©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
3L | 12619896 | 3L_12619896_SNP [dm3] 3L_12626796_SNP [dm6] | C | T | 1.816e-7 | 0.341 |
INTERGENIC
|
||
3R | 13938753 | 3R_13938753_SNP [dm3] 3R_18113031_SNP [dm6] | G | A | 6.376e-7 | 0.598 |
INTRON
sr |
||
2R | 9007133 | 2R_9007133_SNP [dm3] 2R_13119628_SNP [dm6] | A | G | 1.747e-6 | 0.837 |
INTRON
CG13325 |
||
2L | 7816783 | 2L_7816783_SNP [dm3] 2L_7816783_SNP [dm6] | T | A | 2.114e-6 | 0.837 |
SYNONYMOUS_CODING
LanB1 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 16931850 | 3R_16931850_SNP [dm3] 3R_21106128_SNP [dm6] | C | T | 2.232e-6 | 0.837 |
SYNONYMOUS_CODING
Sec15 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
|
|
3R | 13938851 | 3R_13938851_SNP [dm3] 3R_18113129_SNP [dm6] | G | C | 3.998e-6 | 0.865 |
INTRON
sr |
||
3R | 21396404 | 3R_21396404_SNP [dm3] 3R_25570682_SNP [dm6] | C | G | 4.155e-6 | 0.865 |
INTRON
msi |
||
3R | 16509727 | 3R_16509727_DEL [dm3] 3R_20684005_DEL [dm6] | GATGTATACCTAC... | G | 4.796e-6 | 0.865 |
INTERGENIC
|
||
3R | 16509740 | 3R_16509740_INS [dm3] 3R_20684018_INS [dm6] | T | TCGCC | 5.275e-6 | 0.865 |
INTERGENIC
|
||
3L | 1491853 | 3L_1491853_SNP [dm3] 3L_1491853_SNP [dm6] | T | C | 5.278e-6 | 0.865 |
SYNONYMOUS_CODING
CG12084 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad
|
|
3L | 18941448 | 3L_18941448_DEL [dm3] 3L_18948348_DEL [dm6] | ACGTGA | A | 5.460e-6 | 0.865 |
INTERGENIC
|
||
3R | 21385631 | 3R_21385631_SNP [dm3] 3R_25559909_SNP [dm6] | G | C | 5.531e-6 | 0.865 |
INTRON
msi |
||
3L | 10214349 | 3L_10214349_SNP [dm3] 3L_10221249_SNP [dm6] | G | A | 6.143e-6 | 0.886 |
INTRON
scramb1 |
TF binding site
mE1_TFBS_cad
|
|
2R | 15323078 | 2R_15323078_SNP [dm3] 2R_19435573_SNP [dm6] | T | G | 7.581e-6 | 0.896 |
INTRON
Fak |
||
2L | 6132117 | 2L_6132117_SNP [dm3] 2L_6132117_SNP [dm6] | C | G | 8.031e-6 | 0.896 |
SYNONYMOUS_CODING
CG9222 |
||
3L | 1487330 | 3L_1487330_SNP [dm3] 3L_1487330_SNP [dm6] | T | G | 9.887e-6 | 0.896 |
INTRON
stet |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3R | 16932511 | 3R_16932511_SNP [dm3] 3R_21106789_SNP [dm6] | T | C | 1.142e-5 | 0.896 |
SYNONYMOUS_CODING
Sec15 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 8144884 | 2R_8144884_SNP [dm3] 2R_12257379_SNP [dm6] | A | G | 1.180e-5 | 0.896 |
NON_SYNONYMOUS_CODING
Vha36-2 |
TF binding site
mE1_TFBS_cad
|
|
2L | 14618488 | 2L_14618488_SNP [dm3] 2L_14618488_SNP [dm6] | G | A | 1.326e-5 | 0.896 |
INTRON
osp & 2 others |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 10550604 | 3L_10550604_SNP [dm3] 3L_10557504_SNP [dm6] | C | T | 1.335e-5 | 0.896 |
UTR_3_PRIME
CG6527 DOWNSTREAM CG6527 INTRON A2bp1 |
||
