©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
3R | 15137983 | 3R_15137983_SNP [dm3] 3R_19312261_SNP [dm6] | G | A | 1.950e-6 | 0.888 |
INTRON
Dl |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 18914456 | 3L_18914456_SNP [dm3] 3L_18921356_SNP [dm6] | G | C | 2.415e-6 | 0.888 |
SYNONYMOUS_CODING
CG3819 |
TF binding site
mE1_TFBS_cad
|
|
3L | 13929147 | 3L_13929147_SNP [dm3] 3L_13936047_SNP [dm6] | T | C | 3.273e-6 | 0.888 |
INTERGENIC
|
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
2L | 2757738 | 2L_2757738_DEL [dm3] 2L_2757738_DEL [dm6] | AT | A | 4.834e-6 | 0.888 |
UTR_3_PRIME
Bacc DOWNSTREAM CR44772 & 2 others |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 2424463 | 2L_2424463_INS [dm3] 2L_2424463_INS [dm6] | A | AA | 5.112e-6 | 0.888 |
UTR_3_PRIME
CG9886 UPSTREAM CG44139 |
||
2R | 12148290 | 2R_12148290_SNP [dm3] 2R_16260785_SNP [dm6] | A | T | 5.146e-6 | 0.888 |
UPSTREAM
CngA INTERGENIC |
||
3L | 1402237 | 3L_1402237_SNP [dm3] 3L_1402237_SNP [dm6] | G | A | 5.436e-6 | 0.888 |
DOWNSTREAM
tRNA:E4:62Ad & 2 others INTRON Ptp61F |
TF binding site
mE1_TFBS_HSA
|
|
2L | 8492891 | 2L_8492891_SNP [dm3] 2L_8492891_SNP [dm6] | G | A | 6.537e-6 | 0.888 |
INTRON
Dh31 |
||
2L | 2424473 | 2L_2424473_SNP [dm3] 2L_2424473_SNP [dm6] | C | T | 6.660e-6 | 0.888 |
UTR_3_PRIME
CG9886 UPSTREAM CG44139 |
||
2L | 2419105 | 2L_2419105_SNP [dm3] 2L_2419105_SNP [dm6] | T | C | 8.805e-6 | 0.888 |
SYNONYMOUS_CODING
CG34447 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 6930497 | 3R_6930497_SNP [dm3] 3R_11104775_SNP [dm6] | A | T | 9.078e-6 | 0.888 |
INTERGENIC
|
||
2L | 11198371 | 2L_11198371_SNP [dm3] 2L_11198371_SNP [dm6] | T | A | 9.108e-6 | 0.888 |
INTRON
Ca-beta |
||
3L | 18913471 | 3L_18913471_SNP [dm3] 3L_18920371_SNP [dm6] | A | G | 1.077e-5 | 0.888 |
UPSTREAM
CG18223 DOWNSTREAM CG3819 INTERGENIC |
||
2L | 13708418 | 2L_13708418_SNP [dm3] 2L_13708418_SNP [dm6] | T | C | 1.143e-5 | 0.888 |
UTR_5_PRIME
CG7311 INTRON CG31814 |
TF binding site
mE1_TFBS_inv
|
|
X | 10446569 | X_10446569_SNP [dm3] X_10552536_SNP [dm6] | G | C | 1.188e-5 | 0.888 |
INTRON
spri |
||
3R | 24476268 | 3R_24476268_SNP [dm3] 3R_28650546_SNP [dm6] | G | A | 1.246e-5 | 0.888 |
UPSTREAM
CG31050 INTERGENIC |
||
3L | 10829147 | 3L_10829147_SNP [dm3] 3L_10836047_SNP [dm6] | A | G | 1.388e-5 | 0.888 |
INTERGENIC
|
||
2L | 13082829 | 2L_13082829_SNP [dm3] 2L_13082829_SNP [dm6] | G | A | 1.420e-5 | 0.888 |
INTERGENIC
|
||
3R | 10966643 | 3R_10966643_SNP [dm3] 3R_15140921_SNP [dm6] | C | G | 1.432e-5 | 0.888 |
SYNONYMOUS_CODING
CG3987 UPSTREAM CR45600 DOWNSTREAM GlyS |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 16020028 | 3R_16020028_SNP [dm3] 3R_20194306_SNP [dm6] | C | G | 1.535e-5 | 0.888 |
