©2022-2024 Deplancke lab, EPFL, 1015 Lausanne
GWAS results were computed on dm3 genome.
If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype:
DGRP2 results
PLINK2 results
Phenotype distribution and association to known covariates
Shapiro-Wilk test of normality (p-value=4.592e-4)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype
We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using
both ANOVA and Kruskal-Wallis association tests.
GWAS results
667
significant hits at p-value < 0.001.
We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001.
Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes.
GO enrichment
FlyBase phenotype enrichment
Variant impact HIGH MODERATE LOW MODIFIER
| Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
|---|---|---|---|---|---|---|---|---|---|
| 2L | 10441088 | 2L_10441088_SNP [dm3] 2L_10441088_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CG13142 & 1 other INTERGENIC |
||
| 2L | 11086228 | 2L_11086228_SNP [dm3] 2L_11086228_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
AstCC & 1 other INTERGENIC |
||
| 2L | 11819954 | 2L_11819954_SNP [dm3] 2L_11819954_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTRON
Pde1c |
||
| 2L | 12093404 | 2L_12093404_SNP [dm3] 2L_12093404_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
Pex19 INTRON Pex19 |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA |
|
| 2L | 1361204 | 2L_1361204_SNP [dm3] 2L_1361204_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
NLaz |
||
| 2L | 15822976 | 2L_15822976_SNP [dm3] 2L_15822976_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR44601 INTERGENIC |
||
| 2L | 15822984 | 2L_15822984_SNP [dm3] 2L_15822984_SNP [dm6] | G | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR44601 INTERGENIC |
||
| 2L | 16149861 | 2L_16149861_SNP [dm3] 2L_16149861_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 19774448 | 2L_19774448_SNP [dm3] 2L_19774448_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CdGAPr INTERGENIC |
||
| 2L | 3146900 | 2L_3146900_SNP [dm3] 2L_3146900_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
Mad |
||
| 2L | 5771770 | 2L_5771770_SNP [dm3] 2L_5771770_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CR31912 INTRON CG9171 |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_zfh1
|
|
| 2L | 6735839 | 2L_6735839_SNP [dm3] 2L_6735839_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
TTLL3B DOWNSTREAM TTLL3A |
||
| 2L | 7174983 | 2L_7174983_SNP [dm3] 2L_7174983_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR44610 INTERGENIC |
||
| 2L | 7900771 | 2L_7900771_SNP [dm3] 2L_7900771_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
Snoo |
||
| 2L | 9410348 | 2L_9410348_SNP [dm3] 2L_9410348_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
INTRON
Shawl |
||
| 2R | 10239422 | 2R_10239422_SNP [dm3] 2R_14351917_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG8613 DOWNSTREAM Shroom INTERGENIC |
TF binding site
mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
|
|
| 2R | 1181231 | 2R_1181231_SNP [dm3] 2R_5293726_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
d4 INTRON d4 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
| 2R | 1385040 | 2R_1385040_SNP [dm3] 2R_5497535_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
INTRON
CG30438 |
||
| 2R | 14273319 | 2R_14273319_SNP [dm3] 2R_18385814_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG15067 & 1 other DOWNSTREAM CG18107 INTERGENIC |
||
| 2R | 14285502 | 2R_14285502_SNP [dm3] 2R_18397997_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
GstE1 & 1 other INTRON GstE10 |
||
| 2R | 19083512 | 2R_19083512_SNP [dm3] 2R_23195989_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
CG34371 |
TF binding site
BDTNP1_TFBS_twi
|
|
| 2R | 19083513 | 2R_19083513_SNP [dm3] 2R_23195990_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTRON
CG34371 |
TF binding site
BDTNP1_TFBS_twi
|
|
| 2R | 5342967 | 2R_5342967_SNP [dm3] 2R_9455462_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG33757 INTRON Camta |
||
| 2R | 5342978 | 2R_5342978_SNP [dm3] 2R_9455473_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG33757 INTRON Camta |
||
| 2R | 5855988 | 2R_5855988_DEL [dm3] 2R_9968483_DEL [dm6] | ACATTTAACA | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
Adam DOWNSTREAM CG12133 INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_jumu
|
|
| 2R | 9123237 | 2R_9123237_SNP [dm3] 2R_13235732_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG4676 & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 10502771 | 3L_10502771_SNP [dm3] 3L_10509671_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
A2bp1 |
||
| 3L | 10600567 | 3L_10600567_SNP [dm3] 3L_10607467_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 10600572 | 3L_10600572_SNP [dm3] 3L_10607472_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 10600575 | 3L_10600575_SNP [dm3] 3L_10607475_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 11131414 | 3L_11131414_SNP [dm3] 3L_11138314_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
CG32082 |
||
| 3L | 12258143 | 3L_12258143_SNP [dm3] 3L_12265043_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
app |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
| 3L | 12321277 | 3L_12321277_SNP [dm3] 3L_12328177_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
| 3L | 12647073 | 3L_12647073_DEL [dm3] 3L_12653973_DEL [dm6] | AC | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR43431 INTERGENIC |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi |
|
| 3L | 13193867 | 3L_13193867_SNP [dm3] 3L_13200767_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_prd
|
|
| 3L | 15679513 | 3L_15679513_SNP [dm3] 3L_15686413_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
pgant8 & 1 other |
||
| 3L | 15940765 | 3L_15940765_SNP [dm3] 3L_15947665_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
Pka-C3 |
||
| 3L | 18368627 | 3L_18368627_SNP [dm3] 3L_18375527_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
| 3L | 3368257 | 3L_3368257_SNP [dm3] 3L_3368257_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
kst INTERGENIC |
||
| 3L | 41266 | 3L_41266_SNP [dm3] 3L_41266_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
| 3L | 4406656 | 3L_4406656_SNP [dm3] 3L_4406656_SNP [dm6] | C | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
DOR & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
|
|
| 3L | 44935 | 3L_44935_SNP [dm3] 3L_44935_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 44968 | 3L_44968_DEL [dm3] 3L_44968_DEL [dm6] | GG | G | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 44987 | 3L_44987_DEL [dm3] 3L_44987_DEL [dm6] | AAATAAATAAAA... | CCAATATT | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 5043548 | 3L_5043548_SNP [dm3] 3L_5043548_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
Con |
||
| 3L | 7965381 | 3L_7965381_DEL [dm3] 3L_7972281_DEL [dm6] | TATATTTGTAT... | T | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
RNaseX25 DOWNSTREAM CG8042 |
||
| 3L | 9384259 | 3L_9384259_SNP [dm3] 3L_9391159_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
INTRON
CG4080 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| 3L | 9424800 | 3L_9424800_SNP [dm3] 3L_9431700_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
MTF-1 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 9424809 | 3L_9424809_SNP [dm3] 3L_9431709_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
MTF-1 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3R | 10166576 | 3R_10166576_INS [dm3] 3R_14340854_INS [dm6] | A | AG | 8.184e-9 | 5.473e-5 |
INTRON
NK7.1 |
||
| 3R | 10831499 | 3R_10831499_SNP [dm3] 3R_15005777_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR45599 INTERGENIC |
||
| 3R | 11976770 | 3R_11976770_SNP [dm3] 3R_16151048_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTRON
Fer2 |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 11976775 | 3R_11976775_SNP [dm3] 3R_16151053_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTRON
Fer2 |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 13513073 | 3R_13513073_SNP [dm3] 3R_17687351_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513074 | 3R_13513074_SNP [dm3] 3R_17687352_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513083 | 3R_13513083_DEL [dm3] 3R_17687361_DEL [dm6] | AT | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513090 | 3R_13513090_DEL [dm3] 3R_17687368_DEL [dm6] | TGTAAGTTCTT... | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13513102 | 3R_13513102_SNP [dm3] 3R_17687380_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
CG31249 DOWNSTREAM osa INTERGENIC |
||
| 3R | 13660952 | 3R_13660952_SNP [dm3] 3R_17835230_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
tinc |
||
| 3R | 13660965 | 3R_13660965_SNP [dm3] 3R_17835243_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
tinc |
||
| 3R | 13660975 | 3R_13660975_SNP [dm3] 3R_17835253_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
tinc |
||
| 3R | 14972348 | 3R_14972348_SNP [dm3] 3R_19146626_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
Ppcs |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 16725607 | 3R_16725607_SNP [dm3] 3R_20899885_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 21236667 | 3R_21236667_SNP [dm3] 3R_25410945_SNP [dm6] | A | C | 8.184e-9 | 5.473e-5 |
INTRON
Fur1 |
||
| 3R | 21428789 | 3R_21428789_SNP [dm3] 3R_25603067_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
UTR_3_PRIME
msi DOWNSTREAM msi INTRON ymp |
||
| 3R | 21649007 | 3R_21649007_DEL [dm3] 3R_25823285_DEL [dm6] | AA | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CR44949 INTERGENIC |
||
| 3R | 21672745 | 3R_21672745_SNP [dm3] 3R_25847023_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
DOWNSTREAM
CR45656 & 1 other EXON CR45655 |
||
| 3R | 22856868 | 3R_22856868_SNP [dm3] 3R_27031146_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
RYa-R |
||
| 3R | 22856874 | 3R_22856874_SNP [dm3] 3R_27031152_SNP [dm6] | T | G | 8.184e-9 | 5.473e-5 |
INTRON
RYa-R |
||
| 3R | 3421129 | 3R_3421129_SNP [dm3] 3R_7595407_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
CG34127 |
||
| 3R | 422198 | 3R_422198_SNP [dm3] 3R_4596476_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
EXON
CR44317 |
||
| X | 10569600 | X_10569600_SNP [dm3] X_10675567_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
INTRON
X11Lbeta |
||
| X | 11198301 | X_11198301_SNP [dm3] X_11304268_SNP [dm6] | G | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| X | 11198304 | X_11198304_SNP [dm3] X_11304271_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| X | 11198310 | X_11198310_SNP [dm3] X_11304277_SNP [dm6] | G | T | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
||
| X | 14680852 | X_14680852_SNP [dm3] X_14786819_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
UPSTREAM
Ag5r DOWNSTREAM rut EXON CR45522 |
||
| X | 14680853 | X_14680853_SNP [dm3] X_14786820_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
Ag5r DOWNSTREAM rut EXON CR45522 |
||
| X | 14896830 | X_14896830_SNP [dm3] X_15002797_SNP [dm6] | C | A | 8.184e-9 | 5.473e-5 |
INTRON
eag |
||
| X | 19231123 | X_19231123_DEL [dm3] X_19337090_DEL [dm6] | AG | A | 8.184e-9 | 5.473e-5 |
