DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=9.416e^-13)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_2L_t	7.445	0.0242

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2373 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	12641483	3L_12641483_SNP [dm3] 3L_12648383_SNP [dm6]	G	C	4.045e^-7	0.43	DOWNSTREAM CR43431 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
2R	11822820	2R_11822820_SNP [dm3] 2R_15935315_SNP [dm6]	C	A	4.587e^-7	0.43	SYNONYMOUS_CODING CG8297 UPSTREAM Iap2 DOWNSTREAM Mlf	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	14015256	3R_14015256_SNP [dm3] 3R_18189534_SNP [dm6]	T	C	2.216e^-6	0.658	SYNONYMOUS_CODING MED17 UPSTREAM CG12321	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	18917480	2R_18917480_SNP [dm3] 2R_23029957_SNP [dm6]	G	A	2.902e^-6	0.658	INTRON twi & 1 other
3L	9180908	3L_9180908_SNP [dm3] 3L_9187808_SNP [dm6]	C	A	3.083e^-6	0.658	INTERGENIC
3R	19206622	3R_19206622_SNP [dm3] 3R_23380900_SNP [dm6]	G	A	3.284e^-6	0.658	SYNONYMOUS_CODING CG4393	TF binding site mE1_TFBS_chinmo
3R	27281690	3R_27281690_SNP [dm3] 3R_31455968_SNP [dm6]	C	A	3.742e^-6	0.658	INTRON Gprk2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	11822829	2R_11822829_SNP [dm3] 2R_15935324_SNP [dm6]	C	T	4.525e^-6	0.658	SYNONYMOUS_CODING CG8297 UPSTREAM Iap2 DOWNSTREAM Mlf	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	12641484	3L_12641484_SNP [dm3] 3L_12648384_SNP [dm6]	T	G	4.696e^-6	0.658	DOWNSTREAM CR43431 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
X	12730510	X_12730510_SNP [dm3] X_12836477_SNP [dm6]	C	A	4.768e^-6	0.658	INTRON Pde9
3L	4701011	3L_4701011_SNP [dm3] 3L_4701011_SNP [dm6]	A	C	5.025e^-6	0.658	INTRON RhoGEF64C
3R	18423737	3R_18423737_SNP [dm3] 3R_22598015_SNP [dm6]	C	T	5.398e^-6	0.658	INTRON Efa6	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	4701369	3L_4701369_SNP [dm3] 3L_4701369_SNP [dm6]	C	T	6.308e^-6	0.658	INTRON RhoGEF64C
3L	4700971	3L_4700971_SNP [dm3] 3L_4700971_SNP [dm6]	C	A	6.370e^-6	0.658	INTRON RhoGEF64C
2L	10526475	2L_10526475_SNP [dm3] 2L_10526475_SNP [dm6]	C	G	6.564e^-6	0.658	INTERGENIC
2L	15953972	2L_15953972_SNP [dm3] 2L_15953972_SNP [dm6]	T	C	6.779e^-6	0.658	INTRON beat-Ib
2L	14056324	2L_14056324_SNP [dm3] 2L_14056324_SNP [dm6]	A	G	6.954e^-6	0.658	INTRON nAChRalpha5
2R	7007339	2R_7007339_SNP [dm3] 2R_11119834_SNP [dm6]	T	C	6.997e^-6	0.658	UTR_3_PRIME Cyp12d1-p DOWNSTREAM Cyp12d1-p
2L	10526465	2L_10526465_SNP [dm3] 2L_10526465_SNP [dm6]	T	A	7.470e^-6	0.658	INTERGENIC
2L	10526469	2L_10526469_SNP [dm3] 2L_10526469_SNP [dm6]	A	C	7.470e^-6	0.658	INTERGENIC
2L	10526455	2L_10526455_SNP [dm3] 2L_10526455_SNP [dm6]	G	A	7.749e^-6	0.658	INTERGENIC
3L	4701154	3L_4701154_SNP [dm3] 3L_4701154_SNP [dm6]	C	A	8.353e^-6	0.658	INTRON RhoGEF64C
3L	4701186	3L_4701186_SNP [dm3] 3L_4701186_SNP [dm6]	C	T	8.583e^-6	0.658	INTRON RhoGEF64C
2L	3262966	2L_3262966_SNP [dm3] 2L_3262966_SNP [dm6]	G	C	8.955e^-6	0.658	UPSTREAM CR45338 INTERGENIC
3L	12647311	3L_12647311_SNP [dm3] 3L_12654211_SNP [dm6]	A	G	9.097e^-6	0.658	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	12070583	3L_12070583_SNP [dm3] 3L_12077483_SNP [dm6]	G	A	1.085e^-5	0.658	INTRON Sema-5c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13780395	3L_13780395_SNP [dm3] 3L_13787295_SNP [dm6]	C	T	1.090e^-5	0.658	INTRON bru-3
X	13399845	X_13399845_SNP [dm3] X_13505812_SNP [dm6]	A	T	1.144e^-5	0.658	INTRON Neto
X	3823569	X_3823569_SNP [dm3] X_3929536_SNP [dm6]	A	G	1.191e^-5	0.658	INTRON CG42541
2L	14056321	2L_14056321_SNP [dm3] 2L_14056321_SNP [dm6]	T	G	1.226e^-5	0.658	INTRON nAChRalpha5
3L	11115216	3L_11115216_SNP [dm3] 3L_11122116_SNP [dm6]	T	A	1.235e^-5	0.658	SYNONYMOUS_CODING Ufd1-like DOWNSTREAM mRpL2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5134713	2L_5134713_SNP [dm3] 2L_5134713_SNP [dm6]	C	T	1.274e^-5	0.658	SYNONYMOUS_CODING Msp300 INTRON Msp300
3L	4521149	3L_4521149_SNP [dm3] 3L_4521149_SNP [dm6]	C	T	1.394e^-5	0.658	INTRON Tie
3L	10648482	3L_10648482_SNP [dm3] 3L_10655382_SNP [dm6]	A	T	1.411e^-5	0.658	INTRON CG32066
3L	4521226	3L_4521226_SNP [dm3] 3L_4521226_SNP [dm6]	T	C	1.510e^-5	0.658	INTRON Tie
3L	14497724	3L_14497724_SNP [dm3] 3L_14504624_SNP [dm6]	C	A	1.547e^-5	0.658	INTRON bbg
2L	14056317	2L_14056317_SNP [dm3] 2L_14056317_SNP [dm6]	A	G	1.568e^-5	0.658	INTRON nAChRalpha5
2R	17087208	2R_17087208_SNP [dm3] 2R_21199703_SNP [dm6]	C	G	1.578e^-5	0.658	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
3L	22557224	3L_22557224_SNP [dm3] 3L_22564124_SNP [dm6]	C	A	1.594e^-5	0.658	INTERGENIC
3L	10648717	3L_10648717_SNP [dm3] 3L_10655617_SNP [dm6]	T	A	1.595e^-5	0.658	INTRON CG32066
3R	21741221	3R_21741221_SNP [dm3] 3R_25915499_SNP [dm6]	T	G	1.606e^-5	0.658	SYNONYMOUS_CODING CG42235 DOWNSTREAM CG42235 INTRON CG42235
2R	7004530	2R_7004530_SNP [dm3] 2R_11117025_SNP [dm6]	T	A	1.655e^-5	0.658	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	13945259	3L_13945259_SNP [dm3] 3L_13952159_SNP [dm6]	T	A	1.719e^-5	0.658	INTRON CG32137
X	8291549	X_8291549_SNP [dm3] X_8397516_SNP [dm6]	A	C	1.769e^-5	0.658	NON_SYNONYMOUS_CODING CG15345
2R	7121593	2R_7121593_SNP [dm3] 2R_11234088_SNP [dm6]	A	G	1.808e^-5	0.658	NON_SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
3R	20440372	3R_20440372_INS [dm3] 3R_24614650_INS [dm6]	T	TG	1.849e^-5	0.658	INTRON mld
2L	10531640	2L_10531640_SNP [dm3] 2L_10531640_SNP [dm6]	C	A	1.883e^-5	0.658	UTR_3_PRIME Lip4 UPSTREAM CG18301 DOWNSTREAM Lip4