INTERGENIC
|
||
3R | 23166521 | 3R_23166521_SNP [dm3] 3R_27340799_SNP [dm6] | C | G | 1.564e-5 | 0.888 |
NON_SYNONYMOUS_CODING
CG42534 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2R | 10034388 | 2R_10034388_SNP [dm3] 2R_14146883_SNP [dm6] | A | C | 1.590e-5 | 0.888 |
INTERGENIC
|
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad
|
|
3L | 2591792 | 3L_2591792_SNP [dm3] 3L_2591792_SNP [dm6] | G | T | 1.601e-5 | 0.888 |
INTRON
dos |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 14372505 | 2L_14372505_SNP [dm3] 2L_14372505_SNP [dm6] | A | T | 1.602e-5 | 0.888 |
INTERGENIC
|
||
2R | 9526622 | 2R_9526622_SNP [dm3] 2R_13639117_SNP [dm6] | A | C | 1.744e-5 | 0.888 |
INTRON
fas |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2L | 8492926 | 2L_8492926_SNP [dm3] 2L_8492926_SNP [dm6] | C | G | 1.997e-5 | 0.888 |
INTRON
Dh31 |
||
X | 2662858 | X_2662858_SNP [dm3] X_2768825_SNP [dm6] | G | A | 2.094e-5 | 0.888 |
INTRON
kirre |
||
2L | 16185023 | 2L_16185023_SNP [dm3] 2L_16185023_SNP [dm6] | C | T | 2.142e-5 | 0.888 |
SYNONYMOUS_CODING
Ca-alpha1D |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
2L | 1748623 | 2L_1748623_SNP [dm3] 2L_1748623_SNP [dm6] | G | C | 2.259e-5 | 0.888 |
INTRON
CG17646 |
||
3R | 13442613 | 3R_13442613_SNP [dm3] 3R_17616891_SNP [dm6] | C | G | 2.314e-5 | 0.888 |
UPSTREAM
tRNA:V3b:90BC INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
|
|
3R | 6926668 | 3R_6926668_SNP [dm3] 3R_11100946_SNP [dm6] | A | C | 2.359e-5 | 0.888 |
UPSTREAM
CR45579 INTERGENIC |
||
2L | 14735067 | 2L_14735067_SNP [dm3] 2L_14735067_SNP [dm6] | T | A | 2.452e-5 | 0.888 |
UPSTREAM
CG31835 INTERGENIC |
||
2L | 2424603 | 2L_2424603_SNP [dm3] 2L_2424603_SNP [dm6] | G | A | 2.482e-5 | 0.888 |
UTR_3_PRIME
CG9886 UPSTREAM CG44139 |
||
2R | 17452514 | 2R_17452514_SNP [dm3] 2R_21565009_SNP [dm6] | A | G | 2.495e-5 | 0.888 |
INTRON
CG10440 |
||
X | 7816116 | X_7816116_SNP [dm3] X_7922083_SNP [dm6] | G | A | 2.527e-5 | 0.888 |
DOWNSTREAM
CG10777 & 1 other INTERGENIC |
||
X | 21094842 | X_21094842_SNP [dm3] X_21223815_SNP [dm6] | G | C | 2.554e-5 | 0.888 |
INTRON
CG32521 |
TF binding site
mE1_TFBS_inv
|
|
3L | 14202312 | 3L_14202312_SNP [dm3] 3L_14209212_SNP [dm6] | C | T | 2.633e-5 | 0.888 |
INTRON
nuf |
||
2R | 4438449 | 2R_4438449_SNP [dm3] 2R_8550944_SNP [dm6] | C | A | 2.678e-5 | 0.888 |
DOWNSTREAM
CG12780 INTERGENIC |
||
2L | 11882120 | 2L_11882120_SNP [dm3] 2L_11882120_SNP [dm6] | G | T | 2.684e-5 | 0.888 |
INTRON
Pde1c |
||
X | 13867075 | X_13867075_INS [dm3] X_13973042_INS [dm6] | A | AT | 2.702e-5 | 0.888 |