INTRON
nAChRalpha7 |
TF binding site
BDTNP1_TFBS_dl
|
|
| X | 20417801 | X_20417801_SNP [dm3] X_20546774_SNP [dm6] | T | C | 8.184e-9 | 5.473e-5 |
INTRON
RunxB |
||
| X | 20456258 | X_20456258_INS [dm3] X_20585231_INS [dm6] | T | TT | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 4244031 | X_4244031_SNP [dm3] X_4349998_SNP [dm6] | A | G | 8.184e-9 | 5.473e-5 |
INTRON
norpA |
||
| X | 6345205 | X_6345205_SNP [dm3] X_6451172_SNP [dm6] | C | T | 8.184e-9 | 5.473e-5 |
INTRON
CG42340 |
||
| X | 8514229 | X_8514229_SNP [dm3] X_8620196_SNP [dm6] | T | A | 8.184e-9 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| X | 9622694 | X_9622694_SNP [dm3] X_9728661_SNP [dm6] | A | T | 8.184e-9 | 5.473e-5 |
UPSTREAM
CR43498 & 1 other INTERGENIC |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA |
|
| 2L | 15105383 | 2L_15105383_SNP [dm3] 2L_15105383_SNP [dm6] | A | T | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 15882559 | 2L_15882559_SNP [dm3] 2L_15882559_SNP [dm6] | C | T | 8.847e-9 | 5.473e-5 |
DOWNSTREAM
CG44475 INTERGENIC |
TF binding site
mE1_TFBS_HSA
|
|
| 2R | 13588595 | 2R_13588595_SNP [dm3] 2R_17701090_SNP [dm6] | C | T | 8.847e-9 | 5.473e-5 |
UPSTREAM
snoRNA:U27:54Ea & 3 others DOWNSTREAM snoRNA:U29:54Eb & 3 others INTRON Uhg1 |
||
| 2R | 17081195 | 2R_17081195_INS [dm3] 2R_21193690_INS [dm6] | A | AATATATAAA | 8.847e-9 | 5.473e-5 |
UTR_5_PRIME
Lapsyn DOWNSTREAM tud |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 10522164 | 3L_10522164_SNP [dm3] 3L_10529064_SNP [dm6] | T | G | 8.847e-9 | 5.473e-5 |
INTRON
A2bp1 |
TF binding site
mE1_TFBS_eve mE1_TFBS_HSA
|
|
| 3L | 11965661 | 3L_11965661_SNP [dm3] 3L_11972561_SNP [dm6] | A | G | 8.847e-9 | 5.473e-5 |
NON_SYNONYMOUS_CODING
Muc68E DOWNSTREAM CG42397 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
| 3L | 18330737 | 3L_18330737_SNP [dm3] 3L_18337637_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 22126279 | 3R_22126279_SNP [dm3] 3R_26300557_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 24464494 | 3R_24464494_SNP [dm3] 3R_28638772_SNP [dm6] | C | A | 8.847e-9 | 5.473e-5 |
UTR_3_PRIME
CG9988 |
||
| 3R | 24464506 | 3R_24464506_SNP [dm3] 3R_28638784_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
UTR_3_PRIME
CG9988 |
||
| 3R | 24581073 | 3R_24581073_SNP [dm3] 3R_28755351_SNP [dm6] | T | G | 8.847e-9 | 5.473e-5 |
DOWNSTREAM
CG9997 INTERGENIC |
||
| 3R | 25565949 | 3R_25565949_DEL [dm3] 3R_29740227_DEL [dm6] | ATAGCAAATGA... | A | 8.847e-9 | 5.473e-5 |
UPSTREAM
CG1969 INTRON CG1969 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
|
|
| 3R | 2688907 | 3R_2688907_SNP [dm3] 3R_6863185_SNP [dm6] | A | G | 8.847e-9 | 5.473e-5 |
INTERGENIC
|
regulatory region
FlyBase REDfly_CRMs
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad |
|
| 3R | 3576205 | 3R_3576205_DEL [dm3] 3R_7750483_DEL [dm6] | CAG | TT | 8.847e-9 | 5.473e-5 |
UPSTREAM
pyd3 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl
|
|
| X | 14245282 | X_14245282_SNP [dm3] X_14351249_SNP [dm6] | T | C | 8.847e-9 | 5.473e-5 |
INTRON
dpr8 |
||
| X | 22018125 | X_22018125_SNP [dm3] X_22616289_SNP [dm6] | C | G | 8.847e-9 | 5.473e-5 |
INTRON
Cda4 |
||
| 2L | 16077631 | 2L_16077631_SNP [dm3] 2L_16077631_SNP [dm6] | T | C | 8.933e-9 | 5.473e-5 |
INTRON
beat-Ia |
||
| 2L | 16077634 | 2L_16077634_SNP [dm3] 2L_16077634_SNP [dm6] | G | A | 8.933e-9 | 5.473e-5 |
INTRON
beat-Ia |
||
| 2L | 3467635 | 2L_3467635_SNP [dm3] 2L_3467635_SNP [dm6] | A | C | 8.933e-9 | 5.473e-5 |
UTR_3_PRIME
CG3238 DOWNSTREAM Pdsw |
||
| 2L | 4449250 | 2L_4449250_SNP [dm3] 2L_4449250_SNP [dm6] | C | T | 8.933e-9 | 5.473e-5 |
UPSTREAM
MFS18 DOWNSTREAM CG15439 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| 2R | 11840601 | 2R_11840601_DEL [dm3] 2R_15953096_DEL [dm6] | AGGTGGAGTCGGA... | A | 8.933e-9 | 5.473e-5 |
CODON_DELETION
Strn-Mlck UPSTREAM Strn-Mlck |
TF binding site
mE1_TFBS_cad
|
|
| 2R | 13087192 | 2R_13087192_SNP [dm3] 2R_17199687_SNP [dm6] | T | C | 8.933e-9 | 5.473e-5 |
INTERGENIC
|
||
| 2R | 13946995 | 2R_13946995_SNP [dm3] 2R_18059490_SNP [dm6] | A | C | 8.933e-9 | 5.473e-5 |
UPSTREAM
CR45314 INTERGENIC |
||
| 2R | 19092377 | 2R_19092377_SNP [dm3] 2R_23204854_SNP [dm6] | T | A | 8.933e-9 | 5.473e-5 |
UPSTREAM
CG34371 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl
|
|
| 2R | 9628058 | 2R_9628058_SNP [dm3] 2R_13740553_SNP [dm6] | T | C | 8.933e-9 | 5.473e-5 |
INTRON
fas |
||
| 3L | 18068374 | 3L_18068374_INS [dm3] 3L_18075274_INS [dm6] | T | TT | 8.933e-9 | 5.473e-5 |
UPSTREAM
CR45391 INTERGENIC |
||
| 3L | 21324750 | 3L_21324750_SNP [dm3] 3L_21331650_SNP [dm6] | T | A | 8.933e-9 | 5.473e-5 |
INTRON
Rab26 |
||
| 3L | 6705509 | 3L_6705509_SNP [dm3] 3L_6712409_SNP [dm6] | A | C | 8.933e-9 | 5.473e-5 |
DOWNSTREAM
ple INTERGENIC |
||
| 3L | 9637562 | 3L_9637562_INS [dm3] 3L_9644462_INS [dm6] | G | GG | 8.933e-9 | 5.473e-5 |
UTR_5_PRIME
CG33696 INTRON fry |
||
| 3R | 1159769 | 3R_1159769_SNP [dm3] 3R_5334047_SNP [dm6] | T | C | 8.933e-9 | 5.473e-5 |
INTRON
mtd |
||
| 3R | 12856557 | 3R_12856557_SNP [dm3] 3R_17030835_SNP [dm6] | C | T | 8.933e-9 | 5.473e-5 |
UPSTREAM
CG31268 DOWNSTREAM CG5225 INTERGENIC |
||
| 3R | 12910636 | 3R_12910636_INS [dm3] 3R_17084914_INS [dm6] | T | TAAC | 8.933e-9 | 5.473e-5 |
UPSTREAM
GckIII DOWNSTREAM kuk INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad
|
|
| 3R | 16887604 | 3R_16887604_SNP [dm3] 3R_21061882_SNP [dm6] | A | G | 8.933e-9 | 5.473e-5 |
UTR_3_PRIME
Cortactin |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 17558201 | 3R_17558201_DEL [dm3] 3R_21732479_DEL [dm6] | CC | C | 8.933e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 22231618 | 3R_22231618_SNP [dm3] 3R_26405896_SNP [dm6] | T | C | 8.933e-9 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 3137748 | 3R_3137748_SNP [dm3] 3R_7312026_SNP [dm6] | A | G | 8.933e-9 | 5.473e-5 |
DOWNSTREAM
CR44334 INTERGENIC |
||
| 3R | 8582608 | 3R_8582608_SNP [dm3] 3R_12756886_SNP [dm6] | A | C | 8.933e-9 | 5.473e-5 |
INTRON
beat-Vc |
TF binding site
mE1_TFBS_inv
|
|
| 3R | 9913846 | 3R_9913846_SNP [dm3] 3R_14088124_SNP [dm6] | G | A | 8.933e-9 | 5.473e-5 |
DOWNSTREAM
foxo INTERGENIC |
||
| X | 12839818 | X_12839818_SNP [dm3] X_12945785_SNP [dm6] | T | C | 8.933e-9 | 5.473e-5 |
UTR_3_PRIME
fne |
||
| X | 13529779 | X_13529779_SNP [dm3] X_13635746_SNP [dm6] | C | A | 8.933e-9 | 5.473e-5 |
INTRON
NFAT |
||
| X | 17978434 | X_17978434_SNP [dm3] X_18084401_SNP [dm6] | A | G | 8.933e-9 | 5.473e-5 |
INTRON
CG7536 |
||
| X | 18063002 | X_18063002_DEL [dm3] X_18168969_DEL [dm6] | GAGGCACATTG... | G | 8.933e-9 | 5.473e-5 |
INTRON
Frq1 |
||
| X | 6445381 | X_6445381_SNP [dm3] X_6551348_SNP [dm6] | C | A | 8.933e-9 | 5.473e-5 |
INTRON
CG34417 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| X | 6711087 | X_6711087_SNP [dm3] X_6817054_SNP [dm6] | C | A | 8.933e-9 | 5.473e-5 |
SYNONYMOUS_CODING
iav |
TF binding site
mE1_TFBS_chinmo
|
|
| 2L | 11476912 | 2L_11476912_SNP [dm3] 2L_11476912_SNP [dm6] | A | C | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 17611844 | 2L_17611844_SNP [dm3] 2L_17611844_SNP [dm6] | G | A | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2R | 10013743 | 2R_10013743_SNP [dm3] 2R_14126238_SNP [dm6] | A | T | 1.109e-8 | 5.473e-5 |
INTRON
Prosap |
||
| 2R | 11139684 | 2R_11139684_SNP [dm3] 2R_15252179_SNP [dm6] | G | A | 1.109e-8 | 5.473e-5 |
UPSTREAM
scb INTRON scb |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 2R | 11139686 | 2R_11139686_SNP [dm3] 2R_15252181_SNP [dm6] | T | C | 1.109e-8 | 5.473e-5 |
UPSTREAM
scb INTRON scb |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 2R | 15405974 | 2R_15405974_SNP [dm3] 2R_19518469_SNP [dm6] | A | T | 1.109e-8 | 5.473e-5 |
UTR_3_PRIME
sm |
||
| 2R | 17120557 | 2R_17120557_SNP [dm3] 2R_21233052_SNP [dm6] | G | A | 1.109e-8 | 5.473e-5 |
INTRON
ASPP |
||
| 2R | 17447625 | 2R_17447625_SNP [dm3] 2R_21560120_SNP [dm6] | T | G | 1.109e-8 | 5.473e-5 |
DOWNSTREAM
CG10440 & 1 other INTERGENIC |
||
| 2R | 17447632 | 2R_17447632_SNP [dm3] 2R_21560127_SNP [dm6] | C | A | 1.109e-8 | 5.473e-5 |
DOWNSTREAM
CG10440 & 1 other INTERGENIC |
||
| 3L | 11420439 | 3L_11420439_DEL [dm3] 3L_11427339_DEL [dm6] | CTTATTTTCGC... | C | 1.109e-8 | 5.473e-5 |
DOWNSTREAM
CG7560 INTERGENIC |
||
| 3L | 11662030 | 3L_11662030_SNP [dm3] 3L_11668930_SNP [dm6] | A | T | 1.109e-8 | 5.473e-5 |
INTRON
CG32085 |
||
| 3L | 18851686 | 3L_18851686_SNP [dm3] 3L_18858586_SNP [dm6] | A | T | 1.109e-8 | 5.473e-5 |
DOWNSTREAM
CR45388 INTERGENIC |
||
| 3L | 21354831 | 3L_21354831_SNP [dm3] 3L_21361731_SNP [dm6] | G | T | 1.109e-8 | 5.473e-5 |
DOWNSTREAM
CG32440 INTERGENIC |
||
| 3L | 2192982 | 3L_2192982_SNP [dm3] 3L_2192982_SNP [dm6] | A | G | 1.109e-8 | 5.473e-5 |
UPSTREAM
CG5707 INTERGENIC |
TF binding site
mE1_TFBS_cad
|
|
| 3L | 6579462 | 3L_6579462_SNP [dm3] 3L_6586362_SNP [dm6] | C | T | 1.109e-8 | 5.473e-5 |
INTRON
CG18769 & 1 other |
||
| 3R | 11271882 | 3R_11271882_SNP [dm3] 3R_15446160_SNP [dm6] | G | T | 1.109e-8 | 5.473e-5 |
INTRON
AdamTS-A |
||
| 3R | 12625229 | 3R_12625229_SNP [dm3] 3R_16799507_SNP [dm6] | T | C | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
mE1_TFBS_bab1 mE1_TFBS_zfh1
|
|
| 3R | 14837623 | 3R_14837623_SNP [dm3] 3R_19011901_SNP [dm6] | T | C | 1.109e-8 | 5.473e-5 |
INTRON
gukh |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad
|
|
| 3R | 16002362 | 3R_16002362_SNP [dm3] 3R_20176640_SNP [dm6] | G | T | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 16002380 | 3R_16002380_SNP [dm3] 3R_20176658_SNP [dm6] | T | G | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 17652031 | 3R_17652031_SNP [dm3] 3R_21826309_SNP [dm6] | A | G | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| 3R | 20514347 | 3R_20514347_SNP [dm3] 3R_24688625_SNP [dm6] | G | A | 1.109e-8 | 5.473e-5 |
INTRON
slo |
||
| 3R | 20514364 | 3R_20514364_SNP [dm3] 3R_24688642_SNP [dm6] | T | A | 1.109e-8 | 5.473e-5 |
INTRON
slo |
||
| 3R | 23477553 | 3R_23477553_SNP [dm3] 3R_27651831_SNP [dm6] | A | T | 1.109e-8 | 5.473e-5 |
UPSTREAM
RpS10a INTRON tau |
TF binding site
mE1_TFBS_bab1
|
|
| 3R | 3225782 | 3R_3225782_SNP [dm3] 3R_7400060_SNP [dm6] | T | A | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 7876022 | 3R_7876022_SNP [dm3] 3R_12050300_SNP [dm6] | C | T | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
||
| X | 10618899 | X_10618899_INS [dm3] X_10724866_INS [dm6] | A | AA | 1.109e-8 | 5.473e-5 |
INTRON
CG32676 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| X | 11182624 | X_11182624_SNP [dm3] X_11288591_SNP [dm6] | A | C | 1.109e-8 | 5.473e-5 |
INTRON
CG44422 |
||
| X | 12100146 | X_12100146_DEL [dm3] X_12206113_DEL [dm6] | TC | T | 1.109e-8 | 5.473e-5 |
INTRON
Ten-a |
TF binding site
mE1_TFBS_cad mE1_TFBS_Kr
|
|
| X | 12100180 | X_12100180_SNP [dm3] X_12206147_SNP [dm6] | T | G | 1.109e-8 | 5.473e-5 |
INTRON
Ten-a |
TF binding site
mE1_TFBS_cad mE1_TFBS_Kr
|
|
| X | 12100181 | X_12100181_SNP [dm3] X_12206148_SNP [dm6] | G | T | 1.109e-8 | 5.473e-5 |
INTRON
Ten-a |
TF binding site
mE1_TFBS_cad mE1_TFBS_Kr
|
|
| X | 13137353 | X_13137353_SNP [dm3] X_13243320_SNP [dm6] | C | A | 1.109e-8 | 5.473e-5 |
INTRON
mew |