3L | 1487360 | 3L_1487360_SNP [dm3] 3L_1487360_SNP [dm6] | A | G | 1.407e-5 | 0.896 |
INTRON
stet |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 14832600 | 3L_14832600_SNP [dm3] 3L_14839500_SNP [dm6] | T | C | 1.500e-5 | 0.896 |
INTRON
CG17839 |
||
3L | 1487399 | 3L_1487399_SNP [dm3] 3L_1487399_SNP [dm6] | T | A | 1.573e-5 | 0.896 |
INTRON
stet |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 14296716 | 3L_14296716_SNP [dm3] 3L_14303616_SNP [dm6] | T | A | 1.577e-5 | 0.896 |
INTRON
fz |
||
3L | 4137240 | 3L_4137240_SNP [dm3] 3L_4137240_SNP [dm6] | G | T | 1.720e-5 | 0.896 |
SYNONYMOUS_CODING
Rop |
TF binding site
mE1_TFBS_cad
|
|
3R | 11351068 | 3R_11351068_SNP [dm3] 3R_15525346_SNP [dm6] | T | C | 1.739e-5 | 0.896 |
INTERGENIC
|
||
2L | 14618486 | 2L_14618486_SNP [dm3] 2L_14618486_SNP [dm6] | A | C | 1.829e-5 | 0.896 |
INTRON
osp & 2 others |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 1491811 | 3L_1491811_SNP [dm3] 3L_1491811_SNP [dm6] | A | G | 1.852e-5 | 0.896 |
SYNONYMOUS_CODING
CG12084 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad
|
|
X | 4232116 | X_4232116_SNP [dm3] X_4338083_SNP [dm6] | G | C | 1.865e-5 | 0.896 |
INTRON
norpA |
TF binding site
mE1_TFBS_inv
|
|
3L | 17394270 | 3L_17394270_INS [dm3] 3L_17401170_INS [dm6] | G | GTG | 1.902e-5 | 0.896 |
FRAME_SHIFT
noe INTRON blot |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 14072180 | 2R_14072180_SNP [dm3] 2R_18184675_SNP [dm6] | A | C | 1.903e-5 | 0.896 |
UTR_3_PRIME
CG33958 UPSTREAM CG5721 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 19098332 | 2R_19098332_SNP [dm3] 2R_23210809_SNP [dm6] | G | T | 1.931e-5 | 0.896 |
SYNONYMOUS_CODING
LS2 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 16134041 | 3L_16134041_SNP [dm3] 3L_16140941_SNP [dm6] | A | T | 1.939e-5 | 0.896 |
SYNONYMOUS_CODING
CG5151 UTR_3_PRIME CG32152 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2R | 8695055 | 2R_8695055_SNP [dm3] 2R_12807550_SNP [dm6] | T | C | 1.944e-5 | 0.896 |
UTR_3_PRIME
CG17580 |
||
2R | 16479327 | 2R_16479327_SNP [dm3] 2R_20591822_SNP [dm6] | G | A | 1.964e-5 | 0.896 |
INTRON
bl |
TF binding site
BDTNP1_TFBS_dl
|
|
3R | 25593455 | 3R_25593455_SNP [dm3] 3R_29767733_SNP [dm6] | T | C | 1.976e-5 | 0.896 |
INTRON
kay |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_chinmo
|
|
3R | 16032725 | 3R_16032725_SNP [dm3] 3R_20207003_SNP [dm6] | T | C | 1.985e-5 | 0.896 |
INTRON
Nlg4 |
||
X | 6786599 | X_6786599_SNP [dm3] X_6892566_SNP [dm6] | C | A | 2.047e-5 | 0.896 |
INTERGENIC
|
||
3L | 13749102 | 3L_13749102_SNP [dm3] 3L_13756002_SNP [dm6] | C | A | 2.163e-5 | 0.896 |
INTRON
bru-3 |
||
3R | 8910710 | 3R_8910710_SNP [dm3] 3R_13084988_SNP [dm6] | T | G | 2.187e-5 | 0.896 |