INTRON
mamo |
||
X | 13867070 | X_13867070_SNP [dm3] X_13973037_SNP [dm6] | C | T | 2.757e-5 | 0.888 |
INTRON
mamo |
||
3L | 1402125 | 3L_1402125_SNP [dm3] 3L_1402125_SNP [dm6] | C | A | 2.799e-5 | 0.888 |
DOWNSTREAM
tRNA:E4:62Ad & 2 others INTRON Ptp61F |
TF binding site
BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
|
|
2L | 7582818 | 2L_7582818_SNP [dm3] 2L_7582818_SNP [dm6] | A | G | 2.850e-5 | 0.888 |
NON_SYNONYMOUS_CODING
Spn28B |
||
2L | 4936358 | 2L_4936358_SNP [dm3] 2L_4936358_SNP [dm6] | G | A | 2.914e-5 | 0.888 |
START_GAINED
hoe2 UTR_5_PRIME hoe2 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
3L | 18913570 | 3L_18913570_SNP [dm3] 3L_18920470_SNP [dm6] | A | T | 3.083e-5 | 0.888 |
UTR_3_PRIME
CG3819 UPSTREAM CG18223 DOWNSTREAM CG3819 |
||
2R | 9526621 | 2R_9526621_SNP [dm3] 2R_13639116_SNP [dm6] | C | A | 3.095e-5 | 0.888 |
INTRON
fas |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3L | 12867573 | 3L_12867573_SNP [dm3] 3L_12874473_SNP [dm6] | C | A | 3.108e-5 | 0.888 |
INTERGENIC
|
||
3R | 9340479 | 3R_9340479_DEL [dm3] 3R_13514757_DEL [dm6] | TG | C | 3.165e-5 | 0.888 |
INTERGENIC
|
||
3L | 1402123 | 3L_1402123_SNP [dm3] 3L_1402123_SNP [dm6] | C | T | 3.257e-5 | 0.888 |
DOWNSTREAM
tRNA:E4:62Ad & 2 others INTRON Ptp61F |
TF binding site
BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
|
|
2L | 2424903 | 2L_2424903_SNP [dm3] 2L_2424903_SNP [dm6] | C | T | 3.268e-5 | 0.888 |
SYNONYMOUS_CODING
CG44139 DOWNSTREAM CG9886 |
||
2R | 18698182 | 2R_18698182_SNP [dm3] 2R_22810677_SNP [dm6] | T | A | 3.273e-5 | 0.888 |
INTRON
stl |
TF binding site
BDTNP1_TFBS_twi
|
|
3R | 6926659 | 3R_6926659_SNP [dm3] 3R_11100937_SNP [dm6] | A | C | 3.380e-5 | 0.888 |
UPSTREAM
CR45579 INTERGENIC |
||
3R | 13442278 | 3R_13442278_SNP [dm3] 3R_17616556_SNP [dm6] | C | T | 3.383e-5 | 0.888 |
INTERGENIC
|
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_zfh1
|
|
3R | 4822941 | 3R_4822941_SNP [dm3] 3R_8997219_SNP [dm6] | T | A | 3.397e-5 | 0.888 |
UPSTREAM
CG11977 INTRON CG31100 |
||
X | 2662864 | X_2662864_SNP [dm3] X_2768831_SNP [dm6] | A | G | 3.401e-5 | 0.888 |
INTRON
kirre |
||
2R | 18801389 | 2R_18801389_SNP [dm3] 2R_22913866_SNP [dm6] | A | T | 3.424e-5 | 0.888 |
INTRON
nahoda |
||
3R | 4820643 | 3R_4820643_SNP [dm3] 3R_8994921_SNP [dm6] | C | A | 3.466e-5 | 0.888 |
UTR_3_PRIME
CG11975 DOWNSTREAM CG31100 & 1 other |
||
3L | 1083500 | 3L_1083500_DEL [dm3] 3L_1083500_DEL [dm6] | AA | A | 3.484e-5 | 0.888 |
INTRON
bab1 |
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 11881357 | 2L_11881357_SNP [dm3] 2L_11881357_SNP [dm6] | C | T | 3.488e-5 | 0.888 |
INTRON
Pde1c |
TF binding site
mE1_TFBS_inv