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
| X | 14785175 | X_14785175_DEL [dm3] X_14891142_DEL [dm6] | CA | C | 1.109e-8 | 5.473e-5 |
INTRON
Flo2 & 1 other |
||
| X | 16885448 | X_16885448_SNP [dm3] X_16991415_SNP [dm6] | T | C | 1.109e-8 | 5.473e-5 |
INTRON
CG45002 |
||
| X | 22043109 | X_22043109_SNP [dm3] X_22641273_SNP [dm6] | G | C | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
transposable element
FlyBase
|
|
| X | 22043113 | X_22043113_INS [dm3] X_22641277_INS [dm6] | C | CGACTTTTGTTGTGCTTTGT... | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
transposable element
FlyBase
|
|
| X | 22224692 | X_22224692_SNP [dm3] X_22822856_SNP [dm6] | C | T | 1.109e-8 | 5.473e-5 |
INTERGENIC
|
transposable element
FlyBase
|
|
| X | 8731911 | X_8731911_SNP [dm3] X_8837878_SNP [dm6] | T | A | 1.109e-8 | 5.473e-5 |
UPSTREAM
CG12075 INTERGENIC |
TF binding site
mE1_TFBS_bab1
|
|
| 2L | 10961491 | 2L_10961491_SNP [dm3] 2L_10961491_SNP [dm6] | A | T | 1.157e-8 | 5.473e-5 |
INTRON
dpr2 |
||
| 2L | 10961497 | 2L_10961497_SNP [dm3] 2L_10961497_SNP [dm6] | C | T | 1.157e-8 | 5.473e-5 |
INTRON
dpr2 |
||
| 2L | 12093344 | 2L_12093344_INS [dm3] 2L_12093344_INS [dm6] | A | ACATA | 1.157e-8 | 5.473e-5 |
UPSTREAM
CR44594 & 1 other INTRON Pex19 |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA |
|
| 2R | 10867499 | 2R_10867499_SNP [dm3] 2R_14979994_SNP [dm6] | A | T | 1.157e-8 | 5.473e-5 |
UTR_3_PRIME
ckn |
||
| 2R | 11875645 | 2R_11875645_SNP [dm3] 2R_15988140_SNP [dm6] | C | T | 1.157e-8 | 5.473e-5 |
UPSTREAM
Strn-Mlck DOWNSTREAM CR45021 INTRON Strn-Mlck |
||
| 2R | 14818001 | 2R_14818001_SNP [dm3] 2R_18930496_SNP [dm6] | A | C | 1.157e-8 | 5.473e-5 |
INTRON
sano |
||
| 2R | 21117780 | 2R_21117780_SNP [dm3] 2R_25230257_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
UTR_3_PRIME
Kr DOWNSTREAM Kr INTRON CG9380 |
||
| 2R | 21124145 | 2R_21124145_SNP [dm3] 2R_25236622_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
INTRON
CG9380 |
TF binding site
mE1_TFBS_Kr
|
|
| 2R | 9412327 | 2R_9412327_SNP [dm3] 2R_13524822_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
UPSTREAM
CG13332 INTRON Vmat |
||
| 3L | 11593488 | 3L_11593488_SNP [dm3] 3L_11600388_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
UPSTREAM
CG14137 INTRON CG7368 |
||
| 3L | 12109081 | 3L_12109081_INS [dm3] 3L_12115981_INS [dm6] | A | ATTT | 1.157e-8 | 5.473e-5 |
UPSTREAM
l_3_j2D3 INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
|
|
| 3L | 12109083 | 3L_12109083_SNP [dm3] 3L_12115983_SNP [dm6] | C | A | 1.157e-8 | 5.473e-5 |
UPSTREAM
l_3_j2D3 INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
|
|
| 3L | 12226906 | 3L_12226906_SNP [dm3] 3L_12233806_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
INTRON
app |
||
| 3L | 13897275 | 3L_13897275_SNP [dm3] 3L_13904175_SNP [dm6] | T | A | 1.157e-8 | 5.473e-5 |
UPSTREAM
dysc INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 14168658 | 3L_14168658_SNP [dm3] 3L_14175558_SNP [dm6] | C | A | 1.157e-8 | 5.473e-5 |
DOWNSTREAM
D INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_dl |
|
| 3L | 14723761 | 3L_14723761_SNP [dm3] 3L_14730661_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
INTRON
ome |
||
| 3L | 14810533 | 3L_14810533_SNP [dm3] 3L_14817433_SNP [dm6] | G | A | 1.157e-8 | 5.473e-5 |
INTRON
CG17839 |
||
| 3L | 15626936 | 3L_15626936_DEL [dm3] 3L_15633836_DEL [dm6] | TGTATAGTGA | T | 1.157e-8 | 5.473e-5 |
INTRON
comm3 |
||
| 3L | 16204363 | 3L_16204363_SNP [dm3] 3L_16211263_SNP [dm6] | G | T | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 16204381 | 3L_16204381_SNP [dm3] 3L_16211281_SNP [dm6] | T | G | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 16204386 | 3L_16204386_SNP [dm3] 3L_16211286_SNP [dm6] | A | C | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 16204393 | 3L_16204393_SNP [dm3] 3L_16211293_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 16204400 | 3L_16204400_SNP [dm3] 3L_16211300_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 18208084 | 3L_18208084_SNP [dm3] 3L_18214984_SNP [dm6] | G | T | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
| 3L | 20781873 | 3L_20781873_INS [dm3] 3L_20788773_INS [dm6] | A | AGAAAAT | 1.157e-8 | 5.473e-5 |
UPSTREAM
CG11396 DOWNSTREAM Six4 INTERGENIC |
TF binding site
BDTNP1_TFBS_twi
|
|
| 3L | 3142446 | 3L_3142446_SNP [dm3] 3L_3142446_SNP [dm6] | C | T | 1.157e-8 | 5.473e-5 |
INTRON
CG11537 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
| 3L | 3316342 | 3L_3316342_SNP [dm3] 3L_3316342_SNP [dm6] | A | C | 1.157e-8 | 5.473e-5 |
UPSTREAM
Drsl5 DOWNSTREAM Drsl3 & 1 other INTERGENIC |
TF binding site
mE1_TFBS_HSA
|
|
| 3L | 3316343 | 3L_3316343_SNP [dm3] 3L_3316343_SNP [dm6] | A | T | 1.157e-8 | 5.473e-5 |
UPSTREAM
Drsl5 DOWNSTREAM Drsl3 & 1 other INTERGENIC |
TF binding site
mE1_TFBS_HSA
|
|
| 3L | 4082953 | 3L_4082953_DEL [dm3] 3L_4082953_DEL [dm6] | TT | T | 1.157e-8 | 5.473e-5 |
INTRON
Gad1 |
||
| 3L | 6543874 | 3L_6543874_SNP [dm3] 3L_6550774_SNP [dm6] | T | A | 1.157e-8 | 5.473e-5 |
UTR_5_PRIME
CG18769 DOWNSTREAM sfl |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_kn mE1_TFBS_Trl
|
|
| 3L | 7258220 | 3L_7258220_SNP [dm3] 3L_7265120_SNP [dm6] | A | C | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 10159941 | 3R_10159941_SNP [dm3] 3R_14334219_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
INTRON
NK7.1 |
||
| 3R | 10219619 | 3R_10219619_SNP [dm3] 3R_14393897_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
SYNONYMOUS_CODING
cv-c |
||
| 3R | 14241371 | 3R_14241371_SNP [dm3] 3R_18415649_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
UTR_3_PRIME
fru |
||
| 3R | 15972565 | 3R_15972565_SNP [dm3] 3R_20146843_SNP [dm6] | G | C | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 16996360 | 3R_16996360_SNP [dm3] 3R_21170638_SNP [dm6] | T | A | 1.157e-8 | 5.473e-5 |
INTRON
SNF4Agamma |
||
| 3R | 18149252 | 3R_18149252_SNP [dm3] 3R_22323530_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
INTRON
CG34377 |
||
| 3R | 18149253 | 3R_18149253_SNP [dm3] 3R_22323531_SNP [dm6] | T | G | 1.157e-8 | 5.473e-5 |
INTRON
CG34377 |
||
| 3R | 18149257 | 3R_18149257_SNP [dm3] 3R_22323535_SNP [dm6] | G | A | 1.157e-8 | 5.473e-5 |
INTRON
CG34377 |
||
| 3R | 18149261 | 3R_18149261_SNP [dm3] 3R_22323539_SNP [dm6] | C | G | 1.157e-8 | 5.473e-5 |
INTRON
CG34377 |
||
| 3R | 5946077 | 3R_5946077_SNP [dm3] 3R_10120355_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
DOWNSTREAM
gammaSnap2 & 1 other INTERGENIC |
TF binding site
mE1_TFBS_cnc mE1_TFBS_HSA
|
|
| 3R | 8705576 | 3R_8705576_SNP [dm3] 3R_12879854_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 9298627 | 3R_9298627_SNP [dm3] 3R_13472905_SNP [dm6] | T | G | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 9839152 | 3R_9839152_SNP [dm3] 3R_14013430_SNP [dm6] | A | G | 1.157e-8 | 5.473e-5 |
INTRON
rdx |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA
|
|
| X | 10012662 | X_10012662_SNP [dm3] X_10118629_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
INTRON
RhoU & 1 other |
||
| X | 10345335 | X_10345335_SNP [dm3] X_10451302_SNP [dm6] | C | A | 1.157e-8 | 5.473e-5 |
INTRON
CG32683 |
||
| X | 11320928 | X_11320928_MNP [dm3] X_11426895_MNP [dm6] | GCGG | TTTT | 1.157e-8 | 5.473e-5 |
INTRON
Gs2 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 11320932 | X_11320932_INS [dm3] X_11426899_INS [dm6] | A | AAT | 1.157e-8 | 5.473e-5 |
INTRON
Gs2 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 11320937 | X_11320937_SNP [dm3] X_11426904_SNP [dm6] | G | C | 1.157e-8 | 5.473e-5 |
INTRON
Gs2 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 11320940 | X_11320940_SNP [dm3] X_11426907_SNP [dm6] | C | A | 1.157e-8 | 5.473e-5 |
INTRON
Gs2 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 11320952 | X_11320952_SNP [dm3] X_11426919_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
INTRON
Gs2 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 11320954 | X_11320954_SNP [dm3] X_11426921_SNP [dm6] | A | T | 1.157e-8 | 5.473e-5 |
INTRON
Gs2 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 11320956 | X_11320956_SNP [dm3] X_11426923_SNP [dm6] | T | A | 1.157e-8 | 5.473e-5 |
INTRON
Gs2 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| X | 16950897 | X_16950897_SNP [dm3] X_17056864_SNP [dm6] | T | C | 1.157e-8 | 5.473e-5 |
INTRON
CG45002 |
||
| X | 18554978 | X_18554978_SNP [dm3] X_18660945_SNP [dm6] | C | T | 1.157e-8 | 5.473e-5 |
UTR_3_PRIME
fu INTRON CG6696 |
||
| X | 2778995 | X_2778995_SNP [dm3] X_2884962_SNP [dm6] | G | T | 1.157e-8 | 5.473e-5 |
DOWNSTREAM
CG14419 INTRON kirre |
||
| X | 2996920 | X_2996920_SNP [dm3] X_3102887_SNP [dm6] | G | A | 1.157e-8 | 5.473e-5 |
INTRON
kirre |
||
| X | 4573774 | X_4573774_SNP [dm3] X_4679741_SNP [dm6] | C | T | 1.157e-8 | 5.473e-5 |
UPSTREAM
rap DOWNSTREAM Pp2C1 INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
|
|
| X | 887659 | X_887659_SNP [dm3] X_993626_SNP [dm6] | C | T | 1.157e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 14868055 | 2L_14868055_DEL [dm3] 2L_14868055_DEL [dm6] | AA | A | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 7637546 | 2L_7637546_SNP [dm3] 2L_7637546_SNP [dm6] | C | T | 1.251e-8 | 5.473e-5 |
DOWNSTREAM
CR44799 & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
|
|
| 2R | 12969632 | 2R_12969632_SNP [dm3] 2R_17082127_SNP [dm6] | C | T | 1.251e-8 | 5.473e-5 |
INTRON
CG30460 |
||
| 2R | 16657175 | 2R_16657175_DEL [dm3] 2R_20769670_DEL [dm6] | GG | G | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2R | 17890853 | 2R_17890853_INS [dm3] 2R_22003348_INS [dm6] | C | CAGATC | 1.251e-8 | 5.473e-5 |
INTRON
CG34370 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
| 2R | 18025083 | 2R_18025083_SNP [dm3] 2R_22137578_SNP [dm6] | T | C | 1.251e-8 | 5.473e-5 |
START_GAINED
a UTR_5_PRIME a INTRON a |
TF binding site
mE1_TFBS_run mE1_TFBS_Trl
|
|
| 2R | 6076809 | 2R_6076809_SNP [dm3] 2R_10189304_SNP [dm6] | G | T | 1.251e-8 | 5.473e-5 |
INTRON
KCNQ |
||
| 2R | 7834103 | 2R_7834103_SNP [dm3] 2R_11946598_SNP [dm6] | A | G | 1.251e-8 | 5.473e-5 |
INTRON
CG13188 |
||
| 2R | 8206489 | 2R_8206489_DEL [dm3] 2R_12318984_DEL [dm6] | AAACACATTG | A | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
transposable element
FlyBase
|
|
| 2R | 9216598 | 2R_9216598_INS [dm3] 2R_13329093_INS [dm6] | A | ATGTA | 1.251e-8 | 5.473e-5 |
DOWNSTREAM
CR44206 & 1 other INTERGENIC |
||
| 3L | 13485937 | 3L_13485937_DEL [dm3] 3L_13492837_DEL [dm6] | CTGT | C | 1.251e-8 | 5.473e-5 |
INTRON
Tgi |
||
| 3L | 14132024 | 3L_14132024_SNP [dm3] 3L_14138924_SNP [dm6] | T | G | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
regulatory region
REDfly_CRMs
TF binding site mE1_TFBS_inv |
|
| 3L | 17402065 | 3L_17402065_DEL [dm3] 3L_17408965_DEL [dm6] | ATCATTAACATTTTATAGTT... | A | 1.251e-8 | 5.473e-5 |
INTRON
blot |
||
| 3L | 23532195 | 3L_23532195_SNP [dm3] 3L_23539095_SNP [dm6] | C | A | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 23532200 | 3L_23532200_INS [dm3] 3L_23539100_INS [dm6] | T | TGGGCACCAA | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 23532204 | 3L_23532204_INS [dm3] 3L_23539104_INS [dm6] | A | AAAGCAAT | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 23532206 | 3L_23532206_SNP [dm3] 3L_23539106_SNP [dm6] | G | C | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3L | 7123475 | 3L_7123475_SNP [dm3] 3L_7130375_SNP [dm6] | T | G | 1.251e-8 | 5.473e-5 |
