DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=3.632e^-2)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2121 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	5505206	3L_5505206_SNP [dm3] 3L_5512106_SNP [dm6]	A	G	1.674e^-7	0.314	DOWNSTREAM Lkr INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_GATAe mE1_TFBS_HSA
3R	15288909	3R_15288909_SNP [dm3] 3R_19463187_SNP [dm6]	A	G	9.813e^-7	0.513	UPSTREAM Dys & 1 other INTRON Dys	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_Kr mE1_TFBS_Trl
X	18534233	X_18534233_SNP [dm3] X_18640200_SNP [dm6]	A	G	1.064e^-6	0.513	SPLICE_SITE_REGION Rip11 INTRON Rip11	TF binding site BDTNP1_TFBS_ftz BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	5158751	3L_5158751_SNP [dm3] 3L_5165651_SNP [dm6]	T	A	1.094e^-6	0.513	INTRON shep
3R	12289893	3R_12289893_SNP [dm3] 3R_16464171_SNP [dm6]	T	A	2.424e^-6	0.825	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
3L	5503669	3L_5503669_SNP [dm3] 3L_5510569_SNP [dm6]	T	C	2.672e^-6	0.825	INTRON CG34342
3R	20727551	3R_20727551_SNP [dm3] 3R_24901829_SNP [dm6]	C	T	3.891e^-6	0.825	SYNONYMOUS_CODING CG10845 INTRON CG13643	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	10031191	3L_10031191_DEL [dm3] 3L_10038091_DEL [dm6]	CA	C	4.094e^-6	0.825	INTRON dpr6
2L	1788747	2L_1788747_SNP [dm3] 2L_1788747_SNP [dm6]	A	C	4.740e^-6	0.825	DOWNSTREAM Gr22d INTERGENIC
2L	1788734	2L_1788734_SNP [dm3] 2L_1788734_SNP [dm6]	C	A	4.759e^-6	0.825	DOWNSTREAM Gr22d INTERGENIC
2L	1788739	2L_1788739_INS [dm3] 2L_1788739_INS [dm6]	T	TT	5.070e^-6	0.825	DOWNSTREAM Gr22d INTERGENIC
3L	1487330	3L_1487330_SNP [dm3] 3L_1487330_SNP [dm6]	T	G	6.458e^-6	0.825	INTRON stet	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
3L	16130048	3L_16130048_SNP [dm3] 3L_16136948_SNP [dm6]	C	T	6.494e^-6	0.825	SYNONYMOUS_CODING CG5157 DOWNSTREAM CG16838 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	1699738	2L_1699738_SNP [dm3] 2L_1699738_SNP [dm6]	A	C	6.642e^-6	0.825	UTR_3_PRIME chinmo
2L	1699735	2L_1699735_SNP [dm3] 2L_1699735_SNP [dm6]	C	A	6.651e^-6	0.825	UTR_3_PRIME chinmo
2R	9007133	2R_9007133_SNP [dm3] 2R_13119628_SNP [dm6]	A	G	7.233e^-6	0.825	INTRON CG13325
2L	1788750	2L_1788750_SNP [dm3] 2L_1788750_SNP [dm6]	C	T	7.575e^-6	0.825	DOWNSTREAM Gr22d INTERGENIC
3L	5503742	3L_5503742_SNP [dm3] 3L_5510642_SNP [dm6]	G	T	7.946e^-6	0.825	INTRON CG34342
2L	11149818	2L_11149818_SNP [dm3] 2L_11149818_SNP [dm6]	A	T	8.352e^-6	0.825	UPSTREAM Gyc32E INTERGENIC	TF binding site BDTNP1_TFBS_prd
3L	16128605	3L_16128605_SNP [dm3] 3L_16135505_SNP [dm6]	T	G	9.989e^-6	0.835	SYNONYMOUS_CODING CG16838 DOWNSTREAM CG5157
X	12666551	X_12666551_SNP [dm3] X_12772518_SNP [dm6]	A	C	1.066e^-5	0.835	UTR_3_PRIME CG3812 & 1 other
3R	9840450	3R_9840450_SNP [dm3] 3R_14014728_SNP [dm6]	A	C	1.084e^-5	0.835	INTRON rdx	TF binding site BDTNP1_TFBS_dl
X	5324047	X_5324047_SNP [dm3] X_5430014_SNP [dm6]	C	T	1.136e^-5	0.835	UTR_5_PRIME CG15784 UPSTREAM CG15784 DOWNSTREAM CR45517
2L	5445819	2L_5445819_SNP [dm3] 2L_5445819_SNP [dm6]	G	C	1.160e^-5	0.835	INTERGENIC
X	5324045	X_5324045_SNP [dm3] X_5430012_SNP [dm6]	A	T	1.166e^-5	0.835	START_GAINED CG15784 UTR_5_PRIME CG15784 UPSTREAM CG15784 DOWNSTREAM CR45517
3L	3530703	3L_3530703_SNP [dm3] 3L_3530703_SNP [dm6]	T	C	1.210e^-5	0.835	INTRON Eip63E
3L	12381139	3L_12381139_SNP [dm3] 3L_12388039_SNP [dm6]	A	C	1.246e^-5	0.835	UPSTREAM Ncc69 INTRON Ncc69
3L	12381141	3L_12381141_DEL [dm3] 3L_12388041_DEL [dm6]	AAT	C	1.246e^-5	0.835	UPSTREAM Ncc69 INTRON Ncc69
X	7450403	X_7450403_SNP [dm3] X_7556370_SNP [dm6]	A	T	1.352e^-5	0.861	EXON CR44501	TF binding site BDTNP1_TFBS_da mE1_TFBS_GATAe mE1_TFBS_HSA
2L	8307939	2L_8307939_SNP [dm3] 2L_8307939_SNP [dm6]	G	A	1.377e^-5	0.861	UPSTREAM CG7818 INTRON Ostgamma	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3L	10188818	3L_10188818_SNP [dm3] 3L_10195718_SNP [dm6]	T	A	1.475e^-5	0.863	INTRON ect
X	5296638	X_5296638_INS [dm3] X_5402605_INS [dm6]	A	ATCAGAACAGA...	1.523e^-5	0.863	UTR_3_PRIME SK INTRON SK
2L	17445031	2L_17445031_SNP [dm3] 2L_17445031_SNP [dm6]	C	G	1.594e^-5	0.863	INTRON dl
2L	16836590	2L_16836590_SNP [dm3] 2L_16836590_SNP [dm6]	T	A	1.725e^-5	0.863	NON_SYNONYMOUS_CODING CG13283	TF binding site mE1_TFBS_sens
2R	9119984	2R_9119984_SNP [dm3] 2R_13232479_SNP [dm6]	C	T	1.761e^-5	0.863	SYNONYMOUS_CODING CG4670 DOWNSTREAM fsd	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
X	6643090	X_6643090_INS [dm3] X_6749057_INS [dm6]	A	ACA	1.776e^-5	0.863	INTRON CG14439
3L	1487360	3L_1487360_SNP [dm3] 3L_1487360_SNP [dm6]	A	G	1.943e^-5	0.863	INTRON stet	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
2R	4674221	2R_4674221_SNP [dm3] 2R_8786716_SNP [dm6]	C	T	1.977e^-5	0.863	INTERGENIC
3R	12290125	3R_12290125_SNP [dm3] 3R_16464403_SNP [dm6]	C	G	2.011e^-5	0.863	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_inv mE1_TFBS_sens
X	9224573	X_9224573_SNP [dm3] X_9330540_SNP [dm6]	A	C	2.017e^-5	0.863	UPSTREAM CG34450 DOWNSTREAM CG34449 INTRON CG34449
3L	15877326	3L_15877326_SNP [dm3] 3L_15884226_SNP [dm6]	G	T	2.042e^-5	0.863	DOWNSTREAM CR44050 INTRON pHCl
2L	17444982	2L_17444982_SNP [dm3] 2L_17444982_SNP [dm6]	C	G	2.050e^-5	0.863	INTRON dl
3L	12381148	3L_12381148_SNP [dm3] 3L_12388048_SNP [dm6]	G	T	2.058e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
2R	12147869	2R_12147869_INS [dm3] 2R_16260364_INS [dm6]	C	CTCC	2.076e^-5	0.863	UPSTREAM CngA INTERGENIC
3R	11861018	3R_11861018_DEL [dm3] 3R_16035296_DEL [dm6]	ACT	A	2.132e^-5	0.863	INTRON pnr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	12289151	3R_12289151_SNP [dm3] 3R_16463429_SNP [dm6]	C	G	2.187e^-5	0.863	SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	17600150	2L_17600150_SNP [dm3] 2L_17600150_SNP [dm6]	G	T	2.402e^-5	0.863	INTRON Sytalpha
3L	15877220	3L_15877220_SNP [dm3] 3L_15884120_SNP [dm6]	T	C	2.477e^-5	0.863	DOWNSTREAM CR44050 INTRON pHCl
3R	20727688	3R_20727688_SNP [dm3] 3R_24901966_SNP [dm6]	G	C	2.503e^-5	0.863	SYNONYMOUS_CODING CG10845 INTRON CG13643	TF binding site mE1_TFBS_HSA
3R	10377945	3R_10377945_SNP [dm3] 3R_14552223_SNP [dm6]	G	T	2.534e^-5	0.863	INTRON Pde6
3R	4960462	3R_4960462_SNP [dm3] 3R_9134740_SNP [dm6]	T	C	2.601e^-5	0.863	INTRON pum
2L	8128425	2L_8128425_DEL [dm3] 2L_8128425_DEL [dm6]	TTC	T	2.620e^-5	0.863	INTRON CG8668	TF binding site BDTNP1_TFBS_dl
3R	22621765	3R_22621765_SNP [dm3] 3R_26796043_SNP [dm6]	G	A	2.778e^-5	0.863	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2L	7773946	2L_7773946_SNP [dm3] 2L_7773946_SNP [dm6]	A	C	2.799e^-5	0.863	INTRON CG7191
3R	15876004	3R_15876004_SNP [dm3] 3R_20050282_SNP [dm6]	G	C	2.804e^-5	0.863	INTRON CG17193
X	15181879	X_15181879_SNP [dm3] X_15287846_SNP [dm6]	T	C	2.823e^-5	0.863	INTERGENIC
3L	1198152	3L_1198152_SNP [dm3] 3L_1198152_SNP [dm6]	C	T	2.946e^-5	0.863	SYNONYMOUS_CODING Aplip1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	9223510	X_9223510_SNP [dm3] X_9329477_SNP [dm6]	G	A	2.978e^-5	0.863	SYNONYMOUS_CODING CG34450 INTRON CG34449
3R	3230915	3R_3230915_SNP [dm3] 3R_7405193_SNP [dm6]	C	T	3.069e^-5	0.863	INTERGENIC
3R	16606144	3R_16606144_SNP [dm3] 3R_20780422_SNP [dm6]	G	T	3.100e^-5	0.863	UTR_5_PRIME Syp INTRON Syp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	20727509	3R_20727509_SNP [dm3] 3R_24901787_SNP [dm6]	T	C	3.173e^-5	0.863	NON_SYNONYMOUS_CODING CG10845 INTRON CG13643	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	5324048	X_5324048_SNP [dm3] X_5430015_SNP [dm6]	T	C	3.195e^-5	0.863	UTR_5_PRIME CG15784 UPSTREAM CG15784 DOWNSTREAM CR45517
2R	16770898	2R_16770898_SNP [dm3] 2R_20883393_SNP [dm6]	G	C	3.273e^-5	0.863	DOWNSTREAM otp & 1 other INTERGENIC
2R	17149229	2R_17149229_SNP [dm3] 2R_21261724_SNP [dm6]	A	G	3.332e^-5	0.863	INTRON Rgk3
2R	17001589	2R_17001589_SNP [dm3] 2R_21114084_SNP [dm6]	T	G	3.336e^-5	0.863	INTRON ktub
3R	10570162	3R_10570162_SNP [dm3] 3R_14744440_SNP [dm6]	A	G	3.401e^-5	0.863	INTRON jvl
X	6975832	X_6975832_INS [dm3] X_7081799_INS [dm6]	C	CT	3.411e^-5	0.863	INTRON Sxl
3R	8946395	3R_8946395_SNP [dm3] 3R_13120673_SNP [dm6]	C	A	3.437e^-5	0.863	INTRON timeout
X	16319043	X_16319043_SNP [dm3] X_16425010_SNP [dm6]	G	A	3.450e^-5	0.863	INTRON hang	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	9224569	X_9224569_INS [dm3] X_9330536_INS [dm6]	C	CTTTGTGTGTAGGAC...	3.558e^-5	0.863	UPSTREAM CG34450 DOWNSTREAM CG34449 INTRON CG34449
3R	12289607	3R_12289607_SNP [dm3] 3R_16463885_SNP [dm6]	A	G	3.597e^-5	0.863	SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
3R	5694576	3R_5694576_SNP [dm3] 3R_9868854_SNP [dm6]	T	A	3.645e^-5	0.863	UPSTREAM Teh1 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_ttk
3L	8435914	3L_8435914_SNP [dm3] 3L_8442814_SNP [dm6]	A	T	3.822e^-5	0.863	UPSTREAM Unr DOWNSTREAM CG6983 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8653142	3L_8653142_SNP [dm3] 3L_8660042_SNP [dm6]	G	C	3.907e^-5	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	19912084	3R_19912084_SNP [dm3] 3R_24086362_SNP [dm6]	T	A	3.924e^-5	0.863	INTRON 4EHP
2L	12389210	2L_12389210_SNP [dm3] 2L_12389210_SNP [dm6]	C	T	4.106e^-5	0.863	SYNONYMOUS_CODING bru-2 UTR_3_PRIME bru-2	TF binding site mE1_TFBS_sbb
3R	19912085	3R_19912085_SNP [dm3] 3R_24086363_SNP [dm6]	T	G	4.160e^-5	0.863	INTRON 4EHP
3R	16606324	3R_16606324_SNP [dm3] 3R_20780602_SNP [dm6]	G	A	4.164e^-5	0.863	UTR_5_PRIME Syp INTRON Syp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	13938753	3R_13938753_SNP [dm3] 3R_18113031_SNP [dm6]	G	A	4.241e^-5	0.863	INTRON sr
3L	7921250	3L_7921250_SNP [dm3] 3L_7928150_SNP [dm6]	C	A	4.304e^-5	0.863	INTRON syd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	12664941	2L_12664941_SNP [dm3] 2L_12664941_SNP [dm6]	C	T	4.344e^-5	0.863	INTRON pdm2	TF binding site mE1_TFBS_cad
3L	4418431	3L_4418431_SNP [dm3] 3L_4418431_SNP [dm6]	C	T	4.401e^-5	0.863	NON_SYNONYMOUS_CODING DOR UPSTREAM DOR
3R	15160447	3R_15160447_SNP [dm3] 3R_19334725_SNP [dm6]	A	G	4.456e^-5	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	13402211	3L_13402211_SNP [dm3] 3L_13409111_SNP [dm6]	A	G	4.475e^-5	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	13794833	3R_13794833_SNP [dm3] 3R_17969111_SNP [dm6]	A	G	4.535e^-5	0.863	INTRON cpo
2L	6464258	2L_6464258_SNP [dm3] 2L_6464258_SNP [dm6]	T	A	4.538e^-5	0.863	INTRON CG16947	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	11860762	3R_11860762_SNP [dm3] 3R_16035040_SNP [dm6]	C	T	4.542e^-5	0.863	UTR_5_PRIME pnr INTRON pnr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll mE1_TFBS_cad mE1_TFBS_HSA
X	9224651	X_9224651_INS [dm3] X_9330618_INS [dm6]	C	CATTCCTCAATTAC...	4.563e^-5	0.863	UPSTREAM CG34450 DOWNSTREAM CG34449 INTRON CG34449
2L	7076274	2L_7076274_SNP [dm3] 2L_7076274_SNP [dm6]	A	G	4.599e^-5	0.863	INTRON Pvf2	TF binding site mE1_TFBS_cad
X	12817512	X_12817512_SNP [dm3] X_12923479_SNP [dm6]	C	T	4.753e^-5	0.863	INTRON fne
3L	8653144	3L_8653144_SNP [dm3] 3L_8660044_SNP [dm6]	C	T	4.939e^-5	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	19912068	3R_19912068_DEL [dm3] 3R_24086346_DEL [dm6]	ACTTTAGTGAT...	G	5.042e^-5	0.863	INTRON 4EHP
2L	19915192	2L_19915192_SNP [dm3] 2L_19915192_SNP [dm6]	T	C	5.067e^-5	0.863	INTRON sick	TF binding site mE1_TFBS_bab1
3L	1487399	3L_1487399_SNP [dm3] 3L_1487399_SNP [dm6]	T	A	5.085e^-5	0.863	INTRON stet	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	12381145	3L_12381145_SNP [dm3] 3L_12388045_SNP [dm6]	G	C	5.098e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
2R	16523692	2R_16523692_SNP [dm3] 2R_20636187_SNP [dm6]	G	T	5.169e^-5	0.863	UPSTREAM CG13436 INTRON rig
3R	5694594	3R_5694594_SNP [dm3] 3R_9868872_SNP [dm6]	A	T	5.199e^-5	0.863	UPSTREAM Teh1 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_ttk
3L	12381120	3L_12381120_SNP [dm3] 3L_12388020_SNP [dm6]	C	T	5.223e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
X	9224592	X_9224592_SNP [dm3] X_9330559_SNP [dm6]	T	C	5.294e^-5	0.863	UPSTREAM CG34450 DOWNSTREAM CG34449 INTRON CG34449
3L	18332296	3L_18332296_MNP [dm3] 3L_18339196_MNP [dm6]	GTA	TGG	5.364e^-5	0.863	INTERGENIC	TF binding site mE1_TFBS_cad
2L	7772605	2L_7772605_SNP [dm3] 2L_7772605_SNP [dm6]	G	C	5.374e^-5	0.863	INTRON CG7191	TF binding site BDTNP1_TFBS_twi
2R	11352640	2R_11352640_SNP [dm3] 2R_15465135_SNP [dm6]	T	C	5.400e^-5	0.863	INTRON CG43729
X	6643083	X_6643083_INS [dm3] X_6749050_INS [dm6]	T	TCAGAGAT	5.452e^-5	0.863	INTRON CG14439
3L	5501074	3L_5501074_SNP [dm3] 3L_5507974_SNP [dm6]	T	C	5.564e^-5	0.863	INTRON CG34342
2R	12548291	2R_12548291_SNP [dm3] 2R_16660786_SNP [dm6]	C	G	5.593e^-5	0.863	INTRON Picot
X	6174789	X_6174789_SNP [dm3] X_6280756_SNP [dm6]	G	A	5.656e^-5	0.863	UPSTREAM CR32745 DOWNSTREAM CR45530 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	11149697	2L_11149697_SNP [dm3] 2L_11149697_SNP [dm6]	A	G	5.811e^-5	0.863	UPSTREAM Gyc32E INTERGENIC	TF binding site BDTNP1_TFBS_prd
2R	16523641	2R_16523641_SNP [dm3] 2R_20636136_SNP [dm6]	C	A	5.821e^-5	0.863	UPSTREAM CG13436 INTRON rig
3R	8946387	3R_8946387_SNP [dm3] 3R_13120665_SNP [dm6]	C	A	5.834e^-5	0.863	INTRON timeout
2L	7697940	2L_7697940_SNP [dm3] 2L_7697940_SNP [dm6]	C	A	5.946e^-5	0.863	INTRON Tep2
2L	8897844	2L_8897844_SNP [dm3] 2L_8897844_SNP [dm6]	C	G	5.955e^-5	0.863	UPSTREAM CG34398 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	16523449	2R_16523449_SNP [dm3] 2R_20635944_SNP [dm6]	A	T	6.007e^-5	0.863	NON_SYNONYMOUS_CODING rig UPSTREAM CG13436	TF binding site mE1_TFBS_cad
3L	7921272	3L_7921272_SNP [dm3] 3L_7928172_SNP [dm6]	A	T	6.085e^-5	0.863	INTRON syd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	1487346	3L_1487346_SNP [dm3] 3L_1487346_SNP [dm6]	G	A	6.206e^-5	0.863	INTRON stet	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_Trl
3L	7843151	3L_7843151_SNP [dm3] 3L_7850051_SNP [dm6]	T	C	6.346e^-5	0.863	INTRON Pdp1	regulatory region REDfly_CRMs
3L	13401871	3L_13401871_SNP [dm3] 3L_13408771_SNP [dm6]	T	C	6.386e^-5	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
2L	16442380	2L_16442380_SNP [dm3] 2L_16442380_SNP [dm6]	T	G	6.426e^-5	0.863	INTRON CG5888
2L	8307995	2L_8307995_SNP [dm3] 2L_8307995_SNP [dm6]	T	C	6.459e^-5	0.863	SYNONYMOUS_CODING Ostgamma UPSTREAM CG7818	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3R	13938851	3R_13938851_SNP [dm3] 3R_18113129_SNP [dm6]	G	C	6.535e^-5	0.863	INTRON sr
3L	13781604	3L_13781604_DEL [dm3] 3L_13788504_DEL [dm6]	TA	T	6.539e^-5	0.863	INTRON bru-3
2R	9120172	2R_9120172_SNP [dm3] 2R_13232667_SNP [dm6]	C	T	6.581e^-5	0.863	INTRON CG4670	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
