DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=9.209e^-1)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_3R_P	0.04288

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
wolba	5.006	0.0253
In_3R_P	2.7143	0.0995

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

788 significant hits at p-value < 0.001.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2R	20627703	2R_20627703_SNP [dm3] 2R_24740180_SNP [dm6]	T	G	6.585e^-5	0.943	UPSTREAM CR44828 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	6989556	2R_6989556_SNP [dm3] 2R_11102051_SNP [dm6]	G	A	6.585e^-5	0.943	INTRON luna	TF binding site mE1_TFBS_cad
X	17540649	X_17540649_SNP [dm3] X_17646616_SNP [dm6]	G	A	6.585e^-5	0.943	INTRON RhoGAPp190
X	17540674	X_17540674_SNP [dm3] X_17646641_SNP [dm6]	A	G	6.585e^-5	0.943	INTRON RhoGAPp190
2R	1803877	2R_1803877_SNP [dm3] 2R_5916372_SNP [dm6]	A	G	1.142e^-4	0.943	INTRON CG43366
2R	10417001	2R_10417001_SNP [dm3] 2R_14529496_SNP [dm6]	A	T	1.147e^-4	0.943	INTRON ttv
2R	17441747	2R_17441747_SNP [dm3] 2R_21554242_SNP [dm6]	G	T	1.186e^-4	0.943	INTRON Egfr	TF binding site mE1_TFBS_HSA
X	17078271	X_17078271_SNP [dm3] X_17184238_SNP [dm6]	T	C	1.186e^-4	0.943	UPSTREAM CR44026 INTRON baz
2R	10028999	2R_10028999_SNP [dm3] 2R_14141494_SNP [dm6]	A	G	1.417e^-4	0.943	UPSTREAM Prosap INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_ttk mE1_TFBS_Ubx
2R	20373901	2R_20373901_SNP [dm3] 2R_24486378_SNP [dm6]	A	G	1.417e^-4	0.943	INTRON CG13579	TF binding site mE1_TFBS_cad
2R	20474931	2R_20474931_SNP [dm3] 2R_24587408_SNP [dm6]	C	A	1.417e^-4	0.943	UPSTREAM pio INTRON pio
2L	5601013	2L_5601013_SNP [dm3] 2L_5601013_SNP [dm6]	T	C	1.425e^-4	0.943	DOWNSTREAM CG14010 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
2L	7601208	2L_7601208_SNP [dm3] 2L_7601208_SNP [dm6]	A	G	1.480e^-4	0.943	INTERGENIC
3L	3949872	3L_3949872_SNP [dm3] 3L_3949872_SNP [dm6]	T	C	1.480e^-4	0.943	UPSTREAM CG14983 INTERGENIC
X	9084014	X_9084014_SNP [dm3] X_9189981_SNP [dm6]	G	C	1.494e^-4	0.943	NON_SYNONYMOUS_CODING CG12115 DOWNSTREAM mei-P26
3L	10861129	3L_10861129_SNP [dm3] 3L_10868029_SNP [dm6]	A	G	1.515e^-4	0.943	INTRON tna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	11943091	3L_11943091_SNP [dm3] 3L_11949991_SNP [dm6]	A	G	1.515e^-4	0.943	NON_SYNONYMOUS_CODING CG17826 DOWNSTREAM CG7252
3L	11943153	3L_11943153_SNP [dm3] 3L_11950053_SNP [dm6]	T	C	1.515e^-4	0.943	SYNONYMOUS_CODING CG17826 DOWNSTREAM CG7252
3L	11943294	3L_11943294_SNP [dm3] 3L_11950194_SNP [dm6]	A	G	1.515e^-4	0.943	SYNONYMOUS_CODING CG17826 DOWNSTREAM CG7252
3L	11943303	3L_11943303_SNP [dm3] 3L_11950203_SNP [dm6]	A	G	1.515e^-4	0.943	SYNONYMOUS_CODING CG17826 DOWNSTREAM CG7252
3L	17687735	3L_17687735_SNP [dm3] 3L_17694635_SNP [dm6]	T	C	1.515e^-4	0.943	INTRON Ccn
3L	4971834	3L_4971834_SNP [dm3] 3L_4971834_SNP [dm6]	A	C	1.515e^-4	0.943	INTRON Con
3L	5899543	3L_5899543_SNP [dm3] 3L_5906443_SNP [dm6]	A	G	1.515e^-4	0.943	NON_SYNONYMOUS_CODING CG10486 UPSTREAM CG13288	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	5900313	3L_5900313_SNP [dm3] 3L_5907213_SNP [dm6]	C	G	1.515e^-4	0.943	UPSTREAM CG13288 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	6027432	3L_6027432_SNP [dm3] 3L_6034332_SNP [dm6]	A	G	1.515e^-4	0.943	UPSTREAM yip7 INTRON CG10477
3L	6027451	3L_6027451_SNP [dm3] 3L_6034351_SNP [dm6]	G	A	1.515e^-4	0.943	SYNONYMOUS_CODING CG10477 UPSTREAM yip7
3L	6027472	3L_6027472_SNP [dm3] 3L_6034372_SNP [dm6]	T	A	1.515e^-4	0.943	SYNONYMOUS_CODING CG10477 UPSTREAM yip7
3L	9692038	3L_9692038_SNP [dm3] 3L_9698938_SNP [dm6]	G	C	1.515e^-4	0.943	INTRON UbcD4	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	9692060	3L_9692060_SNP [dm3] 3L_9698960_SNP [dm6]	G	A	1.515e^-4	0.943	SPLICE_SITE_REGION UbcD4 INTRON UbcD4	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	9948018	3L_9948018_SNP [dm3] 3L_9954918_SNP [dm6]	C	T	1.515e^-4	0.943	INTRON CG34356
3R	21356972	3R_21356972_SNP [dm3] 3R_25531250_SNP [dm6]	T	A	1.515e^-4	0.943	INTRON msi
3R	21357127	3R_21357127_SNP [dm3] 3R_25531405_SNP [dm6]	A	C	1.515e^-4	0.943	INTRON msi
X	8719259	X_8719259_INS [dm3] X_8825226_INS [dm6]	A	GC	1.515e^-4	0.943	INTERGENIC
X	8719261	X_8719261_SNP [dm3] X_8825228_SNP [dm6]	C	A	1.515e^-4	0.943	INTERGENIC
X	8719265	X_8719265_SNP [dm3] X_8825232_SNP [dm6]	G	T	1.515e^-4	0.943	INTERGENIC
3L	17687731	3L_17687731_SNP [dm3] 3L_17694631_SNP [dm6]	T	A	1.605e^-4	0.943	INTRON Ccn
2R	20329772	2R_20329772_SNP [dm3] 2R_24442249_SNP [dm6]	T	A	1.689e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_hb
3R	26599230	3R_26599230_SNP [dm3] 3R_30773508_SNP [dm6]	C	T	1.689e^-4	0.943	INTRON zfh1	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl
2R	10417036	2R_10417036_SNP [dm3] 2R_14529531_SNP [dm6]	G	A	1.741e^-4	0.943	INTRON ttv
2L	6379900	2L_6379900_SNP [dm3] 2L_6379900_SNP [dm6]	T	C	1.788e^-4	0.943	INTRON CG42368
2R	9962745	2R_9962745_DEL [dm3] 2R_14075240_DEL [dm6]	AA	A	1.788e^-4	0.943	INTRON Prosap
2R	13367827	2R_13367827_SNP [dm3] 2R_17480322_SNP [dm6]	C	A	1.950e^-4	0.943	UTR_3_PRIME CG43110 INTRON veil	TF binding site mE1_TFBS_cad
2R	17112331	2R_17112331_SNP [dm3] 2R_21224826_SNP [dm6]	G	C	1.950e^-4	0.943	UPSTREAM ASPP INTRON ASPP
2R	19052996	2R_19052996_SNP [dm3] 2R_23165473_SNP [dm6]	C	A	1.950e^-4	0.943	INTRON CG34371	TF binding site BDTNP1_TFBS_twi
3L	11819188	3L_11819188_SNP [dm3] 3L_11826088_SNP [dm6]	G	A	1.950e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	11819210	3L_11819210_INS [dm3] 3L_11826110_INS [dm6]	C	CTATGTC	1.950e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	11819215	3L_11819215_SNP [dm3] 3L_11826115_SNP [dm6]	G	A	1.950e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	11819226	3L_11819226_DEL [dm3] 3L_11826126_DEL [dm6]	CGAGTC	C	1.950e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	11819237	3L_11819237_SNP [dm3] 3L_11826137_SNP [dm6]	G	C	1.950e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	11819383	3L_11819383_SNP [dm3] 3L_11826283_SNP [dm6]	A	C	1.950e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	11819548	3L_11819548_SNP [dm3] 3L_11826448_SNP [dm6]	C	A	1.950e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	12611856	3L_12611856_SNP [dm3] 3L_12618756_SNP [dm6]	C	T	1.950e^-4	0.943	INTRON caup
3L	13732427	3L_13732427_SNP [dm3] 3L_13739327_SNP [dm6]	C	T	1.950e^-4	0.943	INTRON bru-3
3L	1689748	3L_1689748_SNP [dm3] 3L_1689748_SNP [dm6]	A	T	1.950e^-4	0.943	INTRON CG7991
3L	1700239	3L_1700239_SNP [dm3] 3L_1700239_SNP [dm6]	C	T	1.950e^-4	0.943	DOWNSTREAM CG13931 INTRON CG7991	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_sna mE1_TFBS_HSA
3L	3629245	3L_3629245_SNP [dm3] 3L_3629245_SNP [dm6]	A	T	1.950e^-4	0.943	INTRON dar1
3L	6673515	3L_6673515_SNP [dm3] 3L_6680415_SNP [dm6]	G	T	1.950e^-4	0.943	INTERGENIC
X	16841651	X_16841651_SNP [dm3] X_16947618_SNP [dm6]	A	T	1.950e^-4	0.943	DOWNSTREAM CG13000 INTRON RhoGAP15B
X	16841725	X_16841725_SNP [dm3] X_16947692_SNP [dm6]	T	C	1.950e^-4	0.943	DOWNSTREAM CG13000 INTRON RhoGAP15B
X	16841797	X_16841797_SNP [dm3] X_16947764_SNP [dm6]	T	C	1.950e^-4	0.943	DOWNSTREAM CG13000 INTRON RhoGAP15B
X	4536891	X_4536891_SNP [dm3] X_4642858_SNP [dm6]	G	C	1.950e^-4	0.943	INTRON CG3081 & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	8242576	X_8242576_SNP [dm3] X_8348543_SNP [dm6]	A	G	1.950e^-4	0.943	INTRON nAChRalpha3
3L	13842661	3L_13842661_SNP [dm3] 3L_13849561_SNP [dm6]	C	T	2.235e^-4	0.943	SYNONYMOUS_CODING Hml
3L	13842803	3L_13842803_SNP [dm3] 3L_13849703_SNP [dm6]	G	A	2.235e^-4	0.943	INTRON Hml
3L	13842828	3L_13842828_SNP [dm3] 3L_13849728_SNP [dm6]	C	A	2.235e^-4	0.943	INTRON Hml
3L	9295216	3L_9295216_DEL [dm3] 3L_9302116_DEL [dm6]	TT	T	2.235e^-4	0.943	INTERGENIC
X	10530023	X_10530023_SNP [dm3] X_10635990_SNP [dm6]	T	C	2.288e^-4	0.943	INTRON X11Lbeta
3L	1866710	3L_1866710_SNP [dm3] 3L_1866710_SNP [dm6]	C	A	2.336e^-4	0.943	INTRON CG12025	TF binding site mE1_TFBS_cad
3L	9225005	3L_9225005_SNP [dm3] 3L_9231905_SNP [dm6]	G	A	2.336e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_inv
2L	20289867	2L_20289867_SNP [dm3] 2L_20289867_SNP [dm6]	A	G	2.401e^-4	0.943	INTERGENIC
2L	4933552	2L_4933552_SNP [dm3] 2L_4933552_SNP [dm6]	C	T	2.506e^-4	0.943	SYNONYMOUS_CODING hoe2
3R	21357066	3R_21357066_SNP [dm3] 3R_25531344_SNP [dm6]	T	A	2.542e^-4	0.943	INTRON msi
3R	21357075	3R_21357075_SNP [dm3] 3R_25531353_SNP [dm6]	A	G	2.542e^-4	0.943	INTRON msi
3R	21357088	3R_21357088_SNP [dm3] 3R_25531366_SNP [dm6]	A	G	2.542e^-4	0.943	INTRON msi
2R	18168406	2R_18168406_SNP [dm3] 2R_22280901_SNP [dm6]	T	C	2.544e^-4	0.943	INTRON dve
2L	7192212	2L_7192212_SNP [dm3] 2L_7192212_SNP [dm6]	T	A	2.549e^-4	0.943	INTRON CG4497	TF binding site mE1_TFBS_inv
3L	9221875	3L_9221875_SNP [dm3] 3L_9228775_SNP [dm6]	G	A	2.554e^-4	0.943	INTERGENIC
3L	4057579	3L_4057579_SNP [dm3] 3L_4057579_SNP [dm6]	C	G	2.568e^-4	0.943	NON_SYNONYMOUS_CODING CG1136	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	10417114	2R_10417114_INS [dm3] 2R_14529609_INS [dm6]	G	GG	2.571e^-4	0.943	INTRON ttv
2L	4078444	2L_4078444_SNP [dm3] 2L_4078444_SNP [dm6]	C	T	2.619e^-4	0.943	INTRON ed
2R	11820792	2R_11820792_SNP [dm3] 2R_15933287_SNP [dm6]	T	G	2.668e^-4	0.943	NON_SYNONYMOUS_CODING Iap2	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3L	10537663	3L_10537663_SNP [dm3] 3L_10544563_SNP [dm6]	T	G	2.678e^-4	0.943	INTRON A2bp1
3L	465564	3L_465564_SNP [dm3] 3L_465564_SNP [dm6]	A	C	2.681e^-4	0.943	INTRON klar
3L	465582	3L_465582_SNP [dm3] 3L_465582_SNP [dm6]	A	G	2.681e^-4	0.943	INTRON klar
3R	15156112	3R_15156112_DEL [dm3] 3R_19330390_DEL [dm6]	GAGTAGC	A	2.684e^-4	0.943	EXON CR43258	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4993282	3L_4993282_SNP [dm3] 3L_4993282_SNP [dm6]	A	G	2.692e^-4	0.943	DOWNSTREAM CG32232 INTRON Con	TF binding site mE1_TFBS_HSA
2R	18173625	2R_18173625_INS [dm3] 2R_22286120_INS [dm6]	C	CC	2.714e^-4	0.943	UTR_3_PRIME dve
2R	10274800	2R_10274800_SNP [dm3] 2R_14387295_SNP [dm6]	T	C	2.738e^-4	0.943	INTERGENIC
2R	10344064	2R_10344064_SNP [dm3] 2R_14456559_SNP [dm6]	A	G	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344066	2R_10344066_SNP [dm3] 2R_14456561_SNP [dm6]	T	A	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344067	2R_10344067_SNP [dm3] 2R_14456562_SNP [dm6]	G	C	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344070	2R_10344070_SNP [dm3] 2R_14456565_SNP [dm6]	G	C	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344071	2R_10344071_INS [dm3] 2R_14456566_INS [dm6]	A	ACT	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344543	2R_10344543_SNP [dm3] 2R_14457038_SNP [dm6]	T	C	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl
2R	10344621	2R_10344621_SNP [dm3] 2R_14457116_SNP [dm6]	C	G	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl
2R	10344627	2R_10344627_SNP [dm3] 2R_14457122_SNP [dm6]	T	C	2.738e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl
2R	10345297	2R_10345297_SNP [dm3] 2R_14457792_SNP [dm6]	G	T	2.738e^-4	0.943	UPSTREAM Oaz INTRON Oaz	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2R	10345346	2R_10345346_SNP [dm3] 2R_14457841_SNP [dm6]	T	G	2.738e^-4	0.943	UPSTREAM Oaz INTRON Oaz	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2R	10346210	2R_10346210_SNP [dm3] 2R_14458705_SNP [dm6]	G	T	2.738e^-4	0.943	UTR_5_PRIME Oaz INTRON Oaz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2R	20627546	2R_20627546_SNP [dm3] 2R_24740023_SNP [dm6]	A	C	2.738e^-4	0.943	UPSTREAM CR44828 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	4150474	2R_4150474_SNP [dm3] 2R_8262969_SNP [dm6]	C	T	2.738e^-4	0.943	SYNONYMOUS_CODING CG12126 DOWNSTREAM CG30376