2R	16529056	2R_16529056_SNP [dm3] 2R_20641551_SNP [dm6]	T	A	1.884e^-5	0.658	UTR_3_PRIME maf-S UPSTREAM rig & 1 other DOWNSTREAM CG33785 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2R	6994275	2R_6994275_SNP [dm3] 2R_11106770_SNP [dm6]	G	T	1.909e^-5	0.658	UTR_5_PRIME luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	10526473	2L_10526473_SNP [dm3] 2L_10526473_SNP [dm6]	A	G	1.936e^-5	0.658	INTERGENIC
2R	7121606	2R_7121606_SNP [dm3] 2R_11234101_SNP [dm6]	C	T	1.937e^-5	0.658	SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
3L	13780404	3L_13780404_SNP [dm3] 3L_13787304_SNP [dm6]	A	C	1.953e^-5	0.658	INTRON bru-3
2R	19680144	2R_19680144_INS [dm3] 2R_23792621_INS [dm6]	C	GCATCCATCCA...	1.955e^-5	0.658	INTRON CG9850	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
2R	11810792	2R_11810792_SNP [dm3] 2R_15923287_SNP [dm6]	G	A	1.959e^-5	0.658	SYNONYMOUS_CODING bdg	TF binding site mE1_TFBS_cad
3R	26014491	3R_26014491_SNP [dm3] 3R_30188769_SNP [dm6]	A	G	1.980e^-5	0.658	INTRON CG9747
2R	18388359	2R_18388359_SNP [dm3] 2R_22500854_SNP [dm6]	T	C	2.020e^-5	0.658	INTRON px
2L	8584498	2L_8584498_SNP [dm3] 2L_8584498_SNP [dm6]	C	T	2.075e^-5	0.658	INTRON Sema-1a
3R	27281756	3R_27281756_SNP [dm3] 3R_31456034_SNP [dm6]	G	T	2.117e^-5	0.658	INTRON Gprk2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	10551758	2L_10551758_SNP [dm3] 2L_10551758_SNP [dm6]	C	T	2.124e^-5	0.658	INTRON Trim9	TF binding site mE1_TFBS_cad
2R	17088175	2R_17088175_SNP [dm3] 2R_21200670_SNP [dm6]	C	T	2.178e^-5	0.658	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	16864876	2L_16864876_SNP [dm3] 2L_16864876_SNP [dm6]	G	A	2.235e^-5	0.658	INTERGENIC
2L	16864878	2L_16864878_SNP [dm3] 2L_16864878_SNP [dm6]	A	T	2.235e^-5	0.658	INTERGENIC
3R	23585129	3R_23585129_SNP [dm3] 3R_27759407_SNP [dm6]	A	G	2.313e^-5	0.658	INTERGENIC	TF binding site mE1_TFBS_cad
2R	16954085	2R_16954085_SNP [dm3] 2R_21066580_SNP [dm6]	T	G	2.327e^-5	0.658	SYNONYMOUS_CODING Cht4	TF binding site mE1_TFBS_cad
2L	10509425	2L_10509425_SNP [dm3] 2L_10509425_SNP [dm6]	T	C	2.355e^-5	0.658	INTRON CG7384	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	11808615	2R_11808615_INS [dm3] 2R_15921110_INS [dm6]	A	ATC	2.412e^-5	0.658	INTRON sli	TF binding site BDTNP1_TFBS_dl
2R	7121591	2R_7121591_SNP [dm3] 2R_11234086_SNP [dm6]	G	A	2.450e^-5	0.658	SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
3R	23486869	3R_23486869_SNP [dm3] 3R_27661147_SNP [dm6]	A	T	2.473e^-5	0.658	UPSTREAM Mlc1 INTERGENIC
2L	8153321	2L_8153321_SNP [dm3] 2L_8153321_SNP [dm6]	A	T	2.486e^-5	0.658	SYNONYMOUS_CODING CG43394 INTRON CG8552	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	7004543	2R_7004543_SNP [dm3] 2R_11117038_SNP [dm6]	A	G	2.535e^-5	0.658	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	17086797	2R_17086797_SNP [dm3] 2R_21199292_SNP [dm6]	C	T	2.553e^-5	0.658	UTR_3_PRIME Lapsyn	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2R	11808618	2R_11808618_INS [dm3] 2R_15921113_INS [dm6]	A	ATCA	2.606e^-5	0.658	INTRON sli	TF binding site BDTNP1_TFBS_dl
3R	23584837	3R_23584837_SNP [dm3] 3R_27759115_SNP [dm6]	G	T	2.650e^-5	0.658	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	11117578	3L_11117578_SNP [dm3] 3L_11124478_SNP [dm6]	T	G	2.663e^-5	0.658	INTRON CG42575	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl
2R	6994584	2R_6994584_INS [dm3] 2R_11107079_INS [dm6]	A	ACATAC	2.673e^-5	0.658	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
X	4376251	X_4376251_SNP [dm3] X_4482218_SNP [dm6]	C	T	2.692e^-5	0.658	SYNONYMOUS_CODING bi INTRON CR32773
2L	13983851	2L_13983851_SNP [dm3] 2L_13983851_SNP [dm6]	G	A	2.700e^-5	0.658	SYNONYMOUS_CODING rk DOWNSTREAM NimC2	TF binding site mE1_TFBS_chinmo
2L	11886785	2L_11886785_SNP [dm3] 2L_11886785_SNP [dm6]	G	T	2.884e^-5	0.679	INTRON Pde1c
3L	10543884	3L_10543884_SNP [dm3] 3L_10550784_SNP [dm6]	A	G	2.891e^-5	0.679	INTRON A2bp1
X	16428953	X_16428953_SNP [dm3] X_16534920_SNP [dm6]	T	A	2.897e^-5	0.679	INTERGENIC
3L	10648718	3L_10648718_SNP [dm3] 3L_10655618_SNP [dm6]	T	A	3.008e^-5	0.694	INTRON CG32066
2R	17087207	2R_17087207_SNP [dm3] 2R_21199702_SNP [dm6]	C	G	3.036e^-5	0.694	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
3L	10874563	3L_10874563_SNP [dm3] 3L_10881463_SNP [dm6]	T	G	3.175e^-5	0.709	SYNONYMOUS_CODING CG6409	TF binding site mE1_TFBS_chinmo
2L	8174010	2L_8174010_SNP [dm3] 2L_8174010_SNP [dm6]	T	A	3.223e^-5	0.709	INTRON Piezo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	16916718	2R_16916718_SNP [dm3] 2R_21029213_SNP [dm6]	G	C	3.351e^-5	0.709	DOWNSTREAM CR45148 INTERGENIC
X	9254959	X_9254959_SNP [dm3] X_9360926_SNP [dm6]	T	C	3.368e^-5	0.709	SPLICE_SITE_REGION mgl INTRON mgl	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2R	4120072	2R_4120072_SNP [dm3] 2R_8232567_SNP [dm6]	A	G	3.430e^-5	0.709	UPSTREAM dpn INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2R	4120102	2R_4120102_SNP [dm3] 2R_8232597_SNP [dm6]	G	T	3.430e^-5	0.709	UPSTREAM dpn INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3L	11116986	3L_11116986_SNP [dm3] 3L_11123886_SNP [dm6]	A	C	3.511e^-5	0.709	UPSTREAM Ufd1-like INTRON CG42575	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	16428952	X_16428952_SNP [dm3] X_16534919_SNP [dm6]	A	G	3.553e^-5	0.709	INTERGENIC
2R	6994881	2R_6994881_INS [dm3] 2R_11107376_INS [dm6]	T	TTT	3.559e^-5	0.709	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	10555248	2L_10555248_SNP [dm3] 2L_10555248_SNP [dm6]	G	T	3.781e^-5	0.709	INTRON Trim9	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	4120059	2R_4120059_SNP [dm3] 2R_8232554_SNP [dm6]	A	T	3.800e^-5	0.709	UPSTREAM dpn INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2R	15782779	2R_15782779_SNP [dm3] 2R_19895274_SNP [dm6]	G	T	3.822e^-5	0.709	INTERGENIC