3L	3530740	3L_3530740_SNP [dm3] 3L_3530740_SNP [dm6]	C	A	6.583e^-5	0.863	INTRON Eip63E
3R	20460083	3R_20460083_INS [dm3] 3R_24634361_INS [dm6]	C	CC	6.586e^-5	0.863	UTR_3_PRIME atl DOWNSTREAM CG43222 & 1 other
3L	4886541	3L_4886541_SNP [dm3] 3L_4886541_SNP [dm6]	G	C	6.629e^-5	0.863	INTRON CG17150
2R	12548319	2R_12548319_DEL [dm3] 2R_16660814_DEL [dm6]	TT	T	6.655e^-5	0.863	INTRON Picot
X	19057917	X_19057917_SNP [dm3] X_19163884_SNP [dm6]	C	G	6.750e^-5	0.863	INTRON RhoGAP18B	TF binding site mE1_TFBS_HSA
3R	11857665	3R_11857665_SNP [dm3] 3R_16031943_SNP [dm6]	T	A	6.800e^-5	0.863	INTRON pnr
3L	9355734	3L_9355734_SNP [dm3] 3L_9362634_SNP [dm6]	T	C	6.817e^-5	0.863	SYNONYMOUS_CODING CG34456 DOWNSTREAM Klp67A & 1 other
2R	12548339	2R_12548339_SNP [dm3] 2R_16660834_SNP [dm6]	G	C	6.821e^-5	0.863	INTRON Picot
3R	15289288	3R_15289288_SNP [dm3] 3R_19463566_SNP [dm6]	A	G	6.895e^-5	0.863	START_GAINED Dys UTR_5_PRIME Dys UPSTREAM CG6255 INTRON Dys	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
2R	20190214	2R_20190214_SNP [dm3] 2R_24302691_SNP [dm6]	T	G	6.924e^-5	0.863	INTERGENIC
3L	12381154	3L_12381154_DEL [dm3] 3L_12388054_DEL [dm6]	CTG	C	6.931e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
3L	12381159	3L_12381159_DEL [dm3] 3L_12388059_DEL [dm6]	ACTTTCA	A	6.931e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
3L	12381146	3L_12381146_SNP [dm3] 3L_12388046_SNP [dm6]	G	C	6.934e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
2R	7838495	2R_7838495_SNP [dm3] 2R_11950990_SNP [dm6]	A	G	6.938e^-5	0.863	INTRON CG13188
2R	16441925	2R_16441925_SNP [dm3] 2R_20554420_SNP [dm6]	G	A	6.951e^-5	0.863	INTERGENIC
3R	11857603	3R_11857603_SNP [dm3] 3R_16031881_SNP [dm6]	T	A	6.966e^-5	0.863	INTRON pnr
2R	7670229	2R_7670229_SNP [dm3] 2R_11782724_SNP [dm6]	C	T	7.025e^-5	0.863	INTRON ths
3R	12728238	3R_12728238_SNP [dm3] 3R_16902516_SNP [dm6]	T	G	7.096e^-5	0.863	INTRON iab-8	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	10855987	2L_10855987_SNP [dm3] 2L_10855987_SNP [dm6]	A	G	7.149e^-5	0.863	SYNONYMOUS_CODING Dnz1 DOWNSTREAM ial	TF binding site mE1_TFBS_cad
3R	8945304	3R_8945304_SNP [dm3] 3R_13119582_SNP [dm6]	A	G	7.309e^-5	0.863	INTRON timeout
3R	24215235	3R_24215235_DEL [dm3] 3R_28389513_DEL [dm6]	TT	T	7.327e^-5	0.863	INTERGENIC
3L	7175181	3L_7175181_SNP [dm3] 3L_7182081_SNP [dm6]	C	G	7.446e^-5	0.863	INTRON Dscam2
2R	12548348	2R_12548348_SNP [dm3] 2R_16660843_SNP [dm6]	G	T	7.505e^-5	0.863	INTRON Picot
2L	16442262	2L_16442262_SNP [dm3] 2L_16442262_SNP [dm6]	A	G	7.626e^-5	0.863	INTRON CG5888
2L	17600205	2L_17600205_SNP [dm3] 2L_17600205_SNP [dm6]	A	C	7.655e^-5	0.863	INTRON Sytalpha
3L	12381193	3L_12381193_SNP [dm3] 3L_12388093_SNP [dm6]	A	G	7.697e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
X	19397085	X_19397085_SNP [dm3] X_19503052_SNP [dm6]	T	C	7.708e^-5	0.863	INTRON Pfrx & 1 other
3R	12728313	3R_12728313_SNP [dm3] 3R_16902591_SNP [dm6]	A	G	7.708e^-5	0.863	INTRON iab-8	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	20737951	X_20737951_DEL [dm3] X_20866924_DEL [dm6]	TCT	T	7.757e^-5	0.863	INTRON shakB
3L	12381202	3L_12381202_SNP [dm3] 3L_12388102_SNP [dm6]	A	G	7.782e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
3L	5502951	3L_5502951_SNP [dm3] 3L_5509851_SNP [dm6]	A	G	7.835e^-5	0.863	INTRON CG34342	TF binding site mE1_TFBS_inv
X	17901755	X_17901755_SNP [dm3] X_18007722_SNP [dm6]	G	T	7.974e^-5	0.863	UPSTREAM CG12672 INTRON Sh
2L	16442394	2L_16442394_SNP [dm3] 2L_16442394_SNP [dm6]	T	A	8.000e^-5	0.863	INTRON CG5888
X	16205897	X_16205897_SNP [dm3] X_16311864_SNP [dm6]	C	G	8.101e^-5	0.863	SYNONYMOUS_CODING CG9915	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	10258444	X_10258444_SNP [dm3] X_10364411_SNP [dm6]	A	C	8.143e^-5	0.863	INTRON l_1_G0289	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	12082274	3L_12082274_SNP [dm3] 3L_12089174_SNP [dm6]	A	T	8.152e^-5	0.863	UTR_3_PRIME CG17154	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	7841437	2L_7841437_SNP [dm3] 2L_7841437_SNP [dm6]	C	A	8.239e^-5	0.863	DOWNSTREAM CG14537 INTERGENIC
3L	10551499	3L_10551499_SNP [dm3] 3L_10558399_SNP [dm6]	A	C	8.288e^-5	0.863	NON_SYNONYMOUS_CODING CG6527 INTRON A2bp1
3L	11187102	3L_11187102_SNP [dm3] 3L_11194002_SNP [dm6]	T	C	8.350e^-5	0.863	INTRON GlcAT-P
2R	13566102	2R_13566102_SNP [dm3] 2R_17678597_SNP [dm6]	T	C	8.379e^-5	0.863	UTR_5_PRIME Sema-1b	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	6435590	2R_6435590_SNP [dm3] 2R_10548085_SNP [dm6]	T	G	8.413e^-5	0.863	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3R	12289776	3R_12289776_SNP [dm3] 3R_16464054_SNP [dm6]	A	G	8.418e^-5	0.863	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
X	20715949	X_20715949_SNP [dm3] X_20844922_SNP [dm6]	A	C	8.462e^-5	0.863	INTRON shakB
3L	5502722	3L_5502722_SNP [dm3] 3L_5509622_SNP [dm6]	C	A	8.597e^-5	0.863	INTRON CG34342	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	15832342	3L_15832342_DEL [dm3] 3L_15839242_DEL [dm6]	TATACATAT	T	8.651e^-5	0.863	INTRON CG32150	TF binding site BDTNP1_TFBS_dl
3R	11860917	3R_11860917_SNP [dm3] 3R_16035195_SNP [dm6]	A	G	8.682e^-5	0.863	INTRON pnr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll
3L	8667576	3L_8667576_SNP [dm3] 3L_8674476_SNP [dm6]	T	C	8.786e^-5	0.863	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
X	5296972	X_5296972_SNP [dm3] X_5402939_SNP [dm6]	G	A	8.825e^-5	0.863	UTR_3_PRIME SK INTRON SK
3R	10759789	3R_10759789_SNP [dm3] 3R_14934067_SNP [dm6]	C	G	8.946e^-5	0.863	INTERGENIC
3L	15877663	3L_15877663_SNP [dm3] 3L_15884563_SNP [dm6]	G	A	8.997e^-5	0.863	DOWNSTREAM CR44050 INTRON pHCl
3L	9193523	3L_9193523_SNP [dm3] 3L_9200423_SNP [dm6]	G	A	9.050e^-5	0.863	INTERGENIC
X	6590589	X_6590589_SNP [dm3] X_6696556_SNP [dm6]	T	C	9.069e^-5	0.863	UTR_3_PRIME CG14440 DOWNSTREAM CG14440	TF binding site BDTNP1_TFBS_dl
3R	22621772	3R_22621772_DEL [dm3] 3R_26796050_DEL [dm6]	TAAGATATCTAC...	T	9.121e^-5	0.863	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	12381174	3L_12381174_DEL [dm3] 3L_12388074_DEL [dm6]	TTTGTTGTCTGT...	T	9.244e^-5	0.863	UPSTREAM Ncc69 INTRON Ncc69
X	18153595	X_18153595_SNP [dm3] X_18259562_SNP [dm6]	G	C	9.259e^-5	0.863	UPSTREAM CG15059 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_HSA mE1_TFBS_sens
X	18153604	X_18153604_SNP [dm3] X_18259571_SNP [dm6]	A	G	9.259e^-5	0.863	UPSTREAM CG15059 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_HSA mE1_TFBS_sens
X	5296111	X_5296111_SNP [dm3] X_5402078_SNP [dm6]	A	C	9.300e^-5	0.863	UTR_3_PRIME SK DOWNSTREAM SK INTRON SK
3R	12753398	3R_12753398_SNP [dm3] 3R_16927676_SNP [dm6]	T	C	9.327e^-5	0.863	UTR_3_PRIME Abd-B
2L	12232540	2L_12232540_SNP [dm3] 2L_12232540_SNP [dm6]	T	C	9.329e^-5	0.863	INTRON aret
2L	8826352	2L_8826352_SNP [dm3] 2L_8826352_SNP [dm6]	A	C	9.383e^-5	0.863	UTR_5_PRIME SoxN	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	12047517	3L_12047517_SNP [dm3] 3L_12054417_SNP [dm6]	G	A	9.417e^-5	0.863	INTRON rols
3R	12289778	3R_12289778_SNP [dm3] 3R_16464056_SNP [dm6]	G	A	9.457e^-5	0.863	SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
2L	16504461	2L_16504461_SNP [dm3] 2L_16504461_SNP [dm6]	C	A	9.515e^-5	0.863	INTRON Tpr2
X	6933659	X_6933659_SNP [dm3] X_7039626_SNP [dm6]	G	C	9.613e^-5	0.863	UPSTREAM CG14427 INTRON CG12541	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	16159445	3L_16159445_SNP [dm3] 3L_16166345_SNP [dm6]	A	C	9.665e^-5	0.863	INTERGENIC
3R	20706588	3R_20706588_SNP [dm3] 3R_24880866_SNP [dm6]	G	A	9.722e^-5	0.863	SYNONYMOUS_CODING CG11089 DOWNSTREAM CG31121	TF binding site mE1_TFBS_cad
3R	15278284	3R_15278284_SNP [dm3] 3R_19452562_SNP [dm6]	T	G	9.759e^-5	0.863	INTRON CG31221	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr
2R	12319527	2R_12319527_SNP [dm3] 2R_16432022_SNP [dm6]	A	G	9.778e^-5	0.863	UPSTREAM CG4398 DOWNSTREAM Sema-2b INTERGENIC	TF binding site mE1_TFBS_HSA
3R	18401882	3R_18401882_SNP [dm3] 3R_22576160_SNP [dm6]	C	G	9.835e^-5	0.863	INTRON CG33110
X	18070944	X_18070944_SNP [dm3] X_18176911_SNP [dm6]	G	A	9.885e^-5	0.863	UPSTREAM Frq2 INTERGENIC
2L	13623736	2L_13623736_SNP [dm3] 2L_13623736_SNP [dm6]	C	T	9.891e^-5	0.863	INTRON kuz	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10213163	3L_10213163_SNP [dm3] 3L_10220063_SNP [dm6]	C	G	9.903e^-5	0.863	SYNONYMOUS_CODING CG32055 DOWNSTREAM scramb1
3R	3234256	3R_3234256_SNP [dm3] 3R_7408534_SNP [dm6]	C	T	9.908e^-5	0.863	NON_SYNONYMOUS_CODING Ir84a
2R	16523349	2R_16523349_SNP [dm3] 2R_20635844_SNP [dm6]	C	T	9.932e^-5	0.863	NON_SYNONYMOUS_CODING rig UPSTREAM CG13436	TF binding site mE1_TFBS_cad
3R	15875936	3R_15875936_SNP [dm3] 3R_20050214_SNP [dm6]	G	A	9.945e^-5	0.863	INTRON CG17193
3L	13275202	3L_13275202_SNP [dm3] 3L_13282102_SNP [dm6]	C	T	1.006e^-4	0.863	UPSTREAM CR43146 INTERGENIC
3L	8653150	3L_8653150_SNP [dm3] 3L_8660050_SNP [dm6]	G	C	1.010e^-4	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	22299435	3R_22299435_SNP [dm3] 3R_26473713_SNP [dm6]	G	A	1.018e^-4	0.863	SYNONYMOUS_CODING plum	TF binding site mE1_TFBS_chinmo
X	2362718	X_2362718_SNP [dm3] X_2468685_SNP [dm6]	A	G	1.020e^-4	0.863	INTRON boi	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	9913036	3L_9913036_SNP [dm3] 3L_9919936_SNP [dm6]	G	C	1.022e^-4	0.863	INTRON CG34356
3L	4992385	3L_4992385_SNP [dm3] 3L_4992385_SNP [dm6]	C	A	1.033e^-4	0.863	INTRON Con	TF binding site BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2L	11254844	2L_11254844_SNP [dm3] 2L_11254844_SNP [dm6]	A	G	1.035e^-4	0.863	INTRON ab
X	6643082	X_6643082_INS [dm3] X_6749049_INS [dm6]	A	AACAGAGA	1.038e^-4	0.863	INTRON CG14439
3L	7921390	3L_7921390_SNP [dm3] 3L_7928290_SNP [dm6]	G	A	1.042e^-4	0.863	SYNONYMOUS_CODING syd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	12664945	2L_12664945_SNP [dm3] 2L_12664945_SNP [dm6]	A	G	1.042e^-4	0.863	INTRON pdm2	TF binding site mE1_TFBS_cad
X	17901762	X_17901762_SNP [dm3] X_18007729_SNP [dm6]	A	T	1.044e^-4	0.863	UPSTREAM CG12672 INTRON Sh
3L	12047526	3L_12047526_SNP [dm3] 3L_12054426_SNP [dm6]	T	A	1.046e^-4	0.863	INTRON rols
2L	21592464	2L_21592464_SNP [dm3] 2L_21592464_SNP [dm6]	G	A	1.048e^-4	0.863	INTERGENIC	TF binding site mE1_TFBS_cad transposable element FlyBase
X	16298655	X_16298655_INS [dm3] X_16404622_INS [dm6]	T	TGCT	1.050e^-4	0.863	UTR_5_PRIME CG9981 UPSTREAM CG9981 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	19912088	3R_19912088_DEL [dm3] 3R_24086366_DEL [dm6]	TTCAGCAAATTT...	T	1.051e^-4	0.863	INTRON 4EHP
3L	16128599	3L_16128599_SNP [dm3] 3L_16135499_SNP [dm6]	G	A	1.062e^-4	0.863	SYNONYMOUS_CODING CG16838 DOWNSTREAM CG5157
3L	3578672	3L_3578672_SNP [dm3] 3L_3578672_SNP [dm6]	T	C	1.064e^-4	0.863	INTRON Eip63E	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	6780327	2L_6780327_SNP [dm3] 2L_6780327_SNP [dm6]	C	T	1.066e^-4	0.863	INTRON nrv1
3L	12082277	3L_12082277_SNP [dm3] 3L_12089177_SNP [dm6]	G	A	1.067e^-4	0.863	UTR_3_PRIME CG17154	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	19915711	2L_19915711_SNP [dm3] 2L_19915711_SNP [dm6]	C	A	1.068e^-4	0.863	INTRON sick	TF binding site mE1_TFBS_bab1
3L	12486316	3L_12486316_SNP [dm3] 3L_12493216_SNP [dm6]	G	A	1.079e^-4	0.863	SYNONYMOUS_CODING CG10657 EXON CR45682	TF binding site mE1_TFBS_cad
3L	17572464	3L_17572464_INS [dm3] 3L_17579364_INS [dm6]	C	CAGACTTAGTGTTACATATA...	1.081e^-4	0.863	INTRON Eip74EF
X	6933653	X_6933653_SNP [dm3] X_7039620_SNP [dm6]	C	T	1.081e^-4	0.863	UPSTREAM CG14427 INTRON CG12541	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3R	19911281	3R_19911281_SNP [dm3] 3R_24085559_SNP [dm6]	T	A	1.083e^-4	0.863	INTRON 4EHP
2R	17134172	2R_17134172_SNP [dm3] 2R_21246667_SNP [dm6]	A	G	1.087e^-4	0.863	INTRON ASPP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	5503754	3L_5503754_SNP [dm3] 3L_5510654_SNP [dm6]	C	A	1.093e^-4	0.863	INTRON CG34342
2L	17224015	2L_17224015_SNP [dm3] 2L_17224015_SNP [dm6]	A	C	1.104e^-4	0.863	INTRON beat-IIIc	TF binding site mE1_TFBS_cad
3L	10427530	3L_10427530_SNP [dm3] 3L_10434430_SNP [dm6]	A	T	1.105e^-4	0.863	UPSTREAM Ir67c INTERGENIC
3R	18814600	3R_18814600_SNP [dm3] 3R_22988878_SNP [dm6]	G	C	1.114e^-4	0.863	UPSTREAM Or94b DOWNSTREAM Or94a INTRON Nha2
3R	12728165	3R_12728165_SNP [dm3] 3R_16902443_SNP [dm6]	A	G	1.117e^-4	0.863	INTRON iab-8	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	16842486	2R_16842486_SNP [dm3] 2R_20954981_SNP [dm6]	T	C	1.132e^-4	0.863	NON_SYNONYMOUS_CODING hbn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	12290373	3R_12290373_SNP [dm3] 3R_16464651_SNP [dm6]	T	G	1.140e^-4	0.863	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	10188886	3L_10188886_SNP [dm3] 3L_10195786_SNP [dm6]	C	T	1.144e^-4	0.863	INTRON ect
2L	6131796	2L_6131796_SNP [dm3] 2L_6131796_SNP [dm6]	C	T	1.148e^-4	0.863	SYNONYMOUS_CODING CG9222	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	16011173	3R_16011173_SNP [dm3] 3R_20185451_SNP [dm6]	G	A	1.151e^-4	0.863	INTERGENIC
3L	5503792	3L_5503792_SNP [dm3] 3L_5510692_SNP [dm6]	C	A	1.154e^-4	0.863	INTRON CG34342
3L	18422353	3L_18422353_INS [dm3] 3L_18429253_INS [dm6]	T	TC	1.158e^-4	0.863	INTERGENIC
2L	9191350	2L_9191350_INS [dm3] 2L_9191350_INS [dm6]	G	GCGATGG	1.168e^-4	0.863	INTRON tai	TF binding site mE1_TFBS_HSA
2R	7257954	2R_7257954_SNP [dm3] 2R_11370449_SNP [dm6]	C	A	1.171e^-4	0.863	UTR_3_PRIME Tapdelta DOWNSTREAM CG13204	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_sens
3L	13413790	3L_13413790_SNP [dm3] 3L_13420690_SNP [dm6]	C	T	1.172e^-4	0.863	INTRON CG32121
3R	5733594	3R_5733594_SNP [dm3] 3R_9907872_SNP [dm6]	T	C	1.178e^-4	0.863	INTRON Glut4EF
2L	19856063	2L_19856063_SNP [dm3] 2L_19856063_SNP [dm6]	G	T	1.189e^-4	0.863	SPLICE_SITE_ACCEPTOR sick INTRON sick
X	8983903	X_8983903_SNP [dm3] X_9089870_SNP [dm6]	G	A	1.191e^-4	0.863	DOWNSTREAM CG6999 INTRON CG7033	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	660780	3L_660780_SNP [dm3] 3L_660780_SNP [dm6]	C	T	1.195e^-4	0.863	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	9556534	3L_9556534_SNP [dm3] 3L_9563434_SNP [dm6]	A	T	1.204e^-4	0.863	INTRON CG42673
2L	13623955	2L_13623955_SNP [dm3] 2L_13623955_SNP [dm6]	G	A	1.206e^-4	0.863	INTRON kuz	TF binding site mE1_TFBS_HSA
2L	11149712	2L_11149712_SNP [dm3] 2L_11149712_SNP [dm6]	T	C	1.207e^-4	0.863	UPSTREAM Gyc32E INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	16536397	X_16536397_SNP [dm3] X_16642364_SNP [dm6]	A	T	1.215e^-4	0.863	SYNONYMOUS_CODING mthl1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2L	6131895	2L_6131895_SNP [dm3] 2L_6131895_SNP [dm6]	T	C	1.217e^-4	0.863	SYNONYMOUS_CODING CG9222	TF binding site mE1_TFBS_sens
