©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Covariate | p-value | Significance |
---|---|---|
In_3R_Mo | 0.02104 |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2R | 6622403 | 2R_6622403_SNP [dm3] 2R_10734898_SNP [dm6] | C | T | 1.892e-6 | 0.781 |
UPSTREAM
CG7220 INTRON CG7220 |
||
2L | 5459601 | 2L_5459601_SNP [dm3] 2L_5459601_SNP [dm6] | T | C | 3.525e-6 | 0.781 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
|
|
X | 14748120 | X_14748120_SNP [dm3] X_14854087_SNP [dm6] | A | G | 4.143e-6 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
X | 14748327 | X_14748327_SNP [dm3] X_14854294_SNP [dm6] | A | T | 4.143e-6 | 0.781 |
DOWNSTREAM
CG9519 INTRON Flo2 |
||
3L | 7449822 | 3L_7449822_SNP [dm3] 3L_7456722_SNP [dm6] | A | G | 4.312e-6 | 0.781 |
SYNONYMOUS_CODING
ppk26 |
||
3L | 7449825 | 3L_7449825_SNP [dm3] 3L_7456725_SNP [dm6] | C | T | 4.312e-6 | 0.781 |
SYNONYMOUS_CODING
ppk26 |
||
X | 20286602 | X_20286602_SNP [dm3] X_20415575_SNP [dm6] | G | A | 5.365e-6 | 0.781 |
UPSTREAM
Obp19a INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site mE1_TFBS_cad mE1_TFBS_chinmo |
|
X | 14748016 | X_14748016_SNP [dm3] X_14853983_SNP [dm6] | C | A | 5.382e-6 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
2R | 7266250 | 2R_7266250_SNP [dm3] 2R_11378745_SNP [dm6] | C | A | 6.429e-6 | 0.781 |
INTRON
Tsp47F |
||
3L | 11388928 | 3L_11388928_SNP [dm3] 3L_11395828_SNP [dm6] | A | G | 7.184e-6 | 0.781 |
DOWNSTREAM
CG11726 INTERGENIC |
||
X | 14747743 | X_14747743_SNP [dm3] X_14853710_SNP [dm6] | A | G | 7.272e-6 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
3L | 22839348 | 3L_22839348_SNP [dm3] 3L_22846248_SNP [dm6] | G | C | 7.502e-6 | 0.781 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 6622249 | 2R_6622249_INS [dm3] 2R_10734744_INS [dm6] | A | AA | 7.642e-6 | 0.781 |
UPSTREAM
CG7220 INTRON CG7220 |
||
2R | 6622252 | 2R_6622252_MNP [dm3] 2R_10734747_MNP [dm6] | TAC | GTA | 7.642e-6 | 0.781 |
UPSTREAM
CG7220 INTRON CG7220 |
||
2R | 6622259 | 2R_6622259_SNP [dm3] 2R_10734754_SNP [dm6] | C | G | 7.642e-6 | 0.781 |
UPSTREAM
CG7220 INTRON CG7220 |
||
3L | 22831215 | 3L_22831215_SNP [dm3] 3L_22838115_SNP [dm6] | C | A | 9.497e-6 | 0.781 |
UTR_3_PRIME
CG11226 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2R | 10529846 | 2R_10529846_SNP [dm3] 2R_14642341_SNP [dm6] | T | G | 9.766e-6 | 0.781 |
INTERGENIC
|
||
2R | 10529851 | 2R_10529851_SNP [dm3] 2R_14642346_SNP [dm6] | A | G | 9.766e-6 | 0.781 |
INTERGENIC
|
||
X | 14748377 | X_14748377_SNP [dm3] X_14854344_SNP [dm6] | T | C | 1.126e-5 | 0.781 |
UTR_3_PRIME
CG9519 INTRON Flo2 |
||
X | 14746199 | X_14746199_SNP [dm3] X_14852166_SNP [dm6] | C | T | 1.155e-5 | 0.781 |
SYNONYMOUS_CODING
