.983e^-5	0.203	INTERGENIC
X	1425933	X_1425933_SNP [dm3] X_1531900_SNP [dm6]	C	T	8.988e^-5	0.203	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
X	1426671	X_1426671_SNP [dm3] X_1532638_SNP [dm6]	G	A	8.988e^-5	0.203	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
X	1453943	X_1453943_SNP [dm3] X_1559910_SNP [dm6]	C	T	8.988e^-5	0.203	INTRON Mur2B
X	1457067	X_1457067_SNP [dm3] X_1563034_SNP [dm6]	C	T	8.988e^-5	0.203	INTRON Mur2B	TF binding site mE1_TFBS_chinmo
X	9943469	X_9943469_SNP [dm3] X_10049436_SNP [dm6]	C	G	9.014e^-5	0.203	INTRON Cht6
2R	14053124	2R_14053124_SNP [dm3] 2R_18165619_SNP [dm6]	T	G	9.035e^-5	0.203	SYNONYMOUS_CODING Nup75 DOWNSTREAM CG10915
3L	18953419	3L_18953419_SNP [dm3] 3L_18960319_SNP [dm6]	G	C	9.043e^-5	0.203	INTERGENIC
2L	9082409	2L_9082409_SNP [dm3] 2L_9082409_SNP [dm6]	A	C	9.045e^-5	0.203	INTERGENIC
3R	12553458	3R_12553458_SNP [dm3] 3R_16727736_SNP [dm6]	C	T	9.118e^-5	0.205	INTRON Ubx	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	9221992	2R_9221992_SNP [dm3] 2R_13334487_SNP [dm6]	C	T	9.122e^-5	0.205	INTRON CR44206
2L	14458135	2L_14458135_SNP [dm3] 2L_14458135_SNP [dm6]	C	A	9.126e^-5	0.205	DOWNSTREAM CR44730 INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_cad mE1_TFBS_inv mE1_TFBS_sens
2L	13972051	2L_13972051_SNP [dm3] 2L_13972051_SNP [dm6]	T	C	9.148e^-5	0.205	UTR_3_PRIME NimB5 DOWNSTREAM He & 1 other
2R	14308009	2R_14308009_SNP [dm3] 2R_18420504_SNP [dm6]	A	G	9.153e^-5	0.205	UTR_3_PRIME Dp1 UPSTREAM CG5174
2L	17088640	2L_17088640_SNP [dm3] 2L_17088640_SNP [dm6]	G	A	9.174e^-5	0.205	UTR_3_PRIME CG12620
2L	10330635	2L_10330635_SNP [dm3] 2L_10330635_SNP [dm6]	C	A	9.177e^-5	0.205	UPSTREAM CG5037 INTRON CG5375
2R	3583523	2R_3583523_DEL [dm3] 2R_7696018_DEL [dm6]	AGC	G	9.213e^-5	0.205	UPSTREAM CG1399 INTRON CG1399
3R	24938082	3R_24938082_SNP [dm3] 3R_29112360_SNP [dm6]	G	T	9.229e^-5	0.205	UPSTREAM CG11876 INTRON alpha-Man-Ib	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	885475	3L_885475_SNP [dm3] 3L_885475_SNP [dm6]	T	C	9.231e^-5	0.205	INTRON CG32479
2L	21952810	2L_21952810_SNP [dm3] 2L_21952810_SNP [dm6]	T	A	9.235e^-5	0.205	INTERGENIC
X	19037852	X_19037852_SNP [dm3] X_19143819_SNP [dm6]	T	A	9.256e^-5	0.205	INTRON RhoGAP18B	TF binding site BDTNP1_TFBS_sna
2R	10520804	2R_10520804_SNP [dm3] 2R_14633299_SNP [dm6]	C	G	9.275e^-5	0.205	INTERGENIC
2R	3836505	2R_3836505_SNP [dm3] 2R_7949000_SNP [dm6]	G	C	9.277e^-5	0.205	UPSTREAM CG11165 INTRON CG14764	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2R	11904215	2R_11904215_SNP [dm3] 2R_16016710_SNP [dm6]	T	C	9.290e^-5	0.205	DOWNSTREAM Rrp42 INTRON CG8397