3L	4417016	3L_4417016_SNP [dm3] 3L_4417016_SNP [dm6]	G	A	1.230e^-4	0.863	INTRON DOR
X	18531995	X_18531995_SNP [dm3] X_18637962_SNP [dm6]	C	T	1.237e^-4	0.863	INTRON Rip11	TF binding site mE1_TFBS_cad
2R	16523673	2R_16523673_SNP [dm3] 2R_20636168_SNP [dm6]	A	C	1.242e^-4	0.863	UPSTREAM CG13436 INTRON rig
X	18071021	X_18071021_SNP [dm3] X_18176988_SNP [dm6]	C	T	1.247e^-4	0.863	UPSTREAM Frq2 INTERGENIC
2L	3567485	2L_3567485_SNP [dm3] 2L_3567485_SNP [dm6]	T	C	1.254e^-4	0.863	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	12390230	2L_12390230_SNP [dm3] 2L_12390230_SNP [dm6]	G	A	1.257e^-4	0.863	INTRON bru-2
3L	16651616	3L_16651616_SNP [dm3] 3L_16658516_SNP [dm6]	T	C	1.260e^-4	0.863	INTRON Baldspot
X	9308286	X_9308286_INS [dm3] X_9414253_INS [dm6]	A	AAGAATGA	1.261e^-4	0.863	INTRON mgl
3L	10791534	3L_10791534_SNP [dm3] 3L_10798434_SNP [dm6]	G	A	1.264e^-4	0.863	INTERGENIC
3L	11003498	3L_11003498_SNP [dm3] 3L_11010398_SNP [dm6]	G	A	1.267e^-4	0.863	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_zfh1
3L	6724951	3L_6724951_SNP [dm3] 3L_6731851_SNP [dm6]	C	T	1.274e^-4	0.863	SYNONYMOUS_CODING dikar	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	11817519	X_11817519_SNP [dm3] X_11923486_SNP [dm6]	T	A	1.279e^-4	0.863	UPSTREAM Sclp INTRON Sclp
3L	12329498	3L_12329498_SNP [dm3] 3L_12336398_SNP [dm6]	G	T	1.280e^-4	0.863	UPSTREAM CG10418 & 1 other DOWNSTREAM CG32105 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
X	10259321	X_10259321_SNP [dm3] X_10365288_SNP [dm6]	T	G	1.281e^-4	0.863	INTRON l_1_G0289	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	18561206	X_18561206_SNP [dm3] X_18667173_SNP [dm6]	A	C	1.294e^-4	0.863	DOWNSTREAM CR45514 INTERGENIC
3L	13285113	3L_13285113_SNP [dm3] 3L_13292013_SNP [dm6]	T	G	1.295e^-4	0.863	UPSTREAM CR43912 INTERGENIC
2L	19013168	2L_19013168_SNP [dm3] 2L_19013168_SNP [dm6]	G	A	1.296e^-4	0.863	DOWNSTREAM CR45292 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	12728250	3R_12728250_SNP [dm3] 3R_16902528_SNP [dm6]	C	T	1.297e^-4	0.863	INTRON iab-8	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	19671442	2R_19671442_SNP [dm3] 2R_23783919_SNP [dm6]	C	T	1.297e^-4	0.863	INTRON CG9850
2L	12476223	2L_12476223_SNP [dm3] 2L_12476223_SNP [dm6]	T	A	1.299e^-4	0.863	INTRON bun
2L	7648163	2L_7648163_SNP [dm3] 2L_7648163_SNP [dm6]	C	G	1.299e^-4	0.863	INTRON Slob
2L	7451630	2L_7451630_SNP [dm3] 2L_7451630_SNP [dm6]	A	G	1.300e^-4	0.863	UPSTREAM santa-maria DOWNSTREAM Gr28a INTERGENIC	TF binding site BDTNP1_TFBS_ftz
X	18543108	X_18543108_SNP [dm3] X_18649075_SNP [dm6]	C	A	1.301e^-4	0.863	SYNONYMOUS_CODING CG6540 DOWNSTREAM CG6617	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	7842469	2L_7842469_SNP [dm3] 2L_7842469_SNP [dm6]	T	G	1.307e^-4	0.863	INTERGENIC
3L	4417292	3L_4417292_SNP [dm3] 3L_4417292_SNP [dm6]	A	C	1.308e^-4	0.863	INTRON DOR
2L	17445037	2L_17445037_SNP [dm3] 2L_17445037_SNP [dm6]	A	G	1.314e^-4	0.863	INTRON dl
3L	10213174	3L_10213174_SNP [dm3] 3L_10220074_SNP [dm6]	A	G	1.332e^-4	0.863	NON_SYNONYMOUS_CODING CG32055 DOWNSTREAM scramb1
X	18022951	X_18022951_SNP [dm3] X_18128918_SNP [dm6]	T	A	1.332e^-4	0.863	DOWNSTREAM mir-210 & 1 other INTERGENIC
3L	11174943	3L_11174943_SNP [dm3] 3L_11181843_SNP [dm6]	A	G	1.341e^-4	0.863	INTRON GlcAT-P
X	8963271	X_8963271_SNP [dm3] X_9069238_SNP [dm6]	T	C	1.342e^-4	0.863	UPSTREAM CR45538 DOWNSTREAM CG10970 INTERGENIC
2L	6463103	2L_6463103_SNP [dm3] 2L_6463103_SNP [dm6]	C	A	1.345e^-4	0.863	INTRON CG16947	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	12728208	3R_12728208_SNP [dm3] 3R_16902486_SNP [dm6]	G	A	1.348e^-4	0.863	INTRON iab-8	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	11889838	3R_11889838_SNP [dm3] 3R_16064116_SNP [dm6]	C	T	1.349e^-4	0.863	SYNONYMOUS_CODING CG10185	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	3024576	X_3024576_SNP [dm3] X_3130543_SNP [dm6]	T	A	1.359e^-4	0.863	INTRON kirre	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	25481325	3R_25481325_SNP [dm3] 3R_29655603_SNP [dm6]	C	T	1.359e^-4	0.863	INTRON Dop1R2
3R	21437226	3R_21437226_SNP [dm3] 3R_25611504_SNP [dm6]	G	A	1.360e^-4	0.863	INTRON Npl4
3R	12728249	3R_12728249_SNP [dm3] 3R_16902527_SNP [dm6]	A	T	1.361e^-4	0.863	INTRON iab-8	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	4417022	3L_4417022_SNP [dm3] 3L_4417022_SNP [dm6]	A	G	1.362e^-4	0.863	INTRON DOR
3L	3530735	3L_3530735_SNP [dm3] 3L_3530735_SNP [dm6]	C	A	1.373e^-4	0.863	INTRON Eip63E
3L	7174839	3L_7174839_SNP [dm3] 3L_7181739_SNP [dm6]	T	G	1.384e^-4	0.863	INTRON Dscam2
3L	15777536	3L_15777536_SNP [dm3] 3L_15784436_SNP [dm6]	T	A	1.386e^-4	0.863	INTERGENIC
2R	3983143	2R_3983143_SNP [dm3] 2R_8095638_SNP [dm6]	A	G	1.388e^-4	0.863	SYNONYMOUS_CODING CG8713	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	7216352	2L_7216352_DEL [dm3] 2L_7216352_DEL [dm6]	TACACCA	T	1.394e^-4	0.863	INTRON CG13784
X	17167397	X_17167397_SNP [dm3] X_17273364_SNP [dm6]	T	C	1.396e^-4	0.863	INTRON f	TF binding site mE1_TFBS_cad
2R	17149147	2R_17149147_SNP [dm3] 2R_21261642_SNP [dm6]	T	C	1.398e^-4	0.863	INTRON Rgk3
2L	4732093	2L_4732093_SNP [dm3] 2L_4732093_SNP [dm6]	C	T	1.400e^-4	0.863	DOWNSTREAM CG15631 INTERGENIC
2L	7648334	2L_7648334_SNP [dm3] 2L_7648334_SNP [dm6]	T	A	1.407e^-4	0.863	INTRON Slob
3R	26112435	3R_26112435_SNP [dm3] 3R_30286713_SNP [dm6]	G	C	1.409e^-4	0.863	INTRON hdc	TF binding site BDTNP1_TFBS_dl
2L	16442524	2L_16442524_SNP [dm3] 2L_16442524_SNP [dm6]	C	T	1.409e^-4	0.863	INTRON CG5888
2L	8145281	2L_8145281_SNP [dm3] 2L_8145281_SNP [dm6]	C	T	1.416e^-4	0.863	UPSTREAM CG43394 & 1 other INTRON CG8552	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	16653431	3R_16653431_SNP [dm3] 3R_20827709_SNP [dm6]	T	A	1.433e^-4	0.863	DOWNSTREAM CR44047 INTRON AdSS & 1 other	TF binding site BDTNP1_TFBS_twi
3L	5507010	3L_5507010_INS [dm3] 3L_5513910_INS [dm6]	AA	TGCCT	1.447e^-4	0.863	INTRON Lkr
2L	2424321	2L_2424321_DEL [dm3] 2L_2424321_DEL [dm6]	GTTCACTCCGAACA...	TATATAT	1.449e^-4	0.863	UTR_3_PRIME CG9886 UPSTREAM CG44139
3L	8145763	3L_8145763_SNP [dm3] 3L_8152663_SNP [dm6]	T	A	1.450e^-4	0.863	UPSTREAM CG13676 INTERGENIC
3R	3277770	3R_3277770_SNP [dm3] 3R_7452048_SNP [dm6]	A	G	1.451e^-4	0.863	UPSTREAM tRNA:V3b:84Da DOWNSTREAM tRNA:V3b:84Db & 1 other INTERGENIC
3L	18058361	3L_18058361_SNP [dm3] 3L_18065261_SNP [dm6]	T	A	1.472e^-4	0.863	UPSTREAM Eip75B INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
2L	17458186	2L_17458186_SNP [dm3] 2L_17458186_SNP [dm6]	A	T	1.473e^-4	0.863	UPSTREAM CG18563 INTRON CG5050	transposable element FlyBase
2R	16523621	2R_16523621_SNP [dm3] 2R_20636116_SNP [dm6]	G	A	1.479e^-4	0.863	UPSTREAM CG13436 INTRON rig	TF binding site mE1_TFBS_cad
X	9195348	X_9195348_SNP [dm3] X_9301315_SNP [dm6]	C	T	1.482e^-4	0.863	INTRON lz
3L	13925163	3L_13925163_SNP [dm3] 3L_13932063_SNP [dm6]	G	C	1.486e^-4	0.863	NON_SYNONYMOUS_CODING Gl	TF binding site mE1_TFBS_cad
3L	17533878	3L_17533878_SNP [dm3] 3L_17540778_SNP [dm6]	T	C	1.487e^-4	0.863	SYNONYMOUS_CODING Nedd4
3L	19454407	3L_19454407_SNP [dm3] 3L_19461307_SNP [dm6]	G	C	1.494e^-4	0.863	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	15777515	3L_15777515_SNP [dm3] 3L_15784415_SNP [dm6]	T	A	1.497e^-4	0.863	INTERGENIC
3L	4101331	3L_4101331_SNP [dm3] 3L_4101331_SNP [dm6]	T	A	1.502e^-4	0.863	UPSTREAM CG14995 INTRON CG14995
3L	9845740	3L_9845740_DEL [dm3] 3L_9852640_DEL [dm6]	AGCA	A	1.503e^-4	0.863	INTRON RasGAP1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Kr
3L	5503788	3L_5503788_SNP [dm3] 3L_5510688_SNP [dm6]	T	A	1.503e^-4	0.863	INTRON CG34342
2R	16841712	2R_16841712_SNP [dm3] 2R_20954207_SNP [dm6]	G	C	1.506e^-4	0.863	DOWNSTREAM hbn INTERGENIC	TF binding site BDTNP1_TFBS_da
X	18070883	X_18070883_SNP [dm3] X_18176850_SNP [dm6]	A	G	1.508e^-4	0.863	UPSTREAM Frq2 INTERGENIC
2R	13784124	2R_13784124_SNP [dm3] 2R_17896619_SNP [dm6]	C	A	1.511e^-4	0.863	INTRON Elk	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	5324021	X_5324021_SNP [dm3] X_5429988_SNP [dm6]	T	A	1.516e^-4	0.863	UTR_5_PRIME CG15784 UPSTREAM CG15784 DOWNSTREAM CR45517
X	8963272	X_8963272_SNP [dm3] X_9069239_SNP [dm6]	T	C	1.518e^-4	0.863	UPSTREAM CR45538 DOWNSTREAM CG10970 INTERGENIC
3R	15361556	3R_15361556_SNP [dm3] 3R_19535834_SNP [dm6]	C	A	1.521e^-4	0.863	INTRON Dys
3R	9401127	3R_9401127_SNP [dm3] 3R_13575405_SNP [dm6]	C	G	1.522e^-4	0.863	EXON CR43848
3R	15160460	3R_15160460_SNP [dm3] 3R_19334738_SNP [dm6]	A	G	1.522e^-4	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3R	15997471	3R_15997471_SNP [dm3] 3R_20171749_SNP [dm6]	C	T	1.523e^-4	0.863	INTRON CG5023
2L	2181164	2L_2181164_SNP [dm3] 2L_2181164_SNP [dm6]	G	A	1.528e^-4	0.863	UPSTREAM CR43751 INTERGENIC	enhancer mE1_CBP_Enhancers regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
X	19451831	X_19451831_SNP [dm3] X_19557798_SNP [dm6]	T	C	1.532e^-4	0.863	UPSTREAM mir-4966 & 1 other DOWNSTREAM mir-2499 INTERGENIC
3R	20706601	3R_20706601_SNP [dm3] 3R_24880879_SNP [dm6]	T	C	1.538e^-4	0.863	SYNONYMOUS_CODING CG11089 DOWNSTREAM CG31121	TF binding site mE1_TFBS_cad
2L	7453756	2L_7453756_SNP [dm3] 2L_7453756_SNP [dm6]	C	T	1.541e^-4	0.863	SYNONYMOUS_CODING Gr28a
2R	8893723	2R_8893723_SNP [dm3] 2R_13006218_SNP [dm6]	G	A	1.543e^-4	0.863	UTR_3_PRIME Su_z_2	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9946173	2L_9946173_SNP [dm3] 2L_9946173_SNP [dm6]	C	T	1.551e^-4	0.863	INTRON CG5853	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	8953575	3R_8953575_SNP [dm3] 3R_13127853_SNP [dm6]	C	T	1.560e^-4	0.863	NON_SYNONYMOUS_CODING 2mit INTRON timeout
X	18022947	X_18022947_SNP [dm3] X_18128914_SNP [dm6]	T	C	1.561e^-4	0.863	DOWNSTREAM mir-210 & 1 other INTERGENIC
3L	10266257	3L_10266257_SNP [dm3] 3L_10273157_SNP [dm6]	T	C	1.564e^-4	0.863	UPSTREAM Or67d INTERGENIC	regulatory region REDfly_CRMs
2R	13982955	2R_13982955_SNP [dm3] 2R_18095450_SNP [dm6]	A	G	1.566e^-4	0.863	UTR_5_PRIME CG5098 UPSTREAM CG5757 INTRON CG5098	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Ubx
3L	12405935	3L_12405935_SNP [dm3] 3L_12412835_SNP [dm6]	A	C	1.571e^-4	0.863	INTRON CG32103
3L	10791531	3L_10791531_SNP [dm3] 3L_10798431_SNP [dm6]	A	C	1.573e^-4	0.863	INTERGENIC
2L	7648125	2L_7648125_SNP [dm3] 2L_7648125_SNP [dm6]	C	T	1.578e^-4	0.863	INTRON Slob
3L	5503758	3L_5503758_SNP [dm3] 3L_5510658_SNP [dm6]	T	A	1.582e^-4	0.863	INTRON CG34342
X	12666004	X_12666004_SNP [dm3] X_12771971_SNP [dm6]	C	T	1.585e^-4	0.863	UTR_3_PRIME CG3812 & 1 other DOWNSTREAM CG3812
2L	2291774	2L_2291774_SNP [dm3] 2L_2291774_SNP [dm6]	A	G	1.587e^-4	0.863	INTERGENIC
X	16298682	X_16298682_SNP [dm3] X_16404649_SNP [dm6]	G	T	1.589e^-4	0.863	UTR_5_PRIME CG9981 UPSTREAM CG9981 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	12289656	3R_12289656_SNP [dm3] 3R_16463934_SNP [dm6]	G	T	1.590e^-4	0.863	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
3R	12289705	3R_12289705_SNP [dm3] 3R_16463983_SNP [dm6]	C	T	1.619e^-4	0.863	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
3L	12306040	3L_12306040_INS [dm3] 3L_12312940_INS [dm6]	T	TAAGGCT	1.622e^-4	0.863	DOWNSTREAM CG44355 INTERGENIC
2L	17697599	2L_17697599_INS [dm3] 2L_17697599_INS [dm6]	C	CTAAG	1.623e^-4	0.863	INTRON CadN
X	16298661	X_16298661_SNP [dm3] X_16404628_SNP [dm6]	A	G	1.626e^-4	0.863	UTR_5_PRIME CG9981 UPSTREAM CG9981 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	16146323	3L_16146323_INS [dm3] 3L_16153223_INS [dm6]	T	TT	1.627e^-4	0.863	INTRON CG5151
2L	6214707	2L_6214707_SNP [dm3] 2L_6214707_SNP [dm6]	A	G	1.627e^-4	0.863	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	16134041	3L_16134041_SNP [dm3] 3L_16140941_SNP [dm6]	A	T	1.634e^-4	0.863	SYNONYMOUS_CODING CG5151 UTR_3_PRIME CG32152	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	12477695	2L_12477695_DEL [dm3] 2L_12477695_DEL [dm6]	GC	G	1.647e^-4	0.863	INTRON bun
2L	3115005	2L_3115005_DEL [dm3] 2L_3115005_DEL [dm6]	CATATTC	C	1.653e^-4	0.863	INTRON toc
3L	5503781	3L_5503781_SNP [dm3] 3L_5510681_SNP [dm6]	T	A	1.661e^-4	0.863	INTRON CG34342
3R	15877657	3R_15877657_SNP [dm3] 3R_20051935_SNP [dm6]	T	C	1.669e^-4	0.863	INTRON CG17193	TF binding site BDTNP1_TFBS_twi
X	18532079	X_18532079_SNP [dm3] X_18638046_SNP [dm6]	C	G	1.675e^-4	0.863	INTRON Rip11	TF binding site mE1_TFBS_cad
2L	11150009	2L_11150009_SNP [dm3] 2L_11150009_SNP [dm6]	G	T	1.678e^-4	0.863	UPSTREAM Gyc32E INTERGENIC	TF binding site BDTNP1_TFBS_prd
2R	16342505	2R_16342505_SNP [dm3] 2R_20455000_SNP [dm6]	C	T	1.686e^-4	0.863	INTRON CG12484
2R	17025699	2R_17025699_SNP [dm3] 2R_21138194_SNP [dm6]	T	G	1.686e^-4	0.863	INTRON Magi	TF binding site mE1_TFBS_chinmo
3L	12959609	3L_12959609_SNP [dm3] 3L_12966509_SNP [dm6]	A	T	1.687e^-4	0.863	UPSTREAM Or69a INTRON Or69a
X	5296891	X_5296891_SNP [dm3] X_5402858_SNP [dm6]	G	A	1.688e^-4	0.863	UTR_3_PRIME SK INTRON SK
3R	18443108	3R_18443108_SNP [dm3] 3R_22617386_SNP [dm6]	C	T	1.692e^-4	0.863	SYNONYMOUS_CODING CG31161 DOWNSTREAM EF-G2	TF binding site mE1_TFBS_sens
3R	3249718	3R_3249718_SNP [dm3] 3R_7423996_SNP [dm6]	G	C	1.697e^-4	0.863	DOWNSTREAM wa-cup INTERGENIC
X	5296114	X_5296114_SNP [dm3] X_5402081_SNP [dm6]	A	T	1.700e^-4	0.863	UTR_3_PRIME SK DOWNSTREAM SK INTRON SK
X	5605084	X_5605084_INS [dm3] X_5711051_INS [dm6]	A	AA	1.700e^-4	0.863	INTRON CG33080	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_ftz_f1
X	18023006	X_18023006_SNP [dm3] X_18128973_SNP [dm6]	A	G	1.702e^-4	0.863	DOWNSTREAM mir-210 & 1 other INTERGENIC
2L	18286684	2L_18286684_SNP [dm3] 2L_18286684_SNP [dm6]	G	A	1.704e^-4	0.863	UPSTREAM CG31787 INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	14123679	3L_14123679_SNP [dm3] 3L_14130579_SNP [dm6]	T	C	1.705e^-4	0.863	UTR_5_PRIME Sox21b INTRON Sox21b
X	18071035	X_18071035_SNP [dm3] X_18177002_SNP [dm6]	G	C	1.709e^-4	0.863	UPSTREAM Frq2 INTERGENIC
3L	5502661	3L_5502661_SNP [dm3] 3L_5509561_SNP [dm6]	A	G	1.712e^-4	0.863	INTRON CG34342	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	3262533	3R_3262533_SNP [dm3] 3R_7436811_SNP [dm6]	C	A	1.717e^-4	0.863	INTERGENIC
3L	10999225	3L_10999225_SNP [dm3] 3L_11006125_SNP [dm6]	A	G	1.725e^-4	0.863	INTRON klu
2L	12248224	2L_12248224_SNP [dm3] 2L_12248224_SNP [dm6]	T	A	1.731e^-4	0.863	INTRON aret
3L	2234152	3L_2234152_SNP [dm3] 3L_2234152_SNP [dm6]	G	A	1.732e^-4	0.863	SYNONYMOUS_CODING Oseg2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	4417055	3L_4417055_SNP [dm3] 3L_4417055_SNP [dm6]	G	C	1.735e^-4	0.863	INTRON DOR