2R	6531288	2R_6531288_SNP [dm3] 2R_10643783_SNP [dm6]	C	T	2.738e^-4	0.943	INTRON Git	TF binding site mE1_TFBS_HSA
3L	1240404	3L_1240404_SNP [dm3] 3L_1240404_SNP [dm6]	T	C	2.738e^-4	0.943	SYNONYMOUS_CODING CG9194	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	1240677	3L_1240677_SNP [dm3] 3L_1240677_SNP [dm6]	T	C	2.738e^-4	0.943	SYNONYMOUS_CODING CG9194 DOWNSTREAM Klp61F	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	9372232	3R_9372232_SNP [dm3] 3R_13546510_SNP [dm6]	T	A	2.738e^-4	0.943	INTERGENIC
X	12186069	X_12186069_SNP [dm3] X_12292036_SNP [dm6]	A	T	2.738e^-4	0.943	INTRON Ten-a
X	21875603	X_21875603_SNP [dm3] X_22473767_SNP [dm6]	A	C	2.738e^-4	0.943	UTR_5_PRIME CG14618	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
X	21875628	X_21875628_SNP [dm3] X_22473792_SNP [dm6]	A	C	2.738e^-4	0.943	UTR_5_PRIME CG14618	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
X	9294506	X_9294506_SNP [dm3] X_9400473_SNP [dm6]	C	T	2.738e^-4	0.943	INTRON mgl
3R	26944010	3R_26944010_DEL [dm3] 3R_31118288_DEL [dm6]	AA	A	2.747e^-4	0.943	INTERGENIC
2R	12657750	2R_12657750_SNP [dm3] 2R_16770245_SNP [dm6]	T	A	2.765e^-4	0.943	INTRON unc-104
X	5871359	X_5871359_SNP [dm3] X_5977326_SNP [dm6]	T	G	2.765e^-4	0.943	INTRON Grip	TF binding site BDTNP1_TFBS_dl
2R	3612113	2R_3612113_SNP [dm3] 2R_7724608_SNP [dm6]	G	C	2.801e^-4	0.943	INTRON CG18812
2L	752148	2L_752148_SNP [dm3] 2L_752148_SNP [dm6]	G	A	2.809e^-4	0.943	UPSTREAM GABA-B-R3 INTRON GABA-B-R3
X	16076516	X_16076516_SNP [dm3] X_16182483_SNP [dm6]	C	T	2.908e^-4	0.943	INTERGENIC
3L	7210529	3L_7210529_SNP [dm3] 3L_7217429_SNP [dm6]	A	G	2.915e^-4	0.943	INTERGENIC
3L	11632796	3L_11632796_SNP [dm3] 3L_11639696_SNP [dm6]	G	T	2.928e^-4	0.943	INTRON CG32091
3L	848118	3L_848118_SNP [dm3] 3L_848118_SNP [dm6]	A	G	2.928e^-4	0.943	SYNONYMOUS_CODING CG13889	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	15157679	3R_15157679_SNP [dm3] 3R_19331957_SNP [dm6]	G	T	2.928e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	15157680	3R_15157680_SNP [dm3] 3R_19331958_SNP [dm6]	T	A	2.928e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	15157682	3R_15157682_SNP [dm3] 3R_19331960_SNP [dm6]	C	G	2.928e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	19964868	3R_19964868_SNP [dm3] 3R_24139146_SNP [dm6]	G	A	2.928e^-4	0.943	INTRON Npc2f	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	19964877	3R_19964877_SNP [dm3] 3R_24139155_SNP [dm6]	A	G	2.928e^-4	0.943	INTRON Npc2f	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	5678089	3R_5678089_SNP [dm3] 3R_9852367_SNP [dm6]	A	G	2.928e^-4	0.943	INTRON Teh1
3R	8555035	3R_8555035_SNP [dm3] 3R_12729313_SNP [dm6]	T	C	2.928e^-4	0.943	DOWNSTREAM CR44231 INTERGENIC
3R	13687900	3R_13687900_SNP [dm3] 3R_17862178_SNP [dm6]	A	G	2.973e^-4	0.943	INTRON tinc
3R	21669667	3R_21669667_SNP [dm3] 3R_25843945_SNP [dm6]	C	A	2.973e^-4	0.943	EXON CR45653
3R	4824642	3R_4824642_SNP [dm3] 3R_8998920_SNP [dm6]	T	A	2.973e^-4	0.943	DOWNSTREAM CG11977 INTRON CG31100
2R	4957694	2R_4957694_SNP [dm3] 2R_9070189_SNP [dm6]	T	C	2.982e^-4	0.943	INTRON ana
2R	4967686	2R_4967686_SNP [dm3] 2R_9080181_SNP [dm6]	A	C	3.015e^-4	0.943	INTRON CG8083
3R	8079190	3R_8079190_SNP [dm3] 3R_12253468_SNP [dm6]	G	T	3.031e^-4	0.943	UPSTREAM CG3942 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
2R	12701899	2R_12701899_INS [dm3] 2R_16814394_INS [dm6]	G	GGG	3.040e^-4	0.943	EXON CR44380
3R	9740640	3R_9740640_SNP [dm3] 3R_13914918_SNP [dm6]	G	C	3.177e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	18867628	2L_18867628_SNP [dm3] 2L_18867628_SNP [dm6]	C	G	3.204e^-4	0.943	UPSTREAM mir-4946 INTRON tup	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	7418411	3L_7418411_SNP [dm3] 3L_7425311_SNP [dm6]	A	C	3.268e^-4	0.943	INTRON CG42458
3L	7418413	3L_7418413_SNP [dm3] 3L_7425313_SNP [dm6]	A	T	3.268e^-4	0.943	INTRON CG42458
3L	7418424	3L_7418424_INS [dm3] 3L_7425324_INS [dm6]	T	TT	3.268e^-4	0.943	INTRON CG42458
3L	7418426	3L_7418426_SNP [dm3] 3L_7425326_SNP [dm6]	C	T	3.268e^-4	0.943	INTRON CG42458
2L	3880350	2L_3880350_SNP [dm3] 2L_3880350_SNP [dm6]	A	G	3.419e^-4	0.943	UPSTREAM capu INTRON capu
2L	3880357	2L_3880357_DEL [dm3] 2L_3880357_DEL [dm6]	CT	C	3.419e^-4	0.943	UPSTREAM capu INTRON capu
2L	4933543	2L_4933543_SNP [dm3] 2L_4933543_SNP [dm6]	G	T	3.419e^-4	0.943	SYNONYMOUS_CODING hoe2
3L	19665267	3L_19665267_SNP [dm3] 3L_19672167_SNP [dm6]	T	A	3.423e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_HSA
2L	16801221	2L_16801221_SNP [dm3] 2L_16801221_SNP [dm6]	G	A	3.493e^-4	0.943	SYNONYMOUS_CODING Ugt36Bc DOWNSTREAM CG13280	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	12702130	2R_12702130_SNP [dm3] 2R_16814625_SNP [dm6]	A	T	3.494e^-4	0.943	EXON CR44380
2R	12702131	2R_12702131_SNP [dm3] 2R_16814626_SNP [dm6]	C	T	3.494e^-4	0.943	EXON CR44380
2R	17217375	2R_17217375_SNP [dm3] 2R_21329870_SNP [dm6]	A	C	3.494e^-4	0.943	UPSTREAM snoRNA:Psi28S-3316c & 4 others DOWNSTREAM snoRNA:Psi28S-3378 INTRON dom	TF binding site mE1_TFBS_cad
2R	4958680	2R_4958680_SNP [dm3] 2R_9071175_SNP [dm6]	G	C	3.494e^-4	0.943	INTRON ana	TF binding site BDTNP1_TFBS_Mad BDTNP1_TFBS_Med mE1_TFBS_cad
2R	4959049	2R_4959049_SNP [dm3] 2R_9071544_SNP [dm6]	G	C	3.494e^-4	0.943	INTRON ana	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_shn mE1_TFBS_cad
3L	6295006	3L_6295006_SNP [dm3] 3L_6301906_SNP [dm6]	G	A	3.494e^-4	0.943	DOWNSTREAM CR45420 INTERGENIC	TF binding site mE1_TFBS_cad
3L	6295040	3L_6295040_SNP [dm3] 3L_6301940_SNP [dm6]	C	T	3.494e^-4	0.943	DOWNSTREAM CR45420 INTERGENIC	TF binding site mE1_TFBS_cad
3L	6295066	3L_6295066_SNP [dm3] 3L_6301966_SNP [dm6]	T	G	3.494e^-4	0.943	DOWNSTREAM CR45420 INTERGENIC	TF binding site mE1_TFBS_cad
3L	6295069	3L_6295069_SNP [dm3] 3L_6301969_SNP [dm6]	T	G	3.494e^-4	0.943	DOWNSTREAM CR45420 INTERGENIC	TF binding site mE1_TFBS_cad
3R	7876014	3R_7876014_SNP [dm3] 3R_12050292_SNP [dm6]	C	T	3.494e^-4	0.943	INTERGENIC
3R	9740613	3R_9740613_SNP [dm3] 3R_13914891_SNP [dm6]	A	G	3.494e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	9740645	3R_9740645_SNP [dm3] 3R_13914923_SNP [dm6]	T	G	3.494e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	16171663	X_16171663_SNP [dm3] X_16277630_SNP [dm6]	C	T	3.494e^-4	0.943	UPSTREAM eas DOWNSTREAM Prosalpha4 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Ubx
X	21071799	X_21071799_SNP [dm3] X_21200772_SNP [dm6]	T	C	3.494e^-4	0.943	INTERGENIC
X	2604175	X_2604175_SNP [dm3] X_2710142_SNP [dm6]	C	T	3.494e^-4	0.943	INTRON CG2681	TF binding site mE1_TFBS_chinmo
3R	13964955	3R_13964955_SNP [dm3] 3R_18139233_SNP [dm6]	G	A	3.503e^-4	0.943	INTERGENIC
3L	11372064	3L_11372064_SNP [dm3] 3L_11378964_SNP [dm6]	C	A	3.661e^-4	0.943	INTERGENIC
2R	10417048	2R_10417048_SNP [dm3] 2R_14529543_SNP [dm6]	G	T	3.728e^-4	0.943	INTRON ttv
2R	12784213	2R_12784213_SNP [dm3] 2R_16896708_SNP [dm6]	G	A	3.734e^-4	0.943	INTERGENIC
2R	12784216	2R_12784216_SNP [dm3] 2R_16896711_SNP [dm6]	C	T	3.734e^-4	0.943	INTERGENIC
3L	9514078	3L_9514078_SNP [dm3] 3L_9520978_SNP [dm6]	A	G	3.777e^-4	0.943	INTRON CG33700
3R	8038282	3R_8038282_SNP [dm3] 3R_12212560_SNP [dm6]	A	T	3.823e^-4	0.943	INTERGENIC	transposable element FlyBase
2R	16881900	2R_16881900_SNP [dm3] 2R_20994395_SNP [dm6]	G	A	3.884e^-4	0.943	UPSTREAM Prosalpha3 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc
2R	16882261	2R_16882261_SNP [dm3] 2R_20994756_SNP [dm6]	C	T	3.884e^-4	0.943	UPSTREAM Prosalpha3 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_cnc
3R	7775086	3R_7775086_SNP [dm3] 3R_11949364_SNP [dm6]	A	G	3.888e^-4	0.943	UPSTREAM CG31211 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3R	21309613	3R_21309613_SNP [dm3] 3R_25483891_SNP [dm6]	A	C	3.938e^-4	0.943	SYNONYMOUS_CODING CG5116 UTR_3_PRIME CG42488	TF binding site mE1_TFBS_cad mE1_TFBS_ttk
3L	1435620	3L_1435620_SNP [dm3] 3L_1435620_SNP [dm6]	G	A	3.944e^-4	0.943	SYNONYMOUS_CODING SA-2 INTRON Ptp61F	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	5797121	3L_5797121_SNP [dm3] 3L_5804021_SNP [dm6]	A	G	3.944e^-4	0.943	START_GAINED CG42272 UTR_5_PRIME CG42272 INTRON S6k & 1 other	TF binding site BDTNP1_TFBS_twi
3L	11266914	3L_11266914_SNP [dm3] 3L_11273814_SNP [dm6]	T	A	3.945e^-4	0.943	DOWNSTREAM CR44720 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	1983460	2L_1983460_SNP [dm3] 2L_1983460_SNP [dm6]	G	A	3.949e^-4	0.943	SYNONYMOUS_CODING CG7289	TF binding site mE1_TFBS_sens
2L	1983490	2L_1983490_SNP [dm3] 2L_1983490_SNP [dm6]	C	T	3.949e^-4	0.943	SYNONYMOUS_CODING CG7289	TF binding site mE1_TFBS_sens
2R	10441231	2R_10441231_SNP [dm3] 2R_14553726_SNP [dm6]	A	G	3.954e^-4	0.943	DOWNSTREAM CG43919 INTRON ttv
2R	11536614	2R_11536614_SNP [dm3] 2R_15649109_SNP [dm6]	T	C	3.954e^-4	0.943	INTRON CG42524	TF binding site mE1_TFBS_Trl
3L	848088	3L_848088_SNP [dm3] 3L_848088_SNP [dm6]	C	T	4.058e^-4	0.943	SYNONYMOUS_CODING CG13889	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	7889440	2R_7889440_SNP [dm3] 2R_12001935_SNP [dm6]	T	A	4.066e^-4	0.943	UTR_3_PRIME otk
2L	7702477	2L_7702477_SNP [dm3] 2L_7702477_SNP [dm6]	A	T	4.100e^-4	0.943	UPSTREAM Tep2 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA
2L	14898134	2L_14898134_SNP [dm3] 2L_14898134_SNP [dm6]	A	T	4.107e^-4	0.943	INTERGENIC
2L	15498768	2L_15498768_SNP [dm3] 2L_15498768_SNP [dm6]	A	T	4.108e^-4	0.943	UPSTREAM lace INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA
2L	9343933	2L_9343933_SNP [dm3] 2L_9343933_SNP [dm6]	G	A	4.118e^-4	0.943	SYNONYMOUS_CODING CG3748
X	17181497	X_17181497_SNP [dm3] X_17287464_SNP [dm6]	A	G	4.160e^-4	0.943	SYNONYMOUS_CODING Fim INTRON CG5445	TF binding site mE1_TFBS_HSA
2R	15906348	2R_15906348_SNP [dm3] 2R_20018843_SNP [dm6]	G	A	4.319e^-4	0.943	INTERGENIC
2R	17976291	2R_17976291_SNP [dm3] 2R_22088786_SNP [dm6]	C	T	4.319e^-4	0.943	UPSTREAM CG13502 DOWNSTREAM CG43393 INTERGENIC
2R	10329676	2R_10329676_SNP [dm3] 2R_14442171_SNP [dm6]	A	G	4.387e^-4	0.943	INTRON Oaz	TF binding site mE1_TFBS_cad
2R	15544591	2R_15544591_SNP [dm3] 2R_19657086_SNP [dm6]	G	C	4.387e^-4	0.943	UPSTREAM CG15125 EXON CR44214
2R	15544602	2R_15544602_SNP [dm3] 2R_19657097_SNP [dm6]	A	T	4.387e^-4	0.943	UPSTREAM CG15125 EXON CR44214
3L	9794886	3L_9794886_SNP [dm3] 3L_9801786_SNP [dm6]	A	G	4.387e^-4	0.943	SYNONYMOUS_CODING Ilp3 INTRON CG32052	TF binding site mE1_TFBS_cad
3L	7125745	3L_7125745_SNP [dm3] 3L_7132645_SNP [dm6]	A	T	4.431e^-4	0.943	SPLICE_SITE_REGION Dbi UTR_5_PRIME Dbi INTRON Dbi	TF binding site BDTNP1_TFBS_da
3R	11387007	3R_11387007_DEL [dm3] 3R_15561285_DEL [dm6]	GG	G	4.432e^-4	0.943	INTERGENIC
X	5783889	X_5783889_SNP [dm3] X_5889856_SNP [dm6]	G	A	4.479e^-4	0.943	INTRON CR45668	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
3L	16533889	3L_16533889_INS [dm3] 3L_16540789_INS [dm6]	A	AA	4.534e^-4	0.943	INTRON CG43373
3L	16533892	3L_16533892_SNP [dm3] 3L_16540792_SNP [dm6]	A	C	4.534e^-4	0.943	INTRON CG43373
3L	16533894	3L_16533894_SNP [dm3] 3L_16540794_SNP [dm6]	A	T	4.534e^-4	0.943	INTRON CG43373
2R	15544621	2R_15544621_SNP [dm3] 2R_19657116_SNP [dm6]	A	C	4.547e^-4	0.943	UPSTREAM CG15125 EXON CR44214
3L	1294234	3L_1294234_SNP [dm3] 3L_1294234_SNP [dm6]	G	A	4.576e^-4	0.943	SYNONYMOUS_CODING CG32333