2L	10433373	2L_10433373_SNP [dm3] 2L_10433373_SNP [dm6]	G	A	9.311e^-5	0.205	SYNONYMOUS_CODING CG5337 DOWNSTREAM TfIIB	TF binding site mE1_TFBS_cad
3L	11617099	3L_11617099_SNP [dm3] 3L_11623999_SNP [dm6]	A	G	9.321e^-5	0.205	UPSTREAM CG6084 DOWNSTREAM CG6083 INTRON CG6084
2R	7989757	2R_7989757_SNP [dm3] 2R_12102252_SNP [dm6]	A	G	9.331e^-5	0.205	INTRON jeb	TF binding site BDTNP1_TFBS_dl
X	2695509	X_2695509_SNP [dm3] X_2801476_SNP [dm6]	C	G	9.337e^-5	0.205	INTRON kirre
2R	14009632	2R_14009632_SNP [dm3] 2R_18122127_SNP [dm6]	G	T	9.357e^-5	0.205	SYNONYMOUS_CODING stau	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	9323984	2L_9323984_SNP [dm3] 2L_9323984_SNP [dm6]	A	C	9.365e^-5	0.205	INTERGENIC
2L	5864887	2L_5864887_SNP [dm3] 2L_5864887_SNP [dm6]	C	T	9.387e^-5	0.205	INTRON rau	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	9635443	2R_9635443_SNP [dm3] 2R_13747938_SNP [dm6]	G	A	9.398e^-5	0.205	UTR_3_PRIME fas
3R	12873708	3R_12873708_SNP [dm3] 3R_17047986_SNP [dm6]	T	A	9.399e^-5	0.205	UTR_3_PRIME Patr-1 DOWNSTREAM Patr-1	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
2L	9242445	2L_9242445_SNP [dm3] 2L_9242445_SNP [dm6]	A	G	9.417e^-5	0.205	SYNONYMOUS_CODING tai	TF binding site mE1_TFBS_chinmo
2R	7301884	2R_7301884_SNP [dm3] 2R_11414379_SNP [dm6]	A	G	9.418e^-5	0.205	UPSTREAM CG7763 INTRON Drip
2R	14940840	2R_14940840_SNP [dm3] 2R_19053335_SNP [dm6]	G	A	9.437e^-5	0.205	INTERGENIC
2R	13139645	2R_13139645_SNP [dm3] 2R_17252140_SNP [dm6]	A	C	9.452e^-5	0.205	INTRON mbl
3L	11708590	3L_11708590_SNP [dm3] 3L_11715490_SNP [dm6]	G	A	9.462e^-5	0.205	UPSTREAM CG14132 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	9352315	2R_9352315_SNP [dm3] 2R_13464810_SNP [dm6]	T	G	9.473e^-5	0.205	INTRON arr	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	11943177	3L_11943177_SNP [dm3] 3L_11950077_SNP [dm6]	C	T	9.486e^-5	0.205	SYNONYMOUS_CODING CG17826 DOWNSTREAM CG7252
2R	10594655	2R_10594655_SNP [dm3] 2R_14707150_SNP [dm6]	C	T	9.490e^-5	0.205	INTRON mspo
X	17253456	X_17253456_SNP [dm3] X_17359423_SNP [dm6]	T	A	9.490e^-5	0.205	INTERGENIC
2R	9350562	2R_9350562_SNP [dm3] 2R_13463057_SNP [dm6]	A	G	9.498e^-5	0.205	INTRON arr
2L	743500	2L_743500_SNP [dm3] 2L_743500_SNP [dm6]	A	T	9.526e^-5	0.205	UTR_5_PRIME Eaat2
2L	6673933	2L_6673933_SNP [dm3] 2L_6673933_SNP [dm6]	T	A	9.527e^-5	0.205	UPSTREAM CG34310 & 1 other DOWNSTREAM cort INTRON cup & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Ubx