2R	14724388	2R_14724388_SNP [dm3] 2R_18836883_SNP [dm6]	C	T	3.853e^-5	0.709	UTR_3_PRIME CG15099 DOWNSTREAM CG15083
2L	4813763	2L_4813763_SNP [dm3] 2L_4813763_SNP [dm6]	C	T	3.855e^-5	0.709	INTRON CG15629
3L	8019464	3L_8019464_SNP [dm3] 3L_8026364_SNP [dm6]	T	C	3.877e^-5	0.709	INTRON nmo
3R	20662201	3R_20662201_SNP [dm3] 3R_24836479_SNP [dm6]	T	A	3.883e^-5	0.709	UPSTREAM sosie DOWNSTREAM CR45216 INTRON sosie
3L	2560217	3L_2560217_SNP [dm3] 3L_2560217_SNP [dm6]	G	A	3.909e^-5	0.709	SYNONYMOUS_CODING msn
3R	19042536	3R_19042536_SNP [dm3] 3R_23216814_SNP [dm6]	A	G	4.162e^-5	0.709	INTRON cnc
2R	16306809	2R_16306809_SNP [dm3] 2R_20419304_SNP [dm6]	G	A	4.233e^-5	0.709	INTERGENIC
3L	9180738	3L_9180738_SNP [dm3] 3L_9187638_SNP [dm6]	T	G	4.308e^-5	0.709	INTERGENIC
3R	25397981	3R_25397981_SNP [dm3] 3R_29572259_SNP [dm6]	C	T	4.491e^-5	0.709	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3L	14543077	3L_14543077_SNP [dm3] 3L_14549977_SNP [dm6]	T	G	4.531e^-5	0.709	INTRON CG9238	TF binding site mE1_TFBS_inv mE1_TFBS_zfh1
3L	10648477	3L_10648477_SNP [dm3] 3L_10655377_SNP [dm6]	G	A	4.560e^-5	0.709	INTRON CG32066
X	9254612	X_9254612_SNP [dm3] X_9360579_SNP [dm6]	G	A	4.672e^-5	0.709	INTRON mgl	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2L	4807934	2L_4807934_SNP [dm3] 2L_4807934_SNP [dm6]	C	G	4.676e^-5	0.709	INTERGENIC
2L	10101095	2L_10101095_SNP [dm3] 2L_10101095_SNP [dm6]	A	G	4.680e^-5	0.709	INTRON CG34109 & 1 other
2R	17802824	2R_17802824_SNP [dm3] 2R_21915319_SNP [dm6]	G	T	4.767e^-5	0.709	INTRON Fili
2R	18915287	2R_18915287_SNP [dm3] 2R_23027764_SNP [dm6]	G	A	4.770e^-5	0.709	INTRON twi & 1 other	TF binding site mE1_TFBS_inv
3L	12103757	3L_12103757_SNP [dm3] 3L_12110657_SNP [dm6]	G	T	4.812e^-5	0.709	INTERGENIC
3L	12081246	3L_12081246_SNP [dm3] 3L_12088146_SNP [dm6]	T	C	4.878e^-5	0.709	UPSTREAM CG17154 INTERGENIC
3R	22420091	3R_22420091_SNP [dm3] 3R_26594369_SNP [dm6]	T	C	4.937e^-5	0.709	INTRON scrib
2R	17087840	2R_17087840_SNP [dm3] 2R_21200335_SNP [dm6]	C	G	4.973e^-5	0.709	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
X	6240761	X_6240761_SNP [dm3] X_6346728_SNP [dm6]	G	T	4.979e^-5	0.709	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	12642854	3L_12642854_SNP [dm3] 3L_12649754_SNP [dm6]	G	A	4.983e^-5	0.709	EXON CR43431	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens
2R	17085774	2R_17085774_SNP [dm3] 2R_21198269_SNP [dm6]	C	G	5.004e^-5	0.709	NON_SYNONYMOUS_CODING Lapsyn
2L	4810518	2L_4810518_SNP [dm3] 2L_4810518_SNP [dm6]	G	A	5.038e^-5	0.709	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_sens
2L	4810560	2L_4810560_DEL [dm3] 2L_4810560_DEL [dm6]	GA	G	5.038e^-5	0.709	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_sens
2L	4811076	2L_4811076_SNP [dm3] 2L_4811076_SNP [dm6]	G	A	5.038e^-5	0.709	DOWNSTREAM CR45297 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_en mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
2L	4812611	2L_4812611_SNP [dm3] 2L_4812611_SNP [dm6]	C	T	5.038e^-5	0.709	UPSTREAM CR45297 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA
2R	7007374	2R_7007374_SNP [dm3] 2R_11119869_SNP [dm6]	C	T	5.096e^-5	0.709	UTR_3_PRIME Cyp12d1-p DOWNSTREAM Cyp12d1-p
3R	21949798	3R_21949798_SNP [dm3] 3R_26124076_SNP [dm6]	T	C	5.107e^-5	0.709	INTRON CG31324
3R	24137495	3R_24137495_SNP [dm3] 3R_28311773_SNP [dm6]	G	A	5.218e^-5	0.709	INTERGENIC
3L	4296393	3L_4296393_DEL [dm3] 3L_4296393_DEL [dm6]	CA	C	5.222e^-5	0.709	INTRON dyl	TF binding site mE1_TFBS_cad
3L	4296429	3L_4296429_SNP [dm3] 3L_4296429_SNP [dm6]	A	T	5.222e^-5	0.709	INTRON dyl	TF binding site mE1_TFBS_cad
3L	1364930	3L_1364930_SNP [dm3] 3L_1364930_SNP [dm6]	T	C	5.236e^-5	0.709	INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll mE1_TFBS_HSA
3L	12643079	3L_12643079_SNP [dm3] 3L_12649979_SNP [dm6]	G	A	5.310e^-5	0.709	EXON CR43431	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_sens
3R	10079154	3R_10079154_INS [dm3] 3R_14253432_INS [dm6]	T	TCT	5.364e^-5	0.709	INTRON Aats-met
4	141694	4_141694_SNP [dm3] 4_121068_SNP [dm6]	T	A	5.367e^-5	0.709	SYNONYMOUS_CODING Ank
2L	14054482	2L_14054482_SNP [dm3] 2L_14054482_SNP [dm6]	G	T	5.380e^-5	0.709	INTRON nAChRalpha5	TF binding site mE1_TFBS_Trl
2L	4814566	2L_4814566_SNP [dm3] 2L_4814566_SNP [dm6]	A	T	5.400e^-5	0.709	INTRON CG15629
3L	4701235	3L_4701235_SNP [dm3] 3L_4701235_SNP [dm6]	T	C	5.519e^-5	0.709	INTRON RhoGEF64C
2L	2549173	2L_2549173_SNP [dm3] 2L_2549173_SNP [dm6]	T	G	5.522e^-5	0.709	INTERGENIC
X	1161739	X_1161739_SNP [dm3] X_1267706_SNP [dm6]	C	A	5.598e^-5	0.709	INTRON Atf3
2R	17098683	2R_17098683_SNP [dm3] 2R_21211178_SNP [dm6]	G	A	5.614e^-5	0.709	UTR_5_PRIME CG44245 DOWNSTREAM Glycogenin INTRON CG44245
4	151585	4_151585_SNP [dm3] 4_130959_SNP [dm6]	A	T	5.626e^-5	0.709	INTERGENIC	transposable element FlyBase
2L	4865126	2L_4865126_SNP [dm3] 2L_4865126_SNP [dm6]	A	G	5.650e^-5	0.709	INTRON pog
3L	6870524	3L_6870524_SNP [dm3] 3L_6877424_SNP [dm6]	C	A	5.665e^-5	0.709	INTERGENIC
3L	10648820	3L_10648820_SNP [dm3] 3L_10655720_SNP [dm6]	A	G	5.677e^-5	0.709	INTRON CG32066
2R	16157357	2R_16157357_SNP [dm3] 2R_20269852_SNP [dm6]	G	A	5.697e^-5	0.709	SYNONYMOUS_CODING CG8908	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	14200352	2L_14200352_SNP [dm3] 2L_14200352_SNP [dm6]	T	C	5.712e^-5	0.709	INTRON Dyrk2
X	16531656	X_16531656_SNP [dm3] X_16637623_SNP [dm6]	G	A	5.768e^-5	0.709	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3L	12103726	3L_12103726_SNP [dm3] 3L_12110626_SNP [dm6]	G	A	5.827e^-5	0.709	INTERGENIC