3L	1305810	3L_1305810_SNP [dm3] 3L_1305810_SNP [dm6]	G	C	4.576e^-4	0.943	SYNONYMOUS_CODING CG2277	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	1305813	3L_1305813_SNP [dm3] 3L_1305813_SNP [dm6]	C	T	4.576e^-4	0.943	SYNONYMOUS_CODING CG2277	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	21274151	3R_21274151_SNP [dm3] 3R_25448429_SNP [dm6]	A	T	4.576e^-4	0.943	INTRON Fur1	TF binding site BDTNP1_TFBS_twi
3R	10848781	3R_10848781_SNP [dm3] 3R_15023059_SNP [dm6]	T	G	4.606e^-4	0.943	INTERGENIC
3R	4824664	3R_4824664_SNP [dm3] 3R_8998942_SNP [dm6]	A	G	4.691e^-4	0.943	DOWNSTREAM CG11977 INTRON CG31100
2L	16794997	2L_16794997_SNP [dm3] 2L_16794997_SNP [dm6]	T	C	4.698e^-4	0.943	SYNONYMOUS_CODING Ugt36Ba	TF binding site mE1_TFBS_sens mE1_TFBS_Trl
X	16838879	X_16838879_SNP [dm3] X_16944846_SNP [dm6]	A	T	4.729e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	4032995	3L_4032995_SNP [dm3] 3L_4032995_SNP [dm6]	T	C	4.776e^-4	0.943	SYNONYMOUS_CODING Gr64d UTR_5_PRIME Gr64e UPSTREAM Gr64e DOWNSTREAM Gr64b & 1 other
3R	17362076	3R_17362076_SNP [dm3] 3R_21536354_SNP [dm6]	G	A	4.776e^-4	0.943	DOWNSTREAM CR44033 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	17362102	3R_17362102_SNP [dm3] 3R_21536380_SNP [dm6]	C	T	4.776e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	17976284	2R_17976284_SNP [dm3] 2R_22088779_SNP [dm6]	C	A	4.837e^-4	0.943	UPSTREAM CG13502 DOWNSTREAM CG43393 INTERGENIC
X	8006542	X_8006542_SNP [dm3] X_8112509_SNP [dm6]	A	T	4.856e^-4	0.943	INTRON Gclc
2R	18180962	2R_18180962_SNP [dm3] 2R_22293457_SNP [dm6]	T	G	4.858e^-4	0.943	UTR_5_PRIME CG5819 INTRON CG5819
X	17184453	X_17184453_SNP [dm3] X_17290420_SNP [dm6]	T	C	4.858e^-4	0.943	INTRON CG5445 & 1 other
X	19947700	X_19947700_SNP [dm3] X_20053667_SNP [dm6]	G	A	4.858e^-4	0.943	INTRON Dop2R
2R	13111534	2R_13111534_SNP [dm3] 2R_17224029_SNP [dm6]	G	C	4.903e^-4	0.943	INTRON mbl	TF binding site mE1_TFBS_HSA
X	10817826	X_10817826_SNP [dm3] X_10923793_SNP [dm6]	A	C	4.903e^-4	0.943	UPSTREAM v DOWNSTREAM CG43901 INTERGENIC
X	10817953	X_10817953_INS [dm3] X_10923920_INS [dm6]	C	CACT	4.903e^-4	0.943	UPSTREAM v DOWNSTREAM CG43901 INTERGENIC
2L	5296744	2L_5296744_SNP [dm3] 2L_5296744_SNP [dm6]	A	T	4.915e^-4	0.943	DOWNSTREAM CR45730 INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	5296748	2L_5296748_SNP [dm3] 2L_5296748_SNP [dm6]	C	A	4.915e^-4	0.943	DOWNSTREAM CR45730 INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	5296788	2L_5296788_SNP [dm3] 2L_5296788_SNP [dm6]	T	A	4.915e^-4	0.943	DOWNSTREAM CR45730 INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	5296847	2L_5296847_SNP [dm3] 2L_5296847_SNP [dm6]	A	T	4.915e^-4	0.943	DOWNSTREAM CR45730 INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	5296876	2L_5296876_SNP [dm3] 2L_5296876_SNP [dm6]	T	C	4.915e^-4	0.943	DOWNSTREAM CR45730 INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	5296903	2L_5296903_SNP [dm3] 2L_5296903_SNP [dm6]	T	C	4.915e^-4	0.943	DOWNSTREAM CR45730 INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	5296908	2L_5296908_SNP [dm3] 2L_5296908_SNP [dm6]	A	T	4.915e^-4	0.943	DOWNSTREAM CR45730 INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	16883227	2R_16883227_SNP [dm3] 2R_20995722_SNP [dm6]	C	T	4.963e^-4	0.943	SYNONYMOUS_CODING Prosalpha3 UPSTREAM CG10543	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2R	16765911	2R_16765911_SNP [dm3] 2R_20878406_SNP [dm6]	G	A	4.966e^-4	0.943	UTR_3_PRIME Ipk1 INTRON Ipk1
3R	26612735	3R_26612735_INS [dm3] 3R_30787013_INS [dm6]	C	CA	4.966e^-4	0.943	UTR_3_PRIME zfh1
2R	17322926	2R_17322926_SNP [dm3] 2R_21435421_SNP [dm6]	C	T	4.992e^-4	0.943	INTRON Sdc
3R	7164781	3R_7164781_SNP [dm3] 3R_11339059_SNP [dm6]	A	T	5.014e^-4	0.943	INTRON pros	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	10848771	3R_10848771_SNP [dm3] 3R_15023049_SNP [dm6]	T	A	5.063e^-4	0.943	INTERGENIC
3R	21669408	3R_21669408_SNP [dm3] 3R_25843686_SNP [dm6]	A	C	5.063e^-4	0.943	UPSTREAM CR45653 DOWNSTREAM alpha4GT2 INTERGENIC
3R	10494831	3R_10494831_SNP [dm3] 3R_14669109_SNP [dm6]	C	T	5.077e^-4	0.943	SYNONYMOUS_CODING Meltrin	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	10494840	3R_10494840_SNP [dm3] 3R_14669118_SNP [dm6]	T	C	5.077e^-4	0.943	SYNONYMOUS_CODING Meltrin	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	10499289	3R_10499289_SNP [dm3] 3R_14673567_SNP [dm6]	C	A	5.077e^-4	0.943	INTRON Meltrin	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	10854753	3R_10854753_SNP [dm3] 3R_15029031_SNP [dm6]	T	C	5.077e^-4	0.943	INTERGENIC
3R	15399792	3R_15399792_SNP [dm3] 3R_19574070_SNP [dm6]	T	A	5.077e^-4	0.943	INTRON Dys
3R	19964926	3R_19964926_SNP [dm3] 3R_24139204_SNP [dm6]	G	A	5.077e^-4	0.943	INTRON Npc2f	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	21906477	3R_21906477_SNP [dm3] 3R_26080755_SNP [dm6]	C	A	5.077e^-4	0.943	INTRON dys
3R	21906537	3R_21906537_SNP [dm3] 3R_26080815_SNP [dm6]	C	T	5.077e^-4	0.943	INTRON dys	TF binding site mE1_TFBS_cad
2R	10346040	2R_10346040_SNP [dm3] 2R_14458535_SNP [dm6]	G	T	5.128e^-4	0.943	UTR_5_PRIME Oaz INTRON Oaz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
2L	19918278	2L_19918278_SNP [dm3] 2L_19918278_SNP [dm6]	T	G	5.143e^-4	0.943	UTR_5_PRIME sick INTRON sick	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Trl
2R	11819840	2R_11819840_SNP [dm3] 2R_15932335_SNP [dm6]	C	T	5.143e^-4	0.943	UTR_3_PRIME Iap2 UPSTREAM bdg	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA
2R	9200546	2R_9200546_SNP [dm3] 2R_13313041_SNP [dm6]	C	T	5.143e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	14511399	X_14511399_INS [dm3] X_14617366_INS [dm6]	A	ACGACAGGA	5.156e^-4	0.943	INTRON NetA
2L	8391452	2L_8391452_SNP [dm3] 2L_8391452_SNP [dm6]	C	A	5.215e^-4	0.943	SYNONYMOUS_CODING CG42820
X	18250795	X_18250795_SNP [dm3] X_18356762_SNP [dm6]	G	T	5.245e^-4	0.943	UPSTREAM CG6123 INTERGENIC	transposable element FlyBase
3L	5465460	3L_5465460_SNP [dm3] 3L_5472360_SNP [dm6]	T	C	5.275e^-4	0.943	INTERGENIC
3L	5465475	3L_5465475_SNP [dm3] 3L_5472375_SNP [dm6]	G	A	5.275e^-4	0.943	INTERGENIC
3L	2417539	3L_2417539_SNP [dm3] 3L_2417539_SNP [dm6]	G	A	5.290e^-4	0.943	UPSTREAM CG45186 INTRON CG45186	TF binding site BDTNP1_TFBS_dl
2R	5288935	2R_5288935_SNP [dm3] 2R_9401430_SNP [dm6]	T	C	5.345e^-4	0.943	DOWNSTREAM wun INTRON wun	transposable element FlyBase
X	8208153	X_8208153_SNP [dm3] X_8314120_SNP [dm6]	T	G	5.366e^-4	0.943	INTRON nAChRalpha3	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	18799902	3R_18799902_SNP [dm3] 3R_22974180_SNP [dm6]	A	G	5.395e^-4	0.943	INTERGENIC
3R	18799921	3R_18799921_SNP [dm3] 3R_22974199_SNP [dm6]	A	G	5.395e^-4	0.943	INTERGENIC
3L	18925083	3L_18925083_SNP [dm3] 3L_18931983_SNP [dm6]	T	A	5.395e^-4	0.943	INTRON CG32204	TF binding site mE1_TFBS_inv
2R	17831213	2R_17831213_SNP [dm3] 2R_21943708_SNP [dm6]	G	A	5.436e^-4	0.943	SYNONYMOUS_CODING Fili	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	17218478	3L_17218478_SNP [dm3] 3L_17225378_SNP [dm6]	C	G	5.436e^-4	0.943	INTRON Rbp6
3R	25635587	3R_25635587_SNP [dm3] 3R_29809865_SNP [dm6]	C	A	5.463e^-4	0.943	INTRON ca	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	20005897	X_20005897_SNP [dm3] X_20111864_SNP [dm6]	A	T	5.463e^-4	0.943	INTERGENIC
X	21071690	X_21071690_SNP [dm3] X_21200663_SNP [dm6]	A	G	5.463e^-4	0.943	INTERGENIC
X	8942786	X_8942786_SNP [dm3] X_9048753_SNP [dm6]	T	G	5.463e^-4	0.943	INTRON CG42388 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Trl
2R	10343323	2R_10343323_SNP [dm3] 2R_14455818_SNP [dm6]	A	G	5.491e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	10343486	2R_10343486_SNP [dm3] 2R_14455981_SNP [dm6]	T	A	5.491e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	4144610	X_4144610_SNP [dm3] X_4250577_SNP [dm6]	G	A	5.491e^-4	0.943	INTERGENIC
2L	20242937	2L_20242937_INS [dm3] 2L_20242937_INS [dm6]	G	GACCTTGTCGTTCTCTTCGC...	5.491e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
X	16838889	X_16838889_SNP [dm3] X_16944856_SNP [dm6]	G	A	5.530e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	9316068	3L_9316068_SNP [dm3] 3L_9322968_SNP [dm6]	T	A	5.546e^-4	0.943	INTERGENIC
2L	15761464	2L_15761464_SNP [dm3] 2L_15761464_SNP [dm6]	G	A	5.572e^-4	0.943	INTRON Gli	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2L	15764009	2L_15764009_SNP [dm3] 2L_15764009_SNP [dm6]	A	G	5.613e^-4	0.943	UPSTREAM CG3793 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	17687741	3L_17687741_DEL [dm3] 3L_17694641_DEL [dm6]	AA	A	5.616e^-4	0.943	INTRON Ccn
2R	10135360	2R_10135360_SNP [dm3] 2R_14247855_SNP [dm6]	C	T	5.666e^-4	0.943	INTRON Mdr50
2R	12833710	2R_12833710_SNP [dm3] 2R_16946205_SNP [dm6]	G	A	5.724e^-4	0.943	DOWNSTREAM CG34190 INTRON CG15614
3R	9549091	3R_9549091_SNP [dm3] 3R_13723369_SNP [dm6]	T	A	5.724e^-4	0.943	INTRON CG34383
2R	10344098	2R_10344098_SNP [dm3] 2R_14456593_SNP [dm6]	A	C	5.739e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344115	2R_10344115_SNP [dm3] 2R_14456610_SNP [dm6]	C	G	5.739e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344121	2R_10344121_SNP [dm3] 2R_14456616_SNP [dm6]	T	C	5.739e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344131	2R_10344131_SNP [dm3] 2R_14456626_SNP [dm6]	A	G	5.739e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10344148	2R_10344148_SNP [dm3] 2R_14456643_SNP [dm6]	C	T	5.739e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10441978	2R_10441978_SNP [dm3] 2R_14554473_SNP [dm6]	T	A	5.739e^-4	0.943	UPSTREAM CG43919 INTRON ttv
3L	11336408	3L_11336408_INS [dm3] 3L_11343308_INS [dm6]	A	AA	5.739e^-4	0.943	DOWNSTREAM CR45250 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA
3L	11336413	3L_11336413_SNP [dm3] 3L_11343313_SNP [dm6]	T	C	5.739e^-4	0.943	DOWNSTREAM CR45250 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA
3L	11336659	3L_11336659_SNP [dm3] 3L_11343559_SNP [dm6]	A	T	5.739e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_eve mE1_TFBS_HSA
3L	11428364	3L_11428364_SNP [dm3] 3L_11435264_SNP [dm6]	G	A	5.739e^-4	0.943	SYNONYMOUS_CODING CG6149 UPSTREAM CR44548	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	11848655	3L_11848655_SNP [dm3] 3L_11855555_SNP [dm6]	C	T	5.739e^-4	0.943	INTRON CG44837
3L	1236980	3L_1236980_SNP [dm3] 3L_1236980_SNP [dm6]	G	A	5.739e^-4	0.943	SYNONYMOUS_CODING CG9194 DOWNSTREAM CG9192
3L	1239846	3L_1239846_SNP [dm3] 3L_1239846_SNP [dm6]	T	C	5.739e^-4	0.943	SYNONYMOUS_CODING CG9194	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	13592315	3L_13592315_SNP [dm3] 3L_13599215_SNP [dm6]	A	T	5.739e^-4	0.943	UPSTREAM CR45120 INTRON bru-3
3L	13992619	3L_13992619_INS [dm3] 3L_13999519_INS [dm6]	T	TTGT	5.739e^-4	0.943	UTR_3_PRIME CG8783 UPSTREAM CG17359
3L	16968789	3L_16968789_SNP [dm3] 3L_16975689_SNP [dm6]	A	G	5.739e^-4	0.943	UPSTREAM Exn INTRON Exn
3L	17974337	3L_17974337_SNP [dm3] 3L_17981237_SNP [dm6]	A	G	5.739e^-4	0.943	INTRON Eip75B
3L	17987301	3L_17987301_SNP [dm3] 3L_17994201_SNP [dm6]	G	A	5.739e^-4	0.943	INTRON Eip75B	TF binding site mE1_TFBS_Trl
3L	18150120	3L_18150120_SNP [dm3] 3L_18157020_SNP [dm6]	A	T	5.739e^-4	0.943	SYNONYMOUS_CODING CG13699
3L	1885720	3L_1885720_SNP [dm3] 3L_1885720_SNP [dm6]	G	A	5.739e^-4	0.943	UTR_5_PRIME Tmhs UPSTREAM Aprt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	8824722	3L_8824722_SNP [dm3] 3L_8831622_SNP [dm6]	A	G	5.739e^-4	0.943	INTRON dally
3L	9793055	3L_9793055_SNP [dm3] 3L_9799955_SNP [dm6]	A	C	5.739e^-4	0.943	INTRON CG32052 & 1 other