2L	8396799	2L_8396799_SNP [dm3] 2L_8396799_SNP [dm6]	G	T	9.578e^-5	0.206	SYNONYMOUS_CODING CG13385 UPSTREAM Peritrophin-15a	TF binding site mE1_TFBS_cad
3L	2943965	3L_2943965_INS [dm3] 3L_2943965_INS [dm6]	A	AA	9.607e^-5	0.206	INTRON Shab
2R	9496953	2R_9496953_SNP [dm3] 2R_13609448_SNP [dm6]	A	G	9.610e^-5	0.206	UPSTREAM CG12464 INTERGENIC
X	1445849	X_1445849_SNP [dm3] X_1551816_SNP [dm6]	G	A	9.641e^-5	0.206	DOWNSTREAM Mur2B INTRON Mur2B	TF binding site BDTNP1_TFBS_da mE1_TFBS_chinmo
2L	9157287	2L_9157287_SNP [dm3] 2L_9157287_SNP [dm6]	G	A	9.652e^-5	0.206	INTRON CG32982
X	18108947	X_18108947_SNP [dm3] X_18214914_SNP [dm6]	C	A	9.656e^-5	0.206	INTRON CG33639
X	17726152	X_17726152_SNP [dm3] X_17832119_SNP [dm6]	C	G	9.669e^-5	0.206	INTRON CG6398	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	8534145	2L_8534145_SNP [dm3] 2L_8534145_SNP [dm6]	T	C	9.683e^-5	0.206	INTRON CG17834	TF binding site mE1_TFBS_cad mE1_TFBS_cnc
3L	10748823	3L_10748823_SNP [dm3] 3L_10755723_SNP [dm6]	C	T	9.689e^-5	0.206	INTERGENIC
3R	12873702	3R_12873702_SNP [dm3] 3R_17047980_SNP [dm6]	C	T	9.695e^-5	0.206	UTR_3_PRIME Patr-1 DOWNSTREAM Patr-1	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
2L	1759333	2L_1759333_SNP [dm3] 2L_1759333_SNP [dm6]	G	A	9.700e^-5	0.206	UPSTREAM CG17650 INTERGENIC
2L	8473952	2L_8473952_SNP [dm3] 2L_8473952_SNP [dm6]	T	C	9.712e^-5	0.206	INTRON d
2R	9768552	2R_9768552_SNP [dm3] 2R_13881047_SNP [dm6]	G	A	9.713e^-5	0.206	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	8989274	2L_8989274_SNP [dm3] 2L_8989274_SNP [dm6]	G	T	9.735e^-5	0.207	UTR_5_PRIME rost UPSTREAM rost INTRON rost
X	15995067	X_15995067_SNP [dm3] X_16101034_SNP [dm6]	A	G	9.771e^-5	0.207	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	9352710	2L_9352710_SNP [dm3] 2L_9352710_SNP [dm6]	T	C	9.814e^-5	0.207	INTERGENIC
4	442889	4_442889_DEL [dm3] 4_422263_DEL [dm6]	AA	T	9.816e^-5	0.207	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	10154268	2R_10154268_SNP [dm3] 2R_14266763_SNP [dm6]	T	C	9.843e^-5	0.207	INTRON CG8547
2R	15273172	2R_15273172_SNP [dm3] 2R_19385667_SNP [dm6]	T	C	9.848e^-5	0.207	UPSTREAM CG10081 DOWNSTREAM CG10073 INTERGENIC
2L	19898616	2L_19898616_SNP [dm3] 2L_19898616_SNP [dm6]	C	T	9.848e^-5	0.207	INTRON sick
X	16159947	X_16159947_SNP [dm3] X_16265914_SNP [dm6]	C	T	9.853e^-5	0.207	INTRON CG12507
2L	9303748	2L_9303748_INS [dm3] 2L_9303748_INS [dm6]	G	GTCGTGGCAATG...	9.856e^-5	0.207	DOWNSTREAM CR42844 INTERGENIC