2R	6369862	2R_6369862_SNP [dm3] 2R_10482357_SNP [dm6]	C	T	5.829e^-5	0.709	UTR_3_PRIME lola & 1 other DOWNSTREAM CG17765	TF binding site BDTNP1_TFBS_dl
2R	17087653	2R_17087653_SNP [dm3] 2R_21200148_SNP [dm6]	T	C	5.906e^-5	0.709	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
2R	6999812	2R_6999812_SNP [dm3] 2R_11112307_SNP [dm6]	A	G	5.932e^-5	0.709	INTRON luna
3L	13080624	3L_13080624_SNP [dm3] 3L_13087524_SNP [dm6]	A	G	5.964e^-5	0.709	UPSTREAM CG17300 EXON CR45749
3L	14542948	3L_14542948_SNP [dm3] 3L_14549848_SNP [dm6]	G	T	6.002e^-5	0.709	INTRON CG9238	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	18455857	3R_18455857_SNP [dm3] 3R_22630135_SNP [dm6]	C	T	6.015e^-5	0.709	SYNONYMOUS_CODING loco DOWNSTREAM CR43475 INTRON loco EXON CR43474	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	16422443	3L_16422443_SNP [dm3] 3L_16429343_SNP [dm6]	G	A	6.056e^-5	0.709	INTRON CG33158 & 1 other
3R	19904863	3R_19904863_SNP [dm3] 3R_24079141_SNP [dm6]	A	C	6.077e^-5	0.709	INTRON 4EHP
2L	8169175	2L_8169175_SNP [dm3] 2L_8169175_SNP [dm6]	T	A	6.120e^-5	0.709	INTRON Piezo
X	16428955	X_16428955_INS [dm3] X_16534922_INS [dm6]	T	TT	6.217e^-5	0.709	INTERGENIC
2L	8176191	2L_8176191_SNP [dm3] 2L_8176191_SNP [dm6]	T	C	6.262e^-5	0.709	INTRON Piezo
2L	8176222	2L_8176222_SNP [dm3] 2L_8176222_SNP [dm6]	C	T	6.262e^-5	0.709	INTRON Piezo
X	13402551	X_13402551_SNP [dm3] X_13508518_SNP [dm6]	C	T	6.293e^-5	0.709	INTRON Neto
2R	9457224	2R_9457224_SNP [dm3] 2R_13569719_SNP [dm6]	T	C	6.293e^-5	0.709	DOWNSTREAM CG42807 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Stat92E mE1_TFBS_zfh1
3L	2041056	3L_2041056_SNP [dm3] 3L_2041056_SNP [dm6]	G	T	6.309e^-5	0.709	SYNONYMOUS_CODING sls
3L	11119162	3L_11119162_SNP [dm3] 3L_11126062_SNP [dm6]	G	T	6.376e^-5	0.709	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad
3L	10874531	3L_10874531_SNP [dm3] 3L_10881431_SNP [dm6]	G	T	6.408e^-5	0.709	NON_SYNONYMOUS_CODING CG6409	TF binding site mE1_TFBS_chinmo
3R	19845243	3R_19845243_SNP [dm3] 3R_24019521_SNP [dm6]	T	A	6.482e^-5	0.709	INTRON KrT95D
X	4572297	X_4572297_SNP [dm3] X_4678264_SNP [dm6]	C	T	6.498e^-5	0.709	UPSTREAM rap INTRON rap	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	11804889	2R_11804889_INS [dm3] 2R_15917384_INS [dm6]	T	TT	6.512e^-5	0.709	DOWNSTREAM CR44373 INTRON sli	TF binding site mE1_TFBS_cad
3R	7148040	3R_7148040_SNP [dm3] 3R_11322318_SNP [dm6]	C	T	6.518e^-5	0.709	INTERGENIC
2R	7005107	2R_7005107_SNP [dm3] 2R_11117602_SNP [dm6]	C	T	6.522e^-5	0.709	UTR_3_PRIME Cyp12d1-p
X	16428957	X_16428957_SNP [dm3] X_16534924_SNP [dm6]	T	C	6.594e^-5	0.709	INTERGENIC
X	12353082	X_12353082_SNP [dm3] X_12459049_SNP [dm6]	G	A	6.645e^-5	0.709	DOWNSTREAM Rab40 INTERGENIC
X	16512168	X_16512168_SNP [dm3] X_16618135_SNP [dm6]	T	G	6.662e^-5	0.709	INTRON CG9782	TF binding site BDTNP1_TFBS_dl
3R	16695604	3R_16695604_SNP [dm3] 3R_20869882_SNP [dm6]	G	C	6.666e^-5	0.709	INTERGENIC
2L	8180150	2L_8180150_SNP [dm3] 2L_8180150_SNP [dm6]	G	C	6.733e^-5	0.709	INTRON Piezo	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	8182210	2L_8182210_DEL [dm3] 2L_8182210_DEL [dm6]	TTACTAA	C	6.733e^-5	0.709	DOWNSTREAM Piezo INTRON Piezo
2L	8182238	2L_8182238_SNP [dm3] 2L_8182238_SNP [dm6]	A	C	6.733e^-5	0.709	DOWNSTREAM Piezo INTRON Piezo
X	17905870	X_17905870_SNP [dm3] X_18011837_SNP [dm6]	T	C	6.767e^-5	0.709	INTRON Sh
3L	11478577	3L_11478577_SNP [dm3] 3L_11485477_SNP [dm6]	C	T	6.777e^-5	0.709	INTERGENIC
2R	11804696	2R_11804696_SNP [dm3] 2R_15917191_SNP [dm6]	G	C	6.853e^-5	0.709	DOWNSTREAM CR44373 INTRON sli	TF binding site mE1_TFBS_cad
2L	8169173	2L_8169173_SNP [dm3] 2L_8169173_SNP [dm6]	C	A	6.858e^-5	0.709	INTRON Piezo
3L	10965460	3L_10965460_SNP [dm3] 3L_10972360_SNP [dm6]	G	A	6.870e^-5	0.709	UPSTREAM CG14147 INTERGENIC
2L	4809965	2L_4809965_SNP [dm3] 2L_4809965_SNP [dm6]	G	T	6.965e^-5	0.709	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3L	13784385	3L_13784385_SNP [dm3] 3L_13791285_SNP [dm6]	G	C	6.966e^-5	0.709	INTRON bru-3
2L	8182269	2L_8182269_INS [dm3] 2L_8182269_INS [dm6]	T	TGTTT	6.979e^-5	0.709	DOWNSTREAM Piezo INTRON Piezo
2L	8182278	2L_8182278_SNP [dm3] 2L_8182278_SNP [dm6]	T	C	6.979e^-5	0.709	DOWNSTREAM Piezo INTRON Piezo
2L	5133768	2L_5133768_SNP [dm3] 2L_5133768_SNP [dm6]	A	G	7.010e^-5	0.709	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	6796835	2R_6796835_SNP [dm3] 2R_10909330_SNP [dm6]	C	T	7.045e^-5	0.709	UPSTREAM Obp47a INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	22970267	3L_22970267_SNP [dm3] 3L_22977167_SNP [dm6]	T	A	7.054e^-5	0.709	INTERGENIC
3L	7868429	3L_7868429_SNP [dm3] 3L_7875329_SNP [dm6]	C	T	7.058e^-5	0.709	INTRON CG32365	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
3R	14667366	3R_14667366_SNP [dm3] 3R_18841644_SNP [dm6]	A	G	7.109e^-5	0.709	INTRON CG18208
2R	7165181	2R_7165181_SNP [dm3] 2R_11277676_SNP [dm6]	G	A	7.115e^-5	0.709	DOWNSTREAM Cpr47Eg INTERGENIC
2L	4972393	2L_4972393_SNP [dm3] 2L_4972393_SNP [dm6]	A	C	7.142e^-5	0.709	SYNONYMOUS_CODING CG14043 UPSTREAM l_2_05714 INTRON l_2_05714	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_inv mE1_TFBS_sens
2R	7039004	2R_7039004_SNP [dm3] 2R_11151499_SNP [dm6]	C	T	7.248e^-5	0.714	INTRON CG13229
3L	12098869	3L_12098869_SNP [dm3] 3L_12105769_SNP [dm6]	G	A	7.280e^-5	0.714	INTERGENIC
4	995018	4_995018_SNP [dm3] 4_974392_SNP [dm6]	A	G	7.319e^-5	0.714	UPSTREAM sphinx INTRON fuss	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10460322	2R_10460322_SNP [dm3] 2R_14572817_SNP [dm6]	C	A	7.351e^-5	0.714	SYNONYMOUS_CODING LamC INTRON ttv
2L	8184061	2L_8184061_SNP [dm3] 2L_8184061_SNP [dm6]	C	G	7.517e^-5	0.727	INTRON Piezo