2L	8190540	2L_8190540_SNP [dm3] 2L_8190540_SNP [dm6]	C	G	1.736e^-4	0.863	SYNONYMOUS_CODING CG34134 DOWNSTREAM CG8475 & 1 other	TF binding site mE1_TFBS_cad
2L	2290548	2L_2290548_SNP [dm3] 2L_2290548_SNP [dm6]	G	A	1.741e^-4	0.863	SYNONYMOUS_CODING robl22E
2L	9769209	2L_9769209_SNP [dm3] 2L_9769209_SNP [dm6]	A	G	1.742e^-4	0.863	SYNONYMOUS_CODING CG17633 DOWNSTREAM CG4017 INTRON ppk18	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	3250762	3R_3250762_SNP [dm3] 3R_7425040_SNP [dm6]	A	T	1.750e^-4	0.863	INTERGENIC
X	18022966	X_18022966_DEL [dm3] X_18128933_DEL [dm6]	AAACAAAGAAA...	A	1.752e^-4	0.863	DOWNSTREAM mir-210 & 1 other INTERGENIC
3R	10920363	3R_10920363_DEL [dm3] 3R_15094641_DEL [dm6]	TTG	T	1.757e^-4	0.863	INTRON CG6966	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3L	4417146	3L_4417146_SNP [dm3] 3L_4417146_SNP [dm6]	A	G	1.757e^-4	0.863	INTRON DOR
3L	19178467	3L_19178467_SNP [dm3] 3L_19185367_SNP [dm6]	A	G	1.760e^-4	0.863	INTRON fz2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2R	7282968	2R_7282968_SNP [dm3] 2R_11395463_SNP [dm6]	G	C	1.764e^-4	0.863	INTRON sprt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
X	15644998	X_15644998_SNP [dm3] X_15750965_SNP [dm6]	G	A	1.767e^-4	0.863	UTR_3_PRIME CG8239 DOWNSTREAM Graf	TF binding site mE1_TFBS_cad
3L	12112911	3L_12112911_SNP [dm3] 3L_12119811_SNP [dm6]	T	G	1.776e^-4	0.863	UPSTREAM CG11560 DOWNSTREAM ssp INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	9391302	3L_9391302_SNP [dm3] 3L_9398202_SNP [dm6]	T	G	1.776e^-4	0.863	INTRON CG4080	TF binding site BDTNP1_TFBS_dl mE1_TFBS_disco mE1_TFBS_HSA
3R	27002191	3R_27002191_SNP [dm3] 3R_31176469_SNP [dm6]	C	T	1.780e^-4	0.863	INTRON Gycbeta100B
3R	23840789	3R_23840789_SNP [dm3] 3R_28015067_SNP [dm6]	A	G	1.781e^-4	0.863	INTERGENIC
2L	8180517	2L_8180517_SNP [dm3] 2L_8180517_SNP [dm6]	G	C	1.783e^-4	0.863	NON_SYNONYMOUS_CODING Piezo INTRON Piezo	TF binding site mE1_TFBS_cad
3R	13969167	3R_13969167_SNP [dm3] 3R_18143445_SNP [dm6]	G	A	1.785e^-4	0.863	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	14987850	3R_14987850_SNP [dm3] 3R_19162128_SNP [dm6]	T	C	1.808e^-4	0.863	SYNONYMOUS_CODING CG42358 UTR_5_PRIME CG42359	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
X	16298680	X_16298680_SNP [dm3] X_16404647_SNP [dm6]	C	T	1.818e^-4	0.863	UTR_5_PRIME CG9981 UPSTREAM CG9981 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	2888922	3L_2888922_SNP [dm3] 3L_2888922_SNP [dm6]	C	T	1.824e^-4	0.863	SYNONYMOUS_CODING spz5
3L	9998982	3L_9998982_SNP [dm3] 3L_10005882_SNP [dm6]	T	C	1.825e^-4	0.863	INTRON dpr6
3R	10570696	3R_10570696_SNP [dm3] 3R_14744974_SNP [dm6]	T	A	1.827e^-4	0.863	DOWNSTREAM smp-30 INTRON jvl
2L	8897870	2L_8897870_SNP [dm3] 2L_8897870_SNP [dm6]	G	A	1.828e^-4	0.863	UPSTREAM CG34398 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	7282982	2R_7282982_SNP [dm3] 2R_11395477_SNP [dm6]	T	G	1.834e^-4	0.863	INTRON sprt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	19414691	3R_19414691_SNP [dm3] 3R_23588969_SNP [dm6]	C	A	1.836e^-4	0.863	NON_SYNONYMOUS_CODING CG10182 SPLICE_SITE_REGION CG10182
X	15632174	X_15632174_SNP [dm3] X_15738141_SNP [dm6]	G	T	1.836e^-4	0.863	NON_SYNONYMOUS_CODING CG11679	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	9087885	X_9087885_SNP [dm3] X_9193852_SNP [dm6]	C	T	1.845e^-4	0.863	UPSTREAM CG12106 DOWNSTREAM CG12056 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 mE1_TFBS_jumu
2L	10856237	2L_10856237_SNP [dm3] 2L_10856237_SNP [dm6]	T	C	1.850e^-4	0.863	SYNONYMOUS_CODING Dnz1 DOWNSTREAM ial	TF binding site mE1_TFBS_cad
3R	15877628	3R_15877628_SNP [dm3] 3R_20051906_SNP [dm6]	A	C	1.855e^-4	0.863	INTRON CG17193	TF binding site BDTNP1_TFBS_twi
3L	4417211	3L_4417211_SNP [dm3] 3L_4417211_SNP [dm6]	C	T	1.857e^-4	0.863	INTRON DOR
X	15644982	X_15644982_SNP [dm3] X_15750949_SNP [dm6]	G	C	1.861e^-4	0.863	UTR_3_PRIME CG8239 DOWNSTREAM Graf	TF binding site mE1_TFBS_cad
3R	23525775	3R_23525775_SNP [dm3] 3R_27700053_SNP [dm6]	T	C	1.861e^-4	0.863	UTR_5_PRIME ALiX UPSTREAM btz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	18992690	X_18992690_SNP [dm3] X_19098657_SNP [dm6]	A	T	1.862e^-4	0.863	INTERGENIC
3L	11003503	3L_11003503_SNP [dm3] 3L_11010403_SNP [dm6]	T	C	1.862e^-4	0.863	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_zfh1
3L	10813783	3L_10813783_SNP [dm3] 3L_10820683_SNP [dm6]	G	C	1.871e^-4	0.863	INTERGENIC
2R	12276760	2R_12276760_SNP [dm3] 2R_16389255_SNP [dm6]	T	C	1.877e^-4	0.863	INTRON Sema-2b
3R	15875730	3R_15875730_SNP [dm3] 3R_20050008_SNP [dm6]	A	G	1.877e^-4	0.863	INTRON CG17193
X	18071022	X_18071022_SNP [dm3] X_18176989_SNP [dm6]	T	A	1.878e^-4	0.863	UPSTREAM Frq2 INTERGENIC
2L	2050076	2L_2050076_SNP [dm3] 2L_2050076_SNP [dm6]	A	T	1.883e^-4	0.863	INTERGENIC
2L	7145004	2L_7145004_SNP [dm3] 2L_7145004_SNP [dm6]	C	A	1.889e^-4	0.863	INTRON Pvf3 EXON CR44612	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	11817625	X_11817625_SNP [dm3] X_11923592_SNP [dm6]	G	C	1.892e^-4	0.863	UPSTREAM Sclp INTRON Sclp
2L	2050077	2L_2050077_SNP [dm3] 2L_2050077_SNP [dm6]	T	C	1.893e^-4	0.863	INTERGENIC
3R	9814364	3R_9814364_SNP [dm3] 3R_13988642_SNP [dm6]	C	G	1.899e^-4	0.863	INTRON rdx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3L	9681455	3L_9681455_DEL [dm3] 3L_9688355_DEL [dm6]	GAG	G	1.900e^-4	0.863	INTRON CG6767	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	5891789	X_5891789_SNP [dm3] X_5997756_SNP [dm6]	A	G	1.901e^-4	0.863	UTR_3_PRIME CG4766	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	10266258	3L_10266258_SNP [dm3] 3L_10273158_SNP [dm6]	G	A	1.919e^-4	0.863	UPSTREAM Or67d INTERGENIC	regulatory region REDfly_CRMs
X	18022996	X_18022996_SNP [dm3] X_18128963_SNP [dm6]	C	T	1.928e^-4	0.863	DOWNSTREAM mir-210 & 1 other INTERGENIC
3R	11889864	3R_11889864_SNP [dm3] 3R_16064142_SNP [dm6]	A	G	1.928e^-4	0.863	SYNONYMOUS_CODING CG10185	TF binding site mE1_TFBS_HSA
2L	10964354	2L_10964354_SNP [dm3] 2L_10964354_SNP [dm6]	A	C	1.929e^-4	0.863	UPSTREAM dpr2 DOWNSTREAM CG33129 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_ttk
2R	20220463	2R_20220463_SNP [dm3] 2R_24332940_SNP [dm6]	G	A	1.936e^-4	0.863	SYNONYMOUS_CODING slbo	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	1061219	3L_1061219_SNP [dm3] 3L_1061219_SNP [dm6]	G	T	1.938e^-4	0.863	INTRON bab1
X	8407002	X_8407002_SNP [dm3] X_8512969_SNP [dm6]	C	G	1.939e^-4	0.863	INTRON CG33181
3L	10212819	3L_10212819_SNP [dm3] 3L_10219719_SNP [dm6]	A	T	1.944e^-4	0.863	NON_SYNONYMOUS_CODING CG32055 DOWNSTREAM scramb1
3L	16154744	3L_16154744_SNP [dm3] 3L_16161644_SNP [dm6]	G	C	1.945e^-4	0.863	INTRON CG5151	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	15323061	2R_15323061_SNP [dm3] 2R_19435556_SNP [dm6]	T	G	1.954e^-4	0.863	SPLICE_SITE_REGION Fak INTRON Fak
2L	6257339	2L_6257339_SNP [dm3] 2L_6257339_SNP [dm6]	C	T	1.955e^-4	0.863	DOWNSTREAM CG9486 INTRON Ddr
3L	7291614	3L_7291614_SNP [dm3] 3L_7298514_SNP [dm6]	T	G	1.956e^-4	0.863	INTRON unc-13-4A
X	6975858	X_6975858_SNP [dm3] X_7081825_SNP [dm6]	G	C	1.969e^-4	0.865	INTRON Sxl	TF binding site BDTNP1_TFBS_dl
3R	8667916	3R_8667916_SNP [dm3] 3R_12842194_SNP [dm6]	C	T	1.974e^-4	0.865	UTR_3_PRIME beat-Va
3L	11546354	3L_11546354_INS [dm3] 3L_11553254_INS [dm6]	A	AA	1.975e^-4	0.865	UPSTREAM mir-4968 & 1 other INTRON Mob2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
3L	11238153	3L_11238153_SNP [dm3] 3L_11245053_SNP [dm6]	G	A	1.979e^-4	0.865	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
3R	23118727	3R_23118727_DEL [dm3] 3R_27293005_DEL [dm6]	GCTG	G	1.984e^-4	0.866	UPSTREAM CG3348 INTERGENIC
2R	7058720	2R_7058720_SNP [dm3] 2R_11171215_SNP [dm6]	A	C	1.996e^-4	0.869	INTRON shn & 1 other
2L	14836514	2L_14836514_SNP [dm3] 2L_14836514_SNP [dm6]	A	C	2.002e^-4	0.869	INTERGENIC
3L	18575400	3L_18575400_SNP [dm3] 3L_18582300_SNP [dm6]	T	C	2.014e^-4	0.87	INTERGENIC
3R	15828588	3R_15828588_SNP [dm3] 3R_20002866_SNP [dm6]	G	A	2.023e^-4	0.87	INTRON Hs6st	TF binding site mE1_TFBS_cad
3R	12290467	3R_12290467_SNP [dm3] 3R_16464745_SNP [dm6]	A	C	2.025e^-4	0.87	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	12319506	2R_12319506_DEL [dm3] 2R_16432001_DEL [dm6]	CAACC	C	2.038e^-4	0.87	UPSTREAM CG4398 DOWNSTREAM Sema-2b INTERGENIC	TF binding site mE1_TFBS_HSA
2L	16442479	2L_16442479_SNP [dm3] 2L_16442479_SNP [dm6]	A	T	2.040e^-4	0.87	INTRON CG5888
3L	9586813	3L_9586813_SNP [dm3] 3L_9593713_SNP [dm6]	G	A	2.050e^-4	0.87	SYNONYMOUS_CODING CG42673 INTRON CG42673	TF binding site mE1_TFBS_chinmo
2R	18905002	2R_18905002_SNP [dm3] 2R_23017479_SNP [dm6]	T	A	2.073e^-4	0.87	INTRON twi & 1 other
3R	26973895	3R_26973895_SNP [dm3] 3R_31148173_SNP [dm6]	A	G	2.079e^-4	0.87	INTRON Gycbeta100B
X	20715937	X_20715937_SNP [dm3] X_20844910_SNP [dm6]	T	C	2.080e^-4	0.87	INTRON shakB
2L	508219	2L_508219_SNP [dm3] 2L_508219_SNP [dm6]	G	A	2.087e^-4	0.87	INTRON ush
2L	7648425	2L_7648425_SNP [dm3] 2L_7648425_SNP [dm6]	G	A	2.088e^-4	0.87	INTRON Slob
2R	7432751	2R_7432751_SNP [dm3] 2R_11545246_SNP [dm6]	A	G	2.093e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_chinmo
X	14842413	X_14842413_SNP [dm3] X_14948380_SNP [dm6]	G	A	2.100e^-4	0.87	INTRON pdgy	TF binding site mE1_TFBS_HSA
2L	2050073	2L_2050073_SNP [dm3] 2L_2050073_SNP [dm6]	C	G	2.106e^-4	0.87	INTERGENIC
3R	27194316	3R_27194316_SNP [dm3] 3R_31368594_SNP [dm6]	C	A	2.109e^-4	0.87	INTRON CG34347
3R	9814348	3R_9814348_SNP [dm3] 3R_13988626_SNP [dm6]	T	G	2.111e^-4	0.87	INTRON rdx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
2L	12232839	2L_12232839_SNP [dm3] 2L_12232839_SNP [dm6]	G	T	2.128e^-4	0.87	INTRON aret
3R	12743791	3R_12743791_SNP [dm3] 3R_16918069_SNP [dm6]	A	T	2.130e^-4	0.87	INTRON iab-8
2R	16342288	2R_16342288_SNP [dm3] 2R_20454783_SNP [dm6]	T	A	2.133e^-4	0.87	INTRON CG12484
3L	16239639	3L_16239639_SNP [dm3] 3L_16246539_SNP [dm6]	G	A	2.133e^-4	0.87	INTERGENIC
3L	4417068	3L_4417068_SNP [dm3] 3L_4417068_SNP [dm6]	C	T	2.145e^-4	0.87	INTRON DOR
3L	12405962	3L_12405962_SNP [dm3] 3L_12412862_SNP [dm6]	C	G	2.152e^-4	0.87	INTRON CG32103
3R	3243494	3R_3243494_SNP [dm3] 3R_7417772_SNP [dm6]	T	G	2.161e^-4	0.87	INTERGENIC
2R	16542139	2R_16542139_SNP [dm3] 2R_20654634_SNP [dm6]	A	G	2.162e^-4	0.87	INTRON Lrt & 1 other
3R	15007805	3R_15007805_INS [dm3] 3R_19182083_INS [dm6]	A	ATA	2.171e^-4	0.87	INTRON CG31475
2R	18320978	2R_18320978_SNP [dm3] 2R_22433473_SNP [dm6]	A	T	2.178e^-4	0.87	INTERGENIC
3R	12290753	3R_12290753_SNP [dm3] 3R_16465031_SNP [dm6]	T	G	2.183e^-4	0.87	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	20190213	2R_20190213_SNP [dm3] 2R_24302690_SNP [dm6]	T	A	2.186e^-4	0.87	INTERGENIC
X	9223498	X_9223498_SNP [dm3] X_9329465_SNP [dm6]	G	A	2.195e^-4	0.87	SYNONYMOUS_CODING CG34450 INTRON CG34449
3L	10814698	3L_10814698_SNP [dm3] 3L_10821598_SNP [dm6]	T	C	2.195e^-4	0.87	INTERGENIC
3R	9932632	3R_9932632_SNP [dm3] 3R_14106910_SNP [dm6]	T	G	2.199e^-4	0.87	NON_SYNONYMOUS_CODING CG12402	TF binding site mE1_TFBS_sens
3L	12486596	3L_12486596_SNP [dm3] 3L_12493496_SNP [dm6]	A	G	2.209e^-4	0.87	INTRON CG10657 EXON CR45682	TF binding site mE1_TFBS_cad
3L	16922252	3L_16922252_SNP [dm3] 3L_16929152_SNP [dm6]	A	G	2.210e^-4	0.87	SYNONYMOUS_CODING CG11905 DOWNSTREAM CG11905	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	13925607	3L_13925607_SNP [dm3] 3L_13932507_SNP [dm6]	T	C	2.211e^-4	0.87	SYNONYMOUS_CODING Gl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8896855	2L_8896855_SNP [dm3] 2L_8896855_SNP [dm6]	C	T	2.217e^-4	0.87	INTERGENIC
2L	483511	2L_483511_SNP [dm3] 2L_483511_SNP [dm6]	C	T	2.225e^-4	0.87	INTRON ush	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2R	16523408	2R_16523408_SNP [dm3] 2R_20635903_SNP [dm6]	C	T	2.240e^-4	0.87	SYNONYMOUS_CODING rig UPSTREAM CG13436	TF binding site mE1_TFBS_cad
X	8414703	X_8414703_SNP [dm3] X_8520670_SNP [dm6]	A	G	2.245e^-4	0.87	INTRON Nrg
3L	2232586	3L_2232586_SNP [dm3] 3L_2232586_SNP [dm6]	A	G	2.248e^-4	0.87	SYNONYMOUS_CODING Oseg2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	6039678	2L_6039678_SNP [dm3] 2L_6039678_SNP [dm6]	G	A	2.260e^-4	0.87	SYNONYMOUS_CODING CG31643	TF binding site mE1_TFBS_cad
2L	7648122	2L_7648122_SNP [dm3] 2L_7648122_SNP [dm6]	A	C	2.261e^-4	0.87	INTRON Slob
X	18023003	X_18023003_SNP [dm3] X_18128970_SNP [dm6]	A	G	2.265e^-4	0.87	DOWNSTREAM mir-210 & 1 other INTERGENIC
3L	13925601	3L_13925601_SNP [dm3] 3L_13932501_SNP [dm6]	C	T	2.269e^-4	0.87	SYNONYMOUS_CODING Gl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8145202	2L_8145202_DEL [dm3] 2L_8145202_DEL [dm6]	AAA	A	2.270e^-4	0.87	UPSTREAM CG43394 & 1 other INTRON CG8552	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	20443305	3R_20443305_SNP [dm3] 3R_24617583_SNP [dm6]	T	C	2.282e^-4	0.87	SYNONYMOUS_CODING mld	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	10113595	3L_10113595_SNP [dm3] 3L_10120495_SNP [dm6]	C	A	2.283e^-4	0.87	INTRON dpr6
2L	15780533	2L_15780533_SNP [dm3] 2L_15780533_SNP [dm6]	T	C	2.291e^-4	0.87	INTERGENIC	TF binding site mE1_TFBS_HSA
X	15406665	X_15406665_SNP [dm3] X_15512632_SNP [dm6]	T	C	2.291e^-4	0.87	UTR_3_PRIME Ac13E
2R	14693472	2R_14693472_SNP [dm3] 2R_18805967_SNP [dm6]	C	T	2.293e^-4	0.87	INTRON CR44468 EXON CR44468	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	12329348	3L_12329348_SNP [dm3] 3L_12336248_SNP [dm6]	T	G	2.294e^-4	0.87	UPSTREAM CG10418 DOWNSTREAM CG32105 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	4960073	3R_4960073_SNP [dm3] 3R_9134351_SNP [dm6]	C	T	2.322e^-4	0.87	INTRON pum
X	8712869	X_8712869_SNP [dm3] X_8818836_SNP [dm6]	C	T	2.322e^-4	0.87	INTERGENIC
3L	17632616	3L_17632616_SNP [dm3] 3L_17639516_SNP [dm6]	G	A	2.328e^-4	0.87	SYNONYMOUS_CODING Pep UTR_3_PRIME Pep	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	17224215	2L_17224215_SNP [dm3] 2L_17224215_SNP [dm6]	G	A	2.329e^-4	0.87	INTRON beat-IIIc
2L	8145106	2L_8145106_SNP [dm3] 2L_8145106_SNP [dm6]	C	T	2.343e^-4	0.87	UTR_5_PRIME CG42763 UPSTREAM CG43394 INTRON CG8552	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	10215825	3L_10215825_SNP [dm3] 3L_10222725_SNP [dm6]	A	G	2.344e^-4	0.87	INTRON scramb1
3R	24794437	3R_24794437_SNP [dm3] 3R_28968715_SNP [dm6]	T	C	2.345e^-4	0.87	INTRON CG14521
3R	16753364	3R_16753364_SNP [dm3] 3R_20927642_SNP [dm6]	G	A	2.347e^-4	0.87	UTR_3_PRIME hdly DOWNSTREAM hdly INTRON CG31191 & 1 other
3R	12741611	3R_12741611_SNP [dm3] 3R_16915889_SNP [dm6]	T	A	2.349e^-4	0.87	INTRON iab-8	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	9395795	3L_9395795_SNP [dm3] 3L_9402695_SNP [dm6]	C	T	2.349e^-4	0.87	UPSTREAM eIF-4E INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3R	18814538	3R_18814538_SNP [dm3] 3R_22988816_SNP [dm6]	A	G	2.351e^-4	0.87	UPSTREAM Or94b DOWNSTREAM Or94a INTRON Nha2