UPSTREAM
CG8628 DOWNSTREAM CG15829 INTERGENIC |
TF binding site
mE1_TFBS_cnc mE1_TFBS_HSA
|
|
| 3L | 9511652 | 3L_9511652_SNP [dm3] 3L_9518552_SNP [dm6] | A | T | 1.251e-8 | 5.473e-5 |
INTRON
CG33700 |
||
| 3R | 14138238 | 3R_14138238_SNP [dm3] 3R_18312516_SNP [dm6] | C | T | 1.251e-8 | 5.473e-5 |
UPSTREAM
PKD INTRON PKD |
TF binding site
BDTNP1_TFBS_z mE1_TFBS_HSA
|
|
| 3R | 14453727 | 3R_14453727_SNP [dm3] 3R_18628005_SNP [dm6] | G | A | 1.251e-8 | 5.473e-5 |
DOWNSTREAM
tRNA:CR31228 INTRON qin |
||
| 3R | 14453732 | 3R_14453732_SNP [dm3] 3R_18628010_SNP [dm6] | T | A | 1.251e-8 | 5.473e-5 |
DOWNSTREAM
tRNA:CR31228 INTRON qin |
TF binding site
BDTNP1_TFBS_twi
|
|
| 3R | 22479159 | 3R_22479159_SNP [dm3] 3R_26653437_SNP [dm6] | A | T | 1.251e-8 | 5.473e-5 |
INTRON
beat-VII |
||
| 3R | 22607815 | 3R_22607815_INS [dm3] 3R_26782093_INS [dm6] | G | GCC | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 25065877 | 3R_25065877_SNP [dm3] 3R_29240155_SNP [dm6] | A | T | 1.251e-8 | 5.473e-5 |
DOWNSTREAM
CG31445 INTRON CG31427 |
||
| 3R | 25065878 | 3R_25065878_SNP [dm3] 3R_29240156_SNP [dm6] | A | C | 1.251e-8 | 5.473e-5 |
DOWNSTREAM
CG31445 INTRON CG31427 |
||
| 3R | 25902068 | 3R_25902068_SNP [dm3] 3R_30076346_SNP [dm6] | T | C | 1.251e-8 | 5.473e-5 |
INTRON
sima |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 3R | 25902069 | 3R_25902069_DEL [dm3] 3R_30076347_DEL [dm6] | CG | C | 1.251e-8 | 5.473e-5 |
INTRON
sima |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 3R | 26987417 | 3R_26987417_SNP [dm3] 3R_31161695_SNP [dm6] | G | A | 1.251e-8 | 5.473e-5 |
INTRON
Gycbeta100B & 1 other |
||
| X | 19298848 | X_19298848_SNP [dm3] X_19404815_SNP [dm6] | T | C | 1.251e-8 | 5.473e-5 |
INTRON
kek5 |
||
| X | 3247062 | X_3247062_SNP [dm3] X_3353029_SNP [dm6] | T | C | 1.251e-8 | 5.473e-5 |
INTERGENIC
|
regulatory region
REDfly_CRMs
|
|
| X | 7129597 | X_7129597_DEL [dm3] X_7235564_DEL [dm6] | CA | C | 1.251e-8 | 5.473e-5 |
INTRON
CR44357 & 1 other |
TF binding site
BDTNP1_TFBS_twi
|
|
| 2L | 10322334 | 2L_10322334_SNP [dm3] 2L_10322334_SNP [dm6] | T | C | 1.263e-8 | 5.473e-5 |
UPSTREAM
CG4995 & 1 other INTRON CG5381 |
TF binding site
mE1_TFBS_zfh1
|
|
| 2L | 22422802 | 2L_22422802_DEL [dm3] 2L_22530070_DEL [dm6] | TTTT | T | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 7286633 | 2L_7286633_DEL [dm3] 2L_7286633_DEL [dm6] | TTT | T | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 9951537 | 2L_9951537_SNP [dm3] 2L_9951537_SNP [dm6] | C | G | 1.263e-8 | 5.473e-5 |
DOWNSTREAM
CG13126 INTERGENIC |
||
| 2R | 13764194 | 2R_13764194_SNP [dm3] 2R_17876689_SNP [dm6] | T | C | 1.263e-8 | 5.473e-5 |
DOWNSTREAM
CG30325 INTRON Elk |
||
| 2R | 13764201 | 2R_13764201_SNP [dm3] 2R_17876696_SNP [dm6] | T | G | 1.263e-8 | 5.473e-5 |
DOWNSTREAM
CG30325 INTRON Elk |
||
| 2R | 16531474 | 2R_16531474_SNP [dm3] 2R_20643969_SNP [dm6] | C | T | 1.263e-8 | 5.473e-5 |
UPSTREAM
DMAP1 & 2 others INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
|
|
| 2R | 16895263 | 2R_16895263_INS [dm3] 2R_21007758_INS [dm6] | C | CTTTGTCC | 1.263e-8 | 5.473e-5 |
UTR_3_PRIME
CG30291 DOWNSTREAM CG10543 |
||
| 2R | 8546995 | 2R_8546995_INS [dm3] 2R_12659490_INS [dm6] | A | ACTTC | 1.263e-8 | 5.473e-5 |
DOWNSTREAM
nemy & 1 other INTERGENIC |
||
| 3L | 10516212 | 3L_10516212_DEL [dm3] 3L_10523112_DEL [dm6] | CTCGTTT | C | 1.263e-8 | 5.473e-5 |
INTRON
A2bp1 |
||
| 3L | 11526612 | 3L_11526612_SNP [dm3] 3L_11533512_SNP [dm6] | C | T | 1.263e-8 | 5.473e-5 |
INTRON
Mob2 |
||
| 3L | 11895537 | 3L_11895537_SNP [dm3] 3L_11902437_SNP [dm6] | T | C | 1.263e-8 | 5.473e-5 |
INTRON
CG44837 |
||
| 3L | 14994743 | 3L_14994743_SNP [dm3] 3L_15001643_SNP [dm6] | T | A | 1.263e-8 | 5.473e-5 |
UTR_3_PRIME
Reck DOWNSTREAM Prosbeta2 |
||
| 3L | 20455594 | 3L_20455594_SNP [dm3] 3L_20462494_SNP [dm6] | A | G | 1.263e-8 | 5.473e-5 |
DOWNSTREAM
mag INTRON CG5195 |
||
| 3L | 9504818 | 3L_9504818_SNP [dm3] 3L_9511718_SNP [dm6] | T | G | 1.263e-8 | 5.473e-5 |
UPSTREAM
snoRNA:Me28S-G3253 & 1 other DOWNSTREAM CG33703 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA
|
|
| 3R | 12358108 | 3R_12358108_DEL [dm3] 3R_16532386_DEL [dm6] | CTGTGGG | C | 1.263e-8 | 5.473e-5 |
INTRON
CG42342 |
||
| 3R | 12358116 | 3R_12358116_SNP [dm3] 3R_16532394_SNP [dm6] | T | A | 1.263e-8 | 5.473e-5 |
INTRON
CG42342 |
||
| 3R | 13462654 | 3R_13462654_INS [dm3] 3R_17636932_INS [dm6] | C | CACACACACACACATG... | 1.263e-8 | 5.473e-5 |
INTRON
CG43175 |
||
| 3R | 17326678 | 3R_17326678_SNP [dm3] 3R_21500956_SNP [dm6] | T | A | 1.263e-8 | 5.473e-5 |
INTRON
C15 |
||
| 3R | 21851859 | 3R_21851859_SNP [dm3] 3R_26026137_SNP [dm6] | A | T | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi
|
|
| 3R | 22813623 | 3R_22813623_SNP [dm3] 3R_26987901_SNP [dm6] | T | C | 1.263e-8 | 5.473e-5 |
UPSTREAM
CG31075 INTRON CG31075 |
||
| 3R | 8423023 | 3R_8423023_SNP [dm3] 3R_12597301_SNP [dm6] | C | T | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
||
| X | 16097876 | X_16097876_DEL [dm3] X_16203843_DEL [dm6] | TT | T | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Kr
|
|
| X | 16138723 | X_16138723_SNP [dm3] X_16244690_SNP [dm6] | C | A | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
silencer
mE1_HDAC_PRE
TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1 |
|
| X | 16138725 | X_16138725_SNP [dm3] X_16244692_SNP [dm6] | T | A | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
silencer
mE1_HDAC_PRE
TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1 |
|
| X | 16138726 | X_16138726_SNP [dm3] X_16244693_SNP [dm6] | T | A | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
silencer
mE1_HDAC_PRE
TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1 |
|
| X | 18254739 | X_18254739_SNP [dm3] X_18360706_SNP [dm6] | C | T | 1.263e-8 | 5.473e-5 |
INTRON
CG6106 |
||
| X | 18822097 | X_18822097_SNP [dm3] X_18928064_SNP [dm6] | G | C | 1.263e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
| X | 19726813 | X_19726813_SNP [dm3] X_19832780_SNP [dm6] | A | T | 1.263e-8 | 5.473e-5 |
UTR_3_PRIME
pico |
||
| X | 19726815 | X_19726815_INS [dm3] X_19832782_INS [dm6] | T | TGT | 1.263e-8 | 5.473e-5 |
UTR_3_PRIME
pico |
||
| X | 8828707 | X_8828707_SNP [dm3] X_8934674_SNP [dm6] | T | A | 1.263e-8 | 5.473e-5 |
INTRON
rdgA |
||
| 3L | 10972034 | 3L_10972034_SNP [dm3] 3L_10978934_SNP [dm6] | T | G | 1.418e-8 | 5.473e-5 |
UPSTREAM
CR45745 INTERGENIC |
||
| 3L | 16115245 | 3L_16115245_SNP [dm3] 3L_16122145_SNP [dm6] | G | A | 1.418e-8 | 5.473e-5 |
SPLICE_SITE_ACCEPTOR
CG12272 UTR_5_PRIME CG12272 DOWNSTREAM Taf4 INTRON CG12272 |
insulator
Insulator_Class_I.mE01
TF binding site mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_ttk |
|
| 3R | 10424366 | 3R_10424366_SNP [dm3] 3R_14598644_SNP [dm6] | T | G | 1.418e-8 | 5.473e-5 |
INTRON
stumps |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3R | 15344741 | 3R_15344741_SNP [dm3] 3R_19519019_SNP [dm6] | C | A | 1.418e-8 | 5.473e-5 |
INTRON
Dys |
||
| X | 11324800 | X_11324800_SNP [dm3] X_11430767_SNP [dm6] | C | T | 1.418e-8 | 5.473e-5 |
UTR_3_PRIME
Evi5 DOWNSTREAM Gs2 & 1 other |
||
| X | 19024673 | X_19024673_SNP [dm3] X_19130640_SNP [dm6] | G | A | 1.418e-8 | 5.473e-5 |
INTERGENIC
|
||
| X | 20800391 | X_20800391_SNP [dm3] X_20929364_SNP [dm6] | C | A | 1.418e-8 | 5.473e-5 |
INTERGENIC
|
transposable element
FlyBase
|
|
| X | 21874439 | X_21874439_SNP [dm3] X_22472603_SNP [dm6] | T | A | 1.418e-8 | 5.473e-5 |
UPSTREAM
CG14613 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl
|
|
| 2L | 5692105 | 2L_5692105_SNP [dm3] 2L_5692105_SNP [dm6] | C | T | 1.455e-8 | 5.473e-5 |
UPSTREAM
CR44820 DOWNSTREAM CR44819 INTERGENIC |
||
| 2L | 9387027 | 2L_9387027_SNP [dm3] 2L_9387027_SNP [dm6] | A | G | 1.455e-8 | 5.473e-5 |
UPSTREAM
Aldh INTRON Shawl |
||
| 2R | 16707647 | 2R_16707647_DEL [dm3] 2R_20820142_DEL [dm6] | ACGCGCACCATA... | A | 1.455e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2R | 17057143 | 2R_17057143_SNP [dm3] 2R_21169638_SNP [dm6] | T | G | 1.455e-8 | 5.473e-5 |
NON_SYNONYMOUS_CODING
hng1 UPSTREAM CG4266 DOWNSTREAM LSm1 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
| 2R | 5391781 | 2R_5391781_SNP [dm3] 2R_9504276_SNP [dm6] | T | A | 1.455e-8 | 5.473e-5 |
INTRON
brp |
||
| 2R | 6415413 | 2R_6415413_DEL [dm3] 2R_10527908_DEL [dm6] | AGGACTGCAA | A | 1.455e-8 | 5.473e-5 |
INTRON
lola |
||
| 3L | 11045369 | 3L_11045369_SNP [dm3] 3L_11052269_SNP [dm6] | C | T | 1.455e-8 | 5.473e-5 |
UPSTREAM
CG43693 INTERGENIC |
||
| 3L | 11137822 | 3L_11137822_SNP [dm3] 3L_11144722_SNP [dm6] | T | G | 1.455e-8 | 5.473e-5 |
INTRON
CG32082 |
||
| 3L | 12851405 | 3L_12851405_DEL [dm3] 3L_12858305_DEL [dm6] | AAGATAAAAATAATA... | A | 1.455e-8 | 5.473e-5 |
UTR_3_PRIME
CG32107 DOWNSTREAM Ent3 INTRON CG32107 |
||
| 3L | 1416866 | 3L_1416866_INS [dm3] 3L_1416866_INS [dm6] | A | TAGT | 1.455e-8 | 5.473e-5 |
INTRON
Ptp61F |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_sens
|
|
| 3L | 15528171 | 3L_15528171_SNP [dm3] 3L_15535071_SNP [dm6] | A | T | 1.455e-8 | 5.473e-5 |
UPSTREAM
CrebA INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 17695213 | 3L_17695213_SNP [dm3] 3L_17702113_SNP [dm6] | G | C | 1.455e-8 | 5.473e-5 |
INTRON
Ccn |
||
| 3L | 22501178 | 3L_22501178_SNP [dm3] 3L_22508078_SNP [dm6] | A | C | 1.455e-8 | 5.473e-5 |
INTERGENIC
|
transposable element
FlyBase
|
|
| 3L | 4644708 | 3L_4644708_MNP [dm3] 3L_4644708_MNP [dm6] | CTT | GCA | 1.455e-8 | 5.473e-5 |
INTRON
axo |
TF binding site
BDTNP1_TFBS_dl
|
|
| 3R | 17750704 | 3R_17750704_INS [dm3] 3R_21924982_INS [dm6] | A | AA | 1.455e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 18526058 | 3R_18526058_SNP [dm3] 3R_22700336_SNP [dm6] | T | A | 1.455e-8 | 5.473e-5 |
DOWNSTREAM
CCAP & 1 other INTERGENIC |
||
| 3R | 21361109 | 3R_21361109_SNP [dm3] 3R_25535387_SNP [dm6] | T | C | 1.455e-8 | 5.473e-5 |
INTRON
msi |
||
| X | 14241885 | X_14241885_SNP [dm3] X_14347852_SNP [dm6] | G | A | 1.455e-8 | 5.473e-5 |
INTRON
dpr8 |
||
| X | 19444511 | X_19444511_SNP [dm3] X_19550478_SNP [dm6] | T | A | 1.455e-8 | 5.473e-5 |
UPSTREAM
mir-972 INTERGENIC |
||
| X | 5152586 | X_5152586_MNP [dm3] X_5258553_MNP [dm6] | TAA | CCC | 1.455e-8 | 5.473e-5 |
INTERGENIC
|
||
| X | 8425238 | X_8425238_DEL [dm3] X_8531205_DEL [dm6] | TTATAC | T | 1.455e-8 | 5.473e-5 |
INTRON
Nrg |
||
| X | 8425245 | X_8425245_SNP [dm3] X_8531212_SNP [dm6] | C | G | 1.455e-8 | 5.473e-5 |
INTRON
Nrg |
||
| X | 8425250 | X_8425250_DEL [dm3] X_8531217_DEL [dm6] | TAT | T | 1.455e-8 | 5.473e-5 |
INTRON
Nrg |
||
| 3R | 18161145 | 3R_18161145_DEL [dm3] 3R_22335423_DEL [dm6] | TTTTCT | T | 1.532e-8 | 5.473e-5 |
INTRON
CG5388 |
||
| 3R | 21237645 | 3R_21237645_SNP [dm3] 3R_25411923_SNP [dm6] | C | G | 1.532e-8 | 5.473e-5 |
INTRON
Fur1 |
||
| 2R | 15577916 | 2R_15577916_SNP [dm3] 2R_19690411_SNP [dm6] | T | A | 1.547e-8 | 5.473e-5 |
UPSTREAM
CG15126 INTERGENIC |
||
| 2R | 9412358 | 2R_9412358_SNP [dm3] 2R_13524853_SNP [dm6] | T | C | 1.547e-8 | 5.473e-5 |
UPSTREAM
CG13332 INTRON Vmat |
TF binding site