CG9521 INTRON Flo2 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
X | 14748166 | X_14748166_SNP [dm3] X_14854133_SNP [dm6] | G | T | 1.164e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
X | 14748179 | X_14748179_SNP [dm3] X_14854146_SNP [dm6] | A | T | 1.164e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
X | 14748180 | X_14748180_SNP [dm3] X_14854147_SNP [dm6] | C | T | 1.164e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
2L | 11609712 | 2L_11609712_SNP [dm3] 2L_11609712_SNP [dm6] | T | C | 1.274e-5 | 0.781 |
DOWNSTREAM
spag4 INTRON kek2 |
TF binding site
mE1_TFBS_inv
|
|
2R | 10454281 | 2R_10454281_SNP [dm3] 2R_14566776_SNP [dm6] | G | C | 1.396e-5 | 0.781 |
INTRON
ttv |
||
3L | 22840382 | 3L_22840382_SNP [dm3] 3L_22847282_SNP [dm6] | G | T | 1.435e-5 | 0.781 |
DOWNSTREAM
tRNA:CR32460 INTERGENIC |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
X | 14747991 | X_14747991_SNP [dm3] X_14853958_SNP [dm6] | T | C | 1.564e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
X | 14747941 | X_14747941_SNP [dm3] X_14853908_SNP [dm6] | T | A | 1.745e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
3R | 10915767 | 3R_10915767_DEL [dm3] 3R_15090045_DEL [dm6] | ATAGATTCAATTCTACA... | A | 1.746e-5 | 0.781 |
INTRON
CG6966 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 11359686 | 3L_11359686_SNP [dm3] 3L_11366586_SNP [dm6] | T | G | 1.776e-5 | 0.781 |
DOWNSTREAM
CR45036 INTERGENIC |
TF binding site
mE1_TFBS_inv
|
|
X | 14747757 | X_14747757_SNP [dm3] X_14853724_SNP [dm6] | T | C | 1.915e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
3L | 19917857 | 3L_19917857_DEL [dm3] 3L_19924757_DEL [dm6] | TA | G | 1.970e-5 | 0.781 |
UPSTREAM
Grasp65 DOWNSTREAM CG7770 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl
|
|
X | 12438864 | X_12438864_SNP [dm3] X_12544831_SNP [dm6] | T | A | 1.971e-5 | 0.781 |
INTRON
CG43921 |
||
X | 14748028 | X_14748028_SNP [dm3] X_14853995_SNP [dm6] | G | T | 2.000e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
X | 17181219 | X_17181219_SNP [dm3] X_17287186_SNP [dm6] | G | A | 2.073e-5 | 0.781 |
SYNONYMOUS_CODING
Fim INTRON CG5445 |
TF binding site
mE1_TFBS_HSA
|
|
X | 2908434 | X_2908434_SNP [dm3] X_3014401_SNP [dm6] | G | A | 2.121e-5 | 0.781 |
INTRON
kirre |
||
3R | 26077306 | 3R_26077306_SNP [dm3] 3R_30251584_SNP [dm6] | A | G | 2.321e-5 | 0.781 |
DOWNSTREAM
CG34299 INTRON CG9682 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA
|
|
3L | 22839638 | 3L_22839638_SNP [dm3] 3L_22846538_SNP [dm6] | G | C | 2.338e-5 | 0.781 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 11900713 | 3R_11900713_SNP [dm3] 3R_16074991_SNP [dm6] | A | T | 2.351e-5 | 0.781 |
SYNONYMOUS_CODING