2R	10169301	2R_10169301_SNP [dm3] 2R_14281796_SNP [dm6]	T	A	9.863e^-5	0.207	INTRON Ih	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	16255376	2L_16255376_SNP [dm3] 2L_16255376_SNP [dm6]	A	C	9.867e^-5	0.207	INTRON PRL-1	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_zfh1
2L	9082510	2L_9082510_SNP [dm3] 2L_9082510_SNP [dm6]	A	T	9.871e^-5	0.207	INTERGENIC
2R	14852475	2R_14852475_SNP [dm3] 2R_18964970_SNP [dm6]	T	C	9.908e^-5	0.207	INTERGENIC	TF binding site mE1_TFBS_cnc
2R	14852532	2R_14852532_SNP [dm3] 2R_18965027_SNP [dm6]	T	A	9.908e^-5	0.207	INTERGENIC	TF binding site mE1_TFBS_cnc
2L	8385571	2L_8385571_SNP [dm3] 2L_8385571_SNP [dm6]	G	A	9.959e^-5	0.208	UPSTREAM CG13384 INTRON CG13384	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9214845	2L_9214845_SNP [dm3] 2L_9214845_SNP [dm6]	T	A	9.961e^-5	0.208	INTRON tai
2R	9761981	2R_9761981_SNP [dm3] 2R_13874476_SNP [dm6]	A	C	9.965e^-5	0.208	INTRON shot	TF binding site mE1_TFBS_cad
2L	5864230	2L_5864230_SNP [dm3] 2L_5864230_SNP [dm6]	G	T	9.970e^-5	0.208	INTRON rau
2R	10569737	2R_10569737_SNP [dm3] 2R_14682232_SNP [dm6]	T	A	9.999e^-5	0.208	INTRON mspo
2L	20769767	2L_20769767_SNP [dm3] 2L_20769767_SNP [dm6]	T	A	1.001e^-4	0.208	UPSTREAM cad INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2R	10647273	2R_10647273_SNP [dm3] 2R_14759768_SNP [dm6]	G	A	1.001e^-4	0.208	UTR_3_PRIME Spred UPSTREAM CG12857
X	9584618	X_9584618_SNP [dm3] X_9690585_SNP [dm6]	C	T	1.003e^-4	0.208	DOWNSTREAM CR44016 INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
2L	8534128	2L_8534128_SNP [dm3] 2L_8534128_SNP [dm6]	T	C	1.003e^-4	0.208	INTRON CG17834	TF binding site mE1_TFBS_cad mE1_TFBS_cnc
2R	8835958	2R_8835958_SNP [dm3] 2R_12948453_SNP [dm6]	G	T	1.005e^-4	0.208	UTR_3_PRIME CG44251	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26764213	3R_26764213_SNP [dm3] 3R_30938491_SNP [dm6]	G	T	1.008e^-4	0.208	INTERGENIC
X	1456023	X_1456023_SNP [dm3] X_1561990_SNP [dm6]	C	T	1.009e^-4	0.208	INTRON Mur2B
2R	13848771	2R_13848771_SNP [dm3] 2R_17961266_SNP [dm6]	G	C	1.010e^-4	0.208	INTERGENIC
X	12534173	X_12534173_SNP [dm3] X_12640140_SNP [dm6]	G	C	1.012e^-4	0.208	INTRON Tomosyn
X	9471620	X_9471620_SNP [dm3] X_9577587_SNP [dm6]	G	T	1.012e^-4	0.208	INTRON CG32699
2L	6001191	2L_6001191_SNP [dm3] 2L_6001191_SNP [dm6]	C	T	1.013e^-4	0.208	SYNONYMOUS_CODING Tsp26A INTRON Tsp26A	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	1448403	X_1448403_SNP [dm3] X_1554370_SNP [dm6]	T	A	1.019e^-4	0.209	SYNONYMOUS_CODING Mur2B INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2L	10630316	2L_10630316_SNP [dm3] 2L_10630316_SNP [dm6]	C	T	1.021e^-4	0.209	SYNONYMOUS_CODING CG7329	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	1748685	2L_1748685_SNP [dm3] 2L_1748685_SNP [dm6]	C	A	1.022e^-4	0.209	INTRON CG17646