3R	2964318	3R_2964318_SNP [dm3] 3R_7138596_SNP [dm6]	G	A	5.739e^-4	0.943	INTRON Fer1	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3R	2964319	3R_2964319_DEL [dm3] 3R_7138597_DEL [dm6]	GG	G	5.739e^-4	0.943	INTRON Fer1	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
2R	10135379	2R_10135379_SNP [dm3] 2R_14247874_SNP [dm6]	T	C	5.774e^-4	0.943	INTRON Mdr50
2R	16784111	2R_16784111_SNP [dm3] 2R_20896606_SNP [dm6]	G	A	5.774e^-4	0.943	SYNONYMOUS_CODING otp START_GAINED otp UTR_5_PRIME otp UPSTREAM CR43160	TF binding site BDTNP1_TFBS_dl
3R	21564492	3R_21564492_SNP [dm3] 3R_25738770_SNP [dm6]	T	A	5.812e^-4	0.943	INTRON LpR2	TF binding site mE1_TFBS_Trl
3R	21564608	3R_21564608_INS [dm3] 3R_25738886_INS [dm6]	T	TCAT	5.812e^-4	0.943	INTRON LpR2	TF binding site mE1_TFBS_Trl
3R	10500733	3R_10500733_SNP [dm3] 3R_14675011_SNP [dm6]	A	G	5.826e^-4	0.943	INTRON Meltrin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10500739	3R_10500739_DEL [dm3] 3R_14675017_DEL [dm6]	TCTT	T	5.826e^-4	0.943	INTRON Meltrin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10500746	3R_10500746_SNP [dm3] 3R_14675024_SNP [dm6]	T	G	5.826e^-4	0.943	INTRON Meltrin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10500751	3R_10500751_SNP [dm3] 3R_14675029_SNP [dm6]	A	G	5.826e^-4	0.943	INTRON Meltrin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	2601436	X_2601436_SNP [dm3] X_2707403_SNP [dm6]	A	G	5.884e^-4	0.943	UTR_5_PRIME CG2680	TF binding site mE1_TFBS_cad
2L	10540924	2L_10540924_DEL [dm3] 2L_10540924_DEL [dm6]	CATCTCTGCCACCCAAAAGT...	A	5.911e^-4	0.943	INTERGENIC
2L	15764030	2L_15764030_SNP [dm3] 2L_15764030_SNP [dm6]	A	G	5.929e^-4	0.943	UPSTREAM CG3793 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2L	4852125	2L_4852125_SNP [dm3] 2L_4852125_SNP [dm6]	G	C	5.975e^-4	0.943	SYNONYMOUS_CODING Mon1 UPSTREAM pog	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3L	5975209	3L_5975209_SNP [dm3] 3L_5982109_SNP [dm6]	C	T	5.982e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	15361821	X_15361821_SNP [dm3] X_15467788_SNP [dm6]	C	G	6.004e^-4	0.943	UPSTREAM CG15641 & 1 other DOWNSTREAM CG6299 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	18242727	X_18242727_SNP [dm3] X_18348694_SNP [dm6]	T	A	6.004e^-4	0.943	INTRON CG6123
2R	958344	2R_958344_SNP [dm3] 2R_5070839_SNP [dm6]	T	A	6.007e^-4	0.943	UPSTREAM TpnC41C INTERGENIC
3L	3948429	3L_3948429_SNP [dm3] 3L_3948429_SNP [dm6]	G	A	6.025e^-4	0.943	DOWNSTREAM CG14983 INTRON CG10853
3L	9846077	3L_9846077_SNP [dm3] 3L_9852977_SNP [dm6]	A	C	6.075e^-4	0.943	INTRON RasGAP1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3L	9846089	3L_9846089_SNP [dm3] 3L_9852989_SNP [dm6]	A	C	6.075e^-4	0.943	INTRON RasGAP1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3L	9846092	3L_9846092_SNP [dm3] 3L_9852992_SNP [dm6]	C	T	6.075e^-4	0.943	INTRON RasGAP1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3L	7952317	3L_7952317_SNP [dm3] 3L_7959217_SNP [dm6]	C	A	6.082e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	7418455	3L_7418455_SNP [dm3] 3L_7425355_SNP [dm6]	A	T	6.084e^-4	0.943	INTRON CG42458
X	10817871	X_10817871_SNP [dm3] X_10923838_SNP [dm6]	A	C	6.103e^-4	0.943	UPSTREAM v DOWNSTREAM CG43901 INTERGENIC
2R	9188588	2R_9188588_SNP [dm3] 2R_13301083_SNP [dm6]	A	T	6.149e^-4	0.943	INTRON CG17047
3L	1111333	3L_1111333_SNP [dm3] 3L_1111333_SNP [dm6]	T	C	6.203e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	9184140	2R_9184140_INS [dm3] 2R_13296635_INS [dm6]	G	GG	6.211e^-4	0.943	UPSTREAM Dh31-R DOWNSTREAM CG4734 INTERGENIC
3R	19564653	3R_19564653_SNP [dm3] 3R_23738931_SNP [dm6]	T	A	6.216e^-4	0.943	INTRON Hmgcr
3R	19564656	3R_19564656_SNP [dm3] 3R_23738934_SNP [dm6]	G	A	6.216e^-4	0.943	INTRON Hmgcr
2R	7110130	2R_7110130_SNP [dm3] 2R_11222625_SNP [dm6]	T	G	6.221e^-4	0.943	UPSTREAM CG7737 DOWNSTREAM Syx6 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10285199	3L_10285199_SNP [dm3] 3L_10292099_SNP [dm6]	A	C	6.236e^-4	0.943	INTERGENIC
3L	4982809	3L_4982809_SNP [dm3] 3L_4982809_SNP [dm6]	G	A	6.236e^-4	0.943	INTRON Con
3L	8147928	3L_8147928_SNP [dm3] 3L_8154828_SNP [dm6]	T	C	6.236e^-4	0.943	UTR_3_PRIME CG42445	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	9370198	3R_9370198_SNP [dm3] 3R_13544476_SNP [dm6]	T	A	6.236e^-4	0.943	INTRON CG31337
X	20006063	X_20006063_SNP [dm3] X_20112030_SNP [dm6]	G	A	6.236e^-4	0.943	INTERGENIC
X	21861956	X_21861956_SNP [dm3] X_22460120_SNP [dm6]	G	T	6.236e^-4	0.943	INTRON CG14619	transposable element FlyBase
2L	6622038	2L_6622038_SNP [dm3] 2L_6622038_SNP [dm6]	G	A	6.265e^-4	0.943	UPSTREAM CG11320 INTERGENIC	TF binding site mE1_TFBS_bab1
3L	7418012	3L_7418012_SNP [dm3] 3L_7424912_SNP [dm6]	T	C	6.270e^-4	0.943	INTRON CG42458
3L	7418432	3L_7418432_SNP [dm3] 3L_7425332_SNP [dm6]	G	C	6.270e^-4	0.943	INTRON CG42458
2L	6249737	2L_6249737_SNP [dm3] 2L_6249737_SNP [dm6]	T	C	6.298e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	11659706	3L_11659706_SNP [dm3] 3L_11666606_SNP [dm6]	G	A	6.320e^-4	0.943	INTRON CG32085
3L	17554130	3L_17554130_SNP [dm3] 3L_17561030_SNP [dm6]	G	A	6.320e^-4	0.943	UTR_3_PRIME Eip74EF
3L	17554184	3L_17554184_SNP [dm3] 3L_17561084_SNP [dm6]	C	T	6.320e^-4	0.943	UTR_3_PRIME Eip74EF
X	21917446	X_21917446_SNP [dm3] X_22515610_SNP [dm6]	A	G	6.320e^-4	0.943	UPSTREAM CR43962 INTRON CG17600	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	11535571	2R_11535571_SNP [dm3] 2R_15648066_SNP [dm6]	T	C	6.445e^-4	0.943	INTRON CG42524
2R	20162608	2R_20162608_INS [dm3] 2R_24275085_INS [dm6]	A	AA	6.445e^-4	0.943	UPSTREAM nvy INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	9188501	2R_9188501_SNP [dm3] 2R_13300996_SNP [dm6]	A	T	6.477e^-4	0.943	INTRON CG17047
2R	9188502	2R_9188502_SNP [dm3] 2R_13300997_SNP [dm6]	G	A	6.477e^-4	0.943	INTRON CG17047
2R	9188504	2R_9188504_SNP [dm3] 2R_13300999_SNP [dm6]	T	G	6.477e^-4	0.943	INTRON CG17047
2R	9188506	2R_9188506_SNP [dm3] 2R_13301001_SNP [dm6]	T	G	6.477e^-4	0.943	INTRON CG17047
2R	9188508	2R_9188508_SNP [dm3] 2R_13301003_SNP [dm6]	G	T	6.477e^-4	0.943	INTRON CG17047
2R	9188510	2R_9188510_INS [dm3] 2R_13301005_INS [dm6]	CC	AAT	6.477e^-4	0.943	INTRON CG17047
2R	9188513	2R_9188513_SNP [dm3] 2R_13301008_SNP [dm6]	C	T	6.477e^-4	0.943	INTRON CG17047
2R	9188521	2R_9188521_INS [dm3] 2R_13301016_INS [dm6]	T	TAT	6.477e^-4	0.943	INTRON CG17047
2R	9188526	2R_9188526_SNP [dm3] 2R_13301021_SNP [dm6]	T	A	6.477e^-4	0.943	INTRON CG17047
2R	9188527	2R_9188527_INS [dm3] 2R_13301022_INS [dm6]	A	AT	6.477e^-4	0.943	INTRON CG17047
2R	9181049	2R_9181049_SNP [dm3] 2R_13293544_SNP [dm6]	T	A	6.484e^-4	0.943	INTRON Dh31-R
X	16128675	X_16128675_SNP [dm3] X_16234642_SNP [dm6]	A	G	6.491e^-4	0.943	INTERGENIC
X	22051372	X_22051372_SNP [dm3] X_22649536_SNP [dm6]	G	T	6.491e^-4	0.943	INTERGENIC
2L	4390113	2L_4390113_SNP [dm3] 2L_4390113_SNP [dm6]	G	C	6.509e^-4	0.943	INTRON Tps1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	10441764	2R_10441764_SNP [dm3] 2R_14554259_SNP [dm6]	C	T	6.509e^-4	0.943	SYNONYMOUS_CODING CG43919 INTRON ttv
2R	10441766	2R_10441766_SNP [dm3] 2R_14554261_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING CG43919 INTRON ttv
2R	10441767	2R_10441767_SNP [dm3] 2R_14554262_SNP [dm6]	A	T	6.509e^-4	0.943	SYNONYMOUS_CODING CG43919 INTRON ttv
2R	10441821	2R_10441821_SNP [dm3] 2R_14554316_SNP [dm6]	G	C	6.509e^-4	0.943	UPSTREAM CG43919 INTRON ttv
2R	13019220	2R_13019220_SNP [dm3] 2R_17131715_SNP [dm6]	C	T	6.509e^-4	0.943	UPSTREAM CR45273 INTERGENIC
2R	14738135	2R_14738135_SNP [dm3] 2R_18850630_SNP [dm6]	A	G	6.509e^-4	0.943	UPSTREAM CG15084 & 1 other INTERGENIC	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Stat92E
2R	15251873	2R_15251873_SNP [dm3] 2R_19364368_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING CG10051	TF binding site mE1_TFBS_cad
2R	16657210	2R_16657210_SNP [dm3] 2R_20769705_SNP [dm6]	A	G	6.509e^-4	0.943	INTERGENIC
2R	17436493	2R_17436493_SNP [dm3] 2R_21548988_SNP [dm6]	A	T	6.509e^-4	0.943	INTRON Egfr	TF binding site BDTNP1_TFBS_dl
2R	17437081	2R_17437081_INS [dm3] 2R_21549576_INS [dm6]	G	GC	6.509e^-4	0.943	INTRON Egfr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	17437306	2R_17437306_SNP [dm3] 2R_21549801_SNP [dm6]	A	C	6.509e^-4	0.943	INTRON Egfr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
2R	20017109	2R_20017109_SNP [dm3] 2R_24129586_SNP [dm6]	G	A	6.509e^-4	0.943	SYNONYMOUS_CODING tamo	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	20017135	2R_20017135_SNP [dm3] 2R_24129612_SNP [dm6]	G	T	6.509e^-4	0.943	NON_SYNONYMOUS_CODING tamo	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	20017226	2R_20017226_SNP [dm3] 2R_24129703_SNP [dm6]	T	C	6.509e^-4	0.943	SYNONYMOUS_CODING tamo	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	20636515	2R_20636515_SNP [dm3] 2R_24748992_SNP [dm6]	T	C	6.509e^-4	0.943	INTRON CG30421
2R	424730	2R_424730_SNP [dm3] 2R_4537225_SNP [dm6]	C	A	6.509e^-4	0.943	INTERGENIC	transposable element FlyBase
2R	424731	2R_424731_SNP [dm3] 2R_4537226_SNP [dm6]	C	T	6.509e^-4	0.943	INTERGENIC	transposable element FlyBase
2R	430279	2R_430279_SNP [dm3] 2R_4542774_SNP [dm6]	G	T	6.509e^-4	0.943	INTERGENIC	transposable element FlyBase
2R	439466	2R_439466_SNP [dm3] 2R_4551961_SNP [dm6]	G	T	6.509e^-4	0.943	INTRON Stlk
2R	446362	2R_446362_SNP [dm3] 2R_4558857_SNP [dm6]	C	A	6.509e^-4	0.943	INTRON Stlk	transposable element FlyBase
2R	483618	2R_483618_SNP [dm3] 2R_4596113_SNP [dm6]	T	G	6.509e^-4	0.943	INTRON p120ctn
2R	5632539	2R_5632539_SNP [dm3] 2R_9745034_SNP [dm6]	A	T	6.509e^-4	0.943	UTR_5_PRIME sqa
2R	6879340	2R_6879340_SNP [dm3] 2R_10991835_SNP [dm6]	T	C	6.509e^-4	0.943	INTRON luna	TF binding site mE1_TFBS_chinmo
2R	7758570	2R_7758570_SNP [dm3] 2R_11871065_SNP [dm6]	T	C	6.509e^-4	0.943	SYNONYMOUS_CODING CG13185
2R	7768044	2R_7768044_SNP [dm3] 2R_11880539_SNP [dm6]	C	A	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG13185
2R	8444745	2R_8444745_SNP [dm3] 2R_12557240_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING fra	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	8854863	2R_8854863_SNP [dm3] 2R_12967358_SNP [dm6]	G	A	6.509e^-4	0.943	SYNONYMOUS_CODING Psc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	8854973	2R_8854973_SNP [dm3] 2R_12967468_SNP [dm6]	T	C	6.509e^-4	0.943	NON_SYNONYMOUS_CODING Psc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	8855409	2R_8855409_SNP [dm3] 2R_12967904_SNP [dm6]	C	T	6.509e^-4	0.943	SYNONYMOUS_CODING Psc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	11333511	3L_11333511_SNP [dm3] 3L_11340411_SNP [dm6]	C	G	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	11818048	3L_11818048_SNP [dm3] 3L_11824948_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING CG32095 DOWNSTREAM RpL10Ab	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	11925572	3L_11925572_SNP [dm3] 3L_11932472_SNP [dm6]	T	G	6.509e^-4	0.943	INTRON CG44837 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	12391396	3L_12391396_SNP [dm3] 3L_12398296_SNP [dm6]	C	T	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32104
3L	12391480	3L_12391480_SNP [dm3] 3L_12398380_SNP [dm6]	C	T	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32104
3L	12899358	3L_12899358_SNP [dm3] 3L_12906258_SNP [dm6]	T	C	6.509e^-4	0.943	INTERGENIC