Mhcl INTRON Mhcl |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2L | 5462385 | 2L_5462385_INS [dm3] 2L_5462385_INS [dm6] | T | TCTCGT | 2.372e-5 | 0.781 |
INTRON
mid |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_z
|
|
X | 5483492 | X_5483492_SNP [dm3] X_5589459_SNP [dm6] | G | A | 2.447e-5 | 0.781 |
INTERGENIC
|
TF binding site
mE1_TFBS_inv
|
|
X | 12336269 | X_12336269_SNP [dm3] X_12442236_SNP [dm6] | A | G | 2.579e-5 | 0.781 |
INTRON
Pkcdelta |
||
3L | 10138347 | 3L_10138347_SNP [dm3] 3L_10145247_SNP [dm6] | C | T | 2.693e-5 | 0.781 |
INTERGENIC
|
||
X | 14746178 | X_14746178_SNP [dm3] X_14852145_SNP [dm6] | A | C | 2.729e-5 | 0.781 |
SYNONYMOUS_CODING
CG9521 INTRON Flo2 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 19204995 | 3R_19204995_SNP [dm3] 3R_23379273_SNP [dm6] | A | G | 2.819e-5 | 0.781 |
SYNONYMOUS_CODING
CG4393 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 11925572 | 3L_11925572_SNP [dm3] 3L_11932472_SNP [dm6] | T | G | 2.825e-5 | 0.781 |
INTRON
CG44837 & 1 other |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3L | 18083332 | 3L_18083332_SNP [dm3] 3L_18090232_SNP [dm6] | T | G | 2.842e-5 | 0.781 |
INTRON
CG13698 |
||
3R | 26077305 | 3R_26077305_SNP [dm3] 3R_30251583_SNP [dm6] | A | T | 2.865e-5 | 0.781 |
DOWNSTREAM
CG34299 INTRON CG9682 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA
|
|
2L | 19295258 | 2L_19295258_SNP [dm3] 2L_19295258_SNP [dm6] | A | G | 3.084e-5 | 0.781 |
INTERGENIC
|
||
3L | 4064248 | 3L_4064248_SNP [dm3] 3L_4064248_SNP [dm6] | A | T | 3.201e-5 | 0.781 |
UTR_3_PRIME
dib & 1 other |
TF binding site
mE1_TFBS_cad
|
|
X | 6828122 | X_6828122_SNP [dm3] X_6934089_SNP [dm6] | C | G | 3.259e-5 | 0.781 |
INTRON
CG14431 |
||
3R | 18700052 | 3R_18700052_SNP [dm3] 3R_22874330_SNP [dm6] | G | C | 3.278e-5 | 0.781 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
X | 2908522 | X_2908522_SNP [dm3] X_3014489_SNP [dm6] | G | A | 3.278e-5 | 0.781 |
INTRON
kirre |
||
3R | 6711687 | 3R_6711687_SNP [dm3] 3R_10885965_SNP [dm6] | C | T | 3.387e-5 | 0.781 |
UTR_5_PRIME
Leash UPSTREAM CG14696 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
|
|
2R | 8177294 | 2R_8177294_SNP [dm3] 2R_12289789_SNP [dm6] | T | C | 3.415e-5 | 0.781 |
UPSTREAM
CG42700 INTRON CG42700 |
||
2R | 8177295 | 2R_8177295_SNP [dm3] 2R_12289790_SNP [dm6] | T | C | 3.415e-5 | 0.781 |
UPSTREAM
CG42700 INTRON CG42700 |
||
2L | 1617410 | 2L_1617410_DEL [dm3] 2L_1617410_DEL [dm6] | AA | A | 3.500e-5 | 0.781 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_chinmo
|
|
X | 12336250 | X_12336250_SNP [dm3] X_12442217_SNP [dm6] | A | C | 3.595e-5 | 0.781 |
INTRON
Pkcdelta |
||
3R | 15334321 | 3R_15334321_SNP [dm3] 3R_19508599_SNP [dm6] | G | T | 3.715e-5 | 0.781 |