mE1_TFBS_cad
|
|
| 3L | 7825689 | 3L_7825689_SNP [dm3] 3L_7832589_SNP [dm6] | A | G | 1.547e-8 | 5.473e-5 |
UTR_5_PRIME
Pdp1 INTRON Pdp1 |
||
| 3R | 15127866 | 3R_15127866_DEL [dm3] 3R_19302144_DEL [dm6] | TTGA | T | 1.547e-8 | 5.473e-5 |
DOWNSTREAM
Dl INTERGENIC |
||
| X | 20801676 | X_20801676_SNP [dm3] X_20930649_SNP [dm6] | T | G | 1.547e-8 | 5.473e-5 |
DOWNSTREAM
CG11227 INTERGENIC |
transposable element
FlyBase
|
|
| X | 20858501 | X_20858501_DEL [dm3] X_20987474_DEL [dm6] | GGACTG | G | 1.547e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2L | 12265068 | 2L_12265068_SNP [dm3] 2L_12265068_SNP [dm6] | C | T | 1.568e-8 | 5.473e-5 |
INTRON
aret |
||
| 2L | 12525011 | 2L_12525011_INS [dm3] 2L_12525011_INS [dm6] | T | TTT | 1.568e-8 | 5.473e-5 |
INTRON
bun |
||
| 2L | 12547595 | 2L_12547595_SNP [dm3] 2L_12547595_SNP [dm6] | A | T | 1.568e-8 | 5.473e-5 |
UPSTREAM
bun INTERGENIC |
TF binding site
mE1_TFBS_HSA
|
|
| 2L | 15556597 | 2L_15556597_SNP [dm3] 2L_15556597_SNP [dm6] | C | T | 1.568e-8 | 5.473e-5 |
INTRON
kek3 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
| 2L | 7508002 | 2L_7508002_SNP [dm3] 2L_7508002_SNP [dm6] | G | T | 1.568e-8 | 5.473e-5 |
INTRON
RapGAP1 |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2R | 10086391 | 2R_10086391_SNP [dm3] 2R_14198886_SNP [dm6] | T | A | 1.568e-8 | 5.473e-5 |
UTR_3_PRIME
VGAT DOWNSTREAM CG30069 |
||
| 2R | 1012470 | 2R_1012470_SNP [dm3] 2R_5124965_SNP [dm6] | G | T | 1.568e-8 | 5.473e-5 |
INTRON
gus |
transposable element
FlyBase
|
|
| 2R | 12343668 | 2R_12343668_SNP [dm3] 2R_16456163_SNP [dm6] | T | A | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2R | 12405106 | 2R_12405106_SNP [dm3] 2R_16517601_SNP [dm6] | G | A | 1.568e-8 | 5.473e-5 |
INTRON
Sema-2a |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2R | 12523457 | 2R_12523457_SNP [dm3] 2R_16635952_SNP [dm6] | A | G | 1.568e-8 | 5.473e-5 |
INTRON
Alk |
TF binding site
BDTNP1_TFBS_dl
|
|
| 2R | 12523461 | 2R_12523461_SNP [dm3] 2R_16635956_SNP [dm6] | T | A | 1.568e-8 | 5.473e-5 |
INTRON
Alk |
TF binding site
BDTNP1_TFBS_dl
|
|
| 2R | 12693525 | 2R_12693525_SNP [dm3] 2R_16806020_SNP [dm6] | A | G | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2R | 14274726 | 2R_14274726_SNP [dm3] 2R_18387221_SNP [dm6] | A | T | 1.568e-8 | 5.473e-5 |
UPSTREAM
IM3 DOWNSTREAM IM2 INTERGENIC |
||
| 2R | 18313065 | 2R_18313065_DEL [dm3] 2R_22425560_DEL [dm6] | GG | G | 1.568e-8 | 5.473e-5 |
DOWNSTREAM
CG10344 & 1 other INTERGENIC |
TF binding site
mE1_TFBS_cad
|
|
| 2R | 18613824 | 2R_18613824_SNP [dm3] 2R_22726319_SNP [dm6] | C | T | 1.568e-8 | 5.473e-5 |
INTRON
jbug |
TF binding site
BDTNP1_TFBS_dl
|
|
| 2R | 18865927 | 2R_18865927_SNP [dm3] 2R_22978404_SNP [dm6] | T | A | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
||
| 2R | 6150428 | 2R_6150428_SNP [dm3] 2R_10262923_SNP [dm6] | T | G | 1.568e-8 | 5.473e-5 |
EXON
CR30009 |
||
| 2R | 7524562 | 2R_7524562_INS [dm3] 2R_11637057_INS [dm6] | T | TT | 1.568e-8 | 5.473e-5 |
INTRON
CG9005 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 10248512 | 3L_10248512_SNP [dm3] 3L_10255412_SNP [dm6] | A | T | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
| 3L | 10491710 | 3L_10491710_SNP [dm3] 3L_10498610_SNP [dm6] | C | G | 1.568e-8 | 5.473e-5 |
INTRON
A2bp1 |
||
| 3L | 10491713 | 3L_10491713_INS [dm3] 3L_10498613_INS [dm6] | T | TTCGCATTCTAAGAAATT... | 1.568e-8 | 5.473e-5 |
INTRON
A2bp1 |
||
| 3L | 10498638 | 3L_10498638_SNP [dm3] 3L_10505538_SNP [dm6] | T | C | 1.568e-8 | 5.473e-5 |
INTRON
A2bp1 |
||
| 3L | 13740285 | 3L_13740285_SNP [dm3] 3L_13747185_SNP [dm6] | T | A | 1.568e-8 | 5.473e-5 |
INTRON
bru-3 |
||
| 3L | 13740286 | 3L_13740286_SNP [dm3] 3L_13747186_SNP [dm6] | T | C | 1.568e-8 | 5.473e-5 |
INTRON
bru-3 |
||
| 3L | 13938563 | 3L_13938563_SNP [dm3] 3L_13945463_SNP [dm6] | C | T | 1.568e-8 | 5.473e-5 |
INTRON
CG32137 |
||
| 3L | 20296914 | 3L_20296914_DEL [dm3] 3L_20303814_DEL [dm6] | AAA | C | 1.568e-8 | 5.473e-5 |
DOWNSTREAM
CG32225 INTRON CG6597 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi
|
|
| 3L | 2419365 | 3L_2419365_SNP [dm3] 3L_2419365_SNP [dm6] | T | A | 1.568e-8 | 5.473e-5 |
INTRON
CG45186 |
||
| 3L | 7741993 | 3L_7741993_SNP [dm3] 3L_7748893_SNP [dm6] | A | G | 1.568e-8 | 5.473e-5 |
UTR_3_PRIME
CG13685 INTRON CG32373 |
||
| 3L | 7742005 | 3L_7742005_SNP [dm3] 3L_7748905_SNP [dm6] | A | G | 1.568e-8 | 5.473e-5 |
UTR_3_PRIME
CG13685 INTRON CG32373 |
||
| 3L | 8245129 | 3L_8245129_SNP [dm3] 3L_8252029_SNP [dm6] | T | G | 1.568e-8 | 5.473e-5 |
INTRON
Dscam4 |
||
| 3R | 14037709 | 3R_14037709_SNP [dm3] 3R_18211987_SNP [dm6] | A | G | 1.568e-8 | 5.473e-5 |
INTRON
CG7985 |
||
| 3R | 19182021 | 3R_19182021_SNP [dm3] 3R_23356299_SNP [dm6] | A | T | 1.568e-8 | 5.473e-5 |
START_GAINED
Sec13 UTR_5_PRIME Sec13 UPSTREAM Sec13 & 1 other |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA
|
|
| 3R | 21249781 | 3R_21249781_SNP [dm3] 3R_25424059_SNP [dm6] | T | G | 1.568e-8 | 5.473e-5 |
INTRON
Fur1 |
||
| 3R | 21337061 | 3R_21337061_SNP [dm3] 3R_25511339_SNP [dm6] | A | T | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
||
| 3R | 21446923 | 3R_21446923_SNP [dm3] 3R_25621201_SNP [dm6] | G | C | 1.568e-8 | 5.473e-5 |
DOWNSTREAM
CG5071 INTRON Npl4 |
||
| 3R | 24308811 | 3R_24308811_SNP [dm3] 3R_28483089_SNP [dm6] | C | A | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
||
| X | 12404397 | X_12404397_SNP [dm3] X_12510364_SNP [dm6] | T | C | 1.568e-8 | 5.473e-5 |
INTRON
CG2556 |
||
| X | 14046497 | X_14046497_SNP [dm3] X_14152464_SNP [dm6] | A | T | 1.568e-8 | 5.473e-5 |
UPSTREAM
CG12479 INTERGENIC |
||
| X | 14680864 | X_14680864_SNP [dm3] X_14786831_SNP [dm6] | T | A | 1.568e-8 | 5.473e-5 |
UPSTREAM
Ag5r DOWNSTREAM rut EXON CR45522 |
||
| X | 16080999 | X_16080999_SNP [dm3] X_16186966_SNP [dm6] | T | C | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA
|
|
| X | 17895388 | X_17895388_SNP [dm3] X_18001355_SNP [dm6] | G | A | 1.568e-8 | 5.473e-5 |
INTRON
Sh |
||
| X | 21656882 | X_21656882_SNP [dm3] X_21785855_SNP [dm6] | A | T | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
||
| X | 4278775 | X_4278775_SNP [dm3] X_4384742_SNP [dm6] | G | T | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
||
| X | 8438255 | X_8438255_SNP [dm3] X_8544222_SNP [dm6] | T | G | 1.568e-8 | 5.473e-5 |
INTRON
Nrg |
||
| X | 8438258 | X_8438258_SNP [dm3] X_8544225_SNP [dm6] | T | C | 1.568e-8 | 5.473e-5 |
INTRON
Nrg |
||
| X | 8521527 | X_8521527_DEL [dm3] X_8627494_DEL [dm6] | GGTAAAATG | G | 1.568e-8 | 5.473e-5 |
INTERGENIC
|
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens |
|
| 2R | 16751479 | 2R_16751479_INS [dm3] 2R_20863974_INS [dm6] | A | AA | 1.769e-8 | 5.998e-5 |
INTRON
CG15227 |
||
| 2R | 18005980 | 2R_18005980_SNP [dm3] 2R_22118475_SNP [dm6] | T | C | 1.769e-8 | 5.998e-5 |
INTRON
Vrp1 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
| 2R | 6670662 | 2R_6670662_DEL [dm3] 2R_10783157_DEL [dm6] | TCAAAATGTCT... | T | 1.769e-8 | 5.998e-5 |
UPSTREAM
CG33144 INTRON CG33144 & 1 other |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 15285315 | 3L_15285315_INS [dm3] 3L_15292215_INS [dm6] | A | AA | 1.769e-8 | 5.998e-5 |
INTERGENIC
|
||
| 3L | 16546720 | 3L_16546720_SNP [dm3] 3L_16553620_SNP [dm6] | T | C | 1.769e-8 | 5.998e-5 |
INTERGENIC
|
||
| 3L | 18418611 | 3L_18418611_SNP [dm3] 3L_18425511_SNP [dm6] | C | G | 1.769e-8 | 5.998e-5 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
| 3L | 9730828 | 3L_9730828_SNP [dm3] 3L_9737728_SNP [dm6] | T | C | 1.769e-8 | 5.998e-5 |
INTRON
CG42268 |
||
| 3R | 2109726 | 3R_2109726_SNP [dm3] 3R_6284004_SNP [dm6] | T | C | 1.769e-8 | 5.998e-5 |
DOWNSTREAM
CG15597 INTERGENIC |
||
| X | 14245372 | X_14245372_INS [dm3] X_14351339_INS [dm6] | A | AA | 1.769e-8 | 5.998e-5 |
INTRON
dpr8 |
||
| X | 14303518 | X_14303518_SNP [dm3] X_14409485_SNP [dm6] | A | G | 1.769e-8 | 5.998e-5 |
INTRON
dpr8 |
||
| X | 20795460 | X_20795460_DEL [dm3] X_20924433_DEL [dm6] | ACA | A | 1.769e-8 | 5.998e-5 |
UPSTREAM
shakB INTRON shakB |
TF binding site
BDTNP1_TFBS_dl
|
|
| 2L | 12477948 | 2L_12477948_SNP [dm3] 2L_12477948_SNP [dm6] | T | G | 1.921e-8 | 6.212e-5 |
INTRON
bun |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
| 2R | 11262496 | 2R_11262496_SNP [dm3] 2R_15374991_SNP [dm6] | A | T | 1.921e-8 | 6.212e-5 |
UPSTREAM
CR43275 DOWNSTREAM CR43186 EXON CR43105 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_zfh1
|
|
| 2R | 12715963 | 2R_12715963_SNP [dm3] 2R_16828458_SNP [dm6] | C | T | 1.921e-8 | 6.212e-5 |
UPSTREAM
CR43650 DOWNSTREAM CG34460 INTERGENIC |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
|
|
| 2R | 15438759 | 2R_15438759_SNP [dm3] 2R_19551254_SNP [dm6] | G | A | 1.921e-8 | 6.212e-5 |
UPSTREAM
CG43111 INTRON sm |
||
| 2R | 15438760 | 2R_15438760_SNP [dm3] 2R_19551255_SNP [dm6] | C | A | 1.921e-8 | 6.212e-5 |
UPSTREAM
CG43111 INTRON sm |
||
| 2R | 15438762 | 2R_15438762_SNP [dm3] 2R_19551257_SNP [dm6] | T | A | 1.921e-8 | 6.212e-5 |
UPSTREAM
CG43111 INTRON sm |
||
| 2R | 15438773 | 2R_15438773_SNP [dm3] 2R_19551268_SNP [dm6] | G | A | 1.921e-8 | 6.212e-5 |
UPSTREAM
CG43111 INTRON sm |
||
| 2R | 17718380 | 2R_17718380_SNP [dm3] 2R_21830875_SNP [dm6] | A | G | 1.921e-8 | 6.212e-5 |
INTRON
CG13492 |
||
| 2R | 4046618 | 2R_4046618_SNP [dm3] 2R_8159113_SNP [dm6] | A | G | 1.921e-8 | 6.212e-5 |
DOWNSTREAM
CR44068 & 2 others INTERGENIC |
||
| 3L | 6695846 | 3L_6695846_SNP [dm3] 3L_6702746_SNP [dm6] | A | T | 1.921e-8 | 6.212e-5 |
INTRON
SP1173 |
TF binding site
BDTNP1_TFBS_twi
|
|
| 3R | 9875350 | 3R_9875350_SNP [dm3] 3R_14049628_SNP [dm6] | G | C | 1.921e-8 | 6.212e-5 |
INTERGENIC
|
||
| X | 17949758 | X_17949758_SNP [dm3] X_18055725_SNP [dm6] | G | A | 1.921e-8 | 6.212e-5 |
INTRON
Sh |
||
| X | 19181106 | X_19181106_INS [dm3] X_19287073_INS [dm6] | A | AATGCTTCGCA... | 1.921e-8 | 6.212e-5 |
INTRON
CG8034 |
TF binding site
BDTNP1_TFBS_twi
|
|
| X | 7669914 | X_7669914_SNP [dm3] X_7775881_SNP [dm6] | A | G | 1.921e-8 | 6.212e-5 |
INTERGENIC
|
||
| X | 7669915 | X_7669915_SNP [dm3] X_7775882_SNP [dm6] | C | T | 1.921e-8 | 6.212e-5 |
INTERGENIC
|
||
| 2L | 22298579 | 2L_22298579_SNP [dm3] 2L_22298579_SNP [dm6] | G | A | 1.978e-8 | 6.212e-5 |
INTERGENIC
|
transposable element
FlyBase
|
|
| 2R | 9515367 | 2R_9515367_SNP [dm3] 2R_13627862_SNP [dm6] | C | A | 1.978e-8 | 6.212e-5 |
INTRON
fas |
||
| X | 20683687 | X_20683687_SNP [dm3] X_20812660_SNP [dm6] | A | G | 1.978e-8 | 6.212e-5 |
INTRON
shakB |
||
| X | 3765631 | X_3765631_SNP [dm3] X_3871598_SNP [dm6] | G | A | 1.978e-8 | 6.212e-5 |
UPSTREAM
CG2930 INTRON yin & 1 other |
TF binding site
mE1_TFBS_cnc mE1_TFBS_HSA
|
|
| 2L | 11020463 | 2L_11020463_SNP [dm3] 2L_11020463_SNP [dm6] | C | A | 2.058e-8 | 6.212e-5 |
INTRON
Samuel |
||
| 2L | 5949172 | 2L_5949172_SNP [dm3] 2L_5949172_SNP [dm6] | C | A | 2.058e-8 | 6.212e-5 |
UPSTREAM
CR44986 & 1 other DOWNSTREAM Gpdh INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx mE1_TFBS_zfh1
|
|
| 2R | 17849615 | 2R_17849615_SNP [dm3] 2R_21962110_SNP [dm6] | C | A | 2.058e-8 | 6.212e-5 |
INTERGENIC
|
||
| 2R | 6133290 | 2R_6133290_SNP [dm3] 2R_10245785_SNP [dm6] | T | A | 2.058e-8 | 6.212e-5 |
UTR_3_PRIME
Hdc DOWNSTREAM CG12209 |
||