3L	1480731	3L_1480731_SNP [dm3] 3L_1480731_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON stet	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3L	17966051	3L_17966051_SNP [dm3] 3L_17972951_SNP [dm6]	C	T	6.509e^-4	0.943	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3L	17966155	3L_17966155_SNP [dm3] 3L_17973055_SNP [dm6]	T	A	6.509e^-4	0.943	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	17968708	3L_17968708_SNP [dm3] 3L_17975608_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON Eip75B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	17980702	3L_17980702_SNP [dm3] 3L_17987602_SNP [dm6]	A	C	6.509e^-4	0.943	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl
3L	19119103	3L_19119103_SNP [dm3] 3L_19126003_SNP [dm6]	T	G	6.509e^-4	0.943	INTRON CG14082
3L	19119134	3L_19119134_SNP [dm3] 3L_19126034_SNP [dm6]	C	T	6.509e^-4	0.943	INTRON CG14082
3L	19119215	3L_19119215_SNP [dm3] 3L_19126115_SNP [dm6]	G	C	6.509e^-4	0.943	INTRON CG14082
3L	3440927	3L_3440927_SNP [dm3] 3L_3440927_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON eIF5B	TF binding site mE1_TFBS_HSA
3L	3965104	3L_3965104_SNP [dm3] 3L_3965104_SNP [dm6]	T	A	6.509e^-4	0.943	UPSTREAM CG12605 INTERGENIC	TF binding site mE1_TFBS_Trl
3L	3965106	3L_3965106_SNP [dm3] 3L_3965106_SNP [dm6]	A	C	6.509e^-4	0.943	UPSTREAM CG12605 INTERGENIC	TF binding site mE1_TFBS_Trl
3L	3965107	3L_3965107_SNP [dm3] 3L_3965107_SNP [dm6]	C	A	6.509e^-4	0.943	UPSTREAM CG12605 INTERGENIC	TF binding site mE1_TFBS_Trl
3L	3965252	3L_3965252_SNP [dm3] 3L_3965252_SNP [dm6]	G	T	6.509e^-4	0.943	UPSTREAM CG12605 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	4980839	3L_4980839_INS [dm3] 3L_4980839_INS [dm6]	T	TAATGTAGTTACAAAT...	6.509e^-4	0.943	UPSTREAM CG17030 INTRON Con EXON CR45685	TF binding site mE1_TFBS_HSA
3L	4980896	3L_4980896_SNP [dm3] 3L_4980896_SNP [dm6]	C	A	6.509e^-4	0.943	UPSTREAM CG17030 INTRON Con EXON CR45685	TF binding site mE1_TFBS_HSA
3L	4981146	3L_4981146_SNP [dm3] 3L_4981146_SNP [dm6]	G	A	6.509e^-4	0.943	UPSTREAM CG17030 INTRON Con EXON CR45685	TF binding site mE1_TFBS_HSA
3L	4982805	3L_4982805_SNP [dm3] 3L_4982805_SNP [dm6]	C	T	6.509e^-4	0.943	INTRON Con
3L	4988464	3L_4988464_SNP [dm3] 3L_4988464_SNP [dm6]	A	G	6.509e^-4	0.943	INTRON Con
3L	4992582	3L_4992582_SNP [dm3] 3L_4992582_SNP [dm6]	A	T	6.509e^-4	0.943	INTRON Con
3L	4993661	3L_4993661_SNP [dm3] 3L_4993661_SNP [dm6]	T	C	6.509e^-4	0.943	DOWNSTREAM CG32232 INTRON Con	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4994222	3L_4994222_SNP [dm3] 3L_4994222_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4994838	3L_4994838_SNP [dm3] 3L_4994838_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4994844	3L_4994844_SNP [dm3] 3L_4994844_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4994985	3L_4994985_SNP [dm3] 3L_4994985_SNP [dm6]	G	C	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4994997	3L_4994997_SNP [dm3] 3L_4994997_SNP [dm6]	A	T	6.509e^-4	0.943	SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4995027	3L_4995027_SNP [dm3] 3L_4995027_SNP [dm6]	C	T	6.509e^-4	0.943	SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4995054	3L_4995054_SNP [dm3] 3L_4995054_SNP [dm6]	G	A	6.509e^-4	0.943	SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4995062	3L_4995062_SNP [dm3] 3L_4995062_SNP [dm6]	G	A	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4995068	3L_4995068_SNP [dm3] 3L_4995068_SNP [dm6]	C	T	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4995096	3L_4995096_SNP [dm3] 3L_4995096_SNP [dm6]	T	A	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4995133	3L_4995133_SNP [dm3] 3L_4995133_SNP [dm6]	C	G	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	4995775	3L_4995775_SNP [dm3] 3L_4995775_SNP [dm6]	T	A	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site mE1_TFBS_sens
3L	5466482	3L_5466482_SNP [dm3] 3L_5473382_SNP [dm6]	A	G	6.509e^-4	0.943	INTERGENIC
3L	5712797	3L_5712797_SNP [dm3] 3L_5719697_SNP [dm6]	T	C	6.509e^-4	0.943	UPSTREAM snoRNA:Me18S-A1494 INTRON sif
3L	6926839	3L_6926839_SNP [dm3] 3L_6933739_SNP [dm6]	G	C	6.509e^-4	0.943	INTRON CG14820
3L	7547382	3L_7547382_SNP [dm3] 3L_7554282_SNP [dm6]	C	A	6.509e^-4	0.943	INTERGENIC
3L	7948400	3L_7948400_SNP [dm3] 3L_7955300_SNP [dm6]	G	T	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	7952157	3L_7952157_SNP [dm3] 3L_7959057_SNP [dm6]	T	A	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	7952179	3L_7952179_SNP [dm3] 3L_7959079_SNP [dm6]	G	A	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8038191	3L_8038191_SNP [dm3] 3L_8045091_SNP [dm6]	C	A	6.509e^-4	0.943	INTRON nmo
3L	8206529	3L_8206529_SNP [dm3] 3L_8213429_SNP [dm6]	C	G	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG8006	TF binding site mE1_TFBS_cad
3L	8905311	3L_8905311_SNP [dm3] 3L_8912211_SNP [dm6]	C	T	6.509e^-4	0.943	SPLICE_SITE_REGION mfr UPSTREAM Tsp66E & 1 other INTRON mfr	TF binding site BDTNP1_TFBS_dl
3L	8905315	3L_8905315_SNP [dm3] 3L_8912215_SNP [dm6]	G	A	6.509e^-4	0.943	UPSTREAM Tsp66E & 1 other INTRON mfr	TF binding site BDTNP1_TFBS_dl
3L	9794812	3L_9794812_SNP [dm3] 3L_9801712_SNP [dm6]	G	A	6.509e^-4	0.943	NON_SYNONYMOUS_CODING Ilp3 INTRON CG32052	TF binding site mE1_TFBS_cad
3L	9794978	3L_9794978_SNP [dm3] 3L_9801878_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING Ilp3 INTRON CG32052	TF binding site mE1_TFBS_cad
3L	9795185	3L_9795185_SNP [dm3] 3L_9802085_SNP [dm6]	A	G	6.509e^-4	0.943	UTR_5_PRIME Ilp3 INTRON CG32052	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	9795995	3L_9795995_SNP [dm3] 3L_9802895_SNP [dm6]	C	G	6.509e^-4	0.943	UPSTREAM Ilp3 DOWNSTREAM Ilp4 INTRON CG32052	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10670301	3R_10670301_MNP [dm3] 3R_14844579_MNP [dm6]	TAG	AGA	6.509e^-4	0.943	UPSTREAM CG3610 INTRON btsz
3R	12608943	3R_12608943_SNP [dm3] 3R_16783221_SNP [dm6]	G	A	6.509e^-4	0.943	UPSTREAM CR44945 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	12608973	3R_12608973_SNP [dm3] 3R_16783251_SNP [dm6]	A	T	6.509e^-4	0.943	UPSTREAM CR44945 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	12608974	3R_12608974_SNP [dm3] 3R_16783252_SNP [dm6]	T	A	6.509e^-4	0.943	UPSTREAM CR44945 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	12608984	3R_12608984_SNP [dm3] 3R_16783262_SNP [dm6]	C	A	6.509e^-4	0.943	UPSTREAM CR44945 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	14614133	3R_14614133_SNP [dm3] 3R_18788411_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON CG7720
3R	14615289	3R_14615289_SNP [dm3] 3R_18789567_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON CG7720	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	14615291	3R_14615291_SNP [dm3] 3R_18789569_SNP [dm6]	A	C	6.509e^-4	0.943	INTRON CG7720	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	14615423	3R_14615423_SNP [dm3] 3R_18789701_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON CG7720	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	15276593	3R_15276593_SNP [dm3] 3R_19450871_SNP [dm6]	C	T	6.509e^-4	0.943	INTRON CG31221
3R	16904292	3R_16904292_SNP [dm3] 3R_21078570_SNP [dm6]	C	T	6.509e^-4	0.943	INTRON HHEX
3R	20909245	3R_20909245_SNP [dm3] 3R_25083523_SNP [dm6]	A	G	6.509e^-4	0.943	UTR_5_PRIME fd96Ca	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	21149997	3R_21149997_SNP [dm3] 3R_25324275_SNP [dm6]	A	C	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CHKov1
3R	22430362	3R_22430362_SNP [dm3] 3R_26604640_SNP [dm6]	T	A	6.509e^-4	0.943	DOWNSTREAM scrib INTERGENIC
3R	22760392	3R_22760392_SNP [dm3] 3R_26934670_SNP [dm6]	C	T	6.509e^-4	0.943	INTRON sda
X	11123830	X_11123830_SNP [dm3] X_11229797_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON CG44422
X	13182494	X_13182494_SNP [dm3] X_13288461_SNP [dm6]	G	T	6.509e^-4	0.943	SYNONYMOUS_CODING CG15744 DOWNSTREAM CG15743	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
X	13182500	X_13182500_SNP [dm3] X_13288467_SNP [dm6]	T	C	6.509e^-4	0.943	SYNONYMOUS_CODING CG15744 DOWNSTREAM CG15743	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
X	13182505	X_13182505_SNP [dm3] X_13288472_SNP [dm6]	C	T	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG15744 DOWNSTREAM CG15743	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
X	13182511	X_13182511_SNP [dm3] X_13288478_SNP [dm6]	A	C	6.509e^-4	0.943	NON_SYNONYMOUS_CODING CG15744 DOWNSTREAM CG15743	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
X	13182512	X_13182512_SNP [dm3] X_13288479_SNP [dm6]	A	G	6.509e^-4	0.943	SYNONYMOUS_CODING CG15744 DOWNSTREAM CG15743	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
X	13595257	X_13595257_SNP [dm3] X_13701224_SNP [dm6]	G	C	6.509e^-4	0.943	UTR_5_PRIME CG9940 INTRON NnaD
X	16680886	X_16680886_SNP [dm3] X_16786853_SNP [dm6]	T	C	6.509e^-4	0.943	UTR_5_PRIME CG9609 UPSTREAM Sap30	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
X	16840526	X_16840526_SNP [dm3] X_16946493_SNP [dm6]	G	A	6.509e^-4	0.943	INTRON RhoGAP15B	TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1
X	20005872	X_20005872_SNP [dm3] X_20111839_SNP [dm6]	C	A	6.509e^-4	0.943	INTERGENIC
X	20005882	X_20005882_SNP [dm3] X_20111849_SNP [dm6]	T	A	6.509e^-4	0.943	INTERGENIC
X	20005976	X_20005976_SNP [dm3] X_20111943_SNP [dm6]	G	A	6.509e^-4	0.943	INTERGENIC
X	20006135	X_20006135_SNP [dm3] X_20112102_SNP [dm6]	C	T	6.509e^-4	0.943	INTERGENIC
X	20006170	X_20006170_SNP [dm3] X_20112137_SNP [dm6]	C	G	6.509e^-4	0.943	INTERGENIC	transposable element FlyBase
X	21861864	X_21861864_SNP [dm3] X_22460028_SNP [dm6]	A	C	6.509e^-4	0.943	INTRON CG14619	transposable element FlyBase
X	3222802	X_3222802_SNP [dm3] X_3328769_SNP [dm6]	T	G	6.509e^-4	0.943	UPSTREAM dnc INTRON CR44886 & 1 other
X	3701452	X_3701452_SNP [dm3] X_3807419_SNP [dm6]	A	C	6.509e^-4	0.943	INTRON fd3F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	7498313	X_7498313_SNP [dm3] X_7604280_SNP [dm6]	T	A	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	7498891	X_7498891_SNP [dm3] X_7604858_SNP [dm6]	T	C	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	7499980	X_7499980_SNP [dm3] X_7605947_SNP [dm6]	C	G	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z
X	7500226	X_7500226_INS [dm3] X_7606193_INS [dm6]	A	AT	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_Trl
X	7500814	X_7500814_SNP [dm3] X_7606781_SNP [dm6]	T	G	6.509e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
X	9183142	X_9183142_SNP [dm3] X_9289109_SNP [dm6]	T	A	6.509e^-4	0.943	INTRON lz	TF binding site mE1_TFBS_D mE1_TFBS_HSA
X	11729451	X_11729451_SNP [dm3] X_11835418_SNP [dm6]	G	A	6.557e^-4	0.943	UTR_3_PRIME rudhira	TF binding site mE1_TFBS_cad
3L	9210086	3L_9210086_SNP [dm3] 3L_9216986_SNP [dm6]	G	C	6.567e^-4	0.943	INTERGENIC
X	9083999	X_9083999_SNP [dm3] X_9189966_SNP [dm6]	G	A	6.567e^-4	0.943	NON_SYNONYMOUS_CODING CG12115 DOWNSTREAM mei-P26
X	9084015	X_9084015_SNP [dm3] X_9189982_SNP [dm6]	G	A	6.567e^-4	0.943	SYNONYMOUS_CODING CG12115 DOWNSTREAM mei-P26
3L	10348074	3L_10348074_SNP [dm3] 3L_10354974_SNP [dm6]	G	A	6.570e^-4	0.943	INTRON CR44327	TF binding site BDTNP1_TFBS_twi
3L	11941865	3L_11941865_SNP [dm3] 3L_11948765_SNP [dm6]	A	G	6.570e^-4	0.943	SYNONYMOUS_CODING CG7252	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	13584774	3R_13584774_SNP [dm3] 3R_17759052_SNP [dm6]	G	T	6.570e^-4	0.943	UPSTREAM TyrR INTRON TyrR
2L	4933594	2L_4933594_SNP [dm3] 2L_4933594_SNP [dm6]	T	G	6.579e^-4	0.943	SYNONYMOUS_CODING hoe2
3L	16191983	3L_16191983_SNP [dm3] 3L_16198883_SNP [dm6]	A	G	6.591e^-4	0.943	UPSTREAM CG33688 DOWNSTREAM CG33687 INTERGENIC
