©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
Filters
| By genomic position | |
| Variant impact | |
| Gene name |
| Involved in binding site | |
| Binding site |
GWAS results were computed on dm3 genome.
If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype:
DGRP2 results
PLINK2 results
Phenotype distribution and association to known covariates
Shapiro-Wilk test of normality (p-value=4.592e-4)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype
We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using
both ANOVA and Kruskal-Wallis association tests.
GWAS results
667
significant hits at p-value < 0.001.
We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001.
Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes.
GO enrichment
FlyBase phenotype enrichment
Variant impact HIGH MODERATE LOW MODIFIER
| Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
|---|---|---|---|---|---|---|---|---|---|
| 2L | 10441088 | 2L_10441088_SNP [dm3] 2L_10441088_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CG13142 & 1 other INTERGENIC |
||
| 2L | 11086228 | 2L_11086228_SNP [dm3] 2L_11086228_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
AstCC & 1 other INTERGENIC |
||
| 2L | 11819954 | 2L_11819954_SNP [dm3] 2L_11819954_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTRON
Pde1c |
||
| 2L | 12093404 | 2L_12093404_SNP [dm3] 2L_12093404_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
Pex19 INTRON Pex19 |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA |
|
| 2L | 1361204 | 2L_1361204_SNP [dm3] 2L_1361204_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
NLaz |
||
| 2L | 15822976 | 2L_15822976_SNP [dm3] 2L_15822976_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR44601 INTERGENIC |
||
| 2L | 15822984 | 2L_15822984_SNP [dm3] 2L_15822984_SNP [dm6] | G | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR44601 INTERGENIC |
||
| 2L | 16149861 | 2L_16149861_SNP [dm3] 2L_16149861_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 19774448 | 2L_19774448_SNP [dm3] 2L_19774448_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CdGAPr INTERGENIC |
||
| 2L | 3146900 | 2L_3146900_SNP [dm3] 2L_3146900_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
Mad |
||
| 2L | 5771770 | 2L_5771770_SNP [dm3] 2L_5771770_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CR31912 INTRON CG9171 |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_zfh1
|
|
| 2L | 6735839 | 2L_6735839_SNP [dm3] 2L_6735839_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
TTLL3B DOWNSTREAM TTLL3A |
||
| 2L | 7174983 | 2L_7174983_SNP [dm3] 2L_7174983_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR44610 INTERGENIC |
||
| 2L | 7900771 | 2L_7900771_SNP [dm3] 2L_7900771_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
Snoo |
||
| 2L | 9410348 | 2L_9410348_SNP [dm3] 2L_9410348_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
INTRON
Shawl |
||
| 2R | 10239422 | 2R_10239422_SNP [dm3] 2R_14351917_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG8613 DOWNSTREAM Shroom INTERGENIC |
TF binding site
mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
|
|
| 2R | 1181231 | 2R_1181231_SNP [dm3] 2R_5293726_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
d4 INTRON d4 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
| 2R | 1385040 | 2R_1385040_SNP [dm3] 2R_5497535_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
INTRON
CG30438 |
||
| 2R | 14273319 | 2R_14273319_SNP [dm3] 2R_18385814_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG15067 & 1 other DOWNSTREAM CG18107 INTERGENIC |
||
| 2R | 14285502 | 2R_14285502_SNP [dm3] 2R_18397997_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
GstE1 & 1 other INTRON GstE10 |
||
| 2R | 19083512 | 2R_19083512_SNP [dm3] 2R_23195989_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
CG34371 |
TF binding site
BDTNP1_TFBS_twi
|
|
| 2R | 19083513 | 2R_19083513_SNP [dm3] 2R_23195990_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTRON
CG34371 |
TF binding site
BDTNP1_TFBS_twi
|
|
| 2R | 5342967 | 2R_5342967_SNP [dm3] 2R_9455462_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG33757 INTRON Camta |
||
| 2R | 5342978 | 2R_5342978_SNP [dm3] 2R_9455473_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG33757 INTRON Camta |
||
| 2R | 5855988 | 2R_5855988_DEL [dm3] 2R_9968483_DEL [dm6] | ACATTTAACA | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
Adam DOWNSTREAM CG12133 INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_jumu
|
|
| 2R | 9123237 | 2R_9123237_SNP [dm3] 2R_13235732_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG4676 & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 10502771 | 3L_10502771_SNP [dm3] 3L_10509671_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
A2bp1 |
||