4	915832	4_915832_SNP [dm3] 4_895206_SNP [dm6]	T	A	7.600e^-5	0.728	INTRON unc-13	transposable element FlyBase
3R	10080443	3R_10080443_SNP [dm3] 3R_14254721_SNP [dm6]	T	C	7.683e^-5	0.728	INTRON Aats-met
2R	2961900	2R_2961900_SNP [dm3] 2R_7074395_SNP [dm6]	A	G	7.766e^-5	0.728	UPSTREAM CG12831 INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	1551183	3L_1551183_SNP [dm3] 3L_1551183_SNP [dm6]	C	T	7.778e^-5	0.728	SYNONYMOUS_CODING Cct1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	17905961	X_17905961_SNP [dm3] X_18011928_SNP [dm6]	A	T	7.783e^-5	0.728	INTRON Sh
3L	10875845	3L_10875845_SNP [dm3] 3L_10882745_SNP [dm6]	G	A	7.789e^-5	0.728	UPSTREAM CG7949 & 1 other INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
2R	16157345	2R_16157345_SNP [dm3] 2R_20269840_SNP [dm6]	T	C	7.802e^-5	0.728	SYNONYMOUS_CODING CG8908	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	19735022	3R_19735022_SNP [dm3] 3R_23909300_SNP [dm6]	C	T	7.921e^-5	0.732	INTRON sba
2L	8172461	2L_8172461_SNP [dm3] 2L_8172461_SNP [dm6]	G	C	7.923e^-5	0.732	INTRON Piezo
3L	13200458	3L_13200458_SNP [dm3] 3L_13207358_SNP [dm6]	A	T	8.012e^-5	0.737	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	10531017	2L_10531017_SNP [dm3] 2L_10531017_SNP [dm6]	T	C	8.085e^-5	0.74	SYNONYMOUS_CODING Lip4 UPSTREAM CG18301
X	4956410	X_4956410_SNP [dm3] X_5062377_SNP [dm6]	G	A	8.204e^-5	0.747	INTRON CR44833 & 1 other	TF binding site BDTNP1_TFBS_dl
2R	16812840	2R_16812840_SNP [dm3] 2R_20925335_SNP [dm6]	C	G	8.289e^-5	0.751	INTRON Rx
3R	14015231	3R_14015231_SNP [dm3] 3R_18189509_SNP [dm6]	C	T	8.367e^-5	0.754	SYNONYMOUS_CODING MED17 UPSTREAM CG12321	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	10555304	2L_10555304_DEL [dm3] 2L_10555304_DEL [dm6]	ATGAACTGTATGAAAAGGCA...	A	8.460e^-5	0.755	INTRON Trim9	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	11119217	3L_11119217_SNP [dm3] 3L_11126117_SNP [dm6]	A	T	8.585e^-5	0.755	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	20661315	3R_20661315_INS [dm3] 3R_24835593_INS [dm6]	A	ATACACA	8.602e^-5	0.755	UPSTREAM CR45216 & 1 other INTRON sosie	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
4	1095464	4_1095464_SNP [dm3] 4_1074838_SNP [dm6]	C	G	8.607e^-5	0.755	NON_SYNONYMOUS_CODING Rfabg	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	1364929	3L_1364929_SNP [dm3] 3L_1364929_SNP [dm6]	T	A	8.631e^-5	0.755	INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll mE1_TFBS_HSA
3R	21951290	3R_21951290_SNP [dm3] 3R_26125568_SNP [dm6]	G	T	8.690e^-5	0.755	INTRON CG31324
3R	20661325	3R_20661325_SNP [dm3] 3R_24835603_SNP [dm6]	C	A	8.717e^-5	0.755	UPSTREAM CR45216 & 1 other INTRON sosie	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2R	14415637	2R_14415637_SNP [dm3] 2R_18528132_SNP [dm6]	C	A	8.732e^-5	0.755	INTRON CG10924	TF binding site mE1_TFBS_Trl
3R	17910797	3R_17910797_SNP [dm3] 3R_22085075_SNP [dm6]	T	C	8.785e^-5	0.755	DOWNSTREAM CG5778 INTERGENIC
2L	5134794	2L_5134794_SNP [dm3] 2L_5134794_SNP [dm6]	A	G	8.840e^-5	0.755	SYNONYMOUS_CODING Msp300 INTRON Msp300
2R	7168470	2R_7168470_SNP [dm3] 2R_11280965_SNP [dm6]	T	C	8.891e^-5	0.755	UTR_3_PRIME Vhl & 1 other DOWNSTREAM Vhl
2R	6994880	2R_6994880_SNP [dm3] 2R_11107375_SNP [dm6]	A	T	8.943e^-5	0.755	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	19486398	2R_19486398_SNP [dm3] 2R_23598875_SNP [dm6]	T	C	8.956e^-5	0.755	UTR_3_PRIME apt DOWNSTREAM CG42559 & 1 other
2L	8171417	2L_8171417_SNP [dm3] 2L_8171417_SNP [dm6]	G	T	9.018e^-5	0.755	INTRON Piezo
2R	952885	2R_952885_SNP [dm3] 2R_5065380_SNP [dm6]	C	G	9.094e^-5	0.755	UTR_3_PRIME TpnC41C DOWNSTREAM TpnC41C
2R	16157402	2R_16157402_SNP [dm3] 2R_20269897_SNP [dm6]	G	A	9.147e^-5	0.755	SYNONYMOUS_CODING CG8908	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	6041532	2R_6041532_SNP [dm3] 2R_10154027_SNP [dm6]	T	G	9.182e^-5	0.755	INTRON CR45133 & 1 other
2L	14618301	2L_14618301_SNP [dm3] 2L_14618301_SNP [dm6]	A	G	9.201e^-5	0.755	NON_SYNONYMOUS_CODING Adhr UTR_3_PRIME Adh DOWNSTREAM Adh INTRON osp
2R	11810303	2R_11810303_INS [dm3] 2R_15922798_INS [dm6]	T	TTTTGT	9.227e^-5	0.755	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1
2R	15058603	2R_15058603_SNP [dm3] 2R_19171098_SNP [dm6]	T	A	9.241e^-5	0.755	SYNONYMOUS_CODING CG10737
X	6240862	X_6240862_DEL [dm3] X_6346829_DEL [dm6]	ACATCCCAATA...	A	9.358e^-5	0.755	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
3R	25472011	3R_25472011_SNP [dm3] 3R_29646289_SNP [dm6]	C	T	9.433e^-5	0.755	INTRON Dop1R2
2R	11854066	2R_11854066_SNP [dm3] 2R_15966561_SNP [dm6]	T	A	9.445e^-5	0.755	INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	15101921	3R_15101921_SNP [dm3] 3R_19276199_SNP [dm6]	G	A	9.468e^-5	0.755	INTERGENIC
2L	10530912	2L_10530912_SNP [dm3] 2L_10530912_SNP [dm6]	C	T	9.533e^-5	0.755	SYNONYMOUS_CODING Lip4 UPSTREAM CG18301
2L	16864890	2L_16864890_SNP [dm3] 2L_16864890_SNP [dm6]	A	C	9.544e^-5	0.755	INTERGENIC
2L	4812519	2L_4812519_SNP [dm3] 2L_4812519_SNP [dm6]	T	G	9.581e^-5	0.755	UPSTREAM CR45297 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_zfh1
3L	15543944	3L_15543944_SNP [dm3] 3L_15550844_SNP [dm6]	C	T	9.587e^-5	0.755	INTRON CrebA	TF binding site mE1_TFBS_cad
X	7978221	X_7978221_SNP [dm3] X_8084188_SNP [dm6]	A	G	9.587e^-5	0.755	SYNONYMOUS_CODING CG2256 UPSTREAM CR45535	TF binding site mE1_TFBS_chinmo
3L	7884308	3L_7884308_SNP [dm3] 3L_7891208_SNP [dm6]	G	A	9.685e^-5	0.755	INTRON CG32365
3L	11119555	3L_11119555_SNP [dm3] 3L_11126455_SNP [dm6]	T	A	9.732e^-5	0.755	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	18226209	2R_18226209_SNP [dm3] 2R_22338704_SNP [dm6]	A	G	9.812e^-5	0.755	INTRON Liprin-gamma