UPSTREAM
CR44967 INTERGENIC |
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
3R | 8936884 | 3R_8936884_DEL [dm3] 3R_13111162_DEL [dm6] | AATCTTT | A | 2.257e-5 | 0.896 |
INTRON
timeout |
||
2R | 14809602 | 2R_14809602_SNP [dm3] 2R_18922097_SNP [dm6] | A | C | 2.319e-5 | 0.896 |
INTRON
sano |
||
3L | 1487129 | 3L_1487129_SNP [dm3] 3L_1487129_SNP [dm6] | T | C | 2.320e-5 | 0.896 |
INTRON
stet |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
|
|
2L | 14618519 | 2L_14618519_SNP [dm3] 2L_14618519_SNP [dm6] | G | C | 2.401e-5 | 0.896 |
INTRON
osp & 2 others |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 19673603 | 2R_19673603_SNP [dm3] 2R_23786080_SNP [dm6] | G | C | 2.624e-5 | 0.896 |
NON_SYNONYMOUS_CODING
CG9850 |
||
3R | 13932721 | 3R_13932721_DEL [dm3] 3R_18106999_DEL [dm6] | TTGATGT | T | 2.648e-5 | 0.896 |
INTRON
sr |
||
2R | 15323061 | 2R_15323061_SNP [dm3] 2R_19435556_SNP [dm6] | T | G | 2.667e-5 | 0.896 |
SPLICE_SITE_REGION
Fak INTRON Fak |
||
X | 19759438 | X_19759438_SNP [dm3] X_19865405_SNP [dm6] | C | T | 2.759e-5 | 0.896 |
SYNONYMOUS_CODING
CG15618 UPSTREAM Hers |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h
|
|
3R | 9535232 | 3R_9535232_SNP [dm3] 3R_13709510_SNP [dm6] | T | G | 2.766e-5 | 0.896 |
SYNONYMOUS_CODING
CG31469 DOWNSTREAM primo-2 & 2 others |
||
X | 16736564 | X_16736564_SNP [dm3] X_16842531_SNP [dm6] | C | T | 2.820e-5 | 0.896 |
INTRON
RSG7 |
TF binding site
mE1_TFBS_HSA
|
|
3R | 26527426 | 3R_26527426_SNP [dm3] 3R_30701704_SNP [dm6] | G | C | 2.832e-5 | 0.896 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_inv
|
|
X | 8706545 | X_8706545_SNP [dm3] X_8812512_SNP [dm6] | G | A | 2.865e-5 | 0.896 |
INTERGENIC
|
||
3R | 13932708 | 3R_13932708_INS [dm3] 3R_18106986_INS [dm6] | T | TT | 2.865e-5 | 0.896 |
INTRON
sr |
||
3L | 13173598 | 3L_13173598_SNP [dm3] 3L_13180498_SNP [dm6] | C | G | 2.921e-5 | 0.896 |
INTERGENIC
|
||
X | 3418787 | X_3418787_SNP [dm3] X_3524754_SNP [dm6] | C | G | 2.939e-5 | 0.896 |
INTRON
CG32791 |
||
3R | 13932740 | 3R_13932740_SNP [dm3] 3R_18107018_SNP [dm6] | T | A | 2.960e-5 | 0.896 |
INTRON
sr |
||
X | 8706543 | X_8706543_SNP [dm3] X_8812510_SNP [dm6] | A | T | 3.008e-5 | 0.896 |
INTERGENIC
|
||
3R | 15179669 | 3R_15179669_SNP [dm3] 3R_19353947_SNP [dm6] | T | G | 3.109e-5 | 0.896 |
UPSTREAM
CG43203 INTERGENIC |
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_Kr
|
|
3R | 8910682 | 3R_8910682_SNP [dm3] 3R_13084960_SNP [dm6] | C | T | 3.114e-5 | 0.896 |
UPSTREAM
CR44967 INTERGENIC |
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
3L | 12306040 | 3L_12306040_INS [dm3] 3L_12312940_INS [dm6] | T | TAAGGCT | 3.153e-5 | 0.896 |
DOWNSTREAM
CG44355 INTERGENIC |