| 2R | 6416274 | 2R_6416274_INS [dm3] 2R_10528769_INS [dm6] | T | TAGCATTTGTTGT... | 2.058e-8 | 6.212e-5 |
INTRON
lola |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 11152345 | 3L_11152345_SNP [dm3] 3L_11159245_SNP [dm6] | C | G | 2.058e-8 | 6.212e-5 |
INTRON
CG32082 |
||
| 3L | 14154819 | 3L_14154819_SNP [dm3] 3L_14161719_SNP [dm6] | A | G | 2.058e-8 | 6.212e-5 |
INTERGENIC
|
regulatory region
REDfly_CRMs
|
|
| 3L | 9110421 | 3L_9110421_DEL [dm3] 3L_9117321_DEL [dm6] | TGCAGCTCCTTGCT... | T | 2.058e-8 | 6.212e-5 |
INTRON
bol |
||
| 3L | 9417874 | 3L_9417874_SNP [dm3] 3L_9424774_SNP [dm6] | G | C | 2.058e-8 | 6.212e-5 |
UTR_3_PRIME
aay INTRON CG3967 |
TF binding site
mE1_TFBS_cad
|
|
| 3L | 9488315 | 3L_9488315_DEL [dm3] 3L_9495215_DEL [dm6] | GT | C | 2.058e-8 | 6.212e-5 |
UTR_3_PRIME
path |
||
| 3R | 10790020 | 3R_10790020_SNP [dm3] 3R_14964298_SNP [dm6] | T | G | 2.058e-8 | 6.212e-5 |
INTERGENIC
|
||
| 3R | 3225795 | 3R_3225795_SNP [dm3] 3R_7400073_SNP [dm6] | A | T | 2.058e-8 | 6.212e-5 |
INTERGENIC
|
||
| 4 | 798906 | 4_798906_DEL [dm3] 4_778280_DEL [dm6] | AA | A | 2.058e-8 | 6.212e-5 |
DOWNSTREAM
MED26 INTERGENIC |
||
| X | 14288989 | X_14288989_SNP [dm3] X_14394956_SNP [dm6] | C | A | 2.058e-8 | 6.212e-5 |
INTRON
dpr8 |
||
| 2L | 16061009 | 2L_16061009_SNP [dm3] 2L_16061009_SNP [dm6] | G | A | 2.167e-8 | 6.212e-5 |
INTRON
beat-Ia |
||
| 2L | 16061010 | 2L_16061010_SNP [dm3] 2L_16061010_SNP [dm6] | T | A | 2.167e-8 | 6.212e-5 |
INTRON
beat-Ia |
||
| 2L | 16061012 | 2L_16061012_SNP [dm3] 2L_16061012_SNP [dm6] | C | G | 2.167e-8 | 6.212e-5 |
INTRON
beat-Ia |
||
| 2L | 4175308 | 2L_4175308_SNP [dm3] 2L_4175308_SNP [dm6] | T | C | 2.167e-8 | 6.212e-5 |
INTERGENIC
|
||
| 2R | 6758340 | 2R_6758340_SNP [dm3] 2R_10870835_SNP [dm6] | A | G | 2.167e-8 | 6.212e-5 |
INTRON
CG30015 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
|
|
| 3L | 5966700 | 3L_5966700_SNP [dm3] 3L_5973600_SNP [dm6] | G | T | 2.167e-8 | 6.212e-5 |
INTRON
CG10479 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
|
|
| 3R | 7816312 | 3R_7816312_SNP [dm3] 3R_11990590_SNP [dm6] | A | G | 2.167e-8 | 6.212e-5 |
UPSTREAM
mfas INTRON mfas |
||
| X | 11559660 | X_11559660_DEL [dm3] X_11665627_DEL [dm6] | AA | A | 2.167e-8 | 6.212e-5 |
INTRON
Ptp10D |
||
| X | 15433553 | X_15433553_DEL [dm3] X_15539520_DEL [dm6] | GTTG | G | 2.167e-8 | 6.212e-5 |
UTR_5_PRIME
Ac13E |
||
| X | 19614972 | X_19614972_SNP [dm3] X_19720939_SNP [dm6] | C | A | 2.167e-8 | 6.212e-5 |
INTRON
CG12531 |
||
| 2L | 17393922 | 2L_17393922_SNP [dm3] 2L_17393922_SNP [dm6] | A | C | 2.218e-8 | 6.212e-5 |
INTRON
CLIP-190 |
||
| 2L | 17765145 | 2L_17765145_SNP [dm3] 2L_17765145_SNP [dm6] | A | G | 2.218e-8 | 6.212e-5 |
INTRON
CadN |
||
| 2L | 17887247 | 2L_17887247_SNP [dm3] 2L_17887247_SNP [dm6] | A | G | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
||
| 2L | 3421927 | 2L_3421927_SNP [dm3] 2L_3421927_SNP [dm6] | C | T | 2.218e-8 | 6.212e-5 |
INTRON
pgant2 |
||
| 2L | 3488818 | 2L_3488818_SNP [dm3] 2L_3488818_SNP [dm6] | C | T | 2.218e-8 | 6.212e-5 |
INTRON
CG15414 |
||
| 2L | 9422130 | 2L_9422130_SNP [dm3] 2L_9422130_SNP [dm6] | G | C | 2.218e-8 | 6.212e-5 |
INTRON
Mco1 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2L | 9440195 | 2L_9440195_SNP [dm3] 2L_9440195_SNP [dm6] | T | A | 2.218e-8 | 6.212e-5 |
INTRON
numb & 1 other |
||
| 2L | 9440197 | 2L_9440197_DEL [dm3] 2L_9440197_DEL [dm6] | AATATAGGT | C | 2.218e-8 | 6.212e-5 |
INTRON
numb & 1 other |
||
| 2L | 9440210 | 2L_9440210_SNP [dm3] 2L_9440210_SNP [dm6] | C | T | 2.218e-8 | 6.212e-5 |
INTRON
numb & 1 other |
||
| 2R | 15360088 | 2R_15360088_DEL [dm3] 2R_19472583_DEL [dm6] | TT | T | 2.218e-8 | 6.212e-5 |
INTRON
par-1 |
||
| 2R | 19130457 | 2R_19130457_SNP [dm3] 2R_23242934_SNP [dm6] | A | C | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi
|
|
| 2R | 19827346 | 2R_19827346_SNP [dm3] 2R_23939823_SNP [dm6] | T | G | 2.218e-8 | 6.212e-5 |
UPSTREAM
Tal & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
| 2R | 19827347 | 2R_19827347_SNP [dm3] 2R_23939824_SNP [dm6] | T | C | 2.218e-8 | 6.212e-5 |
UPSTREAM
Tal & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
| 2R | 6150232 | 2R_6150232_SNP [dm3] 2R_10262727_SNP [dm6] | T | C | 2.218e-8 | 6.212e-5 |
EXON
CR30009 |
||
| 2R | 8543983 | 2R_8543983_SNP [dm3] 2R_12656478_SNP [dm6] | C | A | 2.218e-8 | 6.212e-5 |
DOWNSTREAM
ZnT49B INTRON CG8646 |
||
| 2R | 8757278 | 2R_8757278_SNP [dm3] 2R_12869773_SNP [dm6] | A | G | 2.218e-8 | 6.212e-5 |
UPSTREAM
bic & 1 other EXON CR45140 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
|
|
| 3L | 11372049 | 3L_11372049_SNP [dm3] 3L_11378949_SNP [dm6] | C | G | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
||
| 3L | 11372064 | 3L_11372064_SNP [dm3] 3L_11378964_SNP [dm6] | C | A | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
||
| 3L | 11678348 | 3L_11678348_SNP [dm3] 3L_11685248_SNP [dm6] | A | G | 2.218e-8 | 6.212e-5 |
INTRON
Sug |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
|
|
| 3L | 12026148 | 3L_12026148_SNP [dm3] 3L_12033048_SNP [dm6] | C | T | 2.218e-8 | 6.212e-5 |
DOWNSTREAM
CG43993 INTRON rols |
||
| 3L | 14415429 | 3L_14415429_SNP [dm3] 3L_14422329_SNP [dm6] | C | G | 2.218e-8 | 6.212e-5 |
INTRON
bbg |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 18496528 | 3L_18496528_INS [dm3] 3L_18503428_INS [dm6] | G | GCT | 2.218e-8 | 6.212e-5 |
UPSTREAM
AstC-R2 INTERGENIC |
||
| 3L | 22854871 | 3L_22854871_SNP [dm3] 3L_22861771_SNP [dm6] | C | G | 2.218e-8 | 6.212e-5 |
DOWNSTREAM
CG13239 INTERGENIC |
||
| 3L | 24297279 | 3L_24297279_SNP [dm3] 3L_24304179_SNP [dm6] | T | A | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
||
| 3L | 3252345 | 3L_3252345_SNP [dm3] 3L_3252345_SNP [dm6] | A | T | 2.218e-8 | 6.212e-5 |
EXON
CR43626 |
||
| 3L | 4312050 | 3L_4312050_SNP [dm3] 3L_4312050_SNP [dm6] | G | A | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
||
| 3L | 6224493 | 3L_6224493_DEL [dm3] 3L_6231393_DEL [dm6] | ATATTAAGCAAAGAAGGAAA... | A | 2.218e-8 | 6.212e-5 |
DOWNSTREAM
CG13299 INTERGENIC |
||
| 3L | 6224532 | 3L_6224532_SNP [dm3] 3L_6231432_SNP [dm6] | G | T | 2.218e-8 | 6.212e-5 |
DOWNSTREAM
CG13299 INTERGENIC |
||
| 3L | 6224533 | 3L_6224533_SNP [dm3] 3L_6231433_SNP [dm6] | C | A | 2.218e-8 | 6.212e-5 |
DOWNSTREAM
CG13299 INTERGENIC |
||
| 3L | 6461161 | 3L_6461161_SNP [dm3] 3L_6468061_SNP [dm6] | A | T | 2.218e-8 | 6.212e-5 |
INTRON
CG42747 |
TF binding site
mE1_TFBS_cad
|
|
| 3R | 3470170 | 3R_3470170_SNP [dm3] 3R_7644448_SNP [dm6] | C | T | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
||
| X | 11335234 | X_11335234_SNP [dm3] X_11441201_SNP [dm6] | A | T | 2.218e-8 | 6.212e-5 |
INTRON
Evi5 |
||
| X | 15529014 | X_15529014_SNP [dm3] X_15634981_SNP [dm6] | A | G | 2.218e-8 | 6.212e-5 |
INTERGENIC
|
||
| X | 19224859 | X_19224859_SNP [dm3] X_19330826_SNP [dm6] | C | T | 2.218e-8 | 6.212e-5 |
INTRON
nAChRalpha7 |
transposable element
FlyBase
|
|
| X | 19224861 | X_19224861_SNP [dm3] X_19330828_SNP [dm6] | A | T | 2.218e-8 | 6.212e-5 |
INTRON
nAChRalpha7 |
transposable element
FlyBase
|
|
| X | 19436351 | X_19436351_SNP [dm3] X_19542318_SNP [dm6] | T | C | 2.218e-8 | 6.212e-5 |
INTRON
CG32532 |
||
| X | 20894296 | X_20894296_SNP [dm3] X_21023269_SNP [dm6] | C | G | 2.218e-8 | 6.212e-5 |
DOWNSTREAM
r-cup INTERGENIC |
||
| X | 9692550 | X_9692550_DEL [dm3] X_9798517_DEL [dm6] | CATGT | C | 2.218e-8 | 6.212e-5 |
INTRON
CG32698 |
||
| 2L | 19408869 | 2L_19408869_SNP [dm3] 2L_19408869_SNP [dm6] | G | A | 2.341e-8 | 6.444e-5 |
INTRON
Pax |
||
| 2R | 18033909 | 2R_18033909_SNP [dm3] 2R_22146404_SNP [dm6] | A | G | 2.341e-8 | 6.444e-5 |
INTRON
a |
||
| 3L | 10885936 | 3L_10885936_DEL [dm3] 3L_10892836_DEL [dm6] | GTGGGCGTA | G | 2.341e-8 | 6.444e-5 |
DOWNSTREAM
Cpr67Fa2 & 1 other INTERGENIC |
||
| 3L | 3780410 | 3L_3780410_SNP [dm3] 3L_3780410_SNP [dm6] | C | A | 2.341e-8 | 6.444e-5 |
INTRON
CG32264 |
TF binding site
mE1_TFBS_chinmo
|
|
| 3R | 10880903 | 3R_10880903_SNP [dm3] 3R_15055181_SNP [dm6] | A | G | 2.341e-8 | 6.444e-5 |
UTR_3_PRIME
dpr9 |
||
| 3R | 13239367 | 3R_13239367_INS [dm3] 3R_17413645_INS [dm6] | T | TT | 2.341e-8 | 6.444e-5 |
UPSTREAM
CG42822 DOWNSTREAM CG5863 & 1 other INTERGENIC |
||
| 3R | 13409835 | 3R_13409835_DEL [dm3] 3R_17584113_DEL [dm6] | AA | A | 2.341e-8 | 6.444e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
|
|
| X | 14918105 | X_14918105_INS [dm3] X_15024072_INS [dm6] | A | AATAAATAA | 2.341e-8 | 6.444e-5 |
UPSTREAM
be INTRON hiw |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 2L | 14609543 | 2L_14609543_SNP [dm3] 2L_14609543_SNP [dm6] | G | T | 2.521e-8 | 6.912e-5 |
INTRON
osp |
||
| X | 8951219 | X_8951219_SNP [dm3] X_9057186_SNP [dm6] | T | C | 2.521e-8 | 6.912e-5 |
SYNONYMOUS_CODING
CG15365 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_chinmo
|
|
| 3L | 10845119 | 3L_10845119_SNP [dm3] 3L_10852019_SNP [dm6] | T | G | 2.588e-8 | 6.935e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 10845130 | 3L_10845130_SNP [dm3] 3L_10852030_SNP [dm6] | C | T | 2.588e-8 | 6.935e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| 3L | 16040968 | 3L_16040968_SNP [dm3] 3L_16047868_SNP [dm6] | T | G | 2.588e-8 | 6.935e-5 |
INTRON
th |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
|
|
| 3L | 2410664 | 3L_2410664_INS [dm3] 3L_2410664_INS [dm6] | G | GAGGAG | 2.588e-8 | 6.935e-5 |
INTRON
CG45186 |
||
| 3R | 10057941 | 3R_10057941_SNP [dm3] 3R_14232219_SNP [dm6] | A | G | 2.588e-8 | 6.935e-5 |
INTERGENIC
|
||
| 3R | 10153576 | 3R_10153576_SNP [dm3] 3R_14327854_SNP [dm6] | G | A | 2.588e-8 | 6.935e-5 |
UPSTREAM
spn-B DOWNSTREAM CG3321 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Ubx
|
|
| 3R | 10534399 | 3R_10534399_SNP [dm3] 3R_14708677_SNP [dm6] | G | A | 2.588e-8 | 6.935e-5 |
INTRON
kibra |
||
| 3R | 16900822 | 3R_16900822_SNP [dm3] 3R_21075100_SNP [dm6] | T | C | 2.588e-8 | 6.935e-5 |
INTRON
dmrt93B |
||
| 3R | 26654428 | 3R_26654428_SNP [dm3] 3R_30828706_SNP [dm6] | G | T | 2.588e-8 | 6.935e-5 |
INTRON
CG15544 |
||
| 3R | 26654432 | 3R_26654432_SNP [dm3] 3R_30828710_SNP [dm6] | T | A | 2.588e-8 | 6.935e-5 |
INTRON
CG15544 |
||
| X | 8810505 | X_8810505_SNP [dm3] X_8916472_SNP [dm6] | T | A | 2.588e-8 | 6.935e-5 |
INTRON
rdgA |
||
| 2R | 2103360 | 2R_2103360_SNP [dm3] 2R_6215855_SNP [dm6] | T | A | 2.825e-8 | 7.240e-5 |
DOWNSTREAM
CR44161 INTRON bin3 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| 2R | 4914417 | 2R_4914417_SNP [dm3] 2R_9026912_SNP [dm6] | A | C | 2.825e-8 | 7.240e-5 |
INTRON
CG8170 |
||
| 3L | 14706577 | 3L_14706577_SNP [dm3] 3L_14713477_SNP [dm6] | C | G | 2.825e-8 | 7.240e-5 |
INTRON
ome |
||
| 3L | 16210165 | 3L_16210165_SNP [dm3] 3L_16217065_SNP [dm6] | C | T | 2.825e-8 | 7.240e-5 |
INTRON
CG13073 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 16210166 | 3L_16210166_SNP [dm3] 3L_16217066_SNP [dm6] | C | G | 2.825e-8 | 7.240e-5 |
INTRON
CG13073 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 16288280 | 3L_16288280_INS [dm3] 3L_16295180_INS [dm6] | C | CTAGGGGAGCGGCATGGAC... | 2.825e-8 | 7.240e-5 |
CODON_INSERTION
CG4962 |
TF binding site
mE1_TFBS_chinmo
|
|
| 3L | 16533983 | 3L_16533983_INS [dm3] 3L_16540883_INS [dm6] | T | TAT | 2.825e-8 | 7.240e-5 |