3L	15073052	3L_15073052_SNP [dm3] 3L_15079952_SNP [dm6]	C	T	2.358e^-4	0.87	UPSTREAM cp309 INTRON cp309	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	13634481	3L_13634481_INS [dm3] 3L_13641381_INS [dm6]	G	GGTGG	2.360e^-4	0.87	INTRON bru-3	TF binding site mE1_TFBS_chinmo
2R	13578743	2R_13578743_SNP [dm3] 2R_17691238_SNP [dm6]	G	A	2.363e^-4	0.87	SYNONYMOUS_CODING swi2 DOWNSTREAM HPS4	TF binding site mE1_TFBS_cad
2R	20192356	2R_20192356_SNP [dm3] 2R_24304833_SNP [dm6]	C	T	2.365e^-4	0.87	INTERGENIC	regulatory region REDfly_CRMs
3L	4118831	3L_4118831_SNP [dm3] 3L_4118831_SNP [dm6]	G	A	2.371e^-4	0.87	INTRON Chd64
3R	18466567	3R_18466567_INS [dm3] 3R_22640845_INS [dm6]	T	TT	2.380e^-4	0.87	INTRON CG45058
X	16177069	X_16177069_SNP [dm3] X_16283036_SNP [dm6]	A	G	2.394e^-4	0.87	INTRON eas	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	15289307	3R_15289307_SNP [dm3] 3R_19463585_SNP [dm6]	C	A	2.395e^-4	0.87	UTR_5_PRIME Dys UPSTREAM CG6255 INTRON Dys	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
3L	6703265	3L_6703265_SNP [dm3] 3L_6710165_SNP [dm6]	T	A	2.397e^-4	0.87	INTERGENIC
3L	4417406	3L_4417406_SNP [dm3] 3L_4417406_SNP [dm6]	G	A	2.398e^-4	0.87	INTRON DOR
X	12125599	X_12125599_SNP [dm3] X_12231566_SNP [dm6]	A	G	2.410e^-4	0.87	INTRON Ten-a
X	18022995	X_18022995_SNP [dm3] X_18128962_SNP [dm6]	A	T	2.413e^-4	0.87	DOWNSTREAM mir-210 & 1 other INTERGENIC
X	16653736	X_16653736_SNP [dm3] X_16759703_SNP [dm6]	G	C	2.421e^-4	0.87	INTRON if
2R	6994275	2R_6994275_SNP [dm3] 2R_11106770_SNP [dm6]	G	T	2.424e^-4	0.87	UTR_5_PRIME luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	12876821	2R_12876821_SNP [dm3] 2R_16989316_SNP [dm6]	A	T	2.430e^-4	0.87	INTRON Cbp53E	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	17784033	2R_17784033_SNP [dm3] 2R_21896528_SNP [dm6]	T	C	2.431e^-4	0.87	INTRON Fili	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	16132020	3L_16132020_SNP [dm3] 3L_16138920_SNP [dm6]	C	T	2.432e^-4	0.87	UTR_3_PRIME CG5151 DOWNSTREAM CG5151 & 1 other
3R	27194287	3R_27194287_SNP [dm3] 3R_31368565_SNP [dm6]	G	A	2.437e^-4	0.87	INTRON CG34347
2R	11691465	2R_11691465_DEL [dm3] 2R_15803960_DEL [dm6]	AAT	A	2.437e^-4	0.87	INTRON tun & 1 other
2L	12478123	2L_12478123_SNP [dm3] 2L_12478123_SNP [dm6]	A	G	2.441e^-4	0.87	INTRON bun	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	2808150	3R_2808150_SNP [dm3] 3R_6982428_SNP [dm6]	G	A	2.444e^-4	0.87	INTRON Antp
2L	5823432	2L_5823432_SNP [dm3] 2L_5823432_SNP [dm6]	G	A	2.474e^-4	0.87	UPSTREAM TrissinR INTERGENIC
2L	8308437	2L_8308437_SNP [dm3] 2L_8308437_SNP [dm6]	A	G	2.475e^-4	0.87	UTR_5_PRIME CG7818 UPSTREAM Ostgamma	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	16523072	2R_16523072_SNP [dm3] 2R_20635567_SNP [dm6]	G	A	2.477e^-4	0.87	SYNONYMOUS_CODING rig UPSTREAM CG13436	TF binding site mE1_TFBS_cad
2R	17067603	2R_17067603_SNP [dm3] 2R_21180098_SNP [dm6]	A	G	2.481e^-4	0.87	SYNONYMOUS_CODING Pu	TF binding site mE1_TFBS_chinmo
3R	15761553	3R_15761553_SNP [dm3] 3R_19935831_SNP [dm6]	G	C	2.485e^-4	0.87	UPSTREAM mira INTRON Hs6st	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10124802	X_10124802_SNP [dm3] X_10230769_SNP [dm6]	A	G	2.486e^-4	0.87	DOWNSTREAM CG34408 & 1 other INTERGENIC
3R	15289688	3R_15289688_SNP [dm3] 3R_19463966_SNP [dm6]	T	C	2.491e^-4	0.87	UPSTREAM CG6255 INTRON Dys	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
2R	4113976	2R_4113976_SNP [dm3] 2R_8226471_SNP [dm6]	C	G	2.492e^-4	0.87	DOWNSTREAM LRP1 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8145807	3L_8145807_SNP [dm3] 3L_8152707_SNP [dm6]	G	C	2.499e^-4	0.87	UPSTREAM CG13676 INTERGENIC
2R	4057536	2R_4057536_SNP [dm3] 2R_8170031_SNP [dm6]	G	C	2.502e^-4	0.87	UTR_3_PRIME Gasz UPSTREAM Mlh1
3R	11859578	3R_11859578_SNP [dm3] 3R_16033856_SNP [dm6]	C	T	2.505e^-4	0.87	UPSTREAM pnr INTRON pnr	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	3160582	X_3160582_DEL [dm3] X_3266549_DEL [dm6]	TTG	CA	2.514e^-4	0.87	INTRON dnc
3R	3262641	3R_3262641_SNP [dm3] 3R_7436919_SNP [dm6]	A	T	2.516e^-4	0.87	INTERGENIC
3R	12743806	3R_12743806_SNP [dm3] 3R_16918084_SNP [dm6]	A	G	2.516e^-4	0.87	INTRON iab-8
3R	8945285	3R_8945285_SNP [dm3] 3R_13119563_SNP [dm6]	A	G	2.527e^-4	0.87	INTRON timeout
2R	17033283	2R_17033283_SNP [dm3] 2R_21145778_SNP [dm6]	C	A	2.537e^-4	0.87	UPSTREAM Hmg-2 DOWNSTREAM Xbp1 INTERGENIC
3R	9194133	3R_9194133_SNP [dm3] 3R_13368411_SNP [dm6]	T	G	2.541e^-4	0.87	SYNONYMOUS_CODING Dic1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	8826709	2L_8826709_SNP [dm3] 2L_8826709_SNP [dm6]	T	C	2.544e^-4	0.87	SYNONYMOUS_CODING SoxN	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	8189912	2L_8189912_SNP [dm3] 2L_8189912_SNP [dm6]	G	A	2.545e^-4	0.87	UTR_3_PRIME Piezo DOWNSTREAM CG34134 & 1 other
3R	17702939	3R_17702939_SNP [dm3] 3R_21877217_SNP [dm6]	C	T	2.557e^-4	0.87	SYNONYMOUS_CODING CG6656 UPSTREAM P5CDh2 DOWNSTREAM CG34148	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	9120220	2R_9120220_SNP [dm3] 2R_13232715_SNP [dm6]	G	A	2.557e^-4	0.87	INTRON CG4670	TF binding site BDTNP1_TFBS_sna mE1_TFBS_HSA
2L	11150013	2L_11150013_DEL [dm3] 2L_11150013_DEL [dm6]	AA	A	2.564e^-4	0.87	UPSTREAM Gyc32E INTERGENIC	TF binding site BDTNP1_TFBS_prd
2L	8139751	2L_8139751_SNP [dm3] 2L_8139751_SNP [dm6]	A	C	2.564e^-4	0.87	SYNONYMOUS_CODING CG8552 UTR_5_PRIME CG8552	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	18390033	2R_18390033_SNP [dm3] 2R_22502528_SNP [dm6]	A	C	2.568e^-4	0.87	INTRON px
2R	9120107	2R_9120107_SNP [dm3] 2R_13232602_SNP [dm6]	A	C	2.569e^-4	0.87	DOWNSTREAM fsd INTRON CG4670	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
2L	15788003	2L_15788003_SNP [dm3] 2L_15788003_SNP [dm6]	A	G	2.572e^-4	0.87	NON_SYNONYMOUS_CODING CG18109	TF binding site mE1_TFBS_sens
X	18022999	X_18022999_SNP [dm3] X_18128966_SNP [dm6]	C	T	2.580e^-4	0.87	DOWNSTREAM mir-210 & 1 other INTERGENIC
2L	14007217	2L_14007217_SNP [dm3] 2L_14007217_SNP [dm6]	T	C	2.580e^-4	0.87	UPSTREAM CG42692 INTERGENIC
3L	8158558	3L_8158558_DEL [dm3] 3L_8165458_DEL [dm6]	GGGGCTCTG	G	2.581e^-4	0.87	UTR_5_PRIME CG13675
3R	20509250	3R_20509250_SNP [dm3] 3R_24683528_SNP [dm6]	C	T	2.584e^-4	0.87	INTRON slo
3R	24794388	3R_24794388_SNP [dm3] 3R_28968666_SNP [dm6]	C	G	2.590e^-4	0.87	INTRON CG14521
2R	20174717	2R_20174717_SNP [dm3] 2R_24287194_SNP [dm6]	A	G	2.591e^-4	0.87	INTRON nvy	TF binding site mE1_TFBS_chinmo
3L	8490744	3L_8490744_SNP [dm3] 3L_8497644_SNP [dm6]	A	T	2.603e^-4	0.87	INTRON CG43163	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	9401198	3R_9401198_SNP [dm3] 3R_13575476_SNP [dm6]	A	T	2.608e^-4	0.87	EXON CR43848
3R	11895123	3R_11895123_SNP [dm3] 3R_16069401_SNP [dm6]	T	A	2.624e^-4	0.87	DOWNSTREAM Mhcl INTRON Mhcl	TF binding site mE1_TFBS_cad
2L	6794097	2L_6794097_SNP [dm3] 2L_6794097_SNP [dm6]	T	C	2.630e^-4	0.87	INTRON nrv2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	12855462	2L_12855462_SNP [dm3] 2L_12855462_SNP [dm6]	C	T	2.640e^-4	0.87	INTERGENIC
2R	9090348	2R_9090348_SNP [dm3] 2R_13202843_SNP [dm6]	T	A	2.644e^-4	0.87	UTR_3_PRIME lat & 1 other DOWNSTREAM Aats-val	TF binding site mE1_TFBS_cad
X	9088059	X_9088059_SNP [dm3] X_9194026_SNP [dm6]	A	G	2.645e^-4	0.87	UTR_5_PRIME CG12106 DOWNSTREAM CG12056 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1
3L	21420122	3L_21420122_SNP [dm3] 3L_21427022_SNP [dm6]	A	C	2.646e^-4	0.87	UPSTREAM CG33288 INTRON barc
3L	18913901	3L_18913901_SNP [dm3] 3L_18920801_SNP [dm6]	T	G	2.650e^-4	0.87	SYNONYMOUS_CODING CG3819 UPSTREAM CG18223	TF binding site mE1_TFBS_cad
3R	27171995	3R_27171995_SNP [dm3] 3R_31346273_SNP [dm6]	T	C	2.653e^-4	0.87	INTRON CG34347
3L	18056895	3L_18056895_SNP [dm3] 3L_18063795_SNP [dm6]	C	A	2.658e^-4	0.87	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	13753012	2L_13753012_SNP [dm3] 2L_13753012_SNP [dm6]	T	C	2.659e^-4	0.87	INTRON CR44846 & 1 other
2L	5159125	2L_5159125_SNP [dm3] 2L_5159125_SNP [dm6]	A	T	2.665e^-4	0.87	NON_SYNONYMOUS_CODING Msp300 DOWNSTREAM Msp300 INTRON Msp300
3R	16767698	3R_16767698_SNP [dm3] 3R_20941976_SNP [dm6]	T	C	2.669e^-4	0.87	INTRON CG31191
2L	7451604	2L_7451604_DEL [dm3] 2L_7451604_DEL [dm6]	TAAAAATGAAATGAA...	T	2.671e^-4	0.87	UPSTREAM santa-maria DOWNSTREAM Gr28a INTERGENIC
2R	15322912	2R_15322912_SNP [dm3] 2R_19435407_SNP [dm6]	A	G	2.673e^-4	0.87	SYNONYMOUS_CODING Fak
3R	17740201	3R_17740201_SNP [dm3] 3R_21914479_SNP [dm6]	G	A	2.675e^-4	0.87	NON_SYNONYMOUS_CODING CG17843 DOWNSTREAM CG6690
3L	11170712	3L_11170712_SNP [dm3] 3L_11177612_SNP [dm6]	C	A	2.677e^-4	0.87	UTR_3_PRIME GlcAT-P DOWNSTREAM CG14142
3R	15178351	3R_15178351_SNP [dm3] 3R_19352629_SNP [dm6]	G	A	2.681e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2L	16442382	2L_16442382_DEL [dm3] 2L_16442382_DEL [dm6]	GTTG	C	2.682e^-4	0.87	INTRON CG5888
2L	6943120	2L_6943120_SNP [dm3] 2L_6943120_SNP [dm6]	A	C	2.682e^-4	0.87	UPSTREAM CG18304 DOWNSTREAM CG10158 INTERGENIC
X	8679939	X_8679939_SNP [dm3] X_8785906_SNP [dm6]	C	A	2.686e^-4	0.87	UPSTREAM Lim1 INTRON Lim1	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	3911042	3R_3911042_SNP [dm3] 3R_8085320_SNP [dm6]	G	A	2.689e^-4	0.87	NON_SYNONYMOUS_CODING mAChR-B	TF binding site mE1_TFBS_cad
2R	14886508	2R_14886508_SNP [dm3] 2R_18999003_SNP [dm6]	G	A	2.690e^-4	0.87	INTRON tn
3L	13594778	3L_13594778_SNP [dm3] 3L_13601678_SNP [dm6]	C	T	2.695e^-4	0.87	INTRON bru-3
X	16640660	X_16640660_DEL [dm3] X_16746627_DEL [dm6]	AA	A	2.697e^-4	0.87	UPSTREAM CG9634 INTRON CG9634
2L	7648531	2L_7648531_SNP [dm3] 2L_7648531_SNP [dm6]	C	G	2.701e^-4	0.87	INTRON Slob
3L	11174930	3L_11174930_SNP [dm3] 3L_11181830_SNP [dm6]	T	C	2.705e^-4	0.87	INTRON GlcAT-P
X	18147998	X_18147998_SNP [dm3] X_18253965_SNP [dm6]	G	A	2.721e^-4	0.87	INTERGENIC
3L	18254728	3L_18254728_SNP [dm3] 3L_18261628_SNP [dm6]	A	T	2.731e^-4	0.87	INTERGENIC
3R	23252579	3R_23252579_SNP [dm3] 3R_27426857_SNP [dm6]	T	A	2.733e^-4	0.87	INTRON side
3R	12289661	3R_12289661_SNP [dm3] 3R_16463939_SNP [dm6]	T	A	2.739e^-4	0.87	SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
3R	15961609	3R_15961609_SNP [dm3] 3R_20135887_SNP [dm6]	T	A	2.741e^-4	0.87	INTERGENIC
2R	6250756	2R_6250756_SNP [dm3] 2R_10363251_SNP [dm6]	A	C	2.750e^-4	0.87	INTRON CG42732 & 1 other
2R	20192354	2R_20192354_INS [dm3] 2R_24304831_INS [dm6]	C	CAC	2.754e^-4	0.87	INTERGENIC	regulatory region REDfly_CRMs
2R	13577815	2R_13577815_SNP [dm3] 2R_17690310_SNP [dm6]	A	G	2.754e^-4	0.87	UTR_3_PRIME HPS4 & 1 other
X	12814028	X_12814028_SNP [dm3] X_12919995_SNP [dm6]	T	C	2.756e^-4	0.87	INTRON fne
3R	3305986	3R_3305986_SNP [dm3] 3R_7480264_SNP [dm6]	G	T	2.759e^-4	0.87	INTERGENIC
3L	10265147	3L_10265147_SNP [dm3] 3L_10272047_SNP [dm6]	A	T	2.761e^-4	0.87	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA
3R	10147049	3R_10147049_SNP [dm3] 3R_14321327_SNP [dm6]	A	T	2.768e^-4	0.87	UTR_3_PRIME Afti DOWNSTREAM Afti & 1 other
2R	7640013	2R_7640013_SNP [dm3] 2R_11752508_SNP [dm6]	C	T	2.771e^-4	0.87	INTERGENIC
X	14512734	X_14512734_SNP [dm3] X_14618701_SNP [dm6]	C	T	2.773e^-4	0.87	INTRON NetA
2R	15138052	2R_15138052_SNP [dm3] 2R_19250547_SNP [dm6]	A	G	2.780e^-4	0.87	SYNONYMOUS_CODING wbl DOWNSTREAM CG33454	TF binding site BDTNP1_TFBS_z
3L	23845640	3L_23845640_SNP [dm3] 3L_23852540_SNP [dm6]	A	G	2.781e^-4	0.87	INTRON CG40470
3R	18466510	3R_18466510_SNP [dm3] 3R_22640788_SNP [dm6]	T	C	2.785e^-4	0.87	INTRON CG45058
2L	2180082	2L_2180082_SNP [dm3] 2L_2180082_SNP [dm6]	T	A	2.799e^-4	0.87	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	6641460	3R_6641460_SNP [dm3] 3R_10815738_SNP [dm6]	G	T	2.799e^-4	0.87	SYNONYMOUS_CODING CG4089 UPSTREAM CG14693	TF binding site mE1_TFBS_sens
2L	4272291	2L_4272291_SNP [dm3] 2L_4272291_SNP [dm6]	T	A	2.801e^-4	0.87	INTERGENIC
3L	10427497	3L_10427497_SNP [dm3] 3L_10434397_SNP [dm6]	G	T	2.806e^-4	0.87	UPSTREAM Ir67c INTERGENIC
2L	9946250	2L_9946250_SNP [dm3] 2L_9946250_SNP [dm6]	T	C	2.808e^-4	0.87	INTRON CG5853	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	13619727	2L_13619727_SNP [dm3] 2L_13619727_SNP [dm6]	G	C	2.808e^-4	0.87	INTRON kuz
X	5600187	X_5600187_SNP [dm3] X_5706154_SNP [dm6]	T	A	2.810e^-4	0.87	INTRON CG4096
X	8349637	X_8349637_SNP [dm3] X_8455604_SNP [dm6]	T	C	2.812e^-4	0.87	UPSTREAM org-1 INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15877642	3R_15877642_SNP [dm3] 3R_20051920_SNP [dm6]	A	G	2.813e^-4	0.87	INTRON CG17193	TF binding site BDTNP1_TFBS_twi
X	10124791	X_10124791_SNP [dm3] X_10230758_SNP [dm6]	A	G	2.817e^-4	0.87	DOWNSTREAM CG34408 & 1 other INTERGENIC
2L	12512255	2L_12512255_DEL [dm3] 2L_12512255_DEL [dm6]	AA	A	2.818e^-4	0.87	INTRON bun
3L	19263241	3L_19263241_DEL [dm3] 3L_19270141_DEL [dm6]	AG	A	2.825e^-4	0.87	FRAME_SHIFT CG14088 INTRON CG14085	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	8739383	2L_8739383_SNP [dm3] 2L_8739383_SNP [dm6]	C	T	2.834e^-4	0.87	INTRON raw
X	7682285	X_7682285_SNP [dm3] X_7788252_SNP [dm6]	G	T	2.841e^-4	0.87	INTERGENIC
X	18543686	X_18543686_SNP [dm3] X_18649653_SNP [dm6]	G	A	2.863e^-4	0.87	SYNONYMOUS_CODING CG6617 DOWNSTREAM CG6540	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo
3L	5506361	3L_5506361_SNP [dm3] 3L_5513261_SNP [dm6]	C	G	2.868e^-4	0.87	SYNONYMOUS_CODING Lkr
X	6933675	X_6933675_SNP [dm3] X_7039642_SNP [dm6]	G	A	2.874e^-4	0.87	UPSTREAM CG14427 INTRON CG12541	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3R	21385631	3R_21385631_SNP [dm3] 3R_25559909_SNP [dm6]	G	C	2.875e^-4	0.87	INTRON msi
2L	13395515	2L_13395515_SNP [dm3] 2L_13395515_SNP [dm6]	A	T	2.880e^-4	0.87	UTR_3_PRIME CG16957 UPSTREAM RpL24 DOWNSTREAM CG10859	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_ttk
3R	15288703	3R_15288703_SNP [dm3] 3R_19462981_SNP [dm6]	C	T	2.885e^-4	0.87	UTR_5_PRIME CG6255 UPSTREAM Dys INTRON Dys	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
X	2638246	X_2638246_SNP [dm3] X_2744213_SNP [dm6]	C	T	2.886e^-4	0.87	UPSTREAM Syx4 INTRON kirre	TF binding site BDTNP1_TFBS_dl
3L	16992579	3L_16992579_SNP [dm3] 3L_16999479_SNP [dm6]	G	A	2.894e^-4	0.87	SYNONYMOUS_CODING CG3764 UPSTREAM mir-2500	TF binding site mE1_TFBS_chinmo
3L	12424032	3L_12424032_SNP [dm3] 3L_12430932_SNP [dm6]	A	G	2.903e^-4	0.87	INTRON toe
X	7682299	X_7682299_SNP [dm3] X_7788266_SNP [dm6]	C	T	2.907e^-4	0.87	INTERGENIC
2L	11537794	2L_11537794_SNP [dm3] 2L_11537794_SNP [dm6]	A	G	2.918e^-4	0.87	DOWNSTREAM CG43438 INTERGENIC
3L	10935058	3L_10935058_SNP [dm3] 3L_10941958_SNP [dm6]	A	T	2.937e^-4	0.87	INTERGENIC