UPSTREAM
Dys INTRON Dys |
TF binding site
mE1_TFBS_Trl
|
|
3R | 20377587 | 3R_20377587_SNP [dm3] 3R_24551865_SNP [dm6] | T | C | 3.831e-5 | 0.781 |
INTRON
Esyt2 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 19655670 | 3R_19655670_SNP [dm3] 3R_23829948_SNP [dm6] | C | T | 3.832e-5 | 0.781 |
INTRON
CG34355 |
||
2L | 8503577 | 2L_8503577_SNP [dm3] 2L_8503577_SNP [dm6] | C | T | 3.871e-5 | 0.781 |
INTRON
Dh31 |
||
X | 9095176 | X_9095176_SNP [dm3] X_9201143_SNP [dm6] | C | T | 3.886e-5 | 0.781 |
INTRON
su_r_ |
||
3L | 11388971 | 3L_11388971_INS [dm3] 3L_11395871_INS [dm6] | A | AT | 3.935e-5 | 0.781 |
DOWNSTREAM
CG11726 INTERGENIC |
||
X | 14747963 | X_14747963_SNP [dm3] X_14853930_SNP [dm6] | A | T | 4.060e-5 | 0.781 |
UPSTREAM
CG9521 DOWNSTREAM CG9519 INTRON Flo2 |
||
3L | 22844112 | 3L_22844112_SNP [dm3] 3L_22851012_SNP [dm6] | C | T | 4.105e-5 | 0.781 |
INTRON
CR43426 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
|
|
3R | 6721222 | 3R_6721222_SNP [dm3] 3R_10895500_SNP [dm6] | C | A | 4.140e-5 | 0.781 |
UTR_3_PRIME
Leash DOWNSTREAM CR45577 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_run
|
|
3R | 6721449 | 3R_6721449_SNP [dm3] 3R_10895727_SNP [dm6] | A | T | 4.140e-5 | 0.781 |
UTR_3_PRIME
Leash DOWNSTREAM CR45577 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_run
|
|
3L | 18029073 | 3L_18029073_SNP [dm3] 3L_18035973_SNP [dm6] | G | A | 4.171e-5 | 0.781 |
INTRON
Eip75B |
||
X | 3003793 | X_3003793_SNP [dm3] X_3109760_SNP [dm6] | C | T | 4.202e-5 | 0.781 |
INTRON
kirre |
||
2L | 19295226 | 2L_19295226_SNP [dm3] 2L_19295226_SNP [dm6] | C | T | 4.214e-5 | 0.781 |
INTERGENIC
|
||
X | 12336300 | X_12336300_SNP [dm3] X_12442267_SNP [dm6] | A | T | 4.228e-5 | 0.781 |
INTRON
Pkcdelta |
||
2R | 17297680 | 2R_17297680_SNP [dm3] 2R_21410175_SNP [dm6] | A | C | 4.252e-5 | 0.781 |
INTRON
Sdc |
||
3R | 16355299 | 3R_16355299_SNP [dm3] 3R_20529577_SNP [dm6] | A | T | 4.263e-5 | 0.781 |
INTERGENIC
|
||
3L | 11925809 | 3L_11925809_SNP [dm3] 3L_11932709_SNP [dm6] | A | G | 4.291e-5 | 0.781 |
INTRON
CG44837 & 1 other |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 7266275 | 2R_7266275_SNP [dm3] 2R_11378770_SNP [dm6] | T | G | 4.322e-5 | 0.781 |
INTRON
Tsp47F |
||
2R | 10529806 | 2R_10529806_SNP [dm3] 2R_14642301_SNP [dm6] | T | C | 4.374e-5 | 0.781 |
INTERGENIC
|
||
3R | 6725942 | 3R_6725942_SNP [dm3] 3R_10900220_SNP [dm6] | A | T | 4.422e-5 | 0.781 |
INTERGENIC
|
||
X | 12336260 | X_12336260_SNP [dm3] X_12442227_SNP [dm6] | A | C | 4.603e-5 | 0.781 |
INTRON
Pkcdelta |
||
X | 14746220 | X_14746220_SNP [dm3] X_14852187_SNP [dm6] | C | G | 4.721e-5 | 0.781 |
SYNONYMOUS_CODING
CG9521 INTRON Flo2 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