2R	7030387	2R_7030387_SNP [dm3] 2R_11142882_SNP [dm6]	C	T	9.815e^-5	0.755	SYNONYMOUS_CODING CG13229
4	1237183	4_1237183_SNP [dm3] 4_1233457_SNP [dm6]	T	G	9.825e^-5	0.755	NON_SYNONYMOUS_CODING Caps	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
3R	12516603	3R_12516603_SNP [dm3] 3R_16690881_SNP [dm6]	A	C	9.854e^-5	0.755	INTRON Ubx	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	3245123	X_3245123_SNP [dm3] X_3351090_SNP [dm6]	C	T	9.889e^-5	0.755	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	11848846	2R_11848846_SNP [dm3] 2R_15961341_SNP [dm6]	C	T	9.949e^-5	0.755	SYNONYMOUS_CODING Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	4810049	2L_4810049_SNP [dm3] 2L_4810049_SNP [dm6]	T	A	1.010e^-4	0.755	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2R	13922503	2R_13922503_SNP [dm3] 2R_18034998_SNP [dm6]	A	G	1.011e^-4	0.755	INTERGENIC
3R	19483410	3R_19483410_SNP [dm3] 3R_23657688_SNP [dm6]	C	T	1.024e^-4	0.755	INTRON CG31145
X	6241004	X_6241004_SNP [dm3] X_6346971_SNP [dm6]	A	T	1.027e^-4	0.755	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
X	6240903	X_6240903_SNP [dm3] X_6346870_SNP [dm6]	C	T	1.038e^-4	0.755	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
4	1118259	4_1118259_SNP [dm3] 4_1097633_SNP [dm6]	C	A	1.047e^-4	0.755	UPSTREAM sv INTRON sv	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2L	8169176	2L_8169176_SNP [dm3] 2L_8169176_SNP [dm6]	A	C	1.051e^-4	0.755	INTRON Piezo
3R	25152618	3R_25152618_DEL [dm3] 3R_29326896_DEL [dm6]	GG	G	1.052e^-4	0.755	INTERGENIC
3L	7615992	3L_7615992_SNP [dm3] 3L_7622892_SNP [dm6]	A	T	1.054e^-4	0.755	INTRON CG33275
3R	25980152	3R_25980152_SNP [dm3] 3R_30154430_SNP [dm6]	A	C	1.055e^-4	0.755	INTRON CG11498	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
2L	8179867	2L_8179867_SNP [dm3] 2L_8179867_SNP [dm6]	C	T	1.060e^-4	0.755	SPLICE_SITE_REGION Piezo INTRON Piezo	TF binding site mE1_TFBS_cad
3L	15265465	3L_15265465_INS [dm3] 3L_15272365_INS [dm6]	A	AGTATGTA	1.061e^-4	0.755	INTERGENIC
X	6240906	X_6240906_SNP [dm3] X_6346873_SNP [dm6]	C	G	1.063e^-4	0.755	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
X	3134714	X_3134714_SNP [dm3] X_3240681_SNP [dm6]	A	C	1.066e^-4	0.755	UPSTREAM ng2 DOWNSTREAM ng3 INTRON dnc
3L	10543912	3L_10543912_SNP [dm3] 3L_10550812_SNP [dm6]	G	A	1.069e^-4	0.755	INTRON A2bp1
2L	4814275	2L_4814275_SNP [dm3] 2L_4814275_SNP [dm6]	T	G	1.078e^-4	0.755	INTRON CG15629
3R	7524817	3R_7524817_SNP [dm3] 3R_11699095_SNP [dm6]	A	C	1.078e^-4	0.755	DOWNSTREAM CG14717 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2R	7451466	2R_7451466_DEL [dm3] 2R_11563961_DEL [dm6]	AA	A	1.081e^-4	0.755	INTERGENIC
X	4719972	X_4719972_SNP [dm3] X_4825939_SNP [dm6]	T	C	1.087e^-4	0.755	UPSTREAM CG12682 INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	10552442	2L_10552442_SNP [dm3] 2L_10552442_SNP [dm6]	T	A	1.088e^-4	0.755	INTRON Trim9	TF binding site mE1_TFBS_cad
2L	8171594	2L_8171594_SNP [dm3] 2L_8171594_SNP [dm6]	T	C	1.090e^-4	0.755	INTRON Piezo
2L	15056990	2L_15056990_SNP [dm3] 2L_15056990_SNP [dm6]	A	T	1.094e^-4	0.755	INTRON ck	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_Trl
X	21353374	X_21353374_SNP [dm3] X_21482347_SNP [dm6]	A	G	1.105e^-4	0.755	DOWNSTREAM CR45511 INTERGENIC
3R	17613005	3R_17613005_SNP [dm3] 3R_21787283_SNP [dm6]	A	G	1.108e^-4	0.755	SPLICE_SITE_REGION CASK INTRON CASK
2L	8167999	2L_8167999_SNP [dm3] 2L_8167999_SNP [dm6]	C	G	1.108e^-4	0.755	INTRON Piezo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	16683063	3L_16683063_SNP [dm3] 3L_16689963_SNP [dm6]	T	A	1.114e^-4	0.755	DOWNSTREAM CR45179 INTRON Lasp & 2 others
3L	2360670	3L_2360670_SNP [dm3] 3L_2360670_SNP [dm6]	T	G	1.116e^-4	0.755	SYNONYMOUS_CODING CG13801
2L	10527977	2L_10527977_SNP [dm3] 2L_10527977_SNP [dm6]	G	A	1.128e^-4	0.755	INTRON Lip4	TF binding site BDTNP1_TFBS_dl
3L	12070578	3L_12070578_SNP [dm3] 3L_12077478_SNP [dm6]	A	C	1.132e^-4	0.755	INTRON Sema-5c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20334443	3R_20334443_SNP [dm3] 3R_24508721_SNP [dm6]	T	G	1.132e^-4	0.755	DOWNSTREAM nAChRbeta2 INTERGENIC
3L	1364939	3L_1364939_SNP [dm3] 3L_1364939_SNP [dm6]	G	A	1.133e^-4	0.755	INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll mE1_TFBS_HSA
X	6240826	X_6240826_SNP [dm3] X_6346793_SNP [dm6]	T	C	1.139e^-4	0.755	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z
3L	15156125	3L_15156125_SNP [dm3] 3L_15163025_SNP [dm6]	A	G	1.158e^-4	0.755	SYNONYMOUS_CODING CG7011 DOWNSTREAM CG6878	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens
2L	2858507	2L_2858507_SNP [dm3] 2L_2858507_SNP [dm6]	G	C	1.159e^-4	0.755	INTRON CG2991	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	14493142	3L_14493142_SNP [dm3] 3L_14500042_SNP [dm6]	C	T	1.160e^-4	0.755	INTRON bbg
3L	14493143	3L_14493143_SNP [dm3] 3L_14500043_SNP [dm6]	T	A	1.160e^-4	0.755	INTRON bbg
2R	6982326	2R_6982326_SNP [dm3] 2R_11094821_SNP [dm6]	A	G	1.161e^-4	0.755	INTRON luna
3R	26056735	3R_26056735_SNP [dm3] 3R_30231013_SNP [dm6]	C	T	1.162e^-4	0.755	INTERGENIC	TF binding site BDTNP1_TFBS_prd
2R	11979897	2R_11979897_SNP [dm3] 2R_16092392_SNP [dm6]	C	T	1.172e^-4	0.755	INTRON Dg	TF binding site mE1_TFBS_HSA
3L	22103943	3L_22103943_SNP [dm3] 3L_22110843_SNP [dm6]	T	G	1.174e^-4	0.755	INTERGENIC
2L	10531459	2L_10531459_SNP [dm3] 2L_10531459_SNP [dm6]	A	T	1.179e^-4	0.755	UTR_3_PRIME Lip4 UPSTREAM CG18301
3L	11478697	3L_11478697_SNP [dm3] 3L_11485597_SNP [dm6]	T	C	1.180e^-4	0.755	INTERGENIC
2L	6896079	2L_6896079_SNP [dm3] 2L_6896079_SNP [dm6]	G	C	1.184e^-4	0.755	UPSTREAM Nlg2 INTRON Nlg2	TF binding site mE1_TFBS_chinmo