| 3L | 10600567 | 3L_10600567_SNP [dm3] 3L_10607467_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 10600572 | 3L_10600572_SNP [dm3] 3L_10607472_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 10600575 | 3L_10600575_SNP [dm3] 3L_10607475_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 11131414 | 3L_11131414_SNP [dm3] 3L_11138314_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
CG32082 |
||
| 3L | 12258143 | 3L_12258143_SNP [dm3] 3L_12265043_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
app |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
| 3L | 12321277 | 3L_12321277_SNP [dm3] 3L_12328177_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
| 3L | 12647073 | 3L_12647073_DEL [dm3] 3L_12653973_DEL [dm6] | AC | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR43431 INTERGENIC |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi |
|
| 3L | 13193867 | 3L_13193867_SNP [dm3] 3L_13200767_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_prd
|
|
| 3L | 15679513 | 3L_15679513_SNP [dm3] 3L_15686413_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
pgant8 & 1 other |
||
| 3L | 15940765 | 3L_15940765_SNP [dm3] 3L_15947665_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
Pka-C3 |
||
| 3L | 18368627 | 3L_18368627_SNP [dm3] 3L_18375527_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
| 3L | 3368257 | 3L_3368257_SNP [dm3] 3L_3368257_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
kst INTERGENIC |
||
| 3L | 41266 | 3L_41266_SNP [dm3] 3L_41266_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
| 3L | 4406656 | 3L_4406656_SNP [dm3] 3L_4406656_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
DOR & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
|
|
| 3L | 44935 | 3L_44935_SNP [dm3] 3L_44935_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 44968 | 3L_44968_DEL [dm3] 3L_44968_DEL [dm6] | GG | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 44987 | 3L_44987_DEL [dm3] 3L_44987_DEL [dm6] | AAATAAATAAAA... | CCAATATT | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 5043548 | 3L_5043548_SNP [dm3] 3L_5043548_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
Con |
||
| 3L | 7965381 | 3L_7965381_DEL [dm3] 3L_7972281_DEL [dm6] | TATATTTGTAT... | T | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
RNaseX25 DOWNSTREAM CG8042 |
||
| 3L | 9384259 | 3L_9384259_SNP [dm3] 3L_9391159_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
INTRON
CG4080 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| 3L | 9424800 | 3L_9424800_SNP [dm3] 3L_9431700_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
MTF-1 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 9424809 | 3L_9424809_SNP [dm3] 3L_9431709_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
MTF-1 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3R | 10166576 | 3R_10166576_INS [dm3] 3R_14340854_INS [dm6] | A | AG | 8.184e-9 | 5.473e-5 |
INTRON
NK7.1 |
||
| 3R | 10831499 | 3R_10831499_SNP [dm3] 3R_15005777_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR45599 INTERGENIC |
||
| 3R | 11976770 | 3R_11976770_SNP [dm3] 3R_16151048_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTRON
Fer2 |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 11976775 | 3R_11976775_SNP [dm3] 3R_16151053_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTRON
Fer2 |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 13513073 | 3R_13513073_SNP [dm3] 3R_17687351_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513074 | 3R_13513074_SNP [dm3] 3R_17687352_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513083 | 3R_13513083_DEL [dm3] 3R_17687361_DEL [dm6] | AT | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513090 | 3R_13513090_DEL [dm3] 3R_17687368_DEL [dm6] | TGTAAGTTCTT... | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513102 | 3R_13513102_SNP [dm3] 3R_17687380_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13660952 | 3R_13660952_SNP [dm3] 3R_17835230_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
tinc |
||
| 3R | 13660965 | 3R_13660965_SNP [dm3] 3R_17835243_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
tinc |
||
| 3R | 13660975 | 3R_13660975_SNP [dm3] 3R_17835253_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
tinc |
||
| 3R | 14972348 | 3R_14972348_SNP [dm3] 3R_19146626_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
Ppcs |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 16725607 | 3R_16725607_SNP [dm3] 3R_20899885_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 21236667 | 3R_21236667_SNP [dm3] 3R_25410945_SNP [dm6] | A | C | 8.184e-9 | 5.473e-5 |
INTRON
Fur1 |
||
| 3R | 21428789 | 3R_21428789_SNP [dm3] 3R_25603067_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
msi DOWNSTREAM msi INTRON ymp |
||