INTRON
CG43373 |
||
| 3R | 10860552 | 3R_10860552_SNP [dm3] 3R_15034830_SNP [dm6] | A | G | 2.825e-8 | 7.240e-5 |
INTERGENIC
|
||
| 3R | 21196283 | 3R_21196283_SNP [dm3] 3R_25370561_SNP [dm6] | C | A | 2.825e-8 | 7.240e-5 |
INTRON
Fur1 |
TF binding site
mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
|
|
| 3R | 9855654 | 3R_9855654_SNP [dm3] 3R_14029932_SNP [dm6] | C | A | 2.825e-8 | 7.240e-5 |
INTRON
rdx & 1 other |
TF binding site
BDTNP1_TFBS_dl
|
|
| X | 11600344 | X_11600344_SNP [dm3] X_11706311_SNP [dm6] | T | G | 2.825e-8 | 7.240e-5 |
DOWNSTREAM
FucT6 INTERGENIC |
||
| X | 21927413 | X_21927413_SNP [dm3] X_22525577_SNP [dm6] | T | G | 2.825e-8 | 7.240e-5 |
INTRON
CG17600 |
||
| 2L | 22001210 | 2L_22001210_SNP [dm3] 2L_22001210_SNP [dm6] | A | C | 2.829e-8 | 7.240e-5 |
UPSTREAM
CR44916 INTERGENIC |
||
| 2L | 6003277 | 2L_6003277_SNP [dm3] 2L_6003277_SNP [dm6] | T | A | 2.829e-8 | 7.240e-5 |
UTR_3_PRIME
Tsp26A UPSTREAM CR43866 DOWNSTREAM Gal |
||
| 2R | 17486612 | 2R_17486612_SNP [dm3] 2R_21599107_SNP [dm6] | A | C | 2.829e-8 | 7.240e-5 |
INTERGENIC
|
||
| 2R | 8493277 | 2R_8493277_SNP [dm3] 2R_12605772_SNP [dm6] | T | C | 2.829e-8 | 7.240e-5 |
INTRON
Amph |
||
| 3L | 11575414 | 3L_11575414_INS [dm3] 3L_11582314_INS [dm6] | T | TC | 2.829e-8 | 7.240e-5 |
UPSTREAM
CG33269 DOWNSTREAM CG32086 INTERGENIC |
||
| 3L | 13083268 | 3L_13083268_SNP [dm3] 3L_13090168_SNP [dm6] | G | A | 2.829e-8 | 7.240e-5 |
UPSTREAM
CG11251 INTERGENIC |
||
| 3L | 13479738 | 3L_13479738_SNP [dm3] 3L_13486638_SNP [dm6] | G | A | 2.829e-8 | 7.240e-5 |
UPSTREAM
Tgi & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
| 3L | 18181457 | 3L_18181457_INS [dm3] 3L_18188357_INS [dm6] | A | AA | 2.829e-8 | 7.240e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad
|
|
| 3L | 22504904 | 3L_22504904_SNP [dm3] 3L_22511804_SNP [dm6] | G | A | 2.829e-8 | 7.240e-5 |
DOWNSTREAM
CR45429 INTERGENIC |
||
| X | 20331980 | X_20331980_INS [dm3] X_20460953_INS [dm6] | A | ACGGACAGA | 2.829e-8 | 7.240e-5 |
INTRON
CG32506 |
transposable element
FlyBase
|
|
| X | 8634499 | X_8634499_SNP [dm3] X_8740466_SNP [dm6] | A | G | 2.829e-8 | 7.240e-5 |
INTERGENIC
|
||
| 3L | 14951309 | 3L_14951309_SNP [dm3] 3L_14958209_SNP [dm6] | A | G | 2.911e-8 | 7.420e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
|
|
| 3R | 22873833 | 3R_22873833_SNP [dm3] 3R_27048111_SNP [dm6] | G | C | 2.911e-8 | 7.420e-5 |
INTRON
RYa-R |
||
| 3L | 7633460 | 3L_7633460_SNP [dm3] 3L_7640360_SNP [dm6] | G | A | 2.951e-8 | 7.492e-5 |
DOWNSTREAM
CG33275 & 2 others INTRON CG33276 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
| X | 13734520 | X_13734520_SNP [dm3] X_13840487_SNP [dm6] | C | T | 2.951e-8 | 7.492e-5 |
UPSTREAM
AMPdeam INTRON AMPdeam |
||
| 2R | 12611800 | 2R_12611800_INS [dm3] 2R_16724295_INS [dm6] | C | CC | 2.963e-8 | 7.507e-5 |
INTRON
CG30463 |
||
| 2L | 11677556 | 2L_11677556_DEL [dm3] 2L_11677556_DEL [dm6] | AA | A | 3.094e-8 | 7.648e-5 |
INTERGENIC
|
||
| 2L | 4786789 | 2L_4786789_SNP [dm3] 2L_4786789_SNP [dm6] | A | G | 3.094e-8 | 7.648e-5 |
INTRON
CG15630 |
||
| 2R | 10480419 | 2R_10480419_SNP [dm3] 2R_14592914_SNP [dm6] | C | G | 3.094e-8 | 7.648e-5 |
INTRON
CG12869 |
TF binding site
mE1_TFBS_cad
|
|
| 2R | 12530300 | 2R_12530300_SNP [dm3] 2R_16642795_SNP [dm6] | G | C | 3.094e-8 | 7.648e-5 |
INTRON
gprs |
||
| 2R | 18018269 | 2R_18018269_SNP [dm3] 2R_22130764_SNP [dm6] | G | A | 3.094e-8 | 7.648e-5 |
SYNONYMOUS_CODING
CG34205 DOWNSTREAM NtR |
TF binding site
mE1_TFBS_chinmo
|
|
| 2R | 4123692 | 2R_4123692_SNP [dm3] 2R_8236187_SNP [dm6] | A | G | 3.094e-8 | 7.648e-5 |
INTERGENIC
|
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr |
|
| 3L | 13836382 | 3L_13836382_SNP [dm3] 3L_13843282_SNP [dm6] | A | G | 3.094e-8 | 7.648e-5 |
UPSTREAM
Tsp68C & 1 other INTERGENIC |
||
| 3L | 17044126 | 3L_17044126_INS [dm3] 3L_17051026_INS [dm6] | T | TT | 3.094e-8 | 7.648e-5 |
UPSTREAM
rogdi INTRON rogdi |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_run
|
|
| 3R | 11271844 | 3R_11271844_SNP [dm3] 3R_15446122_SNP [dm6] | A | G | 3.094e-8 | 7.648e-5 |
INTRON
AdamTS-A |
||
| 3R | 8489852 | 3R_8489852_SNP [dm3] 3R_12664130_SNP [dm6] | A | C | 3.094e-8 | 7.648e-5 |
UPSTREAM
CG14395 INTRON CG14395 |
||
| X | 13172844 | X_13172844_SNP [dm3] X_13278811_SNP [dm6] | T | C | 3.094e-8 | 7.648e-5 |
INTRON
HDAC4 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
|
|
| X | 16429771 | X_16429771_SNP [dm3] X_16535738_SNP [dm6] | G | A | 3.094e-8 | 7.648e-5 |
INTERGENIC
|
||
| X | 8507716 | X_8507716_DEL [dm3] X_8613683_DEL [dm6] | AA | A | 3.094e-8 | 7.648e-5 |
INTERGENIC
|
||
| 3R | 15917641 | 3R_15917641_SNP [dm3] 3R_20091919_SNP [dm6] | A | G | 3.255e-8 | 7.897e-5 |
INTERGENIC
|
||
| 2L | 4154259 | 2L_4154259_SNP [dm3] 2L_4154259_SNP [dm6] | C | A | 3.274e-8 | 7.897e-5 |
INTERGENIC
|
||
| 2R | 2413954 | 2R_2413954_DEL [dm3] 2R_6526449_DEL [dm6] | ATCGTTAAAA | A | 3.274e-8 | 7.897e-5 |
INTRON
jing |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med mE1_TFBS_cad
transposable element FlyBase |
|
| 2R | 8723852 | 2R_8723852_SNP [dm3] 2R_12836347_SNP [dm6] | A | G | 3.274e-8 | 7.897e-5 |
INTERGENIC
|
||
| 3L | 2036509 | 3L_2036509_SNP [dm3] 3L_2036509_SNP [dm6] | T | C | 3.274e-8 | 7.897e-5 |
DOWNSTREAM
CG42355 INTERGENIC |
||
| 3L | 22407861 | 3L_22407861_SNP [dm3] 3L_22414761_SNP [dm6] | C | G | 3.274e-8 | 7.897e-5 |
INTERGENIC
|
||
| 3L | 3469844 | 3L_3469844_SNP [dm3] 3L_3469844_SNP [dm6] | G | A | 3.274e-8 | 7.897e-5 |
INTRON
CG14971 |
||
| 3R | 12040886 | 3R_12040886_SNP [dm3] 3R_16215164_SNP [dm6] | C | T | 3.274e-8 | 7.897e-5 |
DOWNSTREAM
CR45641 INTERGENIC |
||
| 3R | 12040889 | 3R_12040889_SNP [dm3] 3R_16215167_SNP [dm6] | A | T | 3.274e-8 | 7.897e-5 |
DOWNSTREAM
CR45641 INTERGENIC |
||
| 3R | 16977728 | 3R_16977728_SNP [dm3] 3R_21152006_SNP [dm6] | T | G | 3.274e-8 | 7.897e-5 |
INTRON
SNF4Agamma |
||
| X | 12293711 | X_12293711_SNP [dm3] X_12399678_SNP [dm6] | G | A | 3.274e-8 | 7.897e-5 |
INTERGENIC
|
||
| X | 1629805 | X_1629805_SNP [dm3] X_1735772_SNP [dm6] | T | C | 3.274e-8 | 7.897e-5 |
DOWNSTREAM
Scgdelta INTERGENIC |
||
| X | 9107602 | X_9107602_SNP [dm3] X_9213569_SNP [dm6] | C | T | 3.274e-8 | 7.897e-5 |
INTERGENIC
|
||
| 2R | 8658733 | 2R_8658733_SNP [dm3] 2R_12771228_SNP [dm6] | C | G | 3.342e-8 | 8.018e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_twi
|
|
| X | 16767370 | X_16767370_INS [dm3] X_16873337_INS [dm6] | A | AAGTA | 3.342e-8 | 8.018e-5 |
INTRON
CG13003 |
||
| X | 16767380 | X_16767380_SNP [dm3] X_16873347_SNP [dm6] | T | C | 3.342e-8 | 8.018e-5 |
INTRON
CG13003 |
||
| 2R | 19022055 | 2R_19022055_SNP [dm3] 2R_23134532_SNP [dm6] | C | T | 3.472e-8 | 8.194e-5 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA
|
|
| 2R | 8605577 | 2R_8605577_SNP [dm3] 2R_12718072_SNP [dm6] | T | C | 3.472e-8 | 8.194e-5 |
INTRON
CG42663 |
TF binding site
BDTNP1_TFBS_sna mE1_TFBS_HSA
|
|
| 3L | 14805289 | 3L_14805289_SNP [dm3] 3L_14812189_SNP [dm6] | T | C | 3.472e-8 | 8.194e-5 |
INTRON
CG17839 |
||
| 3L | 510048 | 3L_510048_SNP [dm3] 3L_510048_SNP [dm6] | A | T | 3.472e-8 | 8.194e-5 |
INTRON
klar |
||
| 3L | 510062 | 3L_510062_SNP [dm3] 3L_510062_SNP [dm6] | T | C | 3.472e-8 | 8.194e-5 |
INTRON
klar |
||
| 3L | 6456873 | 3L_6456873_SNP [dm3] 3L_6463773_SNP [dm6] | G | C | 3.472e-8 | 8.194e-5 |
INTRON
CG42747 |
TF binding site
BDTNP1_TFBS_twi
|
|
| 3R | 11515391 | 3R_11515391_SNP [dm3] 3R_15689669_SNP [dm6] | C | G | 3.472e-8 | 8.194e-5 |
UTR_3_PRIME
pxb |
||
| 3R | 12040906 | 3R_12040906_SNP [dm3] 3R_16215184_SNP [dm6] | C | A | 3.472e-8 | 8.194e-5 |
DOWNSTREAM
CR45641 INTERGENIC |
||
| X | 15246073 | X_15246073_SNP [dm3] X_15352040_SNP [dm6] | A | G | 3.472e-8 | 8.194e-5 |
DOWNSTREAM
acj6 INTRON acj6 |
||
| 2L | 6157263 | 2L_6157263_SNP [dm3] 2L_6157263_SNP [dm6] | G | C | 4.001e-8 | 9.409e-5 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 3L | 2620140 | 3L_2620140_INS [dm3] 3L_2620140_INS [dm6] | T | TTGGTTTGGTTTGGGTT... | 4.001e-8 | 9.409e-5 |
INTRON
Pxn |
||
| 2R | 16619346 | 2R_16619346_SNP [dm3] 2R_20731841_SNP [dm6] | G | T | 4.511e-8 | 1.046e-4 |
INTRON
dpr |
||
| 3L | 10196111 | 3L_10196111_SNP [dm3] 3L_10203011_SNP [dm6] | A | G | 4.511e-8 | 1.046e-4 |
INTERGENIC
|
||
| 3L | 14384071 | 3L_14384071_SNP [dm3] 3L_14390971_SNP [dm6] | T | C | 4.511e-8 | 1.046e-4 |
INTERGENIC
|
||
| 3L | 14384075 | 3L_14384075_SNP [dm3] 3L_14390975_SNP [dm6] | A | T | 4.511e-8 | 1.046e-4 |
INTERGENIC
|
||
| 3L | 9774835 | 3L_9774835_SNP [dm3] 3L_9781735_SNP [dm6] | G | A | 4.511e-8 | 1.046e-4 |
SYNONYMOUS_CODING
CG8177 DOWNSTREAM CG8177 INTRON CG8177 |
||
| 3R | 18883514 | 3R_18883514_SNP [dm3] 3R_23057792_SNP [dm6] | A | C | 4.511e-8 | 1.046e-4 |
UPSTREAM
CG17119 DOWNSTREAM sav INTRON CG17119 |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| 3R | 20281297 | 3R_20281297_DEL [dm3] 3R_24455575_DEL [dm6] | AATGAA | A | 4.511e-8 | 1.046e-4 |
INTRON
nAChRalpha1 |
||
| X | 14303239 | X_14303239_SNP [dm3] X_14409206_SNP [dm6] | G | C | 4.511e-8 | 1.046e-4 |
INTRON
dpr8 |
||
| 3L | 21765061 | 3L_21765061_SNP [dm3] 3L_21771961_SNP [dm6] | A | T | 4.597e-8 | 1.062e-4 |
DOWNSTREAM
CG7370 INTRON CG42689 |
||
| 3R | 17321579 | 3R_17321579_SNP [dm3] 3R_21495857_SNP [dm6] | G | C | 4.597e-8 | 1.062e-4 |
INTERGENIC
|
||
| 2L | 2598557 | 2L_2598557_SNP [dm3] 2L_2598557_SNP [dm6] | T | C | 4.705e-8 | 1.077e-4 |
DOWNSTREAM
CR44790 INTERGENIC |
||
| 2R | 15015563 | 2R_15015563_SNP [dm3] 2R_19128058_SNP [dm6] | A | G | 4.705e-8 | 1.077e-4 |
UPSTREAM
CG15117 INTRON CG15117 |
||
| 2R | 19126641 | 2R_19126641_SNP [dm3] 2R_23239118_SNP [dm6] | C | A | 4.705e-8 | 1.077e-4 |
INTERGENIC
|
||
| 3L | 12258018 | 3L_12258018_SNP [dm3] 3L_12264918_SNP [dm6] | C | A | 4.705e-8 | 1.077e-4 |
SPLICE_SITE_REGION
app INTRON app |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
| 3L | 641914 | 3L_641914_DEL [dm3] 3L_641914_DEL [dm6] | TT | T | 4.705e-8 | 1.077e-4 |
UPSTREAM
ban EXON CR43334 |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_dl |
|
| 2R | 1350169 | 2R_1350169_SNP [dm3] 2R_5462664_SNP [dm6] | T | G | 4.834e-8 | 1.097e-4 |
INTERGENIC
|
transposable element
FlyBase
|
|
| 3L | 11177656 | 3L_11177656_SNP [dm3] 3L_11184556_SNP [dm6] | A | T | 4.834e-8 | 1.097e-4 |
INTRON
GlcAT-P |
||
| 3L | 11177658 | 3L_11177658_SNP [dm3] 3L_11184558_SNP [dm6] | A | T | 4.834e-8 | 1.097e-4 |
INTRON
GlcAT-P |
||
| X | 12375396 | X_12375396_SNP [dm3] X_12481363_SNP [dm6] | T | A | 4.834e-8 | 1.097e-4 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA
|
|
| X | 22325740 | X_22325740_SNP [dm3] X_22923904_SNP [dm6] | G | T | 4.834e-8 | 1.097e-4 |
INTERGENIC
|
transposable element
FlyBase
|
|
| 3L | 15048777 | 3L_15048777_SNP [dm3] 3L_15055677_SNP [dm6] | A | T | 4.901e-8 | 1.099e-4 |
DOWNSTREAM
CG13463 INTRON Sytbeta |
||
| 3L | 6303062 | 3L_6303062_DEL [dm3] 3L_6309962_DEL [dm6] | AA | A | 4.901e-8 | 1.099e-4 |
INTERGENIC
|
||
| 3R | 10650415 | 3R_10650415_SNP [dm3] 3R_14824693_SNP [dm6] | A | T | 4.901e-8 | 1.099e-4 |
INTRON
btsz |
||
| X | 19186068 | X_19186068_SNP [dm3] X_19292035_SNP [dm6] | T | C | 4.901e-8 | 1.099e-4 |
INTRON
CG8034 |
||
| X | 8346523 | X_8346523_SNP [dm3] X_8452490_SNP [dm6] | A | T | 4.901e-8 | 1.099e-4 |
INTRON