X	6333675	X_6333675_INS [dm3] X_6439642_INS [dm6]	A	ATTGGTTTATGGCA...	1.024e^-4	0.209	INTRON CG42340
3R	12869051	3R_12869051_SNP [dm3] 3R_17043329_SNP [dm6]	C	A	1.025e^-4	0.209	UPSTREAM Patr-1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2R	14157314	2R_14157314_SNP [dm3] 2R_18269809_SNP [dm6]	C	G	1.026e^-4	0.209	INTERGENIC
2R	17062887	2R_17062887_SNP [dm3] 2R_21175382_SNP [dm6]	C	T	1.026e^-4	0.209	UTR_5_PRIME Pu DOWNSTREAM Xpd	TF binding site mE1_TFBS_Trl
2L	8534221	2L_8534221_SNP [dm3] 2L_8534221_SNP [dm6]	C	T	1.030e^-4	0.21	INTRON CG17834	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_cnc
2L	5688545	2L_5688545_SNP [dm3] 2L_5688545_SNP [dm6]	C	T	1.031e^-4	0.21	INTERGENIC
2L	18276185	2L_18276185_INS [dm3] 2L_18276185_INS [dm6]	T	TAT	1.035e^-4	0.21	UPSTREAM CG42750 INTERGENIC
X	11992476	X_11992476_SNP [dm3] X_12098443_SNP [dm6]	G	T	1.035e^-4	0.21	INTRON CR43960 & 1 other
2L	7775314	2L_7775314_SNP [dm3] 2L_7775314_SNP [dm6]	A	G	1.036e^-4	0.21	DOWNSTREAM CG7179 & 1 other INTERGENIC
2R	15096125	2R_15096125_SNP [dm3] 2R_19208620_SNP [dm6]	T	G	1.039e^-4	0.21	INTRON hppy
2L	1743808	2L_1743808_SNP [dm3] 2L_1743808_SNP [dm6]	C	G	1.040e^-4	0.21	INTRON CG17646
2L	11314737	2L_11314737_SNP [dm3] 2L_11314737_SNP [dm6]	T	C	1.041e^-4	0.21	INTERGENIC
X	1448349	X_1448349_SNP [dm3] X_1554316_SNP [dm6]	G	T	1.041e^-4	0.21	NON_SYNONYMOUS_CODING Mur2B INTRON Mur2B	TF binding site mE1_TFBS_chinmo
2R	11055507	2R_11055507_SNP [dm3] 2R_15168002_SNP [dm6]	T	A	1.044e^-4	0.21	INTRON igl
X	18067380	X_18067380_SNP [dm3] X_18173347_SNP [dm6]	C	T	1.044e^-4	0.21	UTR_3_PRIME Frq1
X	18067549	X_18067549_INS [dm3] X_18173516_INS [dm6]	A	ATATGCAAA	1.044e^-4	0.21	UTR_3_PRIME Frq1
2L	13972048	2L_13972048_SNP [dm3] 2L_13972048_SNP [dm6]	A	C	1.046e^-4	0.21	UTR_3_PRIME NimB5 DOWNSTREAM He & 1 other
2L	9454157	2L_9454157_SNP [dm3] 2L_9454157_SNP [dm6]	G	A	1.053e^-4	0.211	INTRON numb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens
X	9777750	X_9777750_SNP [dm3] X_9883717_SNP [dm6]	A	G	1.057e^-4	0.212	UPSTREAM CG9691 DOWNSTREAM CG9689 INTERGENIC
X	9678374	X_9678374_SNP [dm3] X_9784341_SNP [dm6]	C	A	1.063e^-4	0.213	INTRON CG32698	TF binding site mE1_TFBS_inv