||
3R | 14302306 | 3R_14302306_SNP [dm3] 3R_18476584_SNP [dm6] | A | C | 3.196e-5 | 0.896 |
INTRON
fru |
||
2R | 7068803 | 2R_7068803_SNP [dm3] 2R_11181298_SNP [dm6] | A | G | 3.202e-5 | 0.896 |
INTRON
shn |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med
|
|
2R | 14154104 | 2R_14154104_SNP [dm3] 2R_18266599_SNP [dm6] | C | A | 3.206e-5 | 0.896 |
INTERGENIC
|
||
X | 8706283 | X_8706283_DEL [dm3] X_8812250_DEL [dm6] | AAATAAAATGCAAATCCCAT... | T | 3.231e-5 | 0.896 |
INTERGENIC
|
||
3R | 13932732 | 3R_13932732_SNP [dm3] 3R_18107010_SNP [dm6] | C | A | 3.300e-5 | 0.896 |
INTRON
sr |
||
3R | 16032616 | 3R_16032616_SNP [dm3] 3R_20206894_SNP [dm6] | A | G | 3.301e-5 | 0.896 |
INTRON
Nlg4 |
TF binding site
mE1_TFBS_HSA
|
|
3L | 1487346 | 3L_1487346_SNP [dm3] 3L_1487346_SNP [dm6] | G | A | 3.399e-5 | 0.896 |
INTRON
stet |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
|
|
2L | 11029888 | 2L_11029888_SNP [dm3] 2L_11029888_SNP [dm6] | T | C | 3.422e-5 | 0.896 |
INTRON
Samuel |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3L | 13173586 | 3L_13173586_SNP [dm3] 3L_13180486_SNP [dm6] | C | T | 3.427e-5 | 0.896 |
INTERGENIC
|
||
3L | 15167812 | 3L_15167812_SNP [dm3] 3L_15174712_SNP [dm6] | A | T | 3.455e-5 | 0.896 |
INTERGENIC
|
||
2L | 1699738 | 2L_1699738_SNP [dm3] 2L_1699738_SNP [dm6] | A | C | 3.561e-5 | 0.896 |
UTR_3_PRIME
chinmo |
||
X | 4776341 | X_4776341_SNP [dm3] X_4882308_SNP [dm6] | G | T | 3.628e-5 | 0.896 |
INTRON
CG42594 |
||
3L | 10486666 | 3L_10486666_SNP [dm3] 3L_10493566_SNP [dm6] | C | G | 3.693e-5 | 0.896 |
DOWNSTREAM
S-Lap4 INTRON A2bp1 |
||
3R | 26457095 | 3R_26457095_SNP [dm3] 3R_30631373_SNP [dm6] | A | C | 3.761e-5 | 0.896 |
INTERGENIC
|
TF binding site
mE1_TFBS_cad
|
|
X | 5940404 | X_5940404_SNP [dm3] X_6046371_SNP [dm6] | C | T | 3.767e-5 | 0.896 |
SYNONYMOUS_CODING
CG5937 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 13932695 | 3R_13932695_SNP [dm3] 3R_18106973_SNP [dm6] | T | G | 3.808e-5 | 0.896 |
INTRON
sr |
||
2L | 9403244 | 2L_9403244_SNP [dm3] 2L_9403244_SNP [dm6] | C | T | 3.873e-5 | 0.896 |
INTRON
Shawl |
||
2L | 15345553 | 2L_15345553_SNP [dm3] 2L_15345553_SNP [dm6] | G | C | 3.898e-5 | 0.896 |
INTERGENIC
|
||
2R | 970335 | 2R_970335_SNP [dm3] 2R_5082830_SNP [dm6] | C | G | 4.022e-5 | 0.896 |
UPSTREAM
CR43360 INTERGENIC |
TF binding site
mE1_TFBS_cad
|
|
3L | 20137488 | 3L_20137488_INS [dm3] 3L_20144388_INS [dm6] | T | TACGCAT | 4.050e-5 | 0.896 |
INTERGENIC
|
||
3L | 4728801 | 3L_4728801_SNP [dm3] 3L_4728801_SNP [dm6] | A | G | 4.159e-5 | 0.896 |
INTRON
RhoGEF64C |
||
3L | 7868454 | 3L_7868454_SNP [dm3] 3L_7875354_SNP [dm6] | C | A | 4.223e-5 | 0.896 |
INTRON