X | 14746250 | X_14746250_SNP [dm3] X_14852217_SNP [dm6] | T | C | 4.721e-5 | 0.781 |
SYNONYMOUS_CODING
CG9521 INTRON Flo2 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 17926749 | 2R_17926749_SNP [dm3] 2R_22039244_SNP [dm6] | A | G | 4.797e-5 | 0.781 |
INTRON
CG34370 |
||
2R | 8185395 | 2R_8185395_SNP [dm3] 2R_12297890_SNP [dm6] | A | C | 4.925e-5 | 0.781 |
UTR_3_PRIME
CG42700 UPSTREAM CR45271 DOWNSTREAM CG8850 |
||
2R | 6621696 | 2R_6621696_SNP [dm3] 2R_10734191_SNP [dm6] | A | G | 5.179e-5 | 0.781 |
INTRON
CG7220 |
||
3R | 6724270 | 3R_6724270_SNP [dm3] 3R_10898548_SNP [dm6] | C | A | 5.186e-5 | 0.781 |
EXON
CR45578 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
X | 2565606 | X_2565606_SNP [dm3] X_2671573_SNP [dm6] | T | C | 5.374e-5 | 0.781 |
INTRON
sgg |
||
2R | 14170739 | 2R_14170739_SNP [dm3] 2R_18283234_SNP [dm6] | A | G | 5.517e-5 | 0.781 |
SYNONYMOUS_CODING
sbb |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2R | 14170753 | 2R_14170753_SNP [dm3] 2R_18283248_SNP [dm6] | A | C | 5.517e-5 | 0.781 |
SPLICE_SITE_REGION
sbb INTRON sbb |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
3R | 6723020 | 3R_6723020_SNP [dm3] 3R_10897298_SNP [dm6] | T | G | 5.561e-5 | 0.781 |
UPSTREAM
CR45577 DOWNSTREAM Leash & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_sna
|
|
3R | 6723042 | 3R_6723042_SNP [dm3] 3R_10897320_SNP [dm6] | T | G | 5.561e-5 | 0.781 |
UPSTREAM
CR45577 DOWNSTREAM Leash & 1 other INTERGENIC |
||
3R | 6723062 | 3R_6723062_SNP [dm3] 3R_10897340_SNP [dm6] | A | T | 5.561e-5 | 0.781 |
UPSTREAM
CR45577 DOWNSTREAM Leash & 1 other INTERGENIC |
||
3R | 6723105 | 3R_6723105_SNP [dm3] 3R_10897383_SNP [dm6] | G | A | 5.561e-5 | 0.781 |
UPSTREAM
CR45577 DOWNSTREAM Leash & 1 other INTERGENIC |
||
3R | 6723117 | 3R_6723117_SNP [dm3] 3R_10897395_SNP [dm6] | C | A | 5.561e-5 | 0.781 |
UPSTREAM
CR45577 DOWNSTREAM Leash & 1 other INTERGENIC |
||
3R | 6723422 | 3R_6723422_SNP [dm3] 3R_10897700_SNP [dm6] | G | C | 5.561e-5 | 0.781 |
UPSTREAM
CR45577 DOWNSTREAM CR45578 INTERGENIC |
||
3R | 6725863 | 3R_6725863_SNP [dm3] 3R_10900141_SNP [dm6] | A | T | 5.561e-5 | 0.781 |
INTERGENIC
|
||
3R | 6728775 | 3R_6728775_SNP [dm3] 3R_10903053_SNP [dm6] | C | T | 5.561e-5 | 0.781 |
INTERGENIC
|
||
3R | 6734973 | 3R_6734973_SNP [dm3] 3R_10909251_SNP [dm6] | G | A | 5.561e-5 | 0.781 |
INTERGENIC
|
||
3R | 6735382 | 3R_6735382_SNP [dm3] 3R_10909660_SNP [dm6] | C | A | 5.561e-5 | 0.781 |
INTERGENIC
|
||
3L | 22847103 | 3L_22847103_SNP [dm3] 3L_22854003_SNP [dm6] | A | C | 5.659e-5 | 0.781 |
UPSTREAM
CG32462 DOWNSTREAM CG32459 & 1 other EXON CR43426 |
||
2R | 4071675 | 2R_4071675_SNP [dm3] 2R_8184170_SNP [dm6] | G | A | 5.718e-5 | 0.781 |
INTRON
LRP1 |