4	1256688	4_1256688_SNP [dm3] 4_1252962_SNP [dm6]	C	G	1.189e^-4	0.755	INTRON Caps	transposable element FlyBase
3R	23181208	3R_23181208_SNP [dm3] 3R_27355486_SNP [dm6]	C	T	1.191e^-4	0.755	INTRON CG42534
X	12730603	X_12730603_SNP [dm3] X_12836570_SNP [dm6]	A	C	1.202e^-4	0.755	INTRON Pde9
2R	6041504	2R_6041504_SNP [dm3] 2R_10153999_SNP [dm6]	A	C	1.206e^-4	0.755	INTRON CR45133 & 1 other
2L	6515958	2L_6515958_SNP [dm3] 2L_6515958_SNP [dm6]	G	A	1.218e^-4	0.755	INTRON CG31637
2L	15650539	2L_15650539_SNP [dm3] 2L_15650539_SNP [dm6]	A	G	1.221e^-4	0.755	SYNONYMOUS_CODING CG4587	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	25982751	3R_25982751_SNP [dm3] 3R_30157029_SNP [dm6]	G	A	1.222e^-4	0.755	INTRON CG11498	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4687060	3L_4687060_SNP [dm3] 3L_4687060_SNP [dm6]	A	C	1.227e^-4	0.755	UTR_5_PRIME axo DOWNSTREAM CG7514
4	1028653	4_1028653_SNP [dm3] 4_1008027_SNP [dm6]	G	A	1.228e^-4	0.755	DOWNSTREAM toy INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
3L	10965381	3L_10965381_SNP [dm3] 3L_10972281_SNP [dm6]	C	T	1.228e^-4	0.755	UPSTREAM CG14147 INTERGENIC
3L	8221097	3L_8221097_SNP [dm3] 3L_8227997_SNP [dm6]	A	G	1.230e^-4	0.755	INTERGENIC
3R	14517800	3R_14517800_SNP [dm3] 3R_18692078_SNP [dm6]	C	T	1.242e^-4	0.755	INTRON Muc91C
3R	2732666	3R_2732666_SNP [dm3] 3R_6906944_SNP [dm6]	A	T	1.244e^-4	0.755	DOWNSTREAM Antp INTRON Antp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19152616	2R_19152616_SNP [dm3] 2R_23265093_SNP [dm6]	C	T	1.249e^-4	0.755	SYNONYMOUS_CODING CG12782	TF binding site mE1_TFBS_chinmo
3L	11120211	3L_11120211_INS [dm3] 3L_11127111_INS [dm6]	A	AT	1.251e^-4	0.755	INTRON CG42575	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
3R	25061331	3R_25061331_SNP [dm3] 3R_29235609_SNP [dm6]	G	A	1.252e^-4	0.755	DOWNSTREAM CG15817 INTRON CG11951	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	10892733	2R_10892733_SNP [dm3] 2R_15005228_SNP [dm6]	T	A	1.258e^-4	0.755	INTERGENIC
2L	3824453	2L_3824453_SNP [dm3] 2L_3824453_SNP [dm6]	A	G	1.265e^-4	0.755	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	16719035	3R_16719035_SNP [dm3] 3R_20893313_SNP [dm6]	T	G	1.268e^-4	0.755	EXON CR44947
2L	4690860	2L_4690860_SNP [dm3] 2L_4690860_SNP [dm6]	C	T	1.276e^-4	0.755	UPSTREAM CG3251 INTERGENIC
2R	7121702	2R_7121702_SNP [dm3] 2R_11234197_SNP [dm6]	G	A	1.283e^-4	0.755	SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
3L	11119550	3L_11119550_SNP [dm3] 3L_11126450_SNP [dm6]	C	A	1.285e^-4	0.755	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	12325010	3L_12325010_SNP [dm3] 3L_12331910_SNP [dm6]	T	C	1.288e^-4	0.755	INTRON CG32105	TF binding site mE1_TFBS_cad
3R	23576711	3R_23576711_SNP [dm3] 3R_27750989_SNP [dm6]	T	A	1.289e^-4	0.755	INTERGENIC	insulator Insulator_Class_II.mE01
2R	10565784	2R_10565784_SNP [dm3] 2R_14678279_SNP [dm6]	T	G	1.292e^-4	0.755	UPSTREAM CG30480 & 1 other INTRON mspo
2L	4813102	2L_4813102_SNP [dm3] 2L_4813102_SNP [dm6]	A	G	1.305e^-4	0.755	START_GAINED CG15629 UTR_5_PRIME CG15629	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3R	24817751	3R_24817751_SNP [dm3] 3R_28992029_SNP [dm6]	A	G	1.308e^-4	0.755	DOWNSTREAM wat INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
4	1215058	4_1215058_SNP [dm3] 4_1194432_SNP [dm6]	T	A	1.308e^-4	0.755	INTRON PIP4K	transposable element FlyBase
2L	4813386	2L_4813386_SNP [dm3] 2L_4813386_SNP [dm6]	T	G	1.309e^-4	0.755	NON_SYNONYMOUS_CODING CG15629
3R	26861326	3R_26861326_SNP [dm3] 3R_31035604_SNP [dm6]	G	C	1.309e^-4	0.755	NON_SYNONYMOUS_CODING CG33773
X	16731635	X_16731635_SNP [dm3] X_16837602_SNP [dm6]	T	A	1.311e^-4	0.755	DOWNSTREAM RSG7 INTERGENIC
3L	10612496	3L_10612496_SNP [dm3] 3L_10619396_SNP [dm6]	T	A	1.327e^-4	0.755	INTERGENIC
3L	11805402	3L_11805402_SNP [dm3] 3L_11812302_SNP [dm6]	G	A	1.330e^-4	0.755	SYNONYMOUS_CODING CG42255	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	20933054	3R_20933054_SNP [dm3] 3R_25107332_SNP [dm6]	A	G	1.337e^-4	0.755	SYNONYMOUS_CODING CG34027
3R	26017774	3R_26017774_SNP [dm3] 3R_30192052_SNP [dm6]	A	T	1.337e^-4	0.755	UPSTREAM CG9747 INTERGENIC
2R	12263711	2R_12263711_INS [dm3] 2R_16376206_INS [dm6]	T	TTTTTTGTTAAACTT...	1.342e^-4	0.755	INTERGENIC
3L	11478647	3L_11478647_SNP [dm3] 3L_11485547_SNP [dm6]	A	T	1.350e^-4	0.755	INTERGENIC
2L	17032218	2L_17032218_SNP [dm3] 2L_17032218_SNP [dm6]	G	A	1.353e^-4	0.755	INTERGENIC
2R	5953595	2R_5953595_SNP [dm3] 2R_10066090_SNP [dm6]	A	G	1.356e^-4	0.755	NON_SYNONYMOUS_CODING CG2292 UPSTREAM mRpL42	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	16376332	2R_16376332_SNP [dm3] 2R_20488827_SNP [dm6]	T	A	1.356e^-4	0.755	INTERGENIC
X	17300685	X_17300685_SNP [dm3] X_17406652_SNP [dm6]	A	T	1.357e^-4	0.755	INTERGENIC
2R	16306810	2R_16306810_SNP [dm3] 2R_20419305_SNP [dm6]	C	A	1.367e^-4	0.755	INTERGENIC
3L	14493053	3L_14493053_DEL [dm3] 3L_14499953_DEL [dm6]	GGAA	G	1.375e^-4	0.755	INTRON bbg
3L	14493059	3L_14493059_DEL [dm3] 3L_14499959_DEL [dm6]	ACTATATCGCAATTGCG...	T	1.375e^-4	0.755	INTRON bbg
2L	8152890	2L_8152890_SNP [dm3] 2L_8152890_SNP [dm6]	A	T	1.376e^-4	0.755	NON_SYNONYMOUS_CODING CG43394 INTRON CG8552	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	10629245	2R_10629245_SNP [dm3] 2R_14741740_SNP [dm6]	T	C	1.383e^-4	0.755	SYNONYMOUS_CODING CG12858	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	3947601	3L_3947601_SNP [dm3] 3L_3947601_SNP [dm6]	A	T	1.389e^-4	0.755	UPSTREAM CG10853 DOWNSTREAM CG14982 INTERGENIC
2L	18876836	2L_18876836_SNP [dm3] 2L_18876836_SNP [dm6]	T	C	1.390e^-4	0.755	INTRON tup	TF binding site BDTNP1_TFBS_da