3R	4958573	3R_4958573_SNP [dm3] 3R_9132851_SNP [dm6]	G	T	2.940e^-4	0.87	INTRON pum
2R	4826541	2R_4826541_SNP [dm3] 2R_8939036_SNP [dm6]	A	C	2.940e^-4	0.87	SYNONYMOUS_CODING FANCI	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	15126645	2R_15126645_SNP [dm3] 2R_19239140_SNP [dm6]	A	G	2.943e^-4	0.87	NON_SYNONYMOUS_CODING cora INTRON cora	TF binding site mE1_TFBS_chinmo
3L	3670628	3L_3670628_SNP [dm3] 3L_3670628_SNP [dm6]	C	T	2.947e^-4	0.87	INTERGENIC
X	16653729	X_16653729_SNP [dm3] X_16759696_SNP [dm6]	A	G	2.948e^-4	0.87	INTRON if
3R	8656240	3R_8656240_INS [dm3] 3R_12830518_INS [dm6]	G	GGAGTG	2.950e^-4	0.87	INTERGENIC
3L	789141	3L_789141_SNP [dm3] 3L_789141_SNP [dm6]	G	A	2.951e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
2R	11792900	2R_11792900_INS [dm3] 2R_15905395_INS [dm6]	T	TGTTGT	2.951e^-4	0.87	INTRON sli	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	10535053	2L_10535053_SNP [dm3] 2L_10535053_SNP [dm6]	T	C	2.955e^-4	0.87	SYNONYMOUS_CODING CG18302
X	18023004	X_18023004_SNP [dm3] X_18128971_SNP [dm6]	G	A	2.960e^-4	0.87	DOWNSTREAM mir-210 & 1 other INTERGENIC
3R	12549548	3R_12549548_SNP [dm3] 3R_16723826_SNP [dm6]	T	G	2.960e^-4	0.87	INTRON Ubx	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	20207716	2R_20207716_SNP [dm3] 2R_24320193_SNP [dm6]	G	C	2.968e^-4	0.87	INTERGENIC
3R	20727485	3R_20727485_SNP [dm3] 3R_24901763_SNP [dm6]	A	T	2.977e^-4	0.87	NON_SYNONYMOUS_CODING CG10845 INTRON CG13643	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12126273	2L_12126273_SNP [dm3] 2L_12126273_SNP [dm6]	A	G	2.997e^-4	0.87	SYNONYMOUS_CODING CG17211
2L	8180503	2L_8180503_SNP [dm3] 2L_8180503_SNP [dm6]	A	G	2.999e^-4	0.87	SYNONYMOUS_CODING Piezo INTRON Piezo	TF binding site mE1_TFBS_cad
3R	21476020	3R_21476020_SNP [dm3] 3R_25650298_SNP [dm6]	G	A	3.008e^-4	0.87	UTR_3_PRIME jigr1 DOWNSTREAM jigr1	TF binding site mE1_TFBS_cad
2R	16579321	2R_16579321_SNP [dm3] 2R_20691816_SNP [dm6]	A	G	3.011e^-4	0.87	UPSTREAM CR44659 INTERGENIC
2L	10184864	2L_10184864_SNP [dm3] 2L_10184864_SNP [dm6]	A	T	3.014e^-4	0.87	NON_SYNONYMOUS_CODING Sur	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3L	805100	3L_805100_INS [dm3] 3L_805100_INS [dm6]	A	AC	3.016e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18063720	2L_18063720_SNP [dm3] 2L_18063720_SNP [dm6]	G	A	3.022e^-4	0.87	INTRON rdo
3L	10212571	3L_10212571_SNP [dm3] 3L_10219471_SNP [dm6]	A	C	3.026e^-4	0.87	NON_SYNONYMOUS_CODING CG32055
X	6687540	X_6687540_INS [dm3] X_6793507_INS [dm6]	A	AT	3.036e^-4	0.87	INTRON C3G
3R	12758955	3R_12758955_SNP [dm3] 3R_16933233_SNP [dm6]	C	G	3.041e^-4	0.87	UTR_5_PRIME Abd-B INTRON Abd-B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_Trl
2L	2181543	2L_2181543_SNP [dm3] 2L_2181543_SNP [dm6]	A	G	3.045e^-4	0.87	UPSTREAM CR43751 INTERGENIC	enhancer mE1_CBP_Enhancers regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	563676	2L_563676_SNP [dm3] 2L_563676_SNP [dm6]	C	T	3.046e^-4	0.87	UTR_5_PRIME CG11835 UPSTREAM CG2794 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	13754357	3R_13754357_SNP [dm3] 3R_17928635_SNP [dm6]	C	G	3.047e^-4	0.87	INTRON cpo	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	9111109	3L_9111109_SNP [dm3] 3L_9118009_SNP [dm6]	A	G	3.049e^-4	0.87	INTRON bol
3L	1653100	3L_1653100_SNP [dm3] 3L_1653100_SNP [dm6]	T	A	3.050e^-4	0.87	UPSTREAM CG7967 INTRON CG7970	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	19451791	X_19451791_SNP [dm3] X_19557758_SNP [dm6]	T	A	3.056e^-4	0.87	UPSTREAM mir-4966 & 1 other DOWNSTREAM mir-2499 INTERGENIC
3L	16922243	3L_16922243_SNP [dm3] 3L_16929143_SNP [dm6]	T	C	3.057e^-4	0.87	SYNONYMOUS_CODING CG11905 DOWNSTREAM CG11905	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	6208187	X_6208187_SNP [dm3] X_6314154_SNP [dm6]	G	T	3.065e^-4	0.87	INTRON CG15894
X	11369763	X_11369763_SNP [dm3] X_11475730_SNP [dm6]	T	C	3.078e^-4	0.87	INTRON CG43155
3R	21611865	3R_21611865_INS [dm3] 3R_25786143_INS [dm6]	A	AAA	3.079e^-4	0.87	DOWNSTREAM CG4960 INTERGENIC
3L	15236361	3L_15236361_SNP [dm3] 3L_15243261_SNP [dm6]	A	G	3.084e^-4	0.87	DOWNSTREAM Tollo INTERGENIC
3R	8401121	3R_8401121_SNP [dm3] 3R_12575399_SNP [dm6]	A	G	3.091e^-4	0.87	INTRON Octbeta2R
3L	13325166	3L_13325166_SNP [dm3] 3L_13332066_SNP [dm6]	T	C	3.095e^-4	0.87	INTERGENIC
3L	23845637	3L_23845637_SNP [dm3] 3L_23852537_SNP [dm6]	A	G	3.100e^-4	0.87	INTRON CG40470
2R	12319531	2R_12319531_SNP [dm3] 2R_16432026_SNP [dm6]	G	A	3.107e^-4	0.87	UPSTREAM CG4398 DOWNSTREAM Sema-2b INTERGENIC	TF binding site mE1_TFBS_HSA
2L	1312023	2L_1312023_SNP [dm3] 2L_1312023_SNP [dm6]	A	G	3.108e^-4	0.87	INTERGENIC	TF binding site mE1_TFBS_HSA
X	11369778	X_11369778_SNP [dm3] X_11475745_SNP [dm6]	C	G	3.109e^-4	0.87	INTRON CG43155
2L	17605849	2L_17605849_SNP [dm3] 2L_17605849_SNP [dm6]	A	T	3.114e^-4	0.87	DOWNSTREAM CR44412 INTERGENIC
2R	17415735	2R_17415735_SNP [dm3] 2R_21528230_SNP [dm6]	G	A	3.115e^-4	0.87	INTRON Egfr	TF binding site BDTNP1_TFBS_twi
X	5600363	X_5600363_SNP [dm3] X_5706330_SNP [dm6]	A	T	3.118e^-4	0.87	INTRON CG4096
3L	10268293	3L_10268293_SNP [dm3] 3L_10275193_SNP [dm6]	G	A	3.145e^-4	0.87	DOWNSTREAM Or67d INTERGENIC
3R	13473812	3R_13473812_SNP [dm3] 3R_17648090_SNP [dm6]	A	C	3.146e^-4	0.87	NON_SYNONYMOUS_CODING CG14322	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	18285902	2L_18285902_SNP [dm3] 2L_18285902_SNP [dm6]	T	C	3.149e^-4	0.87	UPSTREAM CG31787 INTERGENIC
X	11817563	X_11817563_SNP [dm3] X_11923530_SNP [dm6]	T	A	3.152e^-4	0.87	UPSTREAM Sclp INTRON Sclp
3L	13597912	3L_13597912_SNP [dm3] 3L_13604812_SNP [dm6]	T	C	3.157e^-4	0.87	INTRON bru-3
3L	16698256	3L_16698256_SNP [dm3] 3L_16705156_SNP [dm6]	C	T	3.164e^-4	0.87	NON_SYNONYMOUS_CODING CG9692 UTR_5_PRIME CG9692 INTRON Lasp & 1 other
3L	12976374	3L_12976374_SNP [dm3] 3L_12983274_SNP [dm6]	C	G	3.168e^-4	0.87	INTERGENIC
3L	3791040	3L_3791040_SNP [dm3] 3L_3791040_SNP [dm6]	G	T	3.168e^-4	0.87	INTRON CG32264 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	23845644	3L_23845644_SNP [dm3] 3L_23852544_SNP [dm6]	C	A	3.169e^-4	0.87	INTRON CG40470
3R	8942603	3R_8942603_SNP [dm3] 3R_13116881_SNP [dm6]	C	T	3.179e^-4	0.87	INTRON timeout
X	13561997	X_13561997_SNP [dm3] X_13667964_SNP [dm6]	A	T	3.188e^-4	0.87	UPSTREAM CG11164 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA
X	6192738	X_6192738_INS [dm3] X_6298705_INS [dm6]	T	TT	3.188e^-4	0.87	UTR_3_PRIME CG3815 DOWNSTREAM CG12219
3L	10607507	3L_10607507_SNP [dm3] 3L_10614407_SNP [dm6]	A	T	3.190e^-4	0.87	INTERGENIC
3R	15178502	3R_15178502_SNP [dm3] 3R_19352780_SNP [dm6]	T	A	3.195e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_Kr
3L	3589233	3L_3589233_DEL [dm3] 3L_3589233_DEL [dm6]	GTAAAAA	T	3.199e^-4	0.87	INTRON Eip63E
3R	11879683	3R_11879683_SNP [dm3] 3R_16053961_SNP [dm6]	G	A	3.204e^-4	0.87	NON_SYNONYMOUS_CODING msps	TF binding site BDTNP1_TFBS_bcd
2R	19890974	2R_19890974_SNP [dm3] 2R_24003451_SNP [dm6]	T	C	3.207e^-4	0.87	INTRON Unc-89	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	1491811	3L_1491811_SNP [dm3] 3L_1491811_SNP [dm6]	A	G	3.212e^-4	0.87	SYNONYMOUS_CODING CG12084	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	16143420	3L_16143420_SNP [dm3] 3L_16150320_SNP [dm6]	G	A	3.213e^-4	0.87	INTRON CG5151	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	16441937	2R_16441937_SNP [dm3] 2R_20554432_SNP [dm6]	T	C	3.232e^-4	0.87	INTERGENIC
3L	4886647	3L_4886647_SNP [dm3] 3L_4886647_SNP [dm6]	A	G	3.233e^-4	0.87	INTRON CG17150
3L	1520652	3L_1520652_SNP [dm3] 3L_1520652_SNP [dm6]	C	T	3.233e^-4	0.87	SYNONYMOUS_CODING Psa	TF binding site mE1_TFBS_cad
3L	11063912	3L_11063912_DEL [dm3] 3L_11070812_DEL [dm6]	AA	A	3.239e^-4	0.87	UTR_5_PRIME Mocs1 UPSTREAM CG6310
3L	5503514	3L_5503514_SNP [dm3] 3L_5510414_SNP [dm6]	C	A	3.241e^-4	0.87	NON_SYNONYMOUS_CODING CG34342
3L	16290634	3L_16290634_DEL [dm3] 3L_16297534_DEL [dm6]	CCTCC	C	3.241e^-4	0.87	INTERGENIC
3R	10977055	3R_10977055_SNP [dm3] 3R_15151333_SNP [dm6]	T	A	3.248e^-4	0.87	UPSTREAM Gyc88E INTRON Gyc88E
3R	11975162	3R_11975162_SNP [dm3] 3R_16149440_SNP [dm6]	G	T	3.252e^-4	0.87	UTR_3_PRIME CG5916 & 1 other DOWNSTREAM CG5916
X	16156274	X_16156274_SNP [dm3] X_16262241_SNP [dm6]	C	T	3.258e^-4	0.87	INTERGENIC
2L	9268304	2L_9268304_SNP [dm3] 2L_9268304_SNP [dm6]	T	C	3.269e^-4	0.87	INTRON Ggamma30A
X	12501582	X_12501582_INS [dm3] X_12607549_INS [dm6]	T	TGATTCGATTT...	3.277e^-4	0.87	UTR_3_PRIME Sec16 INTRON Sec16
2R	3972438	2R_3972438_DEL [dm3] 2R_8084933_DEL [dm6]	TGTATAAA	T	3.280e^-4	0.87	INTRON sut1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	14954846	2R_14954846_SNP [dm3] 2R_19067341_SNP [dm6]	C	T	3.289e^-4	0.87	UTR_5_PRIME 5-HT1A	TF binding site mE1_TFBS_Trl
2L	3147900	2L_3147900_DEL [dm3] 2L_3147900_DEL [dm6]	TC	T	3.302e^-4	0.87	INTRON Mad
2L	9373508	2L_9373508_SNP [dm3] 2L_9373508_SNP [dm6]	C	A	3.310e^-4	0.87	SYNONYMOUS_CODING Shawl EXON CR43865	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	18442628	3R_18442628_SNP [dm3] 3R_22616906_SNP [dm6]	C	T	3.319e^-4	0.87	SYNONYMOUS_CODING CG31161 DOWNSTREAM EF-G2
2R	13784163	2R_13784163_SNP [dm3] 2R_17896658_SNP [dm6]	C	T	3.334e^-4	0.87	INTRON Elk	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25530476	3R_25530476_SNP [dm3] 3R_29704754_SNP [dm6]	G	T	3.335e^-4	0.87	INTERGENIC
2L	12685339	2L_12685339_SNP [dm3] 2L_12685339_SNP [dm6]	C	T	3.337e^-4	0.87	SYNONYMOUS_CODING pdm2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	9914180	3L_9914180_SNP [dm3] 3L_9921080_SNP [dm6]	G	A	3.338e^-4	0.87	INTRON CG34356
2L	7451600	2L_7451600_DEL [dm3] 2L_7451600_DEL [dm6]	GA	G	3.339e^-4	0.87	UPSTREAM santa-maria DOWNSTREAM Gr28a INTERGENIC
2L	7451603	2L_7451603_SNP [dm3] 2L_7451603_SNP [dm6]	A	C	3.339e^-4	0.87	UPSTREAM santa-maria DOWNSTREAM Gr28a INTERGENIC
X	7682289	X_7682289_INS [dm3] X_7788256_INS [dm6]	C	CAGC	3.341e^-4	0.87	INTERGENIC
3R	5730245	3R_5730245_DEL [dm3] 3R_9904523_DEL [dm6]	AATTACA	A	3.344e^-4	0.87	INTRON Glut4EF
X	9224695	X_9224695_SNP [dm3] X_9330662_SNP [dm6]	A	G	3.353e^-4	0.87	UPSTREAM CG34450 DOWNSTREAM CG34449 INTRON CG34449
3R	15289720	3R_15289720_SNP [dm3] 3R_19463998_SNP [dm6]	T	A	3.365e^-4	0.87	UPSTREAM CG6255 INTRON Dys	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
2R	14809721	2R_14809721_SNP [dm3] 2R_18922216_SNP [dm6]	C	G	3.372e^-4	0.87	INTRON sano
3R	17004237	3R_17004237_DEL [dm3] 3R_21178515_DEL [dm6]	AGCA	A	3.373e^-4	0.87	INTRON SNF4Agamma	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	6309400	2L_6309400_SNP [dm3] 2L_6309400_SNP [dm6]	T	C	3.374e^-4	0.87	UTR_3_PRIME CG13984 UPSTREAM CG43922 INTRON Ddr	TF binding site mE1_TFBS_cad
3L	8505547	3L_8505547_DEL [dm3] 3L_8512447_DEL [dm6]	GTGGTAAAGGAGG...	G	3.374e^-4	0.87	CODON_DELETION CG6745 UPSTREAM CG6765	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	4868218	X_4868218_SNP [dm3] X_4974185_SNP [dm6]	G	A	3.378e^-4	0.87	INTRON CR44833
2L	21685471	2L_21685471_SNP [dm3] 2L_21685471_SNP [dm6]	A	T	3.379e^-4	0.87	INTRON CG31619	TF binding site mE1_TFBS_sens
2R	20225237	2R_20225237_SNP [dm3] 2R_24337714_SNP [dm6]	G	T	3.389e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2R	20206556	2R_20206556_SNP [dm3] 2R_24319033_SNP [dm6]	A	G	3.395e^-4	0.87	INTERGENIC
3L	22851989	3L_22851989_SNP [dm3] 3L_22858889_SNP [dm6]	A	T	3.401e^-4	0.87	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	2624503	2R_2624503_SNP [dm3] 2R_6736998_SNP [dm6]	C	T	3.402e^-4	0.87	INTRON l_2_01289
2L	19018310	2L_19018310_SNP [dm3] 2L_19018310_SNP [dm6]	A	G	3.405e^-4	0.87	INTERGENIC
3R	12290361	3R_12290361_SNP [dm3] 3R_16464639_SNP [dm6]	T	G	3.409e^-4	0.87	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	8413456	X_8413456_SNP [dm3] X_8519423_SNP [dm6]	T	C	3.418e^-4	0.87	INTRON Nrg	TF binding site mE1_TFBS_HSA
3L	9535171	3L_9535171_SNP [dm3] 3L_9542071_SNP [dm6]	T	A	3.429e^-4	0.87	DOWNSTREAM Ir67a INTERGENIC
2R	7111524	2R_7111524_SNP [dm3] 2R_11224019_SNP [dm6]	A	G	3.431e^-4	0.87	INTRON CG7737	TF binding site BDTNP1_TFBS_twi
3R	18108880	3R_18108880_SNP [dm3] 3R_22283158_SNP [dm6]	C	T	3.433e^-4	0.87	INTRON SKIP
3R	3227480	3R_3227480_SNP [dm3] 3R_7401758_SNP [dm6]	A	T	3.449e^-4	0.87	INTERGENIC
3L	7175083	3L_7175083_SNP [dm3] 3L_7181983_SNP [dm6]	T	G	3.452e^-4	0.87	INTRON Dscam2
2L	7842391	2L_7842391_INS [dm3] 2L_7842391_INS [dm6]	G	GAAG	3.454e^-4	0.87	INTERGENIC
3L	1940692	3L_1940692_DEL [dm3] 3L_1940692_DEL [dm6]	AGAACATTTTCCTTTT...	A	3.454e^-4	0.87	UPSTREAM Mfap1 & 1 other INTERGENIC	TF binding site mE1_TFBS_D mE1_TFBS_HSA
3L	10214792	3L_10214792_SNP [dm3] 3L_10221692_SNP [dm6]	G	A	3.463e^-4	0.87	SYNONYMOUS_CODING scramb1	TF binding site mE1_TFBS_cad
X	16501341	X_16501341_SNP [dm3] X_16607308_SNP [dm6]	C	T	3.476e^-4	0.87	INTRON Nup153	TF binding site BDTNP1_TFBS_dl
3L	10266229	3L_10266229_SNP [dm3] 3L_10273129_SNP [dm6]	T	C	3.476e^-4	0.87	UPSTREAM Or67d INTERGENIC	regulatory region REDfly_CRMs
X	2638285	X_2638285_SNP [dm3] X_2744252_SNP [dm6]	G	A	3.477e^-4	0.87	UPSTREAM Syx4 INTRON kirre	TF binding site BDTNP1_TFBS_dl
2R	8492300	2R_8492300_SNP [dm3] 2R_12604795_SNP [dm6]	C	T	3.478e^-4	0.87	INTRON Amph
2R	16275470	2R_16275470_SNP [dm3] 2R_20387965_SNP [dm6]	T	C	3.486e^-4	0.87	INTERGENIC
3R	13932292	3R_13932292_SNP [dm3] 3R_18106570_SNP [dm6]	C	G	3.488e^-4	0.87	INTRON sr
3L	14084673	3L_14084673_SNP [dm3] 3L_14091573_SNP [dm6]	C	T	3.495e^-4	0.87	INTERGENIC
2L	7615459	2L_7615459_SNP [dm3] 2L_7615459_SNP [dm6]	T	C	3.497e^-4	0.87	INTRON CG6739
X	13561854	X_13561854_SNP [dm3] X_13667821_SNP [dm6]	C	T	3.503e^-4	0.87	UPSTREAM CG11164 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3L	4959365	3L_4959365_SNP [dm3] 3L_4959365_SNP [dm6]	A	G	3.503e^-4	0.87	INTRON Con	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
X	5323608	X_5323608_SNP [dm3] X_5429575_SNP [dm6]	C	T	3.512e^-4	0.87	UTR_5_PRIME CG15784 UPSTREAM CG15784 DOWNSTREAM CR45517
3R	15288681	3R_15288681_SNP [dm3] 3R_19462959_SNP [dm6]	T	A	3.514e^-4	0.87	SYNONYMOUS_CODING CG6255 UPSTREAM Dys INTRON Dys	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3R	15178607	3R_15178607_SNP [dm3] 3R_19352885_SNP [dm6]	G	T	3.514e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_Kr
3L	12874984	3L_12874984_SNP [dm3] 3L_12881884_SNP [dm6]	A	G	3.520e^-4	0.87	INTERGENIC
3R	3262672	3R_3262672_SNP [dm3] 3R_7436950_SNP [dm6]	G	T	3.526e^-4	0.87	INTERGENIC
X	16315683	X_16315683_SNP [dm3] X_16421650_SNP [dm6]	G	T	3.527e^-4	0.87	INTRON AnxB11	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_zfh1
3R	20788454	3R_20788454_SNP [dm3] 3R_24962732_SNP [dm6]	T	A	3.531e^-4	0.87	INTERGENIC