3R	18371371	3R_18371371_SNP [dm3] 3R_22545649_SNP [dm6]	A	G	6.613e^-4	0.943	INTRON AdipoR
3L	10715464	3L_10715464_SNP [dm3] 3L_10722364_SNP [dm6]	C	T	6.616e^-4	0.943	INTERGENIC
2R	5273808	2R_5273808_SNP [dm3] 2R_9386303_SNP [dm6]	C	T	6.617e^-4	0.943	INTRON CG13954
2R	5273830	2R_5273830_SNP [dm3] 2R_9386325_SNP [dm6]	C	T	6.617e^-4	0.943	INTRON CG13954
2R	5273904	2R_5273904_SNP [dm3] 2R_9386399_SNP [dm6]	G	A	6.617e^-4	0.943	INTRON CG13954
X	14024435	X_14024435_SNP [dm3] X_14130402_SNP [dm6]	G	C	6.617e^-4	0.943	INTERGENIC
3R	26943983	3R_26943983_SNP [dm3] 3R_31118261_SNP [dm6]	G	A	6.629e^-4	0.943	INTERGENIC
3R	26944050	3R_26944050_SNP [dm3] 3R_31118328_SNP [dm6]	G	A	6.629e^-4	0.943	INTERGENIC
3R	2857730	3R_2857730_SNP [dm3] 3R_7032008_SNP [dm6]	T	A	6.649e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2R	14693059	2R_14693059_SNP [dm3] 2R_18805554_SNP [dm6]	C	T	6.679e^-4	0.943	UPSTREAM CR44468 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	19038990	2R_19038990_SNP [dm3] 2R_23151467_SNP [dm6]	C	T	6.679e^-4	0.943	INTERGENIC
3L	5899661	3L_5899661_SNP [dm3] 3L_5906561_SNP [dm6]	T	C	6.713e^-4	0.943	UPSTREAM CG13288 INTRON CG10486	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	14276199	3R_14276199_SNP [dm3] 3R_18450477_SNP [dm6]	T	A	6.716e^-4	0.943	UPSTREAM fru INTRON fru	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	14276538	3R_14276538_SNP [dm3] 3R_18450816_SNP [dm6]	C	T	6.716e^-4	0.943	UPSTREAM fru INTRON fru	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	21927348	X_21927348_SNP [dm3] X_22525512_SNP [dm6]	G	T	6.763e^-4	0.943	INTRON CG17600
X	21927354	X_21927354_SNP [dm3] X_22525518_SNP [dm6]	A	T	6.763e^-4	0.943	INTRON CG17600
2L	10452785	2L_10452785_SNP [dm3] 2L_10452785_SNP [dm6]	G	T	6.771e^-4	0.943	SYNONYMOUS_CODING CG5322 UPSTREAM ppk10
3R	6542694	3R_6542694_SNP [dm3] 3R_10716972_SNP [dm6]	G	A	6.778e^-4	0.943	INTERGENIC
3L	9547680	3L_9547680_DEL [dm3] 3L_9554580_DEL [dm6]	TT	T	6.780e^-4	0.943	INTRON CG42673
2R	16323981	2R_16323981_SNP [dm3] 2R_20436476_SNP [dm6]	A	G	6.818e^-4	0.943	INTRON CG12484
3L	3623781	3L_3623781_SNP [dm3] 3L_3623781_SNP [dm6]	A	G	6.819e^-4	0.943	INTERGENIC
3L	3623992	3L_3623992_SNP [dm3] 3L_3623992_SNP [dm6]	G	A	6.819e^-4	0.943	INTERGENIC
3L	3624043	3L_3624043_SNP [dm3] 3L_3624043_SNP [dm6]	A	G	6.819e^-4	0.943	INTERGENIC
3R	8040114	3R_8040114_DEL [dm3] 3R_12214392_DEL [dm6]	GGTCGCCGCAAGAGAAACAC...	G	6.819e^-4	0.943	UTR_3_PRIME CG4848 UPSTREAM CG14742
3R	11818697	3R_11818697_SNP [dm3] 3R_15992975_SNP [dm6]	G	A	6.829e^-4	0.943	INTRON srp & 1 other	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
3R	13661761	3R_13661761_SNP [dm3] 3R_17836039_SNP [dm6]	G	C	6.829e^-4	0.943	INTRON tinc
X	8827409	X_8827409_SNP [dm3] X_8933376_SNP [dm6]	T	C	6.857e^-4	0.943	INTRON rdgA
2L	11029159	2L_11029159_SNP [dm3] 2L_11029159_SNP [dm6]	T	C	6.876e^-4	0.943	NON_SYNONYMOUS_CODING Samuel UTR_3_PRIME Samuel	TF binding site mE1_TFBS_cad
2L	11438495	2L_11438495_SNP [dm3] 2L_11438495_SNP [dm6]	C	T	6.889e^-4	0.943	SYNONYMOUS_CODING salm	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
3R	9740636	3R_9740636_SNP [dm3] 3R_13914914_SNP [dm6]	C	T	6.909e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	9740665	3R_9740665_SNP [dm3] 3R_13914943_SNP [dm6]	G	C	6.909e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	9740675	3R_9740675_SNP [dm3] 3R_13914953_SNP [dm6]	C	T	6.909e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	9740676	3R_9740676_SNP [dm3] 3R_13914954_SNP [dm6]	A	T	6.909e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	14996917	3R_14996917_SNP [dm3] 3R_19171195_SNP [dm6]	A	G	6.915e^-4	0.943	DOWNSTREAM sqz INTERGENIC
X	14601694	X_14601694_SNP [dm3] X_14707661_SNP [dm6]	A	T	6.915e^-4	0.943	INTRON NetB
X	14601710	X_14601710_DEL [dm3] X_14707677_DEL [dm6]	AG	A	6.915e^-4	0.943	INTRON NetB
2R	10029195	2R_10029195_SNP [dm3] 2R_14141690_SNP [dm6]	A	G	6.920e^-4	0.943	UPSTREAM Prosap INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	15768546	2R_15768546_SNP [dm3] 2R_19881041_SNP [dm6]	A	C	6.926e^-4	0.943	UPSTREAM CG13872 INTERGENIC	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad
X	21927291	X_21927291_SNP [dm3] X_22525455_SNP [dm6]	G	A	6.926e^-4	0.943	INTRON CG17600
X	21927301	X_21927301_SNP [dm3] X_22525465_SNP [dm6]	A	G	6.926e^-4	0.943	INTRON CG17600
X	21927333	X_21927333_SNP [dm3] X_22525497_SNP [dm6]	A	G	6.926e^-4	0.943	INTRON CG17600
X	21927424	X_21927424_SNP [dm3] X_22525588_SNP [dm6]	A	C	6.926e^-4	0.943	INTRON CG17600
X	21927583	X_21927583_SNP [dm3] X_22525747_SNP [dm6]	T	G	6.926e^-4	0.943	INTRON CG17600
X	21927585	X_21927585_SNP [dm3] X_22525749_SNP [dm6]	A	G	6.926e^-4	0.943	INTRON CG17600
X	21927733	X_21927733_SNP [dm3] X_22525897_SNP [dm6]	G	T	6.926e^-4	0.943	INTRON CG17600
X	21927744	X_21927744_SNP [dm3] X_22525908_SNP [dm6]	T	A	6.926e^-4	0.943	INTRON CG17600
3L	12641438	3L_12641438_SNP [dm3] 3L_12648338_SNP [dm6]	A	G	6.946e^-4	0.943	DOWNSTREAM CR43431 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd
2R	16657187	2R_16657187_SNP [dm3] 2R_20769682_SNP [dm6]	G	T	6.956e^-4	0.943	INTERGENIC
2R	9181101	2R_9181101_SNP [dm3] 2R_13293596_SNP [dm6]	G	T	6.998e^-4	0.943	INTRON Dh31-R
2L	705940	2L_705940_SNP [dm3] 2L_705940_SNP [dm6]	C	G	7.096e^-4	0.943	SYNONYMOUS_CODING ds	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	19924766	2L_19924766_SNP [dm3] 2L_19924766_SNP [dm6]	G	T	7.114e^-4	0.943	INTRON sick
2R	7664506	2R_7664506_SNP [dm3] 2R_11777001_SNP [dm6]	T	G	7.130e^-4	0.943	INTRON ths
2R	7664507	2R_7664507_SNP [dm3] 2R_11777002_SNP [dm6]	A	T	7.130e^-4	0.943	INTRON ths
3R	25948603	3R_25948603_SNP [dm3] 3R_30122881_SNP [dm6]	A	G	7.265e^-4	0.943	SYNONYMOUS_CODING CG45072 DOWNSTREAM CG45073
3L	1796075	3L_1796075_SNP [dm3] 3L_1796075_SNP [dm6]	C	A	7.349e^-4	0.943	UPSTREAM alpha-Spec & 1 other INTRON Cdc37	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
3L	16498509	3L_16498509_DEL [dm3] 3L_16505409_DEL [dm6]	TCT	T	7.376e^-4	0.943	INTRON CG43373
2L	16713551	2L_16713551_DEL [dm3] 2L_16713551_DEL [dm6]	TCACCTAACAT...	T	7.420e^-4	0.943	INTRON CG31808
2L	16713573	2L_16713573_SNP [dm3] 2L_16713573_SNP [dm6]	C	A	7.420e^-4	0.943	INTRON CG31808
X	8208587	X_8208587_SNP [dm3] X_8314554_SNP [dm6]	T	G	7.444e^-4	0.943	INTRON nAChRalpha3
3L	12611912	3L_12611912_SNP [dm3] 3L_12618812_SNP [dm6]	C	A	7.451e^-4	0.943	INTRON caup
3L	18149879	3L_18149879_SNP [dm3] 3L_18156779_SNP [dm6]	G	A	7.460e^-4	0.943	INTRON CG13699
2L	15460470	2L_15460470_SNP [dm3] 2L_15460470_SNP [dm6]	T	A	7.469e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_HSA
2L	8435382	2L_8435382_SNP [dm3] 2L_8435382_SNP [dm6]	C	T	7.469e^-4	0.943	SYNONYMOUS_CODING D12
2L	9531543	2L_9531543_SNP [dm3] 2L_9531543_SNP [dm6]	C	A	7.469e^-4	0.943	INTRON Oatp30B
3R	25969816	3R_25969816_SNP [dm3] 3R_30144094_SNP [dm6]	A	G	7.492e^-4	0.943	INTRON AdoR	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	19469676	X_19469676_SNP [dm3] X_19575643_SNP [dm6]	G	T	7.502e^-4	0.943	SYNONYMOUS_CODING Tao	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
X	16166309	X_16166309_SNP [dm3] X_16272276_SNP [dm6]	A	G	7.552e^-4	0.943	INTRON kat80 & 1 other
3L	13100602	3L_13100602_SNP [dm3] 3L_13107502_SNP [dm6]	A	T	7.602e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_sens
3R	25723468	3R_25723468_SNP [dm3] 3R_29897746_SNP [dm6]	A	T	7.624e^-4	0.943	UTR_3_PRIME CG31038 INTRON CG31038
3R	8286174	3R_8286174_SNP [dm3] 3R_12460452_SNP [dm6]	T	C	7.624e^-4	0.943	UTR_5_PRIME CG12267 UPSTREAM CG12267 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9548931	3R_9548931_SNP [dm3] 3R_13723209_SNP [dm6]	A	G	7.624e^-4	0.943	INTRON CG34383
3R	9548936	3R_9548936_SNP [dm3] 3R_13723214_SNP [dm6]	G	C	7.624e^-4	0.943	INTRON CG34383
3L	15672948	3L_15672948_SNP [dm3] 3L_15679848_SNP [dm6]	T	C	7.629e^-4	0.943	SYNONYMOUS_CODING CG7304
3L	1116584	3L_1116584_SNP [dm3] 3L_1116584_SNP [dm6]	G	A	7.666e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16838883	X_16838883_INS [dm3] X_16944850_INS [dm6]	T	TTT	7.698e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	5604666	2R_5604666_SNP [dm3] 2R_9717161_SNP [dm6]	C	T	7.720e^-4	0.943	SYNONYMOUS_CODING sqa DOWNSTREAM dap	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	19407206	3L_19407206_SNP [dm3] 3L_19414106_SNP [dm6]	G	A	7.740e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	9635849	X_9635849_SNP [dm3] X_9741816_SNP [dm6]	C	A	7.749e^-4	0.943	INTRON Sp1
2L	13841632	2L_13841632_SNP [dm3] 2L_13841632_SNP [dm6]	A	G	7.753e^-4	0.943	UPSTREAM CG33307 INTRON CenG1A	TF binding site mE1_TFBS_bab1
2R	16637634	2R_16637634_SNP [dm3] 2R_20750129_SNP [dm6]	T	A	7.780e^-4	0.943	UTR_3_PRIME dpr UPSTREAM CG34201 DOWNSTREAM dpr
3L	10999220	3L_10999220_SNP [dm3] 3L_11006120_SNP [dm6]	T	C	7.780e^-4	0.943	INTRON klu
3L	10999225	3L_10999225_SNP [dm3] 3L_11006125_SNP [dm6]	A	G	7.780e^-4	0.943	INTRON klu
X	11665638	X_11665638_SNP [dm3] X_11771605_SNP [dm6]	A	G	7.829e^-4	0.943	SYNONYMOUS_CODING dy	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9917237	2R_9917237_SNP [dm3] 2R_14029732_SNP [dm6]	A	G	7.842e^-4	0.943	DOWNSTREAM CG18371 INTRON mam
2R	9260126	2R_9260126_SNP [dm3] 2R_13372621_SNP [dm6]	G	A	7.847e^-4	0.943	INTERGENIC
3R	13662781	3R_13662781_INS [dm3] 3R_17837059_INS [dm6]	A	AGAA	7.872e^-4	0.943	INTRON tinc
3L	12785581	3L_12785581_SNP [dm3] 3L_12792481_SNP [dm6]	C	T	7.895e^-4	0.943	INTRON Atg1 & 1 other
2R	17843199	2R_17843199_SNP [dm3] 2R_21955694_SNP [dm6]	A	T	7.914e^-4	0.943	UPSTREAM CG13494 INTERGENIC
2R	7023801	2R_7023801_SNP [dm3] 2R_11136296_SNP [dm6]	T	A	7.914e^-4	0.943	SPLICE_SITE_REGION BBS4 INTRON BBS4
3L	427841	3L_427841_SNP [dm3] 3L_427841_SNP [dm6]	C	T	7.945e^-4	0.943	INTERGENIC
3L	4611224	3L_4611224_SNP [dm3] 3L_4611224_SNP [dm6]	G	A	7.945e^-4	0.943	INTRON Src64B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	872317	3L_872317_SNP [dm3] 3L_872317_SNP [dm6]	C	T	7.945e^-4	0.943	UPSTREAM CG32479 DOWNSTREAM CG12502 INTRON CG32479	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	872319	3L_872319_SNP [dm3] 3L_872319_SNP [dm6]	C	T	7.945e^-4	0.943	UPSTREAM CG32479 DOWNSTREAM CG12502 INTRON CG32479	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	3783476	2L_3783476_SNP [dm3] 2L_3783476_SNP [dm6]	T	A	7.977e^-4	0.943	UTR_3_PRIME bowl
2L	20243237	2L_20243237_SNP [dm3] 2L_20243237_SNP [dm6]	C	A	8.018e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	6621941	2L_6621941_SNP [dm3] 2L_6621941_SNP [dm6]	T	C	8.019e^-4	0.943	UPSTREAM CG11320 INTERGENIC	TF binding site mE1_TFBS_bab1
X	16801476	X_16801476_SNP [dm3] X_16907443_SNP [dm6]	T	C	8.078e^-4	0.943	INTRON CR44754
X	17361543	X_17361543_SNP [dm3] X_17467510_SNP [dm6]	A	T	8.078e^-4	0.943	INTRON CG43658
2R	10150619	2R_10150619_SNP [dm3] 2R_14263114_SNP [dm6]	A	C	8.109e^-4	0.943	SYNONYMOUS_CODING CG8547	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9297166	3L_9297166_SNP [dm3] 3L_9304066_SNP [dm6]	T	C	8.110e^-4	0.943	INTERGENIC
3R	22332252	3R_22332252_SNP [dm3] 3R_26506530_SNP [dm6]	A	T	8.130e^-4	0.943	INTRON plum
2R	8642385	2R_8642385_SNP [dm3] 2R_12754880_SNP [dm6]	G	C	8.156e^-4	0.943	UTR_5_PRIME Taz INTRON Taz	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	4328627	3L_4328627_SNP [dm3] 3L_4328627_SNP [dm6]	C	A	8.180e^-4	0.943	INTRON Cip4
2R	16881945	2R_16881945_SNP [dm3] 2R_20994440_SNP [dm6]	A	C	8.186e^-4	0.943	UPSTREAM Prosalpha3 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc
X	9456384	X_9456384_SNP [dm3] X_9562351_SNP [dm6]	C	G	8.207e^-4	0.943	NON_SYNONYMOUS_CODING Cubn	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	9548859	3R_9548859_SNP [dm3] 3R_13723137_SNP [dm6]	C	A	8.218e^-4	0.943	INTRON CG34383
3L	21778464	3L_21778464_SNP [dm3] 3L_21785364_SNP [dm6]	A	T	8.291e^-4	0.943	INTERGENIC
3R	8148475	3R_8148475_SNP [dm3] 3R_12322753_SNP [dm6]	C	T	8.291e^-4	0.943	UPSTREAM CG10013 & 1 other INTERGENIC
3R	26945348	3R_26945348_SNP [dm3] 3R_31119626_SNP [dm6]	G	T	8.326e^-4	0.943	INTERGENIC
X	14339941	X_14339941_SNP [dm3] X_14445908_SNP [dm6]	A	T	8.329e^-4	0.943	INTRON dpr8
2R	14581726	2R_14581726_SNP [dm3] 2R_18694221_SNP [dm6]	C	T	8.349e^-4	0.943	INTRON Sik3	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10320995	2R_10320995_SNP [dm3] 2R_14433490_SNP [dm6]	T	C	8.355e^-4	0.943	EXON CR45277	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	15906261	2R_15906261_SNP [dm3] 2R_20018756_SNP [dm6]	T	C	8.410e^-4	0.943	INTERGENIC
3L	7116759	3L_7116759_SNP [dm3] 3L_7123659_SNP [dm6]	C	T	8.410e^-4	0.943	DOWNSTREAM form3 INTRON msl-3
2R	8945354	2R_8945354_SNP [dm3] 2R_13057849_SNP [dm6]	T	A	8.411e^-4	0.943	UTR_3_PRIME Drl-2
3L	17502933	3L_17502933_SNP [dm3] 3L_17509833_SNP [dm6]	C	G	8.411e^-4	0.943	INTRON Oatp74D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17502997	3L_17502997_SNP [dm3] 3L_17509897_SNP [dm6]	T	A	8.411e^-4	0.943	INTRON Oatp74D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17503056	3L_17503056_SNP [dm3] 3L_17509956_SNP [dm6]	G	A	8.411e^-4	0.943	INTRON Oatp74D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17503063	3L_17503063_SNP [dm3] 3L_17509963_SNP [dm6]	T	G	8.411e^-4	0.943	INTRON Oatp74D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17503134	3L_17503134_SNP [dm3] 3L_17510034_SNP [dm6]	G	A	8.411e^-4	0.943	INTRON Oatp74D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	16492837	3R_16492837_SNP [dm3] 3R_20667115_SNP [dm6]	C	A	8.437e^-4	0.943	INTERGENIC
2R	19021770	2R_19021770_SNP [dm3] 2R_23134247_SNP [dm6]	A	C	8.437e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	9148478	3L_9148478_INS [dm3] 3L_9155378_INS [dm6]	C	CATC	8.442e^-4	0.943	INTRON Rdl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	20289859	2L_20289859_SNP [dm3] 2L_20289859_SNP [dm6]	A	G	8.490e^-4	0.943	INTERGENIC
2L	6601274	2L_6601274_SNP [dm3] 2L_6601274_SNP [dm6]	A	T	8.490e^-4	0.943	UPSTREAM CG11319 INTERGENIC
2L	5967447	2L_5967447_SNP [dm3] 2L_5967447_SNP [dm6]	C	A	8.526e^-4	0.943	NON_SYNONYMOUS_CODING CG13992	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	16844610	X_16844610_SNP [dm3] X_16950577_SNP [dm6]	G	T	8.529e^-4	0.943	INTRON RhoGAP15B
2L	8238919	2L_8238919_SNP [dm3] 2L_8238919_SNP [dm6]	T	A	8.543e^-4	0.943	SPLICE_SITE_REGION Pvr START_GAINED Pvr UTR_5_PRIME Pvr INTRON Pvr	TF binding site BDTNP1_TFBS_dl
3R	21564537	3R_21564537_SNP [dm3] 3R_25738815_SNP [dm6]	C	T	8.561e^-4	0.943	INTRON LpR2	TF binding site mE1_TFBS_Trl
3R	21564579	3R_21564579_SNP [dm3] 3R_25738857_SNP [dm6]	T	A	8.561e^-4	0.943	INTRON LpR2	TF binding site mE1_TFBS_Trl
3R	21564751	3R_21564751_SNP [dm3] 3R_25739029_SNP [dm6]	A	G	8.561e^-4	0.943	INTRON LpR2
X	14079730	X_14079730_SNP [dm3] X_14185697_SNP [dm6]	C	T	8.594e^-4	0.943	SYNONYMOUS_CODING CG32603
2L	502618	2L_502618_SNP [dm3] 2L_502618_SNP [dm6]	T	C	8.638e^-4	0.943	INTRON ush
2L	751555	2L_751555_SNP [dm3] 2L_751555_SNP [dm6]	C	A	8.638e^-4	0.943	INTRON GABA-B-R3
2L	751560	2L_751560_SNP [dm3] 2L_751560_SNP [dm6]	G	C	8.638e^-4	0.943	INTRON GABA-B-R3
3R	15157645	3R_15157645_SNP [dm3] 3R_19331923_SNP [dm6]	C	G	8.638e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	19964792	3R_19964792_SNP [dm3] 3R_24139070_SNP [dm6]	G	T	8.638e^-4	0.943	INTRON Npc2f	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	9183173	X_9183173_INS [dm3] X_9289140_INS [dm6]	A	AA	8.663e^-4	0.943	INTRON lz	TF binding site mE1_TFBS_D mE1_TFBS_HSA
3L	10996847	3L_10996847_SNP [dm3] 3L_11003747_SNP [dm6]	G	A	8.670e^-4	0.943	INTRON klu
2R	10343488	2R_10343488_SNP [dm3] 2R_14455983_SNP [dm6]	G	T	8.677e^-4	0.943	INTRON Oaz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10734648	3R_10734648_SNP [dm3] 3R_14908926_SNP [dm6]	A	C	8.688e^-4	0.943	INTERGENIC
3R	14303572	3R_14303572_SNP [dm3] 3R_18477850_SNP [dm6]	T	G	8.694e^-4	0.943	INTRON fru
2R	9356613	2R_9356613_SNP [dm3] 2R_13469108_SNP [dm6]	C	A	8.752e^-4	0.943	INTRON arr	TF binding site mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu
3L	1613534	3L_1613534_SNP [dm3] 3L_1613534_SNP [dm6]	C	T	8.752e^-4	0.943	NON_SYNONYMOUS_CODING CG12105 INTRON CG33791 & 1 other	TF binding site mE1_TFBS_cad
3L	18746629	3L_18746629_SNP [dm3] 3L_18753529_SNP [dm6]	C	A	8.752e^-4	0.943	INTRON ftz-f1
3R	26866149	3R_26866149_SNP [dm3] 3R_31040427_SNP [dm6]	A	G	8.752e^-4	0.943	INTRON CanA1
3R	16626739	3R_16626739_SNP [dm3] 3R_20801017_SNP [dm6]	T	A	8.793e^-4	0.943	INTRON Syp
3R	23498610	3R_23498610_SNP [dm3] 3R_27672888_SNP [dm6]	T	C	8.793e^-4	0.943	SYNONYMOUS_CODING unc80	TF binding site mE1_TFBS_chinmo
3R	23101706	3R_23101706_SNP [dm3] 3R_27275984_SNP [dm6]	T	A	8.837e^-4	0.943	INTRON CG5938	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	7789221	2R_7789221_SNP [dm3] 2R_11901716_SNP [dm6]	G	A	8.840e^-4	0.943	DOWNSTREAM Zip48C INTRON MCPH1	TF binding site mE1_TFBS_sens
X	14248864	X_14248864_SNP [dm3] X_14354831_SNP [dm6]	G	C	8.840e^-4	0.943	INTRON dpr8
2R	12854299	2R_12854299_SNP [dm3] 2R_16966794_SNP [dm6]	A	G	8.850e^-4	0.943	INTERGENIC
2R	12854312	2R_12854312_SNP [dm3] 2R_16966807_SNP [dm6]	A	G	8.850e^-4	0.943	INTERGENIC
2R	12854780	2R_12854780_SNP [dm3] 2R_16967275_SNP [dm6]	C	A	8.850e^-4	0.943	UPSTREAM tRNA:G3:53E INTERGENIC
2R	12854789	2R_12854789_DEL [dm3] 2R_16967284_DEL [dm6]	CC	C	8.850e^-4	0.943	UPSTREAM tRNA:G3:53E INTERGENIC
2R	12854819	2R_12854819_SNP [dm3] 2R_16967314_SNP [dm6]	C	G	8.850e^-4	0.943	UPSTREAM tRNA:G3:53E INTERGENIC
2R	12854820	2R_12854820_SNP [dm3] 2R_16967315_SNP [dm6]	T	A	8.850e^-4	0.943	UPSTREAM tRNA:G3:53E INTERGENIC
2R	9101069	2R_9101069_SNP [dm3] 2R_13213564_SNP [dm6]	A	T	8.850e^-4	0.943	INTRON AQP
2R	9101084	2R_9101084_SNP [dm3] 2R_13213579_SNP [dm6]	A	C	8.850e^-4	0.943	INTRON AQP
2R	9101091	2R_9101091_DEL [dm3] 2R_13213586_DEL [dm6]	TTGTAT	T	8.850e^-4	0.943	INTRON AQP
2R	9101103	2R_9101103_SNP [dm3] 2R_13213598_SNP [dm6]	C	G	8.850e^-4	0.943	INTRON AQP
2R	9101124	2R_9101124_SNP [dm3] 2R_13213619_SNP [dm6]	G	A	8.850e^-4	0.943	INTRON AQP
2R	9101135	2R_9101135_INS [dm3] 2R_13213630_INS [dm6]	T	TT	8.850e^-4	0.943	INTRON AQP
2R	9101188	2R_9101188_SNP [dm3] 2R_13213683_SNP [dm6]	T	C	8.850e^-4	0.943	INTRON AQP
3L	18149940	3L_18149940_INS [dm3] 3L_18156840_INS [dm6]	A	ACA	8.850e^-4	0.943	INTRON CG13699
3L	18149945	3L_18149945_SNP [dm3] 3L_18156845_SNP [dm6]	G	C	8.850e^-4	0.943	INTRON CG13699
3L	18149948	3L_18149948_SNP [dm3] 3L_18156848_SNP [dm6]	G	C	8.850e^-4	0.943	INTRON CG13699
2L	10064785	2L_10064785_SNP [dm3] 2L_10064785_SNP [dm6]	C	T	8.873e^-4	0.943	UTR_3_PRIME CG44153 DOWNSTREAM Spn31A
3L	18746710	3L_18746710_SNP [dm3] 3L_18753610_SNP [dm6]	A	T	8.874e^-4	0.943	INTRON ftz-f1
3L	18746714	3L_18746714_SNP [dm3] 3L_18753614_SNP [dm6]	C	A	8.874e^-4	0.943	INTRON ftz-f1
3L	18746715	3L_18746715_SNP [dm3] 3L_18753615_SNP [dm6]	C	G	8.874e^-4	0.943	INTRON ftz-f1
3L	18746716	3L_18746716_DEL [dm3] 3L_18753616_DEL [dm6]	ATACAACAATCATC...	A	8.874e^-4	0.943	INTRON ftz-f1
2R	14915508	2R_14915508_SNP [dm3] 2R_19028003_SNP [dm6]	T	C	8.879e^-4	0.943	INTRON 5-HT1B
2L	9011915	2L_9011915_SNP [dm3] 2L_9011915_SNP [dm6]	T	C	8.889e^-4	0.943	UPSTREAM CG13102 DOWNSTREAM CG9568 & 1 other INTERGENIC
2R	15319906	2R_15319906_SNP [dm3] 2R_19432401_SNP [dm6]	A	G	8.889e^-4	0.943	INTRON Fak
3L	9795806	3L_9795806_SNP [dm3] 3L_9802706_SNP [dm6]	C	T	8.889e^-4	0.943	UPSTREAM Ilp3 DOWNSTREAM Ilp4 INTRON CG32052	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5120888	3R_5120888_SNP [dm3] 3R_9295166_SNP [dm6]	C	T	8.889e^-4	0.943	UTR_3_PRIME CG8861
X	20005900	X_20005900_SNP [dm3] X_20111867_SNP [dm6]	C	T	8.889e^-4	0.943	INTERGENIC
X	20005906	X_20005906_SNP [dm3] X_20111873_SNP [dm6]	G	C	8.889e^-4	0.943	INTERGENIC
X	6107860	X_6107860_SNP [dm3] X_6213827_SNP [dm6]	G	A	8.889e^-4	0.943	INTERGENIC
X	7498289	X_7498289_DEL [dm3] X_7604256_DEL [dm6]	TAATATAATAAAAT...	T	8.889e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	7766302	2R_7766302_SNP [dm3] 2R_11878797_SNP [dm6]	A	G	8.926e^-4	0.943	SYNONYMOUS_CODING CG13185
3R	10838982	3R_10838982_DEL [dm3] 3R_15013260_DEL [dm6]	CC	C	8.926e^-4	0.943	INTERGENIC
3R	17144624	3R_17144624_SNP [dm3] 3R_21318902_SNP [dm6]	C	G	8.926e^-4	0.943	UTR_3_PRIME CG16791
3R	17144636	3R_17144636_SNP [dm3] 3R_21318914_SNP [dm6]	A	T	8.926e^-4	0.943	UTR_3_PRIME CG16791
3R	8093014	3R_8093014_SNP [dm3] 3R_12267292_SNP [dm6]	A	C	8.926e^-4	0.943	INTRON svp	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
2R	19038348	2R_19038348_SNP [dm3] 2R_23150825_SNP [dm6]	T	A	8.969e^-4	0.943	INTERGENIC
3L	11819405	3L_11819405_DEL [dm3] 3L_11826305_DEL [dm6]	TATCT	T	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819411	3L_11819411_SNP [dm3] 3L_11826311_SNP [dm6]	A	G	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819412	3L_11819412_SNP [dm3] 3L_11826312_SNP [dm6]	G	A	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819421	3L_11819421_SNP [dm3] 3L_11826321_SNP [dm6]	G	T	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819439	3L_11819439_DEL [dm3] 3L_11826339_DEL [dm6]	ACATA	A	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819448	3L_11819448_SNP [dm3] 3L_11826348_SNP [dm6]	A	C	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819456	3L_11819456_SNP [dm3] 3L_11826356_SNP [dm6]	G	T	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819487	3L_11819487_INS [dm3] 3L_11826387_INS [dm6]	C	CGTCTGTCCGTATGA...	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	11819524	3L_11819524_INS [dm3] 3L_11826424_INS [dm6]	T	TGAGATTCTTTAGACAAAGA...	8.969e^-4	0.943	UPSTREAM CG32095 DOWNSTREAM CycA INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
3L	5130489	3L_5130489_SNP [dm3] 3L_5137389_SNP [dm6]	C	T	8.969e^-4	0.943	SYNONYMOUS_CODING CG4611	TF binding site mE1_TFBS_chinmo
3R	10270734	3R_10270734_SNP [dm3] 3R_14445012_SNP [dm6]	C	T	8.969e^-4	0.943	INTRON cv-c	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	2840600	X_2840600_SNP [dm3] X_2946567_SNP [dm6]	G	C	8.969e^-4	0.943	UTR_3_PRIME CG14423 UPSTREAM CG17959 INTRON kirre	TF binding site mE1_TFBS_chinmo
3R	25269692	3R_25269692_DEL [dm3] 3R_29443970_DEL [dm6]	CATATAC	C	8.976e^-4	0.943	INTRON Ptp99A
2L	16790459	2L_16790459_SNP [dm3] 2L_16790459_SNP [dm6]	C	T	8.981e^-4	0.943	SYNONYMOUS_CODING Cyt-b5-r
2R	10029374	2R_10029374_DEL [dm3] 2R_14141869_DEL [dm6]	TT	T	8.994e^-4	0.943	UPSTREAM Prosap INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
2R	11707907	2R_11707907_SNP [dm3] 2R_15820402_SNP [dm6]	C	T	8.994e^-4	0.943	NON_SYNONYMOUS_CODING CG33465 INTRON tun
3R	25941482	3R_25941482_SNP [dm3] 3R_30115760_SNP [dm6]	C	A	9.017e^-4	0.943	INTRON sima
3L	7893215	3L_7893215_SNP [dm3] 3L_7900115_SNP [dm6]	T	G	9.039e^-4	0.943	NON_SYNONYMOUS_CODING pbl UPSTREAM pbl INTRON pbl
2L	13440815	2L_13440815_SNP [dm3] 2L_13440815_SNP [dm6]	T	G	9.042e^-4	0.943	DOWNSTREAM Tehao INTRON CG42784 EXON CR45683	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	9188662	2R_9188662_SNP [dm3] 2R_13301157_SNP [dm6]	C	T	9.050e^-4	0.943	SYNONYMOUS_CODING CG17047