X	9986082	X_9986082_SNP [dm3] X_10092049_SNP [dm6]	T	G	1.064e^-4	0.213	INTRON RhoU	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	5142183	3L_5142183_SNP [dm3] 3L_5149083_SNP [dm6]	G	T	1.071e^-4	0.214	SYNONYMOUS_CODING Aats-ala-m DOWNSTREAM Gen	TF binding site mE1_TFBS_chinmo
3L	817771	3L_817771_SNP [dm3] 3L_817771_SNP [dm6]	C	T	1.079e^-4	0.215	INTERGENIC
2L	19330579	2L_19330579_SNP [dm3] 2L_19330579_SNP [dm6]	G	A	1.080e^-4	0.215	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10968616	X_10968616_SNP [dm3] X_11074583_SNP [dm6]	G	A	1.081e^-4	0.215	SYNONYMOUS_CODING sev	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
X	9585081	X_9585081_SNP [dm3] X_9691048_SNP [dm6]	T	A	1.085e^-4	0.216	DOWNSTREAM CR44016 INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	11652740	X_11652740_SNP [dm3] X_11758707_SNP [dm6]	T	C	1.086e^-4	0.216	INTRON m
2L	13873385	2L_13873385_SNP [dm3] 2L_13873385_SNP [dm6]	A	C	1.086e^-4	0.216	INTRON CenG1A
3L	16173441	3L_16173441_DEL [dm3] 3L_16180341_DEL [dm6]	GTTTGGCAAG	G	1.086e^-4	0.216	INTERGENIC	TF binding site mE1_TFBS_inv
2L	5725676	2L_5725676_SNP [dm3] 2L_5725676_SNP [dm6]	T	A	1.095e^-4	0.217	DOWNSTREAM CG14006 INTRON CG11030
X	10721448	X_10721448_SNP [dm3] X_10827415_SNP [dm6]	A	T	1.096e^-4	0.217	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	12163177	2L_12163177_SNP [dm3] 2L_12163177_SNP [dm6]	T	C	1.097e^-4	0.217	DOWNSTREAM CG31861 INTRON CG31760
X	5402873	X_5402873_SNP [dm3] X_5508840_SNP [dm6]	T	C	1.098e^-4	0.217	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	7735759	X_7735759_SNP [dm3] X_7841726_SNP [dm6]	C	G	1.099e^-4	0.217	UTR_3_PRIME CG1402
3L	5718032	3L_5718032_SNP [dm3] 3L_5724932_SNP [dm6]	G	T	1.102e^-4	0.217	INTRON sif
X	15995070	X_15995070_SNP [dm3] X_16101037_SNP [dm6]	T	G	1.102e^-4	0.217	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	16026205	2R_16026205_SNP [dm3] 2R_20138700_SNP [dm6]	G	A	1.106e^-4	0.218	DOWNSTREAM CR44636 INTERGENIC
2L	9378395	2L_9378395_SNP [dm3] 2L_9378395_SNP [dm6]	C	T	1.108e^-4	0.218	INTRON Shawl
2R	13323664	2R_13323664_SNP [dm3] 2R_17436159_SNP [dm6]	G	C	1.109e^-4	0.218	INTRON EDTP	TF binding site BDTNP1_TFBS_dl
2R	6561172	2R_6561172_DEL [dm3] 2R_10673667_DEL [dm6]	CC	C	1.110e^-4	0.218	UTR_5_PRIME stan	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	13514431	2R_13514431_SNP [dm3] 2R_17626926_SNP [dm6]	A	G	1.113e^-4	0.218	INTRON CG10936
3R	9725977	3R_9725977_SNP [dm3] 3R_13900255_SNP [dm6]	T	A	1.114e^-4	0.218	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	13948918	2R_13948918_SNP [dm3] 2R_18061413_SNP [dm6]	T	C	1.118e^-4	0.219	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	5720936	2L_5720936_SNP [dm3] 2L_5720936_SNP [dm6]	T	C	1.120e^-4	0.219	UPSTREAM sip1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