CG32365 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
|
|
3R | 20727551 | 3R_20727551_SNP [dm3] 3R_24901829_SNP [dm6] | C | T | 4.247e-5 | 0.896 |
SYNONYMOUS_CODING
CG10845 INTRON CG13643 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3R | 14879030 | 3R_14879030_INS [dm3] 3R_19053308_INS [dm6] | T | TT | 4.401e-5 | 0.896 |
INTRON
cdi |
||
3L | 4992385 | 3L_4992385_SNP [dm3] 3L_4992385_SNP [dm6] | C | A | 4.433e-5 | 0.896 |
INTRON
Con |
TF binding site
BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
|
|
3R | 26457096 | 3R_26457096_SNP [dm3] 3R_30631374_SNP [dm6] | A | C | 4.550e-5 | 0.896 |
INTERGENIC
|
TF binding site
mE1_TFBS_cad
|
|
2R | 12669883 | 2R_12669883_SNP [dm3] 2R_16782378_SNP [dm6] | A | T | 4.550e-5 | 0.896 |
SYNONYMOUS_CODING
resilin |
TF binding site
BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3L | 14026871 | 3L_14026871_SNP [dm3] 3L_14033771_SNP [dm6] | T | G | 4.565e-5 | 0.896 |
SYNONYMOUS_CODING
CG6650 DOWNSTREAM pncr014:3L |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
3R | 18101867 | 3R_18101867_SNP [dm3] 3R_22276145_SNP [dm6] | C | T | 4.568e-5 | 0.896 |
INTRON
SKIP |
||
2L | 12184287 | 2L_12184287_SNP [dm3] 2L_12184287_SNP [dm6] | C | T | 4.632e-5 | 0.896 |
INTRON
aret |
||
3R | 15105031 | 3R_15105031_SNP [dm3] 3R_19279309_SNP [dm6] | C | A | 4.647e-5 | 0.896 |
INTRON
CR44173 |
||
X | 3724037 | X_3724037_SNP [dm3] X_3830004_SNP [dm6] | C | T | 4.653e-5 | 0.896 |
SYNONYMOUS_CODING
CG2901 INTRON ec |
TF binding site
mE1_TFBS_sens
|
|
3L | 2246408 | 3L_2246408_SNP [dm3] 3L_2246408_SNP [dm6] | A | T | 4.666e-5 | 0.896 |
SYNONYMOUS_CODING
CG32301 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 11350868 | 3R_11350868_DEL [dm3] 3R_15525146_DEL [dm6] | AA | A | 4.667e-5 | 0.896 |
INTERGENIC
|
||
2L | 13267623 | 2L_13267623_SNP [dm3] 2L_13267623_SNP [dm6] | C | T | 4.719e-5 | 0.896 |
UTR_5_PRIME
CG44085 INTRON CG44085 |
||
X | 10223223 | X_10223223_SNP [dm3] X_10329190_SNP [dm6] | A | C | 4.836e-5 | 0.896 |
SYNONYMOUS_CODING
Gip DOWNSTREAM CG2909 & 1 other |
TF binding site
mE1_TFBS_HSA
|
|
2R | 10517633 | 2R_10517633_SNP [dm3] 2R_14630128_SNP [dm6] | G | T | 4.851e-5 | 0.896 |
NON_SYNONYMOUS_CODING
CG10131 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2L | 7480660 | 2L_7480660_SNP [dm3] 2L_7480660_SNP [dm6] | A | T | 4.864e-5 | 0.896 |
SYNONYMOUS_CODING
Ziz |
||
2R | 10517992 | 2R_10517992_SNP [dm3] 2R_14630487_SNP [dm6] | G | A | 5.056e-5 | 0.896 |
NON_SYNONYMOUS_CODING
CG10131 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
3R | 15179663 | 3R_15179663_SNP [dm3] 3R_19353941_SNP [dm6] | A | T | 5.227e-5 | 0.896 |
UPSTREAM
CG43203 INTERGENIC |
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_Kr
|