3R	9401217	3R_9401217_SNP [dm3] 3R_13575495_SNP [dm6]	A	T	3.537e^-4	0.87	DOWNSTREAM CR43848 INTERGENIC
2R	2725144	2R_2725144_SNP [dm3] 2R_6837639_SNP [dm6]	T	G	3.537e^-4	0.87	UTR_3_PRIME CG15236 DOWNSTREAM CG9445
3R	6646050	3R_6646050_SNP [dm3] 3R_10820328_SNP [dm6]	C	G	3.540e^-4	0.87	INTERGENIC
3R	11026701	3R_11026701_SNP [dm3] 3R_15200979_SNP [dm6]	C	T	3.542e^-4	0.87	SYNONYMOUS_CODING CG42542 INTRON CG42542
X	18054264	X_18054264_SNP [dm3] X_18160231_SNP [dm6]	C	T	3.548e^-4	0.87	INTRON Frq1
3L	16131152	3L_16131152_SNP [dm3] 3L_16138052_SNP [dm6]	T	C	3.559e^-4	0.87	UTR_3_PRIME CG5151 UPSTREAM CG5157
X	12813985	X_12813985_SNP [dm3] X_12919952_SNP [dm6]	T	G	3.563e^-4	0.87	INTRON fne
2L	9770873	2L_9770873_SNP [dm3] 2L_9770873_SNP [dm6]	T	A	3.567e^-4	0.87	DOWNSTREAM ppk16 & 1 other INTRON ppk18
2L	8956774	2L_8956774_SNP [dm3] 2L_8956774_SNP [dm6]	T	A	3.569e^-4	0.87	UPSTREAM CG31886 INTRON CG31886	TF binding site BDTNP1_TFBS_twi mE1_TFBS_zfh1
3L	5500740	3L_5500740_SNP [dm3] 3L_5507640_SNP [dm6]	G	T	3.569e^-4	0.87	INTRON CG34342
3L	10955927	3L_10955927_SNP [dm3] 3L_10962827_SNP [dm6]	A	T	3.571e^-4	0.87	DOWNSTREAM CR45249 INTERGENIC
2L	6426608	2L_6426608_SNP [dm3] 2L_6426608_SNP [dm6]	A	T	3.576e^-4	0.87	DOWNSTREAM CG9527 & 1 other INTERGENIC	TF binding site mE1_TFBS_zfh1
2R	7640008	2R_7640008_SNP [dm3] 2R_11752503_SNP [dm6]	G	A	3.580e^-4	0.87	INTERGENIC
3L	18118886	3L_18118886_SNP [dm3] 3L_18125786_SNP [dm6]	A	G	3.584e^-4	0.87	INTERGENIC
2R	16076273	2R_16076273_INS [dm3] 2R_20188768_INS [dm6]	A	ACATA	3.592e^-4	0.87	INTERGENIC
2L	8540487	2L_8540487_SNP [dm3] 2L_8540487_SNP [dm6]	A	G	3.600e^-4	0.87	NON_SYNONYMOUS_CODING CG17834
X	10707079	X_10707079_SNP [dm3] X_10813046_SNP [dm6]	A	C	3.603e^-4	0.87	INTRON Imp
3L	3815808	3L_3815808_SNP [dm3] 3L_3815808_SNP [dm6]	G	C	3.603e^-4	0.87	UPSTREAM CR43932 & 1 other DOWNSTREAM Acp63F INTRON Scsalpha
3L	13083154	3L_13083154_SNP [dm3] 3L_13090054_SNP [dm6]	T	A	3.606e^-4	0.87	UPSTREAM CG11251 INTERGENIC	TF binding site BDTNP1_TFBS_sna mE1_TFBS_HSA
2R	9007117	2R_9007117_SNP [dm3] 2R_13119612_SNP [dm6]	G	T	3.607e^-4	0.87	INTRON CG13325
3R	8401138	3R_8401138_SNP [dm3] 3R_12575416_SNP [dm6]	T	A	3.613e^-4	0.87	INTRON Octbeta2R
X	16010320	X_16010320_SNP [dm3] X_16116287_SNP [dm6]	A	C	3.620e^-4	0.87	INTERGENIC
X	12662763	X_12662763_SNP [dm3] X_12768730_SNP [dm6]	C	T	3.630e^-4	0.87	INTRON CG3812
2R	13868391	2R_13868391_SNP [dm3] 2R_17980886_SNP [dm6]	C	T	3.644e^-4	0.87	INTRON dpr13
2R	15323078	2R_15323078_SNP [dm3] 2R_19435573_SNP [dm6]	T	G	3.644e^-4	0.87	INTRON Fak
2R	12319730	2R_12319730_SNP [dm3] 2R_16432225_SNP [dm6]	C	T	3.653e^-4	0.87	UPSTREAM CG4398 DOWNSTREAM Sema-2b INTERGENIC
3R	24917755	3R_24917755_SNP [dm3] 3R_29092033_SNP [dm6]	T	A	3.654e^-4	0.87	INTRON CG11873	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	12290838	3R_12290838_SNP [dm3] 3R_16465116_SNP [dm6]	A	G	3.656e^-4	0.87	NON_SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	20963616	X_20963616_SNP [dm3] X_21092589_SNP [dm6]	T	A	3.658e^-4	0.87	INTERGENIC
X	6933730	X_6933730_SNP [dm3] X_7039697_SNP [dm6]	T	C	3.663e^-4	0.87	UPSTREAM CG14427 INTRON CG12541	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	15073118	3L_15073118_SNP [dm3] 3L_15080018_SNP [dm6]	G	A	3.670e^-4	0.87	UPSTREAM cp309 INTRON cp309	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	6166208	2L_6166208_SNP [dm3] 2L_6166208_SNP [dm6]	C	A	3.674e^-4	0.87	INTERGENIC
3R	10985558	3R_10985558_SNP [dm3] 3R_15159836_SNP [dm6]	C	T	3.679e^-4	0.87	INTRON Gyc88E
2L	3114878	2L_3114878_INS [dm3] 2L_3114878_INS [dm6]	C	CCAT	3.684e^-4	0.87	INTRON toc
2L	3384412	2L_3384412_SNP [dm3] 2L_3384412_SNP [dm6]	G	T	3.688e^-4	0.87	INTERGENIC
X	20561610	X_20561610_SNP [dm3] X_20690583_SNP [dm6]	T	C	3.690e^-4	0.87	UPSTREAM run EXON CR45610	regulatory region FlyBase REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
3R	5714750	3R_5714750_SNP [dm3] 3R_9889028_SNP [dm6]	A	G	3.691e^-4	0.87	INTRON Glut4EF
2L	7841450	2L_7841450_SNP [dm3] 2L_7841450_SNP [dm6]	A	G	3.695e^-4	0.87	DOWNSTREAM CG14537 INTERGENIC
3R	11976149	3R_11976149_SNP [dm3] 3R_16150427_SNP [dm6]	G	C	3.708e^-4	0.87	NON_SYNONYMOUS_CODING Fer2 DOWNSTREAM CG5916
X	7433303	X_7433303_SNP [dm3] X_7539270_SNP [dm6]	T	A	3.715e^-4	0.87	INTRON CG32719
X	18150805	X_18150805_INS [dm3] X_18256772_INS [dm6]	T	TCT	3.721e^-4	0.87	EXON CR45613
3L	3579495	3L_3579495_SNP [dm3] 3L_3579495_SNP [dm6]	A	G	3.725e^-4	0.87	INTRON Eip63E
2L	5416518	2L_5416518_SNP [dm3] 2L_5416518_SNP [dm6]	A	G	3.729e^-4	0.87	UTR_3_PRIME H15 DOWNSTREAM H15	TF binding site mE1_TFBS_Kr
X	18775411	X_18775411_SNP [dm3] X_18881378_SNP [dm6]	T	C	3.731e^-4	0.87	UTR_3_PRIME CG34401 DOWNSTREAM CG34401
X	3248540	X_3248540_SNP [dm3] X_3354507_SNP [dm6]	C	G	3.738e^-4	0.87	INTERGENIC
2R	14886461	2R_14886461_SNP [dm3] 2R_18998956_SNP [dm6]	C	A	3.738e^-4	0.87	INTRON tn
X	15644795	X_15644795_SNP [dm3] X_15750762_SNP [dm6]	T	C	3.743e^-4	0.87	SYNONYMOUS_CODING CG8239 DOWNSTREAM Graf	TF binding site mE1_TFBS_cad
3R	9788682	3R_9788682_SNP [dm3] 3R_13962960_SNP [dm6]	G	T	3.744e^-4	0.87	SYNONYMOUS_CODING CG9925	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	12842672	2L_12842672_SNP [dm3] 2L_12842672_SNP [dm6]	A	G	3.747e^-4	0.87	DOWNSTREAM CR44971 INTERGENIC
3R	12492065	3R_12492065_SNP [dm3] 3R_16666343_SNP [dm6]	C	A	3.749e^-4	0.87	INTRON Ubx
X	8988504	X_8988504_SNP [dm3] X_9094471_SNP [dm6]	G	T	3.750e^-4	0.87	NON_SYNONYMOUS_CODING CG7766	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	16542172	2R_16542172_SNP [dm3] 2R_20654667_SNP [dm6]	G	A	3.753e^-4	0.87	INTRON Lrt & 1 other
X	4707616	X_4707616_SNP [dm3] X_4813583_SNP [dm6]	C	G	3.754e^-4	0.87	INTERGENIC
3R	18162612	3R_18162612_SNP [dm3] 3R_22336890_SNP [dm6]	C	A	3.754e^-4	0.87	DOWNSTREAM CG5388 INTRON CG5388
X	13690921	X_13690921_SNP [dm3] X_13796888_SNP [dm6]	G	A	3.754e^-4	0.87	SYNONYMOUS_CODING CG10996 INTRON inaE
2L	12478331	2L_12478331_SNP [dm3] 2L_12478331_SNP [dm6]	C	T	3.757e^-4	0.87	INTRON bun	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	7640149	2R_7640149_SNP [dm3] 2R_11752644_SNP [dm6]	C	A	3.763e^-4	0.87	INTERGENIC
3L	4417014	3L_4417014_SNP [dm3] 3L_4417014_SNP [dm6]	T	G	3.768e^-4	0.87	INTRON DOR
3L	11003618	3L_11003618_SNP [dm3] 3L_11010518_SNP [dm6]	G	T	3.774e^-4	0.87	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_zfh1
X	16151536	X_16151536_DEL [dm3] X_16257503_DEL [dm6]	CATAATGCAAACGC...	C	3.775e^-4	0.87	INTERGENIC
3L	4417095	3L_4417095_SNP [dm3] 3L_4417095_SNP [dm6]	C	T	3.781e^-4	0.87	INTRON DOR
3R	11859175	3R_11859175_SNP [dm3] 3R_16033453_SNP [dm6]	A	T	3.786e^-4	0.87	INTRON pnr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
X	8059622	X_8059622_SNP [dm3] X_8165589_SNP [dm6]	C	G	3.794e^-4	0.87	SYNONYMOUS_CODING Or7a DOWNSTREAM CG2278
3R	15761515	3R_15761515_SNP [dm3] 3R_19935793_SNP [dm6]	T	G	3.795e^-4	0.87	UPSTREAM mira INTRON Hs6st	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2R	20208832	2R_20208832_SNP [dm3] 2R_24321309_SNP [dm6]	T	C	3.795e^-4	0.87	INTERGENIC
3R	13932208	3R_13932208_SNP [dm3] 3R_18106486_SNP [dm6]	G	A	3.804e^-4	0.87	INTRON sr
2L	21685670	2L_21685670_SNP [dm3] 2L_21685670_SNP [dm6]	G	A	3.813e^-4	0.87	INTRON CG31619
3R	20727415	3R_20727415_SNP [dm3] 3R_24901693_SNP [dm6]	G	A	3.814e^-4	0.87	SYNONYMOUS_CODING CG10845 INTRON CG13643	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	17687398	3R_17687398_SNP [dm3] 3R_21861676_SNP [dm6]	T	A	3.820e^-4	0.87	UPSTREAM CR45644 EXON CR45645	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	2828551	3L_2828551_SNP [dm3] 3L_2828551_SNP [dm6]	T	C	3.838e^-4	0.87	INTRON CG43444
2R	12548315	2R_12548315_SNP [dm3] 2R_16660810_SNP [dm6]	C	T	3.839e^-4	0.87	INTRON Picot
3L	18058267	3L_18058267_SNP [dm3] 3L_18065167_SNP [dm6]	T	C	3.841e^-4	0.87	UPSTREAM Eip75B INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3L	762395	3L_762395_SNP [dm3] 3L_762395_SNP [dm6]	A	G	3.851e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
2R	11691471	2R_11691471_SNP [dm3] 2R_15803966_SNP [dm6]	A	C	3.852e^-4	0.87	INTRON tun & 1 other
3R	15278255	3R_15278255_SNP [dm3] 3R_19452533_SNP [dm6]	G	A	3.857e^-4	0.87	INTRON CG31221	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr
3L	5503789	3L_5503789_SNP [dm3] 3L_5510689_SNP [dm6]	T	G	3.860e^-4	0.87	INTRON CG34342
3L	8804181	3L_8804181_SNP [dm3] 3L_8811081_SNP [dm6]	T	C	3.866e^-4	0.87	SYNONYMOUS_CODING CG13309	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	9814313	3R_9814313_SNP [dm3] 3R_13988591_SNP [dm6]	A	T	3.867e^-4	0.87	INTRON rdx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3L	2882282	3L_2882282_SNP [dm3] 3L_2882282_SNP [dm6]	A	C	3.879e^-4	0.87	UPSTREAM CR44531 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Trl
2R	2624625	2R_2624625_SNP [dm3] 2R_6737120_SNP [dm6]	C	T	3.885e^-4	0.87	INTRON l_2_01289
3L	8536317	3L_8536317_SNP [dm3] 3L_8543217_SNP [dm6]	A	T	3.894e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	19391238	3L_19391238_SNP [dm3] 3L_19398138_SNP [dm6]	T	C	3.903e^-4	0.87	INTRON CG32206
2R	13768969	2R_13768969_SNP [dm3] 2R_17881464_SNP [dm6]	A	G	3.906e^-4	0.87	NON_SYNONYMOUS_CODING CG30110 INTRON Elk
3L	13936409	3L_13936409_SNP [dm3] 3L_13943309_SNP [dm6]	G	A	3.913e^-4	0.87	INTRON CG32137
X	18070916	X_18070916_SNP [dm3] X_18176883_SNP [dm6]	T	A	3.914e^-4	0.87	UPSTREAM Frq2 INTERGENIC
X	13725177	X_13725177_DEL [dm3] X_13831144_DEL [dm6]	GCA	C	3.919e^-4	0.87	UPSTREAM jub INTRON AMPdeam	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	12654830	2L_12654830_DEL [dm3] 2L_12654830_DEL [dm6]	GA	G	3.924e^-4	0.87	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	13113491	3L_13113491_SNP [dm3] 3L_13120391_SNP [dm6]	A	C	3.932e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
2L	6378291	2L_6378291_SNP [dm3] 2L_6378291_SNP [dm6]	A	G	3.943e^-4	0.87	UTR_3_PRIME CG42368
3L	15751996	3L_15751996_SNP [dm3] 3L_15758896_SNP [dm6]	A	G	3.945e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
3L	13403354	3L_13403354_SNP [dm3] 3L_13410254_SNP [dm6]	A	T	3.950e^-4	0.87	DOWNSTREAM CG10222 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	17574456	3L_17574456_SNP [dm3] 3L_17581356_SNP [dm6]	C	G	3.957e^-4	0.87	INTRON Eip74EF
2R	17464674	2R_17464674_SNP [dm3] 2R_21577169_SNP [dm6]	T	C	3.967e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5685238	3R_5685238_SNP [dm3] 3R_9859516_SNP [dm6]	C	A	3.970e^-4	0.87	INTRON Teh1
2R	3891512	2R_3891512_SNP [dm3] 2R_8004007_SNP [dm6]	C	G	3.975e^-4	0.87	UPSTREAM Odc1 INTERGENIC
X	7001045	X_7001045_SNP [dm3] X_7107012_SNP [dm6]	A	G	3.976e^-4	0.87	UTR_3_PRIME fz4 DOWNSTREAM CG8300
X	4868212	X_4868212_SNP [dm3] X_4974179_SNP [dm6]	C	T	3.977e^-4	0.87	INTRON CR44833
3L	5487987	3L_5487987_SNP [dm3] 3L_5494887_SNP [dm6]	C	G	3.980e^-4	0.87	UPSTREAM CR44520 INTERGENIC
2R	4730354	2R_4730354_SNP [dm3] 2R_8842849_SNP [dm6]	C	T	3.983e^-4	0.87	INTRON sns	TF binding site mE1_TFBS_chinmo
2R	17342725	2R_17342725_SNP [dm3] 2R_21455220_SNP [dm6]	G	A	3.986e^-4	0.87	INTRON Sdc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	12478562	2L_12478562_SNP [dm3] 2L_12478562_SNP [dm6]	G	A	3.986e^-4	0.87	INTRON bun	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	16754089	3R_16754089_SNP [dm3] 3R_20928367_SNP [dm6]	C	G	3.988e^-4	0.87	UTR_3_PRIME hdly DOWNSTREAM hdly INTRON CG31191 & 1 other	TF binding site mE1_TFBS_inv
3R	25790697	3R_25790697_SNP [dm3] 3R_29964975_SNP [dm6]	C	A	3.996e^-4	0.87	INTRON TkR99D
3R	12747534	3R_12747534_SNP [dm3] 3R_16921812_SNP [dm6]	G	T	4.019e^-4	0.87	INTRON iab-8	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	12512289	2L_12512289_SNP [dm3] 2L_12512289_SNP [dm6]	A	T	4.022e^-4	0.87	INTRON bun
2R	19490732	2R_19490732_SNP [dm3] 2R_23603209_SNP [dm6]	A	T	4.022e^-4	0.87	SYNONYMOUS_CODING CG5398 UPSTREAM CG43209 DOWNSTREAM CG17664	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15289623	3R_15289623_SNP [dm3] 3R_19463901_SNP [dm6]	T	A	4.031e^-4	0.87	UPSTREAM CG6255 INTRON Dys	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
3R	3305963	3R_3305963_SNP [dm3] 3R_7480241_SNP [dm6]	G	A	4.034e^-4	0.87	INTERGENIC
2R	3972446	2R_3972446_INS [dm3] 2R_8084941_INS [dm6]	C	CATTCATTT	4.038e^-4	0.87	INTRON sut1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	10506461	3L_10506461_SNP [dm3] 3L_10513361_SNP [dm6]	T	A	4.045e^-4	0.87	INTRON A2bp1
2R	18537881	2R_18537881_SNP [dm3] 2R_22650376_SNP [dm6]	A	G	4.047e^-4	0.87	UPSTREAM nsr & 1 other INTERGENIC	transposable element FlyBase
2R	8890861	2R_8890861_SNP [dm3] 2R_13003356_SNP [dm6]	A	C	4.048e^-4	0.87	SYNONYMOUS_CODING Su_z_2	TF binding site mE1_TFBS_chinmo
2L	12803570	2L_12803570_SNP [dm3] 2L_12803570_SNP [dm6]	G	A	4.059e^-4	0.87	INTERGENIC
X	5305150	X_5305150_SNP [dm3] X_5411117_SNP [dm6]	C	G	4.061e^-4	0.87	UPSTREAM NAAT1 INTERGENIC
X	8856731	X_8856731_DEL [dm3] X_8962698_DEL [dm6]	TGAATGCGATT...	T	4.068e^-4	0.87	INTRON rdgA
3R	9401196	3R_9401196_SNP [dm3] 3R_13575474_SNP [dm6]	T	C	4.069e^-4	0.87	EXON CR43848
3R	11861040	3R_11861040_SNP [dm3] 3R_16035318_SNP [dm6]	C	A	4.069e^-4	0.87	INTRON pnr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
X	5305132	X_5305132_SNP [dm3] X_5411099_SNP [dm6]	G	A	4.072e^-4	0.87	UPSTREAM NAAT1 INTERGENIC
2L	12664763	2L_12664763_SNP [dm3] 2L_12664763_SNP [dm6]	A	T	4.077e^-4	0.87	INTRON pdm2
3R	12297397	3R_12297397_SNP [dm3] 3R_16471675_SNP [dm6]	G	C	4.078e^-4	0.87	UPSTREAM Gyc-89Da DOWNSTREAM CSN5 INTERGENIC
2R	7820765	2R_7820765_SNP [dm3] 2R_11933260_SNP [dm6]	C	T	4.084e^-4	0.87	INTERGENIC
2L	7648414	2L_7648414_SNP [dm3] 2L_7648414_SNP [dm6]	T	A	4.085e^-4	0.87	INTRON Slob
2L	3438463	2L_3438463_SNP [dm3] 2L_3438463_SNP [dm6]	T	A	4.087e^-4	0.87	INTERGENIC
3L	4325453	3L_4325453_SNP [dm3] 3L_4325453_SNP [dm6]	T	A	4.092e^-4	0.87	INTRON Cip4
3R	11908617	3R_11908617_SNP [dm3] 3R_16082895_SNP [dm6]	G	A	4.103e^-4	0.87	NON_SYNONYMOUS_CODING Mhcl UPSTREAM sxe2 INTRON Mhcl
3L	16964091	3L_16964091_SNP [dm3] 3L_16970991_SNP [dm6]	C	T	4.118e^-4	0.87	INTRON Exn
3L	13402747	3L_13402747_SNP [dm3] 3L_13409647_SNP [dm6]	C	T	4.128e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	14809887	2R_14809887_SNP [dm3] 2R_18922382_SNP [dm6]	A	G	4.131e^-4	0.87	INTRON sano	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	16137900	3L_16137900_SNP [dm3] 3L_16144800_SNP [dm6]	A	T	4.134e^-4	0.87	UPSTREAM CG32152 & 1 other INTRON CG5151
3R	16509740	3R_16509740_INS [dm3] 3R_20684018_INS [dm6]	T	TCGCC	4.135e^-4	0.87	INTERGENIC
3L	12381199	3L_12381199_SNP [dm3] 3L_12388099_SNP [dm6]	C	A	4.139e^-4	0.87	UPSTREAM Ncc69 INTRON Ncc69