2R	10371677	2R_10371677_SNP [dm3] 2R_14484172_SNP [dm6]	G	T	1.124e^-4	0.219	INTRON L	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	22411825	X_22411825_INS [dm3] X_23009989_INS [dm6]	A	ATGTAATAAGTAATAAGGTT...	1.125e^-4	0.219	UPSTREAM CR45010 DOWNSTREAM CR45009	TF binding site BDTNP1_TFBS_dl
2L	14087891	2L_14087891_SNP [dm3] 2L_14087891_SNP [dm6]	G	T	1.125e^-4	0.219	INTRON nAChRalpha5
2R	10534606	2R_10534606_SNP [dm3] 2R_14647101_SNP [dm6]	G	A	1.129e^-4	0.219	DOWNSTREAM CG10139 INTERGENIC
3R	22551772	3R_22551772_SNP [dm3] 3R_26726050_SNP [dm6]	G	T	1.130e^-4	0.219	UPSTREAM CG14244 & 1 other INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	4059733	3R_4059733_DEL [dm3] 3R_8234011_DEL [dm6]	AA	A	1.130e^-4	0.219	UPSTREAM CR45549 INTRON DNApol-iota	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
2L	17045232	2L_17045232_SNP [dm3] 2L_17045232_SNP [dm6]	T	A	1.138e^-4	0.22	INTERGENIC
2R	2829371	2R_2829371_SNP [dm3] 2R_6941866_SNP [dm6]	G	C	1.138e^-4	0.22	INTRON mim
2L	5708796	2L_5708796_SNP [dm3] 2L_5708796_SNP [dm6]	G	A	1.139e^-4	0.22	INTRON CG7236
2L	14134567	2L_14134567_SNP [dm3] 2L_14134567_SNP [dm6]	C	T	1.140e^-4	0.22	UTR_5_PRIME CG17341	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	11055512	2R_11055512_SNP [dm3] 2R_15168007_SNP [dm6]	T	C	1.141e^-4	0.22	INTRON igl
2R	13094648	2R_13094648_SNP [dm3] 2R_17207143_SNP [dm6]	G	C	1.141e^-4	0.22	INTERGENIC
2L	5725785	2L_5725785_SNP [dm3] 2L_5725785_SNP [dm6]	A	T	1.141e^-4	0.22	DOWNSTREAM CG14006 INTRON CG11030
2L	5726280	2L_5726280_DEL [dm3] 2L_5726280_DEL [dm6]	ATTTTAAACTGTTAT...	A	1.141e^-4	0.22	DOWNSTREAM CG14006 INTRON CG11030
2L	9096315	2L_9096315_SNP [dm3] 2L_9096315_SNP [dm6]	A	T	1.143e^-4	0.22	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	13848353	2R_13848353_SNP [dm3] 2R_17960848_SNP [dm6]	G	A	1.146e^-4	0.22	INTERGENIC
2R	14953540	2R_14953540_SNP [dm3] 2R_19066035_SNP [dm6]	C	A	1.150e^-4	0.221	INTERGENIC
3R	12550186	3R_12550186_SNP [dm3] 3R_16724464_SNP [dm6]	C	G	1.152e^-4	0.221	INTRON Ubx
X	10253192	X_10253192_SNP [dm3] X_10359159_SNP [dm6]	T	G	1.154e^-4	0.221	INTRON l_1_G0289
3R	21042337	3R_21042337_SNP [dm3] 3R_25216615_SNP [dm6]	C	T	1.154e^-4	0.221	SYNONYMOUS_CODING CG31106
2R	2777936	2R_2777936_SNP [dm3] 2R_6890431_SNP [dm6]	C	A	1.162e^-4	0.222	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	8666185	2R_8666185_INS [dm3] 2R_12778680_INS [dm6]	G	GATGTG	1.165e^-4	0.222	EXON CR45266	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