|
|
2R | 16843949 | 2R_16843949_SNP [dm3] 2R_20956444_SNP [dm6] | C | T | 3.502e-5 | 0.888 |
INTRON
hbn |
TF binding site
mE1_TFBS_cad mE1_TFBS_sens
|
|
3R | 6930710 | 3R_6930710_SNP [dm3] 3R_11104988_SNP [dm6] | C | T | 3.539e-5 | 0.888 |
INTERGENIC
|
||
3R | 8241764 | 3R_8241764_SNP [dm3] 3R_12416042_SNP [dm6] | T | C | 3.577e-5 | 0.888 |
SYNONYMOUS_CODING
pps |
TF binding site
mE1_TFBS_sens
|
|
3R | 13443392 | 3R_13443392_SNP [dm3] 3R_17617670_SNP [dm6] | C | A | 3.660e-5 | 0.888 |
UPSTREAM
tRNA:V3b:90BC DOWNSTREAM tRNA:P:90Ca & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
|
|
X | 2896677 | X_2896677_SNP [dm3] X_3002644_SNP [dm6] | C | G | 3.871e-5 | 0.888 |
INTRON
kirre |
||
2R | 17452381 | 2R_17452381_DEL [dm3] 2R_21564876_DEL [dm6] | AGA | A | 3.927e-5 | 0.888 |
INTRON
CG10440 |
||
2L | 676520 | 2L_676520_SNP [dm3] 2L_676520_SNP [dm6] | C | G | 3.937e-5 | 0.888 |
INTRON
ds |
||
2R | 9526623 | 2R_9526623_INS [dm3] 2R_13639118_INS [dm6] | C | CCCCTGTTTTCC... | 3.966e-5 | 0.888 |
INTRON
fas |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3L | 18913506 | 3L_18913506_DEL [dm3] 3L_18920406_DEL [dm6] | AAAAATAT | A | 4.089e-5 | 0.888 |
UPSTREAM
CG18223 DOWNSTREAM CG3819 INTERGENIC |
||
2L | 13708423 | 2L_13708423_SNP [dm3] 2L_13708423_SNP [dm6] | G | A | 4.119e-5 | 0.888 |
UTR_5_PRIME
CG7311 INTRON CG31814 |
TF binding site
mE1_TFBS_inv
|
|
3R | 21856194 | 3R_21856194_SNP [dm3] 3R_26030472_SNP [dm6] | T | C | 4.123e-5 | 0.888 |
UPSTREAM
E_spl_m5-HLH INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens |
|
2L | 10191573 | 2L_10191573_DEL [dm3] 2L_10191573_DEL [dm6] | AA | T | 4.224e-5 | 0.888 |
UPSTREAM
CG31874 INTRON Sur |
||
3R | 13443391 | 3R_13443391_SNP [dm3] 3R_17617669_SNP [dm6] | C | A | 4.299e-5 | 0.888 |
UPSTREAM
tRNA:V3b:90BC DOWNSTREAM tRNA:P:90Ca & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
|
|
3L | 7024371 | 3L_7024371_SNP [dm3] 3L_7031271_SNP [dm6] | C | T | 4.315e-5 | 0.888 |
INTRON
Mp |
||
2L | 2419042 | 2L_2419042_SNP [dm3] 2L_2419042_SNP [dm6] | G | T | 4.367e-5 | 0.888 |
SYNONYMOUS_CODING
CG34447 |
TF binding site
mE1_TFBS_sens
|
|
3R | 14523254 | 3R_14523254_SNP [dm3] 3R_18697532_SNP [dm6] | A | T | 4.408e-5 | 0.888 |
INTERGENIC
|
||
3L | 4630663 | 3L_4630663_SNP [dm3] 3L_4630663_SNP [dm6] | T | G | 4.457e-5 | 0.888 |
INTRON
axo |
||
3L | 290190 | 3L_290190_SNP [dm3] 3L_290190_SNP [dm6] | T | C | 4.589e-5 | 0.888 |
SYNONYMOUS_CODING
RhoGEF3 |
||
2L | 10956638 | 2L_10956638_SNP [dm3] 2L_10956638_SNP [dm6] | A | G | 4.591e-5 | 0.888 |
INTRON
dpr2 |
||
2L | 3178302 | 2L_3178302_SNP [dm3] 2L_3178302_SNP [dm6] | G | A | 4.618e-5 | 0.888 |
INTRON
CG34393 |