2L	4079567	2L_4079567_SNP [dm3] 2L_4079567_SNP [dm6]	T	C	9.149e^-4	0.943	SYNONYMOUS_CODING ed
2L	5551004	2L_5551004_SNP [dm3] 2L_5551004_SNP [dm6]	A	C	9.149e^-4	0.943	UPSTREAM CG14014 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
2L	5551006	2L_5551006_SNP [dm3] 2L_5551006_SNP [dm6]	G	A	9.149e^-4	0.943	UPSTREAM CG14014 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
3L	14685152	3L_14685152_SNP [dm3] 3L_14692052_SNP [dm6]	A	G	9.196e^-4	0.943	DOWNSTREAM CG13477 INTRON ome
X	15363361	X_15363361_SNP [dm3] X_15469328_SNP [dm6]	T	C	9.196e^-4	0.943	SYNONYMOUS_CODING Grip128	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	11292592	2R_11292592_SNP [dm3] 2R_15405087_SNP [dm6]	A	G	9.212e^-4	0.943	INTRON CG43729 EXON CR45020	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	9317520	2L_9317520_DEL [dm3] 2L_9317520_DEL [dm6]	AAACCTAGT	A	9.229e^-4	0.943	INTERGENIC
2L	9317531	2L_9317531_DEL [dm3] 2L_9317531_DEL [dm6]	TATATAGGGG	T	9.229e^-4	0.943	INTERGENIC
2L	9317542	2L_9317542_DEL [dm3] 2L_9317542_DEL [dm6]	CT	C	9.229e^-4	0.943	INTERGENIC
3L	4661055	3L_4661055_SNP [dm3] 3L_4661055_SNP [dm6]	C	T	9.229e^-4	0.943	INTRON axo
2L	4177872	2L_4177872_SNP [dm3] 2L_4177872_SNP [dm6]	G	A	9.261e^-4	0.943	INTERGENIC
X	21917915	X_21917915_SNP [dm3] X_22516079_SNP [dm6]	T	C	9.280e^-4	0.943	INTRON CG17600
X	21920629	X_21920629_SNP [dm3] X_22518793_SNP [dm6]	C	A	9.280e^-4	0.943	INTRON CG17600
X	21920812	X_21920812_SNP [dm3] X_22518976_SNP [dm6]	C	T	9.280e^-4	0.943	INTRON CG17600
X	21920835	X_21920835_SNP [dm3] X_22518999_SNP [dm6]	G	A	9.280e^-4	0.943	INTRON CG17600
2R	10029516	2R_10029516_SNP [dm3] 2R_14142011_SNP [dm6]	C	T	9.297e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_ttk
3R	26612763	3R_26612763_SNP [dm3] 3R_30787041_SNP [dm6]	T	C	9.378e^-4	0.943	UTR_3_PRIME zfh1
2L	9731257	2L_9731257_SNP [dm3] 2L_9731257_SNP [dm6]	C	A	9.379e^-4	0.943	DOWNSTREAM CG13116 INTRON Nckx30C	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
2R	14413795	2R_14413795_SNP [dm3] 2R_18526290_SNP [dm6]	T	A	9.379e^-4	0.943	UTR_3_PRIME CG43066 DOWNSTREAM CG43066
3R	10507784	3R_10507784_SNP [dm3] 3R_14682062_SNP [dm6]	C	A	9.404e^-4	0.943	INTRON Meltrin	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3R	13590151	3R_13590151_SNP [dm3] 3R_17764429_SNP [dm6]	A	C	9.404e^-4	0.943	INTERGENIC
3R	14168501	3R_14168501_SNP [dm3] 3R_18342779_SNP [dm6]	G	A	9.404e^-4	0.943	INTRON CG15803
3R	4761749	3R_4761749_SNP [dm3] 3R_8936027_SNP [dm6]	T	A	9.404e^-4	0.943	NON_SYNONYMOUS_CODING osk UPSTREAM CR44020
2R	17322748	2R_17322748_SNP [dm3] 2R_21435243_SNP [dm6]	C	T	9.410e^-4	0.943	INTRON Sdc
2R	17322754	2R_17322754_SNP [dm3] 2R_21435249_SNP [dm6]	G	A	9.410e^-4	0.943	INTRON Sdc
3L	16551185	3L_16551185_SNP [dm3] 3L_16558085_SNP [dm6]	T	C	9.410e^-4	0.943	DOWNSTREAM CG4229 INTERGENIC
2L	553582	2L_553582_SNP [dm3] 2L_553582_SNP [dm6]	C	T	9.411e^-4	0.943	UPSTREAM Ets21C DOWNSTREAM rempA INTERGENIC
X	8935680	X_8935680_SNP [dm3] X_9041647_SNP [dm6]	G	T	9.413e^-4	0.943	UPSTREAM CG42388 INTRON CR43836 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl mE1_TFBS_Ubx
3L	15143967	3L_15143967_INS [dm3] 3L_15150867_INS [dm6]	A	AA	9.414e^-4	0.943	UTR_5_PRIME FucTA
2R	12829976	2R_12829976_SNP [dm3] 2R_16942471_SNP [dm6]	C	T	9.440e^-4	0.943	SPLICE_SITE_REGION Pkc53E INTRON Pkc53E
2R	9102165	2R_9102165_SNP [dm3] 2R_13214660_SNP [dm6]	C	T	9.442e^-4	0.943	UPSTREAM CG4627 & 1 other DOWNSTREAM CG4630 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_run
3L	8198178	3L_8198178_SNP [dm3] 3L_8205078_SNP [dm6]	C	G	9.442e^-4	0.943	INTERGENIC
X	5750003	X_5750003_SNP [dm3] X_5855970_SNP [dm6]	A	G	9.442e^-4	0.943	INTERGENIC
X	22045658	X_22045658_SNP [dm3] X_22643822_SNP [dm6]	A	C	9.460e^-4	0.943	INTERGENIC
X	22045665	X_22045665_SNP [dm3] X_22643829_SNP [dm6]	A	C	9.460e^-4	0.943	INTERGENIC
2R	17850561	2R_17850561_SNP [dm3] 2R_21963056_SNP [dm6]	A	G	9.469e^-4	0.943	INTERGENIC
2R	17184201	2R_17184201_SNP [dm3] 2R_21296696_SNP [dm6]	C	T	9.521e^-4	0.943	DOWNSTREAM CR44724 INTRON CG42672	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3L	7519072	3L_7519072_SNP [dm3] 3L_7525972_SNP [dm6]	T	C	9.521e^-4	0.943	INTRON ltl
3L	980707	3L_980707_SNP [dm3] 3L_980707_SNP [dm6]	G	A	9.521e^-4	0.943	DOWNSTREAM Glut1 INTRON Glut1
2L	17229569	2L_17229569_SNP [dm3] 2L_17229569_SNP [dm6]	T	A	9.591e^-4	0.943	INTRON beat-IIIc
3L	8856179	3L_8856179_SNP [dm3] 3L_8863079_SNP [dm6]	C	T	9.595e^-4	0.943	INTRON dally	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3R	15563012	3R_15563012_SNP [dm3] 3R_19737290_SNP [dm6]	T	G	9.612e^-4	0.943	INTRON GluClalpha
2R	5304956	2R_5304956_SNP [dm3] 2R_9417451_SNP [dm6]	T	C	9.617e^-4	0.943	SYNONYMOUS_CODING wun2
2R	16346787	2R_16346787_SNP [dm3] 2R_20459282_SNP [dm6]	G	C	9.629e^-4	0.943	INTRON CG12484
X	18250802	X_18250802_SNP [dm3] X_18356769_SNP [dm6]	C	A	9.629e^-4	0.943	UPSTREAM CG6123 INTERGENIC	transposable element FlyBase
X	18250822	X_18250822_SNP [dm3] X_18356789_SNP [dm6]	A	G	9.629e^-4	0.943	UPSTREAM CG6123 INTERGENIC	transposable element FlyBase
X	18251047	X_18251047_SNP [dm3] X_18357014_SNP [dm6]	C	A	9.629e^-4	0.943	UPSTREAM CG6123 INTERGENIC	transposable element FlyBase
X	18251104	X_18251104_SNP [dm3] X_18357071_SNP [dm6]	C	T	9.629e^-4	0.943	UPSTREAM CG6123 INTERGENIC	transposable element FlyBase
2L	17464648	2L_17464648_SNP [dm3] 2L_17464648_SNP [dm6]	C	G	9.652e^-4	0.943	INTRON BicD
2R	3896083	2R_3896083_SNP [dm3] 2R_8008578_SNP [dm6]	A	G	9.655e^-4	0.943	SYNONYMOUS_CODING Odc2 DOWNSTREAM CG14762	TF binding site mE1_TFBS_cad
3L	22324314	3L_22324314_SNP [dm3] 3L_22331214_SNP [dm6]	C	G	9.659e^-4	0.943	DOWNSTREAM CG32450 INTRON Ten-m
3L	22324731	3L_22324731_SNP [dm3] 3L_22331631_SNP [dm6]	T	C	9.659e^-4	0.943	DOWNSTREAM CG32450 INTRON Ten-m
3L	22329968	3L_22329968_SNP [dm3] 3L_22336868_SNP [dm6]	A	C	9.659e^-4	0.943	INTRON Ten-m
3R	21178032	3R_21178032_SNP [dm3] 3R_25352310_SNP [dm6]	T	C	9.659e^-4	0.943	DOWNSTREAM Fur1 INTRON Fur1
3R	22589412	3R_22589412_SNP [dm3] 3R_26763690_SNP [dm6]	C	T	9.659e^-4	0.943	INTERGENIC
3R	25645397	3R_25645397_SNP [dm3] 3R_29819675_SNP [dm6]	T	C	9.659e^-4	0.943	INTRON neo	TF binding site mE1_TFBS_hkb mE1_TFBS_sens mE1_TFBS_Trl
3R	7052157	3R_7052157_INS [dm3] 3R_11226435_INS [dm6]	A	AA	9.659e^-4	0.943	UTR_3_PRIME scpr-C UPSTREAM CG17726
3R	9689277	3R_9689277_SNP [dm3] 3R_13863555_SNP [dm6]	C	T	9.659e^-4	0.943	INTERGENIC
X	19082845	X_19082845_SNP [dm3] X_19188812_SNP [dm6]	C	T	9.661e^-4	0.943	INTRON Mec2	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5477184	2L_5477184_SNP [dm3] 2L_5477184_SNP [dm6]	C	T	9.690e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_sens
2R	5561987	2R_5561987_SNP [dm3] 2R_9674482_SNP [dm6]	A	G	9.703e^-4	0.943	INTRON Mmp2
2R	10134851	2R_10134851_DEL [dm3] 2R_14247346_DEL [dm6]	AA	A	9.717e^-4	0.943	INTRON Mdr50
X	3758278	X_3758278_SNP [dm3] X_3864245_SNP [dm6]	T	C	9.762e^-4	0.943	SYNONYMOUS_CODING yin	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	20329032	2R_20329032_SNP [dm3] 2R_24441509_SNP [dm6]	A	G	9.810e^-4	0.943	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	12702018	2R_12702018_SNP [dm3] 2R_16814513_SNP [dm6]	G	A	9.817e^-4	0.943	EXON CR44380
2R	13019263	2R_13019263_SNP [dm3] 2R_17131758_SNP [dm6]	A	T	9.817e^-4	0.943	UPSTREAM CR45273 INTERGENIC
2R	13019264	2R_13019264_SNP [dm3] 2R_17131759_SNP [dm6]	C	T	9.817e^-4	0.943	UPSTREAM CR45273 INTERGENIC
2R	14232037	2R_14232037_SNP [dm3] 2R_18344532_SNP [dm6]	A	G	9.817e^-4	0.943	INTRON sbb
2R	14620202	2R_14620202_SNP [dm3] 2R_18732697_SNP [dm6]	G	C	9.817e^-4	0.943	INTRON Hs3st-A
2R	15788216	2R_15788216_SNP [dm3] 2R_19900711_SNP [dm6]	G	A	9.817e^-4	0.943	INTERGENIC
2R	19510684	2R_19510684_SNP [dm3] 2R_23623161_SNP [dm6]	A	G	9.817e^-4	0.943	INTERGENIC
3L	13889050	3L_13889050_SNP [dm3] 3L_13895950_SNP [dm6]	T	C	9.817e^-4	0.943	INTRON dysc	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	8268046	3L_8268046_SNP [dm3] 3L_8274946_SNP [dm6]	A	T	9.817e^-4	0.943	INTRON Dscam4
3L	8268051	3L_8268051_SNP [dm3] 3L_8274951_SNP [dm6]	A	G	9.817e^-4	0.943	INTRON Dscam4
3L	8268053	3L_8268053_SNP [dm3] 3L_8274953_SNP [dm6]	A	G	9.817e^-4	0.943	INTRON Dscam4
3R	6193632	3R_6193632_SNP [dm3] 3R_10367910_SNP [dm6]	A	T	9.817e^-4	0.943	UPSTREAM Rfx INTRON Rfx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	16433951	X_16433951_SNP [dm3] X_16539918_SNP [dm6]	G	A	9.817e^-4	0.943	SYNONYMOUS_CODING CG9903	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	16434122	X_16434122_SNP [dm3] X_16540089_SNP [dm6]	C	T	9.817e^-4	0.943	SYNONYMOUS_CODING CG9903	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	16837699	X_16837699_SNP [dm3] X_16943666_SNP [dm6]	T	A	9.817e^-4	0.943	UTR_5_PRIME RhoGAP15B UPSTREAM CG13001	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	16837728	X_16837728_SNP [dm3] X_16943695_SNP [dm6]	A	C	9.817e^-4	0.943	UTR_5_PRIME RhoGAP15B UPSTREAM CG13001	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	16838350	X_16838350_SNP [dm3] X_16944317_SNP [dm6]	G	T	9.817e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	16838840	X_16838840_SNP [dm3] X_16944807_SNP [dm6]	A	C	9.817e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	16838963	X_16838963_SNP [dm3] X_16944930_SNP [dm6]	A	T	9.817e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	16838983	X_16838983_SNP [dm3] X_16944950_SNP [dm6]	A	C	9.817e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16839316	X_16839316_SNP [dm3] X_16945283_SNP [dm6]	C	T	9.817e^-4	0.943	INTRON RhoGAP15B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
X	2285320	X_2285320_SNP [dm3] X_2391287_SNP [dm6]	C	T	9.817e^-4	0.943	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
X	4952104	X_4952104_DEL [dm3] X_5058071_DEL [dm6]	AACA	A	9.817e^-4	0.943	INTRON CR44833 & 1 other
X	8942801	X_8942801_SNP [dm3] X_9048768_SNP [dm6]	G	T	9.817e^-4	0.943	INTRON CG42388 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Trl
X	8942851	X_8942851_SNP [dm3] X_9048818_SNP [dm6]	G	A	9.817e^-4	0.943	INTRON CG42388 EXON CR43836	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	8943122	X_8943122_SNP [dm3] X_9049089_SNP [dm6]	C	T	9.817e^-4	0.943	UPSTREAM CR43836 INTRON CG42388	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	1237407	2L_1237407_SNP [dm3] 2L_1237407_SNP [dm6]	T	C	9.822e^-4	0.943	INTERGENIC
2L	1237469	2L_1237469_SNP [dm3] 2L_1237469_SNP [dm6]	A	C	9.822e^-4	0.943	INTERGENIC
2L	19955563	2L_19955563_SNP [dm3] 2L_19955563_SNP [dm6]	C	A	9.839e^-4	0.943	SYNONYMOUS_CODING sick	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	14146837	3R_14146837_SNP [dm3] 3R_18321115_SNP [dm6]	T	C	9.882e^-4	0.943	INTRON CG31235
X	3972644	X_3972644_SNP [dm3] X_4078611_SNP [dm6]	T	C	9.885e^-4	0.943	SYNONYMOUS_CODING CG43689	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
X	3972704	X_3972704_SNP [dm3] X_4078671_SNP [dm6]	T	C	9.885e^-4	0.943	SYNONYMOUS_CODING CG43689	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9184048	2R_9184048_DEL [dm3] 2R_13296543_DEL [dm6]	AA	A	9.913e^-4	0.943	UPSTREAM Dh31-R DOWNSTREAM CG4734 INTERGENIC
3R	18821438	3R_18821438_SNP [dm3] 3R_22995716_SNP [dm6]	T	C	9.953e^-4	0.943	UPSTREAM CR43454 INTRON Nha2
3L	557032	3L_557032_SNP [dm3] 3L_557032_SNP [dm6]	C	G	9.980e^-4	0.943	INTRON hipk

By genomic position
Variant impact
Gene name

Climb_Week3 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results