org-1 |
TF binding site
mE1_TFBS_cad
|
|
| X | 8346526 | X_8346526_SNP [dm3] X_8452493_SNP [dm6] | A | C | 4.901e-8 | 1.099e-4 |
INTRON
org-1 |
TF binding site
mE1_TFBS_cad
|
|
| X | 8346536 | X_8346536_SNP [dm3] X_8452503_SNP [dm6] | A | T | 4.901e-8 | 1.099e-4 |
INTRON
org-1 |
TF binding site
mE1_TFBS_cad
|
|
| 2L | 13641908 | 2L_13641908_SNP [dm3] 2L_13641908_SNP [dm6] | T | A | 7.486e-8 | 1.645e-4 |
UPSTREAM
ics & 1 other INTRON ics |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad
|
|
| 2L | 1415063 | 2L_1415063_SNP [dm3] 2L_1415063_SNP [dm6] | A | G | 7.486e-8 | 1.645e-4 |
INTRON
lea |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 3L | 12538826 | 3L_12538826_SNP [dm3] 3L_12545726_SNP [dm6] | G | T | 7.486e-8 | 1.645e-4 |
INTRON
sowah |
||
| 3L | 17977857 | 3L_17977857_SNP [dm3] 3L_17984757_SNP [dm6] | G | A | 7.486e-8 | 1.645e-4 |
INTRON
Eip75B |
||
| 3L | 17977870 | 3L_17977870_SNP [dm3] 3L_17984770_SNP [dm6] | G | T | 7.486e-8 | 1.645e-4 |
INTRON
Eip75B |
||
| 3L | 18563073 | 3L_18563073_SNP [dm3] 3L_18569973_SNP [dm6] | T | C | 7.486e-8 | 1.645e-4 |
INTRON
AstC-R1 |
||
| 3L | 22990054 | 3L_22990054_SNP [dm3] 3L_22996954_SNP [dm6] | T | G | 7.486e-8 | 1.645e-4 |
INTERGENIC
|
||
| 3L | 22990056 | 3L_22990056_DEL [dm3] 3L_22996956_DEL [dm6] | AA | A | 7.486e-8 | 1.645e-4 |
INTERGENIC
|
||
| 3L | 3759759 | 3L_3759759_SNP [dm3] 3L_3759759_SNP [dm6] | C | A | 7.486e-8 | 1.645e-4 |
UPSTREAM
CG32264 INTRON CG32264 |
TF binding site
mE1_TFBS_HSA
|
|
| 3L | 4510269 | 3L_4510269_SNP [dm3] 3L_4510269_SNP [dm6] | A | C | 7.486e-8 | 1.645e-4 |
DOWNSTREAM
Tie INTERGENIC |
||
| 3R | 13360683 | 3R_13360683_SNP [dm3] 3R_17534961_SNP [dm6] | A | T | 7.486e-8 | 1.645e-4 |
UTR_5_PRIME
P5cr-2 UPSTREAM CG5823 & 1 other |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
|
|
| 3R | 25558802 | 3R_25558802_DEL [dm3] 3R_29733080_DEL [dm6] | CATAC | C | 7.486e-8 | 1.645e-4 |
UTR_3_PRIME
Kul |
||
| 2R | 18551994 | 2R_18551994_SNP [dm3] 2R_22664489_SNP [dm6] | C | T | 8.003e-8 | 1.746e-4 |
DOWNSTREAM
CG4250 INTERGENIC |
||
| 3L | 10648652 | 3L_10648652_SNP [dm3] 3L_10655552_SNP [dm6] | C | T | 8.003e-8 | 1.746e-4 |
INTRON
CG32066 |
||
| X | 12379572 | X_12379572_DEL [dm3] X_12485539_DEL [dm6] | AAACAGA | A | 8.003e-8 | 1.746e-4 |
INTERGENIC
|
||
| X | 12908549 | X_12908549_INS [dm3] X_13014516_INS [dm6] | G | GG | 8.003e-8 | 1.746e-4 |
INTRON
rad |
||
| 2L | 4426242 | 2L_4426242_SNP [dm3] 2L_4426242_SNP [dm6] | T | C | 8.488e-8 | 1.819e-4 |
INTRON
CG15431 |
||
| 2R | 12882216 | 2R_12882216_SNP [dm3] 2R_16994711_SNP [dm6] | T | A | 8.488e-8 | 1.819e-4 |
UTR_3_PRIME
Cbp53E DOWNSTREAM Cbp53E |
||
| 2R | 8701274 | 2R_8701274_SNP [dm3] 2R_12813769_SNP [dm6] | T | A | 8.488e-8 | 1.819e-4 |
INTERGENIC
|
||
| 3L | 15261121 | 3L_15261121_SNP [dm3] 3L_15268021_SNP [dm6] | A | T | 8.488e-8 | 1.819e-4 |
INTERGENIC
|
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
|
|
| 3L | 18213814 | 3L_18213814_SNP [dm3] 3L_18220714_SNP [dm6] | C | T | 8.488e-8 | 1.819e-4 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_zfh1
|
|
| 3L | 4377090 | 3L_4377090_SNP [dm3] 3L_4377090_SNP [dm6] | A | T | 8.488e-8 | 1.819e-4 |
DOWNSTREAM
CR44360 INTRON DopEcR |
||
| 3L | 4377096 | 3L_4377096_SNP [dm3] 3L_4377096_SNP [dm6] | A | T | 8.488e-8 | 1.819e-4 |
DOWNSTREAM
CR44360 INTRON DopEcR |
||
| 3L | 7822733 | 3L_7822733_SNP [dm3] 3L_7829633_SNP [dm6] | C | G | 8.488e-8 | 1.819e-4 |
INTRON
Pdp1 |
||
| 3R | 5122108 | 3R_5122108_SNP [dm3] 3R_9296386_SNP [dm6] | T | C | 8.488e-8 | 1.819e-4 |
INTRON
CG8861 |
||
| 3R | 8392678 | 3R_8392678_SNP [dm3] 3R_12566956_SNP [dm6] | C | A | 8.488e-8 | 1.819e-4 |
INTRON
Octbeta2R |
||
| X | 3659243 | X_3659243_INS [dm3] X_3765210_INS [dm6] | T | TATGTAG | 8.488e-8 | 1.819e-4 |
INTRON
tlk |
||
| 3R | 9614015 | 3R_9614015_SNP [dm3] 3R_13788293_SNP [dm6] | A | T | 8.947e-8 | 1.914e-4 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2L | 11809844 | 2L_11809844_SNP [dm3] 2L_11809844_SNP [dm6] | C | A | 9.801e-8 | 1.974e-4 |
UPSTREAM
crol DOWNSTREAM CycY INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
|
|
| 2L | 14423047 | 2L_14423047_SNP [dm3] 2L_14423047_SNP [dm6] | T | G | 9.801e-8 | 1.974e-4 |
INTERGENIC
|
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2L | 16188652 | 2L_16188652_SNP [dm3] 2L_16188652_SNP [dm6] | C | T | 9.801e-8 | 1.974e-4 |
INTRON
Ca-alpha1D |
||
| 2L | 16188672 | 2L_16188672_SNP [dm3] 2L_16188672_SNP [dm6] | G | A | 9.801e-8 | 1.974e-4 |
INTRON
Ca-alpha1D |
||
| 2L | 6415181 | 2L_6415181_SNP [dm3] 2L_6415181_SNP [dm6] | G | A | 9.801e-8 | 1.974e-4 |
UTR_3_PRIME
CG13982 & 1 other DOWNSTREAM Tig & 1 other |
||
| 2R | 12405127 | 2R_12405127_SNP [dm3] 2R_16517622_SNP [dm6] | T | A | 9.801e-8 | 1.974e-4 |
INTRON
Sema-2a |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2R | 12405137 | 2R_12405137_SNP [dm3] 2R_16517632_SNP [dm6] | C | T | 9.801e-8 | 1.974e-4 |
INTRON
Sema-2a |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2R | 12405138 | 2R_12405138_SNP [dm3] 2R_16517633_SNP [dm6] | T | A | 9.801e-8 | 1.974e-4 |
INTRON
Sema-2a |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 2R | 12765870 | 2R_12765870_SNP [dm3] 2R_16878365_SNP [dm6] | T | A | 9.801e-8 | 1.974e-4 |
INTRON
CG8910 |
||
| 2R | 13772572 | 2R_13772572_SNP [dm3] 2R_17885067_SNP [dm6] | A | G | 9.801e-8 | 1.974e-4 |
INTRON
Elk |
||
| 2R | 17684023 | 2R_17684023_SNP [dm3] 2R_21796518_SNP [dm6] | A | G | 9.801e-8 | 1.974e-4 |
START_GAINED
CG34204 UTR_5_PRIME CG34204 |
||
| 2R | 19317626 | 2R_19317626_SNP [dm3] 2R_23430103_SNP [dm6] | T | C | 9.801e-8 | 1.974e-4 |
INTRON
CG9815 |
||
| 2R | 7972995 | 2R_7972995_SNP [dm3] 2R_12085490_SNP [dm6] | T | C | 9.801e-8 | 1.974e-4 |
UTR_3_PRIME
jeb |
||
| 3L | 10417072 | 3L_10417072_SNP [dm3] 3L_10423972_SNP [dm6] | T | G | 9.801e-8 | 1.974e-4 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
| 3L | 1270544 | 3L_1270544_SNP [dm3] 3L_1270544_SNP [dm6] | C | T | 9.801e-8 | 1.974e-4 |
INTRON
CG9134 |
||
| 3L | 13886244 | 3L_13886244_SNP [dm3] 3L_13893144_SNP [dm6] | T | G | 9.801e-8 | 1.974e-4 |
INTRON
dysc |
||
| 3L | 14953104 | 3L_14953104_SNP [dm3] 3L_14960004_SNP [dm6] | A | C | 9.801e-8 | 1.974e-4 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
| 3L | 17098836 | 3L_17098836_SNP [dm3] 3L_17105736_SNP [dm6] | A | G | 9.801e-8 | 1.974e-4 |
INTRON
Rbp6 |
||
| 3L | 428351 | 3L_428351_INS [dm3] 3L_428351_INS [dm6] | G | GGAAAAAATGTTCAGTATAA... | 9.801e-8 | 1.974e-4 |
INTERGENIC
|
||
| 3L | 4377047 | 3L_4377047_SNP [dm3] 3L_4377047_SNP [dm6] | A | C | 9.801e-8 | 1.974e-4 |
DOWNSTREAM
CR44360 INTRON DopEcR |
||
| 3L | 53325 | 3L_53325_DEL [dm3] 3L_53325_DEL [dm6] | AAAGCA | A | 9.801e-8 | 1.974e-4 |
DOWNSTREAM
CG43149 INTERGENIC |
||
| 3R | 11319210 | 3R_11319210_DEL [dm3] 3R_15493488_DEL [dm6] | GAC | G | 9.801e-8 | 1.974e-4 |
DOWNSTREAM
CG5205 INTERGENIC |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_HSA
|
|
| 3R | 16233869 | 3R_16233869_SNP [dm3] 3R_20408147_SNP [dm6] | T | C | 9.801e-8 | 1.974e-4 |
UPSTREAM
CG10881 & 1 other INTRON Gfrl |
||
| 3R | 18672147 | 3R_18672147_SNP [dm3] 3R_22846425_SNP [dm6] | G | C | 9.801e-8 | 1.974e-4 |
UPSTREAM
CG4704 INTERGENIC |
||
| 3R | 26726587 | 3R_26726587_SNP [dm3] 3R_30900865_SNP [dm6] | T | A | 9.801e-8 | 1.974e-4 |
SYNONYMOUS_CODING
CG33483 DOWNSTREAM Cyp4c3 |
||
| 3R | 6657167 | 3R_6657167_SNP [dm3] 3R_10831445_SNP [dm6] | G | A | 9.801e-8 | 1.974e-4 |
INTRON
Cad86C |
TF binding site
BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA
|
|
| 3R | 6841890 | 3R_6841890_SNP [dm3] 3R_11016168_SNP [dm6] | A | G | 9.801e-8 | 1.974e-4 |
INTRON
CG34114 |
||
| X | 10023515 | X_10023515_SNP [dm3] X_10129482_SNP [dm6] | T | A | 9.801e-8 | 1.974e-4 |
INTRON
CR44894 & 1 other |
||
| X | 13382447 | X_13382447_SNP [dm3] X_13488414_SNP [dm6] | G | C | 9.801e-8 | 1.974e-4 |
INTRON
Neto |
||
| X | 13401169 | X_13401169_SNP [dm3] X_13507136_SNP [dm6] | C | A | 9.801e-8 | 1.974e-4 |
INTRON
Neto |
||
| X | 16878187 | X_16878187_SNP [dm3] X_16984154_SNP [dm6] | A | G | 9.801e-8 | 1.974e-4 |
INTRON
CG45002 |
||
| X | 16878189 | X_16878189_SNP [dm3] X_16984156_SNP [dm6] | A | T | 9.801e-8 | 1.974e-4 |
INTRON
CG45002 |
||
| X | 16878191 | X_16878191_DEL [dm3] X_16984158_DEL [dm6] | AG | A | 9.801e-8 | 1.974e-4 |
INTRON
CG45002 |
||
| X | 16878194 | X_16878194_SNP [dm3] X_16984161_SNP [dm6] | G | T | 9.801e-8 | 1.974e-4 |
INTRON
CG45002 |
||
| X | 22050567 | X_22050567_SNP [dm3] X_22648731_SNP [dm6] | A | T | 9.801e-8 | 1.974e-4 |
INTERGENIC
|
||
| X | 3520598 | X_3520598_SNP [dm3] X_3626565_SNP [dm6] | C | T | 9.801e-8 | 1.974e-4 |
INTRON
AstA-R1 |
||
| X | 3523925 | X_3523925_SNP [dm3] X_3629892_SNP [dm6] | T | G | 9.801e-8 | 1.974e-4 |
INTRON
AstA-R1 |
||
| X | 3523931 | X_3523931_INS [dm3] X_3629898_INS [dm6] | T | TGTTGAATAAAT... | 9.801e-8 | 1.974e-4 |
INTRON
AstA-R1 |
||
| 3L | 15260641 | 3L_15260641_SNP [dm3] 3L_15267541_SNP [dm6] | T | G | 1.132e-7 | 2.269e-4 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da mE1_TFBS_bab1 mE1_TFBS_HSA
|
|
| 3L | 16250976 | 3L_16250976_SNP [dm3] 3L_16257876_SNP [dm6] | G | T | 1.132e-7 | 2.269e-4 |
UPSTREAM
CG13054 INTERGENIC |
||
| 3R | 3549247 | 3R_3549247_SNP [dm3] 3R_7723525_SNP [dm6] | A | G | 1.132e-7 | 2.269e-4 |
INTRON
CG2616 |
||
| 3R | 15322232 | 3R_15322232_SNP [dm3] 3R_19496510_SNP [dm6] | C | T | 1.265e-7 | 2.529e-4 |
INTRON
Dys |
||
| 3R | 6273708 | 3R_6273708_INS [dm3] 3R_10447986_INS [dm6] | G | GCGTGTG | 1.265e-7 | 2.529e-4 |
INTERGENIC
|
||
| 3L | 15261089 | 3L_15261089_DEL [dm3] 3L_15267989_DEL [dm6] | TATTAAAAAGTTTATAACT... | T | 1.812e-7 | 3.604e-4 |
INTERGENIC
|
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
|
|
| X | 11322102 | X_11322102_SNP [dm3] X_11428069_SNP [dm6] | T | C | 1.812e-7 | 3.604e-4 |
INTRON
Gs2 |
||
| X | 9491432 | X_9491432_SNP [dm3] X_9597399_SNP [dm6] | A | T | 1.812e-7 | 3.604e-4 |
INTERGENIC
|
||
| 3R | 9451719 | 3R_9451719_SNP [dm3] 3R_13625997_SNP [dm6] | G | T | 1.855e-7 | 3.680e-4 |
INTERGENIC
|
||
| 3R | 9824953 | 3R_9824953_SNP [dm3] 3R_13999231_SNP [dm6] | A | C | 1.855e-7 | 3.680e-4 |
INTRON
rdx |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
| 2L | 16120806 | 2L_16120806_SNP [dm3] 2L_16120806_SNP [dm6] | G | C | 2.079e-7 | 4.117e-4 |
INTERGENIC
|
||
| 2L | 16188658 | 2L_16188658_SNP [dm3] 2L_16188658_SNP [dm6] | A | C | 2.155e-7 | 4.216e-4 |
INTRON
Ca-alpha1D |
||
| 2R | 13957867 | 2R_13957867_SNP [dm3] 2R_18070362_SNP [dm6] | T | A | 2.155e-7 | 4.216e-4 |
INTRON
CG34386 |
||
| 2R | 1519457 | 2R_1519457_SNP [dm3] 2R_5631952_SNP [dm6] | T | C | 2.155e-7 | 4.216e-4 |
INTERGENIC
|
transposable element
FlyBase
|
|
| 2R | 5102703 | 2R_5102703_SNP [dm3] 2R_9215198_SNP [dm6] | A | G | 2.155e-7 | 4.216e-4 |
DOWNSTREAM
CR44451 INTERGENIC |
||
| 3L | 17125110 | 3L_17125110_SNP [dm3] 3L_17132010_SNP [dm6] | G | A | 2.155e-7 | 4.216e-4 |
INTRON
Rbp6 |
||
| 3R | 7960679 | 3R_7960679_SNP [dm3] 3R_12134957_SNP [dm6] | T | A | 2.155e-7 | 4.216e-4 |
INTERGENIC
|
||
| X | 3247642 | X_3247642_SNP [dm3] X_3353609_SNP [dm6] | G | A | 2.155e-7 | 4.216e-4 |
INTERGENIC
|
||
| X | 9131093 | X_9131093_SNP [dm3] X_9237060_SNP [dm6] | A | T | 2.155e-7 | 4.216e-4 |
UTR_3_PRIME
mxc UPSTREAM mir-4916 & 1 other |