TF binding site
mE1_TFBS_sens
|
|
X | 2662880 | X_2662880_SNP [dm3] X_2768847_SNP [dm6] | T | A | 4.711e-5 | 0.888 |
INTRON
kirre |
||
2R | 10005281 | 2R_10005281_SNP [dm3] 2R_14117776_SNP [dm6] | G | C | 4.712e-5 | 0.888 |
INTRON
Prosap |
||
X | 2662875 | X_2662875_SNP [dm3] X_2768842_SNP [dm6] | C | T | 4.753e-5 | 0.888 |
INTRON
kirre |
||
X | 5078311 | X_5078311_INS [dm3] X_5184278_INS [dm6] | C | CC | 4.755e-5 | 0.888 |
INTRON
rg & 1 other |
||
3R | 23207486 | 3R_23207486_SNP [dm3] 3R_27381764_SNP [dm6] | C | T | 4.795e-5 | 0.888 |
UTR_3_PRIME
side INTRON side |
||
2R | 16659349 | 2R_16659349_SNP [dm3] 2R_20771844_SNP [dm6] | C | T | 4.832e-5 | 0.888 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
|
|
X | 2662877 | X_2662877_SNP [dm3] X_2768844_SNP [dm6] | A | T | 4.856e-5 | 0.888 |
INTRON
kirre |
||
2L | 11198388 | 2L_11198388_SNP [dm3] 2L_11198388_SNP [dm6] | C | T | 4.969e-5 | 0.888 |
INTRON
Ca-beta |
||
2L | 11528870 | 2L_11528870_DEL [dm3] 2L_11528870_DEL [dm6] | TTT | T | 4.984e-5 | 0.888 |
UPSTREAM
CG31705 DOWNSTREAM CG31706 INTERGENIC |
||
3L | 4496786 | 3L_4496786_SNP [dm3] 3L_4496786_SNP [dm6] | T | A | 5.107e-5 | 0.888 |
DOWNSTREAM
CG13721 INTERGENIC |
TF binding site
mE1_TFBS_inv
|
|
2R | 18279183 | 2R_18279183_SNP [dm3] 2R_22391678_SNP [dm6] | T | C | 5.117e-5 | 0.888 |
SPLICE_SITE_REGION
CG13506 INTRON CG13506 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
X | 7882885 | X_7882885_SNP [dm3] X_7988852_SNP [dm6] | T | C | 5.274e-5 | 0.888 |
INTERGENIC
|
||
2R | 18762021 | 2R_18762021_SNP [dm3] 2R_22874498_SNP [dm6] | A | G | 5.325e-5 | 0.888 |
UPSTREAM
PIP5K59B DOWNSTREAM CR45469 & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
X | 4793963 | X_4793963_SNP [dm3] X_4899930_SNP [dm6] | A | G | 5.366e-5 | 0.888 |
INTRON
CG42594 |
||
2L | 17534394 | 2L_17534394_SNP [dm3] 2L_17534394_SNP [dm6] | G | C | 5.470e-5 | 0.888 |
INTERGENIC
|
||
3R | 10955682 | 3R_10955682_SNP [dm3] 3R_15129960_SNP [dm6] | G | T | 5.511e-5 | 0.888 |
DOWNSTREAM
mir-2493 INTRON CG42788 |
||
3R | 10855776 | 3R_10855776_SNP [dm3] 3R_15030054_SNP [dm6] | C | A | 5.542e-5 | 0.888 |
INTERGENIC
|
TF binding site
mE1_TFBS_inv
|
|
3L | 1083512 | 3L_1083512_SNP [dm3] 3L_1083512_SNP [dm6] | T | C | 5.597e-5 | 0.888 |
INTRON
bab1 |
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 14372544 | 2L_14372544_SNP [dm3] 2L_14372544_SNP [dm6] | T | C | 5.660e-5 | 0.888 |
INTERGENIC
|
||
2L | 10191576 | 2L_10191576_SNP [dm3] 2L_10191576_SNP [dm6] | T | G | 5.661e-5 | 0.888 |
UPSTREAM
CG31874 INTRON Sur |
||
2R | 11815557 | 2R_11815557_SNP [dm3] 2R_15928052_SNP [dm6] | T | G | 5.710e-5 | 0.888 |
UTR_5_PRIME
bdg INTRON bdg |