3R	12110187	3R_12110187_DEL [dm3] 3R_16284465_DEL [dm6]	GG	G	4.152e^-4	0.87	INTRON gish	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	16154555	3L_16154555_SNP [dm3] 3L_16161455_SNP [dm6]	T	A	4.160e^-4	0.87	INTRON CG5151	TF binding site mE1_TFBS_HSA
2R	4483521	2R_4483521_DEL [dm3] 2R_8596016_DEL [dm6]	CATGTATGTAGTCTGTACAA...	T	4.175e^-4	0.87	DOWNSTREAM CG8735 INTERGENIC
2L	12723146	2L_12723146_SNP [dm3] 2L_12723146_SNP [dm6]	A	G	4.177e^-4	0.87	SYNONYMOUS_CODING MRP	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens
3R	10376238	3R_10376238_SNP [dm3] 3R_14550516_SNP [dm6]	A	C	4.184e^-4	0.87	INTRON Pde6
3R	27171996	3R_27171996_SNP [dm3] 3R_31346274_SNP [dm6]	A	G	4.186e^-4	0.87	INTRON CG34347
3L	5500759	3L_5500759_SNP [dm3] 3L_5507659_SNP [dm6]	A	G	4.195e^-4	0.87	INTRON CG34342
2R	16524082	2R_16524082_SNP [dm3] 2R_20636577_SNP [dm6]	T	C	4.206e^-4	0.87	SYNONYMOUS_CODING CG13436 INTRON rig
3R	25237241	3R_25237241_SNP [dm3] 3R_29411519_SNP [dm6]	A	T	4.213e^-4	0.87	INTRON Ptp99A
2L	9767929	2L_9767929_SNP [dm3] 2L_9767929_SNP [dm6]	G	A	4.213e^-4	0.87	SYNONYMOUS_CODING CG4017 INTRON ppk18
3R	8942076	3R_8942076_SNP [dm3] 3R_13116354_SNP [dm6]	C	T	4.217e^-4	0.87	INTRON timeout
2R	4405543	2R_4405543_SNP [dm3] 2R_8518038_SNP [dm6]	G	A	4.217e^-4	0.87	INTRON mtt
3R	24794436	3R_24794436_SNP [dm3] 3R_28968714_SNP [dm6]	A	G	4.222e^-4	0.87	INTRON CG14521
2R	13766091	2R_13766091_SNP [dm3] 2R_17878586_SNP [dm6]	G	T	4.225e^-4	0.87	SYNONYMOUS_CODING CG30325 INTRON Elk
3R	16509727	3R_16509727_DEL [dm3] 3R_20684005_DEL [dm6]	GATGTATACCTAC...	G	4.229e^-4	0.87	INTERGENIC
X	8856216	X_8856216_SNP [dm3] X_8962183_SNP [dm6]	A	G	4.253e^-4	0.87	INTRON rdgA
3L	9997817	3L_9997817_SNP [dm3] 3L_10004717_SNP [dm6]	G	T	4.259e^-4	0.87	INTRON dpr6
3L	17478170	3L_17478170_SNP [dm3] 3L_17485070_SNP [dm6]	T	G	4.275e^-4	0.87	INTRON CG6333
X	17835331	X_17835331_SNP [dm3] X_17941298_SNP [dm6]	T	C	4.276e^-4	0.87	INTRON Sh	TF binding site BDTNP1_TFBS_dl
2L	13395558	2L_13395558_SNP [dm3] 2L_13395558_SNP [dm6]	A	C	4.280e^-4	0.87	NON_SYNONYMOUS_CODING CG16957 UPSTREAM RpL24 DOWNSTREAM CG10859	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_ttk
2R	9149317	2R_9149317_SNP [dm3] 2R_13261812_SNP [dm6]	G	C	4.283e^-4	0.87	UPSTREAM CG42319 INTRON CG42319
3L	13276944	3L_13276944_SNP [dm3] 3L_13283844_SNP [dm6]	A	G	4.287e^-4	0.87	DOWNSTREAM CR43146 EXON CR43913
3L	3670619	3L_3670619_SNP [dm3] 3L_3670619_SNP [dm6]	G	A	4.287e^-4	0.87	INTERGENIC
3R	11893989	3R_11893989_SNP [dm3] 3R_16068267_SNP [dm6]	A	C	4.299e^-4	0.87	UPSTREAM CG10185 DOWNSTREAM Mhcl INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	15875920	3R_15875920_SNP [dm3] 3R_20050198_SNP [dm6]	C	T	4.304e^-4	0.87	INTRON CG17193
2L	19194417	2L_19194417_SNP [dm3] 2L_19194417_SNP [dm6]	C	G	4.305e^-4	0.87	INTRON drl	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
3L	1200024	3L_1200024_SNP [dm3] 3L_1200024_SNP [dm6]	G	T	4.305e^-4	0.87	UPSTREAM mwh DOWNSTREAM Aplip1 INTERGENIC
2L	8826308	2L_8826308_SNP [dm3] 2L_8826308_SNP [dm6]	G	A	4.307e^-4	0.87	UTR_5_PRIME SoxN	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2L	1862418	2L_1862418_SNP [dm3] 2L_1862418_SNP [dm6]	G	A	4.320e^-4	0.87	INTRON CG31663
3R	9401175	3R_9401175_SNP [dm3] 3R_13575453_SNP [dm6]	C	T	4.331e^-4	0.87	EXON CR43848
X	19132706	X_19132706_SNP [dm3] X_19238673_SNP [dm6]	A	T	4.332e^-4	0.87	INTRON CG14196
X	3419862	X_3419862_SNP [dm3] X_3525829_SNP [dm6]	G	A	4.334e^-4	0.87	INTRON CG32791
2L	12683994	2L_12683994_SNP [dm3] 2L_12683994_SNP [dm6]	T	C	4.341e^-4	0.87	INTRON pdm2	TF binding site mE1_TFBS_sbb
2L	1976083	2L_1976083_SNP [dm3] 2L_1976083_SNP [dm6]	T	A	4.342e^-4	0.87	UTR_3_PRIME CG15356 DOWNSTREAM Der-1	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
3L	10265856	3L_10265856_SNP [dm3] 3L_10272756_SNP [dm6]	C	A	4.344e^-4	0.87	UPSTREAM Or67d INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
2R	15525647	2R_15525647_SNP [dm3] 2R_19638142_SNP [dm6]	T	C	4.351e^-4	0.87	DOWNSTREAM CG18367 & 2 others INTERGENIC
X	8150036	X_8150036_DEL [dm3] X_8256003_DEL [dm6]	ACTGTTGTAA	A	4.351e^-4	0.87	INTRON CG1632
X	18633041	X_18633041_SNP [dm3] X_18739008_SNP [dm6]	T	G	4.358e^-4	0.87	DOWNSTREAM CG6873 INTERGENIC
2R	3980372	2R_3980372_SNP [dm3] 2R_8092867_SNP [dm6]	T	A	4.363e^-4	0.87	INTRON CG8713
X	18457812	X_18457812_SNP [dm3] X_18563779_SNP [dm6]	A	G	4.378e^-4	0.87	INTRON Bx
X	8797412	X_8797412_SNP [dm3] X_8903379_SNP [dm6]	C	T	4.379e^-4	0.87	UTR_3_PRIME Rbm13 DOWNSTREAM e_r_
2R	16523603	2R_16523603_SNP [dm3] 2R_20636098_SNP [dm6]	T	A	4.379e^-4	0.87	UPSTREAM CG13436 INTRON rig	TF binding site mE1_TFBS_cad
3L	2309444	3L_2309444_SNP [dm3] 3L_2309444_SNP [dm6]	T	G	4.380e^-4	0.87	INTERGENIC
2L	14431014	2L_14431014_SNP [dm3] 2L_14431014_SNP [dm6]	T	C	4.390e^-4	0.87	UPSTREAM CR44732 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	13588263	3R_13588263_INS [dm3] 3R_17762541_INS [dm6]	G	GTCG	4.396e^-4	0.87	UTR_5_PRIME TyrR UPSTREAM TyrR
2R	7281419	2R_7281419_SNP [dm3] 2R_11393914_SNP [dm6]	G	T	4.396e^-4	0.87	UPSTREAM tRNA:CR30257 INTRON sprt
X	9223102	X_9223102_INS [dm3] X_9329069_INS [dm6]	A	ACCAGGTTAACTAGTGTGGT...	4.400e^-4	0.87	UTR_3_PRIME CG34450 INTRON CG34449
X	12813845	X_12813845_SNP [dm3] X_12919812_SNP [dm6]	A	T	4.406e^-4	0.87	INTRON fne
3L	16135128	3L_16135128_SNP [dm3] 3L_16142028_SNP [dm6]	A	G	4.412e^-4	0.87	INTRON CG5151 & 1 other	TF binding site mE1_TFBS_cad
2R	9007522	2R_9007522_SNP [dm3] 2R_13120017_SNP [dm6]	A	G	4.415e^-4	0.87	INTRON CG13325
3R	10119752	3R_10119752_SNP [dm3] 3R_14294030_SNP [dm6]	T	A	4.415e^-4	0.87	INTRON CG12207
3R	12289667	3R_12289667_SNP [dm3] 3R_16463945_SNP [dm6]	T	C	4.420e^-4	0.87	SYNONYMOUS_CODING CG42232	TF binding site mE1_TFBS_sens
3R	3225802	3R_3225802_SNP [dm3] 3R_7400080_SNP [dm6]	A	T	4.422e^-4	0.87	INTERGENIC
3R	6531710	3R_6531710_SNP [dm3] 3R_10705988_SNP [dm6]	C	T	4.447e^-4	0.87	SYNONYMOUS_CODING CG31467 UPSTREAM CG31391 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	10182653	3L_10182653_SNP [dm3] 3L_10189553_SNP [dm6]	G	A	4.448e^-4	0.87	DOWNSTREAM ect INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Kr
3L	772041	3L_772041_SNP [dm3] 3L_772041_SNP [dm6]	T	C	4.449e^-4	0.87	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	4438165	3R_4438165_SNP [dm3] 3R_8612443_SNP [dm6]	A	G	4.456e^-4	0.87	INTRON 5-HT2B
3L	5503782	3L_5503782_SNP [dm3] 3L_5510682_SNP [dm6]	G	A	4.456e^-4	0.87	INTRON CG34342
3R	13951978	3R_13951978_SNP [dm3] 3R_18126256_SNP [dm6]	A	C	4.460e^-4	0.87	INTRON sr	TF binding site BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3125010	3L_3125010_SNP [dm3] 3L_3125010_SNP [dm6]	G	A	4.469e^-4	0.87	INTRON prominin-like
3L	16146471	3L_16146471_SNP [dm3] 3L_16153371_SNP [dm6]	T	C	4.471e^-4	0.87	INTRON CG5151
3L	8145820	3L_8145820_INS [dm3] 3L_8152720_INS [dm6]	T	TCATATTGATAT...	4.471e^-4	0.87	UPSTREAM CG13676 INTERGENIC
3R	8666021	3R_8666021_SNP [dm3] 3R_12840299_SNP [dm6]	G	A	4.480e^-4	0.87	DOWNSTREAM beat-Va INTERGENIC
3R	22009730	3R_22009730_DEL [dm3] 3R_26184008_DEL [dm6]	GCTTAAATATATCTTTCCT...	G	4.494e^-4	0.87	INTRON CG31323	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna
3L	4886577	3L_4886577_SNP [dm3] 3L_4886577_SNP [dm6]	C	T	4.498e^-4	0.87	INTRON CG17150
3R	3267542	3R_3267542_SNP [dm3] 3R_7441820_SNP [dm6]	A	G	4.502e^-4	0.87	UTR_3_PRIME CG14598
2L	13556709	2L_13556709_SNP [dm3] 2L_13556709_SNP [dm6]	T	G	4.508e^-4	0.87	INTRON kuz
3L	12381250	3L_12381250_SNP [dm3] 3L_12388150_SNP [dm6]	A	T	4.509e^-4	0.87	UPSTREAM Ncc69 INTRON Ncc69
X	14842574	X_14842574_SNP [dm3] X_14948541_SNP [dm6]	G	A	4.511e^-4	0.87	INTRON pdgy
2R	19654968	2R_19654968_SNP [dm3] 2R_23767445_SNP [dm6]	G	A	4.516e^-4	0.87	SPLICE_SITE_REGION CG9850 INTRON CG9850
3L	10816632	3L_10816632_SNP [dm3] 3L_10823532_SNP [dm6]	C	A	4.529e^-4	0.87	INTERGENIC
2L	21685501	2L_21685501_SNP [dm3] 2L_21685501_SNP [dm6]	C	T	4.531e^-4	0.87	INTRON CG31619
2L	12665002	2L_12665002_SNP [dm3] 2L_12665002_SNP [dm6]	T	C	4.537e^-4	0.87	INTRON pdm2	TF binding site mE1_TFBS_cad
2L	5014045	2L_5014045_SNP [dm3] 2L_5014045_SNP [dm6]	A	G	4.547e^-4	0.87	SYNONYMOUS_CODING vkg	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	15769828	2L_15769828_SNP [dm3] 2L_15769828_SNP [dm6]	A	G	4.547e^-4	0.87	SYNONYMOUS_CODING Ku80	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	15179696	3R_15179696_SNP [dm3] 3R_19353974_SNP [dm6]	A	T	4.551e^-4	0.87	UPSTREAM CG43203 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_Kr
3R	25815981	3R_25815981_SNP [dm3] 3R_29990259_SNP [dm6]	G	A	4.553e^-4	0.87	SYNONYMOUS_CODING CG7896 DOWNSTREAM Acph-1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	8540900	2L_8540900_SNP [dm3] 2L_8540900_SNP [dm6]	T	C	4.555e^-4	0.87	SYNONYMOUS_CODING CG17834 UPSTREAM tRNA:CR31603 DOWNSTREAM tRNA:CR31604	TF binding site BDTNP1_TFBS_twi
3L	6558707	3L_6558707_SNP [dm3] 3L_6565607_SNP [dm6]	T	C	4.565e^-4	0.87	SYNONYMOUS_CODING jv INTRON CG18769	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	12747590	3R_12747590_SNP [dm3] 3R_16921868_SNP [dm6]	A	T	4.567e^-4	0.87	INTRON iab-8	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3L	812596	3L_812596_INS [dm3] 3L_812596_INS [dm6]	T	TAT	4.569e^-4	0.87	UPSTREAM CR44537 INTERGENIC
3R	1137350	3R_1137350_SNP [dm3] 3R_5311628_SNP [dm6]	T	C	4.572e^-4	0.87	INTRON mtd
2L	13267623	2L_13267623_SNP [dm3] 2L_13267623_SNP [dm6]	C	T	4.576e^-4	0.87	UTR_5_PRIME CG44085 INTRON CG44085
3R	10427673	3R_10427673_SNP [dm3] 3R_14601951_SNP [dm6]	T	G	4.578e^-4	0.87	UPSTREAM stumps INTRON stumps
2L	7560334	2L_7560334_SNP [dm3] 2L_7560334_SNP [dm6]	T	A	4.587e^-4	0.87	INTRON RapGAP1
3L	7872680	3L_7872680_DEL [dm3] 3L_7879580_DEL [dm6]	ATGTA	A	4.588e^-4	0.87	INTRON CG32365	TF binding site mE1_TFBS_HSA
X	5591823	X_5591823_SNP [dm3] X_5697790_SNP [dm6]	A	G	4.596e^-4	0.87	UPSTREAM CG4096 DOWNSTREAM CR42794 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	16835956	2L_16835956_SNP [dm3] 2L_16835956_SNP [dm6]	A	T	4.600e^-4	0.87	NON_SYNONYMOUS_CODING CG13283	TF binding site mE1_TFBS_sens
3L	5502701	3L_5502701_SNP [dm3] 3L_5509601_SNP [dm6]	C	T	4.609e^-4	0.87	INTRON CG34342	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	11862662	3R_11862662_SNP [dm3] 3R_16036940_SNP [dm6]	C	T	4.609e^-4	0.87	INTRON pnr	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	8493716	2R_8493716_SNP [dm3] 2R_12606211_SNP [dm6]	T	A	4.614e^-4	0.87	INTRON Amph
3R	11862643	3R_11862643_SNP [dm3] 3R_16036921_SNP [dm6]	A	G	4.629e^-4	0.87	INTRON pnr	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	6780755	2L_6780755_SNP [dm3] 2L_6780755_SNP [dm6]	C	G	4.631e^-4	0.87	INTRON nrv1
X	11108805	X_11108805_SNP [dm3] X_11214772_SNP [dm6]	T	C	4.632e^-4	0.87	INTERGENIC
3R	15828710	3R_15828710_SNP [dm3] 3R_20002988_SNP [dm6]	G	A	4.633e^-4	0.87	INTRON Hs6st	TF binding site mE1_TFBS_cad
3L	3568700	3L_3568700_SNP [dm3] 3L_3568700_SNP [dm6]	T	A	4.633e^-4	0.87	INTRON Eip63E	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
3L	17582218	3L_17582218_SNP [dm3] 3L_17589118_SNP [dm6]	G	T	4.634e^-4	0.87	INTRON Eip74EF
3L	17457141	3L_17457141_SNP [dm3] 3L_17464041_SNP [dm6]	G	A	4.639e^-4	0.87	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
3R	15289724	3R_15289724_SNP [dm3] 3R_19464002_SNP [dm6]	G	A	4.648e^-4	0.87	UPSTREAM CG6255 INTRON Dys	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl
2L	10963737	2L_10963737_SNP [dm3] 2L_10963737_SNP [dm6]	T	C	4.660e^-4	0.87	UTR_5_PRIME dpr2 INTRON dpr2
3R	20722789	3R_20722789_SNP [dm3] 3R_24897067_SNP [dm6]	A	G	4.662e^-4	0.87	SYNONYMOUS_CODING CG11069 DOWNSTREAM CG13643
3R	26065679	3R_26065679_SNP [dm3] 3R_30239957_SNP [dm6]	A	T	4.686e^-4	0.87	INTERGENIC	TF binding site mE1_TFBS_D mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Trl
2R	12319496	2R_12319496_SNP [dm3] 2R_16431991_SNP [dm6]	T	C	4.694e^-4	0.87	UPSTREAM CG4398 DOWNSTREAM Sema-2b INTERGENIC	TF binding site mE1_TFBS_HSA
2L	15966042	2L_15966042_SNP [dm3] 2L_15966042_SNP [dm6]	T	G	4.695e^-4	0.87	INTERGENIC
3R	25481313	3R_25481313_SNP [dm3] 3R_29655591_SNP [dm6]	A	T	4.702e^-4	0.87	INTRON Dop1R2
2L	19915382	2L_19915382_SNP [dm3] 2L_19915382_SNP [dm6]	G	A	4.711e^-4	0.87	INTRON sick	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
2R	15176000	2R_15176000_SNP [dm3] 2R_19288495_SNP [dm6]	C	T	4.714e^-4	0.87	SYNONYMOUS_CODING CG18606 UPSTREAM CG18607	TF binding site mE1_TFBS_HSA
2L	12232529	2L_12232529_DEL [dm3] 2L_12232529_DEL [dm6]	TT	T	4.721e^-4	0.87	INTRON aret
3L	16160241	3L_16160241_SNP [dm3] 3L_16167141_SNP [dm6]	G	C	4.724e^-4	0.87	INTERGENIC
2L	7586765	2L_7586765_SNP [dm3] 2L_7586765_SNP [dm6]	A	T	4.728e^-4	0.87	INTERGENIC
3R	3226830	3R_3226830_SNP [dm3] 3R_7401108_SNP [dm6]	A	T	4.728e^-4	0.87	INTERGENIC
2R	20194367	2R_20194367_SNP [dm3] 2R_24306844_SNP [dm6]	C	T	4.745e^-4	0.87	INTRON betaTub60D	regulatory region REDfly_CRMs
2L	6314354	2L_6314354_SNP [dm3] 2L_6314354_SNP [dm6]	C	T	4.752e^-4	0.87	INTRON Ddr
X	2362858	X_2362858_SNP [dm3] X_2468825_SNP [dm6]	T	A	4.754e^-4	0.87	INTRON boi	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	6548199	3R_6548199_SNP [dm3] 3R_10722477_SNP [dm6]	C	T	4.764e^-4	0.87	INTERGENIC
2L	17296651	2L_17296651_SNP [dm3] 2L_17296651_SNP [dm6]	T	C	4.771e^-4	0.87	INTERGENIC
2R	16937515	2R_16937515_SNP [dm3] 2R_21050010_SNP [dm6]	G	T	4.774e^-4	0.87	UTR_3_PRIME shg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	9178717	3R_9178717_SNP [dm3] 3R_13352995_SNP [dm6]	C	G	4.777e^-4	0.87	UPSTREAM mthl12 INTERGENIC
3L	5503777	3L_5503777_SNP [dm3] 3L_5510677_SNP [dm6]	C	A	4.780e^-4	0.87	INTRON CG34342
3R	15771682	3R_15771682_SNP [dm3] 3R_19945960_SNP [dm6]	T	A	4.782e^-4	0.87	INTRON Hs6st
3L	5509312	3L_5509312_SNP [dm3] 3L_5516212_SNP [dm6]	C	A	4.783e^-4	0.87	INTRON Lkr	TF binding site mE1_TFBS_cad
X	8059625	X_8059625_SNP [dm3] X_8165592_SNP [dm6]	T	G	4.783e^-4	0.87	SYNONYMOUS_CODING Or7a DOWNSTREAM CG2278
2R	14221737	2R_14221737_SNP [dm3] 2R_18334232_SNP [dm6]	G	A	4.784e^-4	0.87	INTRON sbb
2R	17389113	2R_17389113_SNP [dm3] 2R_21501608_SNP [dm6]	A	G	4.787e^-4	0.87	UPSTREAM MESK2 INTRON TAF1C-like	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_Ubx
2R	18053018	2R_18053018_SNP [dm3] 2R_22165513_SNP [dm6]	A	G	4.788e^-4	0.87	UPSTREAM CG34206 INTRON a
3R	19016607	3R_19016607_SNP [dm3] 3R_23190885_SNP [dm6]	G	A	4.798e^-4	0.87	UTR_5_PRIME cnc UPSTREAM cnc INTRON cnc	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl

By genomic position
Variant impact
Gene name

DA_mean phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results