DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=3.567e^-1)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2072 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

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Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2L	6048155	2L_6048155_SNP [dm3] 2L_6048155_SNP [dm6]	A	G	2.823e^-7	0.135	SYNONYMOUS_CODING CG34179 START_GAINED CG12393 UTR_5_PRIME slmo & 1 other UPSTREAM CG12393 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2R	16076518	2R_16076518_SNP [dm3] 2R_20189013_SNP [dm6]	C	T	5.647e^-7	0.135	INTERGENIC
3R	21691531	3R_21691531_SNP [dm3] 3R_25865809_SNP [dm6]	A	G	6.979e^-7	0.135	INTRON CG5890
3R	22549045	3R_22549045_SNP [dm3] 3R_26723323_SNP [dm6]	G	A	8.881e^-7	0.135	INTRON CG6420
3R	22549137	3R_22549137_SNP [dm3] 3R_26723415_SNP [dm6]	A	T	8.881e^-7	0.135	INTRON CG6420
3R	22548961	3R_22548961_DEL [dm3] 3R_26723239_DEL [dm6]	TG	T	8.927e^-7	0.135	INTRON CG6420
3R	22542298	3R_22542298_SNP [dm3] 3R_26716576_SNP [dm6]	G	A	9.367e^-7	0.135	SYNONYMOUS_CODING CG6425	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	22544991	3R_22544991_SNP [dm3] 3R_26719269_SNP [dm6]	A	T	9.367e^-7	0.135	SYNONYMOUS_CODING CG5484 DOWNSTREAM CG6420	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	22545003	3R_22545003_SNP [dm3] 3R_26719281_SNP [dm6]	T	C	9.367e^-7	0.135	SYNONYMOUS_CODING CG5484 DOWNSTREAM CG6420	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	22545012	3R_22545012_SNP [dm3] 3R_26719290_SNP [dm6]	C	T	9.367e^-7	0.135	SYNONYMOUS_CODING CG5484 DOWNSTREAM CG6420	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	22545021	3R_22545021_SNP [dm3] 3R_26719299_SNP [dm6]	T	C	9.367e^-7	0.135	SYNONYMOUS_CODING CG5484 DOWNSTREAM CG6420	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	22545050	3R_22545050_SNP [dm3] 3R_26719328_SNP [dm6]	A	T	9.367e^-7	0.135	DOWNSTREAM CG6420 INTRON CG5484	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	22545064	3R_22545064_SNP [dm3] 3R_26719342_SNP [dm6]	A	T	9.367e^-7	0.135	DOWNSTREAM CG6420 INTRON CG5484	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	22549199	3R_22549199_SNP [dm3] 3R_26723477_SNP [dm6]	A	T	1.032e^-6	0.138	INTRON CG6420
2L	6048227	2L_6048227_SNP [dm3] 2L_6048227_SNP [dm6]	T	C	1.446e^-6	0.164	SYNONYMOUS_CODING CG34179 UTR_5_PRIME slmo & 1 other UPSTREAM CG12393 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3R	22543395	3R_22543395_SNP [dm3] 3R_26717673_SNP [dm6]	T	G	1.453e^-6	0.164	UPSTREAM CG5484 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Ubx
3R	22548932	3R_22548932_SNP [dm3] 3R_26723210_SNP [dm6]	C	A	1.489e^-6	0.164	INTRON CG6420
3R	22549408	3R_22549408_SNP [dm3] 3R_26723686_SNP [dm6]	G	T	1.571e^-6	0.164	INTRON CG6420	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	15525692	2R_15525692_SNP [dm3] 2R_19638187_SNP [dm6]	T	C	1.928e^-6	0.19	DOWNSTREAM CG18367 & 2 others INTERGENIC
2R	10622250	2R_10622250_SNP [dm3] 2R_14734745_SNP [dm6]	A	T	2.900e^-6	0.258	INTERGENIC