X	14281645	X_14281645_SNP [dm3] X_14387612_SNP [dm6]	G	A	1.166e^-4	0.222	INTRON dpr8	TF binding site BDTNP1_TFBS_Med
2R	5933811	2R_5933811_SNP [dm3] 2R_10046306_SNP [dm6]	T	A	1.168e^-4	0.223	INTRON oys	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
2L	10705349	2L_10705349_SNP [dm3] 2L_10705349_SNP [dm6]	T	C	1.169e^-4	0.223	SYNONYMOUS_CODING Lip2 DOWNSTREAM CG6415	TF binding site mE1_TFBS_chinmo
X	9570940	X_9570940_SNP [dm3] X_9676907_SNP [dm6]	C	T	1.172e^-4	0.223	SYNONYMOUS_CODING nej	TF binding site mE1_TFBS_sens
2L	6955724	2L_6955724_SNP [dm3] 2L_6955724_SNP [dm6]	G	A	1.175e^-4	0.223	SYNONYMOUS_CODING CG13775	TF binding site mE1_TFBS_sens
3L	5873662	3L_5873662_SNP [dm3] 3L_5880562_SNP [dm6]	A	G	1.177e^-4	0.223	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	5726296	2L_5726296_SNP [dm3] 2L_5726296_SNP [dm6]	T	A	1.178e^-4	0.223	DOWNSTREAM CG14006 INTRON CG11030
2L	8275268	2L_8275268_SNP [dm3] 2L_8275268_SNP [dm6]	G	A	1.181e^-4	0.223	INTRON Btk29A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2R	4894743	2R_4894743_SNP [dm3] 2R_9007238_SNP [dm6]	C	A	1.182e^-4	0.223	UTR_3_PRIME CG8172 UPSTREAM Np	TF binding site BDTNP1_TFBS_twi mE1_TFBS_Trl
3R	15890634	3R_15890634_SNP [dm3] 3R_20064912_SNP [dm6]	C	T	1.182e^-4	0.223	INTERGENIC
2R	17775940	2R_17775940_SNP [dm3] 2R_21888435_SNP [dm6]	G	A	1.182e^-4	0.223	INTRON Fili
3L	18306038	3L_18306038_SNP [dm3] 3L_18312938_SNP [dm6]	C	T	1.184e^-4	0.223	INTERGENIC
2R	13323593	2R_13323593_SNP [dm3] 2R_17436088_SNP [dm6]	G	A	1.190e^-4	0.224	INTRON EDTP	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	10657153	3L_10657153_INS [dm3] 3L_10664053_INS [dm6]	G	GTA	1.193e^-4	0.224	UPSTREAM simj DOWNSTREAM CG8003 INTRON CG32068	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_hkb mE1_TFBS_Trl
2L	14457964	2L_14457964_SNP [dm3] 2L_14457964_SNP [dm6]	T	G	1.194e^-4	0.224	DOWNSTREAM CR44730 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
X	8927487	X_8927487_SNP [dm3] X_9033454_SNP [dm6]	G	C	1.194e^-4	0.224	INTRON CR43836 & 1 other
2R	13664578	2R_13664578_SNP [dm3] 2R_17777073_SNP [dm6]	T	G	1.195e^-4	0.224	NON_SYNONYMOUS_CODING fab1 UTR_3_PRIME CG33981	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	19132234	3R_19132234_SNP [dm3] 3R_23306512_SNP [dm6]	A	T	1.196e^-4	0.224	INTRON pnt

By genomic position
Variant impact
Gene name

Delta_Alive.at.48h Experience 1 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results