| 3R | 21649007 | 3R_21649007_DEL [dm3] 3R_25823285_DEL [dm6] | AA | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CR44949 INTERGENIC |
||
| 3R | 21672745 | 3R_21672745_SNP [dm3] 3R_25847023_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CR45656 & 1 other EXON CR45655 |
||
| 3R | 22856868 | 3R_22856868_SNP [dm3] 3R_27031146_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
RYa-R |
||
| 3R | 22856874 | 3R_22856874_SNP [dm3] 3R_27031152_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
RYa-R |
||
| 3R | 3421129 | 3R_3421129_SNP [dm3] 3R_7595407_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
CG34127 |
||
| 3R | 422198 | 3R_422198_SNP [dm3] 3R_4596476_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
EXON
CR44317 |
||
| X | 10569600 | X_10569600_SNP [dm3] X_10675567_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
INTRON
X11Lbeta |
||
| X | 11198301 | X_11198301_SNP [dm3] X_11304268_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| X | 11198304 | X_11198304_SNP [dm3] X_11304271_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| X | 11198310 | X_11198310_SNP [dm3] X_11304277_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| X | 14680852 | X_14680852_SNP [dm3] X_14786819_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
Ag5r DOWNSTREAM rut EXON CR45522 |
||
| X | 14680853 | X_14680853_SNP [dm3] X_14786820_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
Ag5r DOWNSTREAM rut EXON CR45522 |
||
| X | 14896830 | X_14896830_SNP [dm3] X_15002797_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTRON
eag |
||
| X | 19231123 | X_19231123_DEL [dm3] X_19337090_DEL [dm6] | AG | A | 8.184e-9 | 5.473e-5 |
INTRON
nAChRalpha7 |
TF binding site
BDTNP1_TFBS_dl
|
|
| X | 20417801 | X_20417801_SNP [dm3] X_20546774_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
INTRON
RunxB |
||
| X | 20456258 | X_20456258_INS [dm3] X_20585231_INS [dm6] | T | TT | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 4244031 | X_4244031_SNP [dm3] X_4349998_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
norpA |
||
| X | 6345205 | X_6345205_SNP [dm3] X_6451172_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
CG42340 |
||
| X | 8514229 | X_8514229_SNP [dm3] X_8620196_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| X | 9622694 | X_9622694_SNP [dm3] X_9728661_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR43498 & 1 other INTERGENIC |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA |
|
| 2L | 15105383 | 2L_15105383_SNP [dm3] 2L_15105383_SNP [dm6] | A | T | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 15882559 | 2L_15882559_SNP [dm3] 2L_15882559_SNP [dm6] | C | T | 8.847e-9 | 5.473e-5 |
DOWNSTREAM
CG44475 INTERGENIC |
TF binding site
mE1_TFBS_HSA
|
|
| 2R | 13588595 | 2R_13588595_SNP [dm3] 2R_17701090_SNP [dm6] | C | T | 8.847e-9 | 5.473e-5 |
UPSTREAM
snoRNA:U27:54Ea & 3 others DOWNSTREAM snoRNA:U29:54Eb & 3 others INTRON Uhg1 |
||
| 2R | 17081195 | 2R_17081195_INS [dm3] 2R_21193690_INS [dm6] | A | AATATATAAA | 8.847e-9 | 5.473e-5 |
UTR_5_PRIME
Lapsyn DOWNSTREAM tud |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 10522164 | 3L_10522164_SNP [dm3] 3L_10529064_SNP [dm6] | T | G | 8.847e-9 | 5.473e-5 |
INTRON
A2bp1 |
TF binding site
mE1_TFBS_eve mE1_TFBS_HSA
|
|
| 3L | 11965661 | 3L_11965661_SNP [dm3] 3L_11972561_SNP [dm6] | A | G | 8.847e-9 | 5.473e-5 |
NON_SYNONYMOUS_CODING
Muc68E DOWNSTREAM CG42397 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
| 3L | 18330737 | 3L_18330737_SNP [dm3] 3L_18337637_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 22126279 | 3R_22126279_SNP [dm3] 3R_26300557_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 24464494 | 3R_24464494_SNP [dm3] 3R_28638772_SNP [dm6] | C | A | 8.847e-9 | 5.473e-5 |
UTR_3_PRIME
CG9988 |
||
| 3R | 24464506 | 3R_24464506_SNP [dm3] 3R_28638784_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
UTR_3_PRIME
CG9988 |
||
| 3R | 24581073 | 3R_24581073_SNP [dm3] 3R_28755351_SNP [dm6] | T | G | 8.847e-9 | 5.473e-5 |
DOWNSTREAM
CG9997 INTERGENIC |
||
| 3R | 25565949 | 3R_25565949_DEL [dm3] 3R_29740227_DEL [dm6] | ATAGCAAATGA... | A | 8.847e-9 | 5.473e-5 |
UPSTREAM
CG1969 INTRON CG1969 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
|
|
| 3R | 2688907 | 3R_2688907_SNP [dm3] 3R_6863185_SNP [dm6] | A | G | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
regulatory region
FlyBase REDfly_CRMs
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad |
|
| 3R | 3576205 | 3R_3576205_DEL [dm3] 3R_7750483_DEL [dm6] | CAG | TT | 8.847e-9 | 5.473e-5 |
UPSTREAM
pyd3 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl
|
|
| X | 14245282 | X_14245282_SNP [dm3] X_14351249_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
INTRON
dpr8 |
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