3L	15090803	3L_15090803_SNP [dm3] 3L_15097703_SNP [dm6]	A	C	2.934e^-6	0.258	UPSTREAM CTPsyn DOWNSTREAM CR43973 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	15032038	2R_15032038_SNP [dm3] 2R_19144533_SNP [dm6]	T	A	3.025e^-6	0.258	UPSTREAM CR43399 INTRON ena	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	15031080	2R_15031080_SNP [dm3] 2R_19143575_SNP [dm6]	T	A	3.318e^-6	0.266	UPSTREAM CR43399 INTRON ena	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	6048217	2L_6048217_SNP [dm3] 2L_6048217_SNP [dm6]	C	A	3.401e^-6	0.266	NON_SYNONYMOUS_CODING CG34179 UTR_5_PRIME slmo & 1 other UPSTREAM CG12393 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2R	15525634	2R_15525634_SNP [dm3] 2R_19638129_SNP [dm6]	C	T	4.780e^-6	0.357	DOWNSTREAM CG18367 & 2 others INTERGENIC
2R	15525732	2R_15525732_SNP [dm3] 2R_19638227_SNP [dm6]	C	T	4.946e^-6	0.357	DOWNSTREAM CG18367 & 2 others INTERGENIC
2R	15525709	2R_15525709_SNP [dm3] 2R_19638204_SNP [dm6]	T	C	5.146e^-6	0.357	DOWNSTREAM CG18367 & 2 others INTERGENIC
X	13199667	X_13199667_SNP [dm3] X_13305634_SNP [dm6]	G	A	5.483e^-6	0.367	UTR_5_PRIME IP3K2 INTRON IP3K2 EXON CR45018	TF binding site mE1_TFBS_cad
3R	21712691	3R_21712691_SNP [dm3] 3R_25886969_SNP [dm6]	A	G	6.745e^-6	0.436	SYNONYMOUS_CODING SppL
2R	9065287	2R_9065287_SNP [dm3] 2R_13177782_SNP [dm6]	A	T	7.707e^-6	0.482	SYNONYMOUS_CODING CG17724 UTR_3_PRIME seq & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15031498	2R_15031498_SNP [dm3] 2R_19143993_SNP [dm6]	T	C	8.165e^-6	0.494	UPSTREAM CR43399 INTRON ena	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_gt BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Trl
X	19624457	X_19624457_SNP [dm3] X_19730424_SNP [dm6]	T	C	1.000e^-5	0.573	UPSTREAM AP-1-2beta DOWNSTREAM CG12531 INTERGENIC	TF binding site mE1_TFBS_HSA
2R	15031106	2R_15031106_SNP [dm3] 2R_19143601_SNP [dm6]	C	G	1.020e^-5	0.573	UPSTREAM CR43399 INTRON ena	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	15090862	3L_15090862_DEL [dm3] 3L_15097762_DEL [dm6]	TCT	T	1.038e^-5	0.573	UPSTREAM CTPsyn DOWNSTREAM CR43973 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	10588369	2R_10588369_SNP [dm3] 2R_14700864_SNP [dm6]	G	A	1.107e^-5	0.593	INTRON mspo
2L	19965643	2L_19965643_SNP [dm3] 2L_19965643_SNP [dm6]	T	G	1.139e^-5	0.593	UTR_3_PRIME CG10680 DOWNSTREAM OS9 & 1 other
3L	15090924	3L_15090924_SNP [dm3] 3L_15097824_SNP [dm6]	T	A	1.209e^-5	0.612	UPSTREAM CTPsyn DOWNSTREAM CR43973 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	11018172	2R_11018172_SNP [dm3] 2R_15130667_SNP [dm6]	A	T	1.330e^-5	0.624	INTRON chn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
2R	15171691	2R_15171691_SNP [dm3] 2R_19284186_SNP [dm6]	T	G	1.348e^-5	0.624	UPSTREAM CG11906 DOWNSTREAM CG10476 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_GATAe mE1_TFBS_HSA
2R	17475354	2R_17475354_SNP [dm3] 2R_21587849_SNP [dm6]	T	C	1.371e^-5	0.624	INTERGENIC	TF binding site mE1_TFBS_cad
2R	17475356	2R_17475356_SNP [dm3] 2R_21587851_SNP [dm6]	A	T	1.371e^-5	0.624	INTERGENIC	TF binding site mE1_TFBS_cad
X	7535575	X_7535575_SNP [dm3] X_7641542_SNP [dm6]	T	C	1.397e^-5	0.624	INTRON ct
2R	10622258	2R_10622258_SNP [dm3] 2R_14734753_SNP [dm6]	T	C	1.469e^-5	0.627	INTERGENIC
3R	21691410	3R_21691410_SNP [dm3] 3R_25865688_SNP [dm6]	T	C	1.472e^-5	0.627	INTRON CG5890
2L	6870030	2L_6870030_SNP [dm3] 2L_6870030_SNP [dm6]	A	G	1.545e^-5	0.644	INTRON Nha1
3L	15312622	3L_15312622_SNP [dm3] 3L_15319522_SNP [dm6]	A	G	1.639e^-5	0.668	INTERGENIC
2L	11828748	2L_11828748_SNP [dm3] 2L_11828748_SNP [dm6]	A	G	1.775e^-5	0.7	SYNONYMOUS_CODING esc INTRON Pde1c	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	15091041	3L_15091041_SNP [dm3] 3L_15097941_SNP [dm6]	T	A	1.801e^-5	0.7	UTR_5_PRIME CTPsyn UPSTREAM CTPsyn DOWNSTREAM CR43973 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	12862127	3L_12862127_DEL [dm3] 3L_12869027_DEL [dm6]	TC	T	1.830e^-5	0.7	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	11005350	2R_11005350_SNP [dm3] 2R_15117845_SNP [dm6]	G	A	1.933e^-5	0.718	INTRON chn	TF binding site BDTNP1_TFBS_dl
3L	15090970	3L_15090970_SNP [dm3] 3L_15097870_SNP [dm6]	C	G	1.977e^-5	0.718	UPSTREAM CTPsyn DOWNSTREAM CR43973 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3R	22549262	3R_22549262_SNP [dm3] 3R_26723540_SNP [dm6]	C	T	1.990e^-5	0.718	INTRON CG6420	TF binding site mE1_TFBS_cad
3R	25961075	3R_25961075_SNP [dm3] 3R_30135353_SNP [dm6]	G	A	2.433e^-5	0.856	SYNONYMOUS_CODING AdoR UPSTREAM Tpi	TF binding site mE1_TFBS_chinmo
2L	3160442	2L_3160442_SNP [dm3] 2L_3160442_SNP [dm6]	G	A	2.523e^-5	0.856	NON_SYNONYMOUS_CODING gkt UPSTREAM Mad	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	18080125	3L_18080125_SNP [dm3] 3L_18087025_SNP [dm6]	A	G	2.574e^-5	0.856	INTRON CR32194 & 1 other
2L	9068482	2L_9068482_SNP [dm3] 2L_9068482_SNP [dm6]	G	A	2.596e^-5	0.856	INTRON CG31708
X	4668381	X_4668381_SNP [dm3] X_4774348_SNP [dm6]	C	A	2.734e^-5	0.856	DOWNSTREAM CR45515 INTERGENIC
2L	9109893	2L_9109893_SNP [dm3] 2L_9109893_SNP [dm6]	T	C	2.880e^-5	0.856	INTERGENIC
2R	10229932	2R_10229932_SNP [dm3] 2R_14342427_SNP [dm6]	C	A	2.908e^-5	0.856	INTRON Shroom	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	15482502	X_15482502_SNP [dm3] X_15588469_SNP [dm6]	A	C	2.931e^-5	0.856	SYNONYMOUS_CODING CG8105 INTRON CG9220	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	19835957	3R_19835957_SNP [dm3] 3R_24010235_SNP [dm6]	G	C	2.974e^-5	0.856	INTRON KrT95D
X	13199689	X_13199689_SNP [dm3] X_13305656_SNP [dm6]	A	G	2.999e^-5	0.856	UTR_5_PRIME IP3K2 INTRON IP3K2 EXON CR45018	TF binding site mE1_TFBS_cad
2L	18718835	2L_18718835_SNP [dm3] 2L_18718835_SNP [dm6]	C	A	3.051e^-5	0.856	INTRON CG10348
3R	19835961	3R_19835961_SNP [dm3] 3R_24010239_SNP [dm6]	G	A	3.090e^-5	0.856	INTRON KrT95D
3R	19836085	3R_19836085_DEL [dm3] 3R_24010363_DEL [dm6]	TTGTTAAACAAT...	T	3.090e^-5	0.856	INTRON KrT95D
3L	10489602	3L_10489602_DEL [dm3] 3L_10496502_DEL [dm6]	TC	T	3.092e^-5	0.856	INTRON A2bp1
2L	9098848	2L_9098848_SNP [dm3] 2L_9098848_SNP [dm6]	T	G	3.187e^-5	0.856	UPSTREAM CR44482 DOWNSTREAM CG31609 INTERGENIC
3R	19835974	3R_19835974_SNP [dm3] 3R_24010252_SNP [dm6]	A	T	3.340e^-5	0.856	INTRON KrT95D
2L	6869510	2L_6869510_SNP [dm3] 2L_6869510_SNP [dm6]	T	C	3.353e^-5	0.856	INTRON Nha1
3R	19836116	3R_19836116_SNP [dm3] 3R_24010394_SNP [dm6]	A	T	3.373e^-5	0.856	INTRON KrT95D
X	574987	X_574987_SNP [dm3] X_680954_SNP [dm6]	G	A	3.668e^-5	0.856	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_eve mE1_TFBS_HSA
3R	19836069	3R_19836069_SNP [dm3] 3R_24010347_SNP [dm6]	T	A	3.684e^-5	0.856	INTRON KrT95D
3L	15091049	3L_15091049_SNP [dm3] 3L_15097949_SNP [dm6]	G	T	3.702e^-5	0.856	UTR_5_PRIME CTPsyn UPSTREAM CTPsyn DOWNSTREAM CR43973 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2L	7241448	2L_7241448_SNP [dm3] 2L_7241448_SNP [dm6]	C	G	3.705e^-5	0.856	UPSTREAM Ndae1 INTRON Ndae1
3L	17982336	3L_17982336_SNP [dm3] 3L_17989236_SNP [dm6]	C	T	3.730e^-5	0.856	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3R	19836103	3R_19836103_SNP [dm3] 3R_24010381_SNP [dm6]	C	A	3.748e^-5	0.856	INTRON KrT95D
2R	12381003	2R_12381003_INS [dm3] 2R_16493498_INS [dm6]	G	CAAAA	3.754e^-5	0.856	DOWNSTREAM S-Lap8 INTERGENIC	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	2183902	2R_2183902_SNP [dm3] 2R_6296397_SNP [dm6]	C	A	3.770e^-5	0.856	INTERGENIC	transposable element FlyBase
2R	15171922	2R_15171922_SNP [dm3] 2R_19284417_SNP [dm6]	T	G	3.815e^-5	0.856	UPSTREAM CG11906 DOWNSTREAM CG10476 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	9647106	2R_9647106_SNP [dm3] 2R_13759601_SNP [dm6]	C	T	3.960e^-5	0.856	DOWNSTREAM CG6280 INTERGENIC
3L	4001962	3L_4001962_INS [dm3] 3L_4001962_INS [dm6]	A	ACA	4.240e^-5	0.856	INTERGENIC
3R	24280939	3R_24280939_SNP [dm3] 3R_28455217_SNP [dm6]	G	A	4.273e^-5	0.856	INTRON beat-VI
2L	9085820	2L_9085820_SNP [dm3] 2L_9085820_SNP [dm6]	T	G	4.413e^-5	0.856	INTRON Toll-4
X	4768640	X_4768640_SNP [dm3] X_4874607_SNP [dm6]	C	T	4.590e^-5	0.856	UPSTREAM CR43495 INTRON CG42594
3R	24280933	3R_24280933_SNP [dm3] 3R_28455211_SNP [dm6]	T	A	4.715e^-5	0.856	INTRON beat-VI
2L	9096365	2L_9096365_SNP [dm3] 2L_9096365_SNP [dm6]	T	G	4.768e^-5	0.856	INTERGENIC	TF binding site mE1_TFBS_sens
2R	16121158	2R_16121158_SNP [dm3] 2R_20233653_SNP [dm6]	C	T	4.773e^-5	0.856	SYNONYMOUS_CODING CG11044 DOWNSTREAM tRNA:G3:56EFb
2L	15631368	2L_15631368_SNP [dm3] 2L_15631368_SNP [dm6]	G	A	4.787e^-5	0.856	SYNONYMOUS_CODING CG18480	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	15631374	2L_15631374_SNP [dm3] 2L_15631374_SNP [dm6]	A	T	4.787e^-5	0.856	SYNONYMOUS_CODING CG18480	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	19836044	3R_19836044_SNP [dm3] 3R_24010322_SNP [dm6]	T	A	4.922e^-5	0.856	INTRON KrT95D
2L	8661090	2L_8661090_SNP [dm3] 2L_8661090_SNP [dm6]	G	A	4.925e^-5	0.856	INTRON Sema-1a
2L	9097057	2L_9097057_SNP [dm3] 2L_9097057_SNP [dm6]	C	T	4.933e^-5	0.856	UPSTREAM CG31609 INTERGENIC
2R	11017772	2R_11017772_SNP [dm3] 2R_15130267_SNP [dm6]	A	G	4.966e^-5	0.856	INTRON chn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr
2L	6134629	2L_6134629_SNP [dm3] 2L_6134629_SNP [dm6]	A	T	5.069e^-5	0.856	UPSTREAM CR45719 INTERGENIC
3R	5695673	3R_5695673_SNP [dm3] 3R_9869951_SNP [dm6]	C	G	5.074e^-5	0.856	INTERGENIC
3L	15090986	3L_15090986_SNP [dm3] 3L_15097886_SNP [dm6]	T	A	5.142e^-5	0.856	UPSTREAM CTPsyn DOWNSTREAM CR43973 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2R	11005310	2R_11005310_SNP [dm3] 2R_15117805_SNP [dm6]	A	T	5.376e^-5	0.856	INTRON chn	TF binding site BDTNP1_TFBS_dl
X	7000160	X_7000160_SNP [dm3] X_7106127_SNP [dm6]	C	G	5.382e^-5	0.856	UTR_3_PRIME CG8300 DOWNSTREAM fz4	TF binding site BDTNP1_TFBS_da
X	13780495	X_13780495_SNP [dm3] X_13886462_SNP [dm6]	G	A	5.424e^-5	0.856	INTRON mamo
2L	18774061	2L_18774061_SNP [dm3] 2L_18774061_SNP [dm6]	A	T	5.425e^-5	0.856	UPSTREAM CR43804 INTRON ham

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By genomic position
Variant impact
Gene name

W6 Vial 4 ascension (cm) phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results