3L	14493117	3L_14493117_SNP [dm3] 3L_14500017_SNP [dm6]	C	A	1.391e^-4	0.755	INTRON bbg
3R	19206640	3R_19206640_SNP [dm3] 3R_23380918_SNP [dm6]	G	C	1.394e^-4	0.755	SYNONYMOUS_CODING CG4393	TF binding site mE1_TFBS_chinmo
3L	11119366	3L_11119366_DEL [dm3] 3L_11126266_DEL [dm6]	GG	G	1.396e^-4	0.755	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	11809861	2R_11809861_DEL [dm3] 2R_15922356_DEL [dm6]	TTTATAACT	T	1.400e^-4	0.755	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
2R	7001156	2R_7001156_SNP [dm3] 2R_11113651_SNP [dm6]	A	T	1.403e^-4	0.755	INTRON luna
3R	11081474	3R_11081474_SNP [dm3] 3R_15255752_SNP [dm6]	T	A	1.404e^-4	0.755	UTR_3_PRIME CG42404
3R	7872980	3R_7872980_SNP [dm3] 3R_12047258_SNP [dm6]	G	A	1.406e^-4	0.755	DOWNSTREAM CG14739 INTERGENIC
3L	11478720	3L_11478720_SNP [dm3] 3L_11485620_SNP [dm6]	C	G	1.410e^-4	0.755	INTERGENIC
2R	9560399	2R_9560399_SNP [dm3] 2R_13672894_SNP [dm6]	G	A	1.411e^-4	0.755	UPSTREAM CR45031 INTRON fas
3L	12645877	3L_12645877_SNP [dm3] 3L_12652777_SNP [dm6]	A	G	1.412e^-4	0.755	INTRON CR43431	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	14527884	3L_14527884_SNP [dm3] 3L_14534784_SNP [dm6]	C	T	1.418e^-4	0.755	INTRON bbg	TF binding site mE1_TFBS_Trl
2L	1956640	2L_1956640_SNP [dm3] 2L_1956640_SNP [dm6]	A	G	1.424e^-4	0.755	INTRON erm	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
X	4538333	X_4538333_SNP [dm3] X_4644300_SNP [dm6]	A	T	1.429e^-4	0.755	UPSTREAM CG3081 DOWNSTREAM HLH4C INTRON CG3062
2R	11807885	2R_11807885_SNP [dm3] 2R_15920380_SNP [dm6]	G	T	1.430e^-4	0.755	INTRON sli	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	19073616	X_19073616_SNP [dm3] X_19179583_SNP [dm6]	A	G	1.432e^-4	0.755	SYNONYMOUS_CODING CG7556 UPSTREAM CG7453	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
2L	17494845	2L_17494845_SNP [dm3] 2L_17494845_SNP [dm6]	G	C	1.432e^-4	0.755	INTRON qua
X	16888280	X_16888280_SNP [dm3] X_16994247_SNP [dm6]	G	T	1.446e^-4	0.755	INTRON CG45002
3L	14493082	3L_14493082_SNP [dm3] 3L_14499982_SNP [dm6]	A	T	1.449e^-4	0.755	INTRON bbg
3R	14517767	3R_14517767_SNP [dm3] 3R_18692045_SNP [dm6]	T	G	1.454e^-4	0.755	INTRON Muc91C
3L	10543893	3L_10543893_SNP [dm3] 3L_10550793_SNP [dm6]	A	T	1.459e^-4	0.755	INTRON A2bp1
2R	16956262	2R_16956262_SNP [dm3] 2R_21068757_SNP [dm6]	A	C	1.460e^-4	0.755	SYNONYMOUS_CODING Cht9 EXON CR44703	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	26018002	3R_26018002_SNP [dm3] 3R_30192280_SNP [dm6]	T	A	1.460e^-4	0.755	INTERGENIC
3L	11119214	3L_11119214_SNP [dm3] 3L_11126114_SNP [dm6]	A	G	1.461e^-4	0.755	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	22161087	3L_22161087_SNP [dm3] 3L_22167987_SNP [dm6]	T	A	1.467e^-4	0.755	INTRON olf413
X	4538428	X_4538428_SNP [dm3] X_4644395_SNP [dm6]	A	T	1.479e^-4	0.755	UPSTREAM CG3081 DOWNSTREAM HLH4C INTRON CG3062
3L	14537785	3L_14537785_SNP [dm3] 3L_14544685_SNP [dm6]	A	C	1.483e^-4	0.755	INTRON CG9238
2R	20044400	2R_20044400_SNP [dm3] 2R_24156877_SNP [dm6]	C	G	1.484e^-4	0.755	DOWNSTREAM DnaJ-60 & 1 other INTRON Dat	TF binding site mE1_TFBS_chinmo
3L	15034318	3L_15034318_SNP [dm3] 3L_15041218_SNP [dm6]	T	A	1.484e^-4	0.755	DOWNSTREAM Rpn12R INTRON Sytbeta	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2L	4595970	2L_4595970_SNP [dm3] 2L_4595970_SNP [dm6]	G	A	1.493e^-4	0.755	UPSTREAM dp INTRON dp	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8019557	3L_8019557_SNP [dm3] 3L_8026457_SNP [dm6]	T	G	1.495e^-4	0.755	INTRON nmo
X	4376305	X_4376305_SNP [dm3] X_4482272_SNP [dm6]	T	C	1.499e^-4	0.755	SYNONYMOUS_CODING bi INTRON CR32773
2L	1958329	2L_1958329_SNP [dm3] 2L_1958329_SNP [dm6]	G	T	1.500e^-4	0.755	INTRON erm	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
2R	18117876	2R_18117876_SNP [dm3] 2R_22230371_SNP [dm6]	A	C	1.501e^-4	0.755	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	14499184	2R_14499184_SNP [dm3] 2R_18611679_SNP [dm6]	G	A	1.505e^-4	0.755	START_GAINED GEFmeso UTR_5_PRIME GEFmeso UTR_3_PRIME CG42697	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3R	14670003	3R_14670003_SNP [dm3] 3R_18844281_SNP [dm6]	C	T	1.507e^-4	0.755	INTRON CG18208
X	11267456	X_11267456_SNP [dm3] X_11373423_SNP [dm6]	T	C	1.508e^-4	0.755	INTRON dlg1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
4	1048713	4_1048713_SNP [dm3] 4_1028087_SNP [dm6]	C	T	1.511e^-4	0.755	UPSTREAM PlexA & 1 other DOWNSTREAM CG11077 INTRON CR44031	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Ubx
2R	12817978	2R_12817978_SNP [dm3] 2R_16930473_SNP [dm6]	G	T	1.511e^-4	0.755	INTRON Pkc53E
2L	10550810	2L_10550810_SNP [dm3] 2L_10550810_SNP [dm6]	T	C	1.512e^-4	0.755	INTRON Trim9
3R	26174116	3R_26174116_DEL [dm3] 3R_30348394_DEL [dm6]	CTATGATGGATCCC...	C	1.513e^-4	0.755	INTRON hdc
2L	8181785	2L_8181785_SNP [dm3] 2L_8181785_SNP [dm6]	A	G	1.520e^-4	0.756	DOWNSTREAM Piezo INTRON Piezo
3L	3786738	3L_3786738_SNP [dm3] 3L_3786738_SNP [dm6]	A	T	1.525e^-4	0.756	INTRON CG32264	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
2R	8908146	2R_8908146_SNP [dm3] 2R_13020641_SNP [dm6]	T	C	1.537e^-4	0.756	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
X	4538335	X_4538335_SNP [dm3] X_4644302_SNP [dm6]	A	T	1.542e^-4	0.756	UPSTREAM CG3081 DOWNSTREAM HLH4C INTRON CG3062
3L	7509263	3L_7509263_SNP [dm3] 3L_7516163_SNP [dm6]	C	G	1.560e^-4	0.756	SYNONYMOUS_CODING CG7546	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	17841653	2L_17841653_SNP [dm3] 2L_17841653_SNP [dm6]	T	C	1.560e^-4	0.756	INTRON CadN2
2R	12263714	2R_12263714_SNP [dm3] 2R_16376209_SNP [dm6]	C	T	1.560e^-4	0.756	INTERGENIC
2R	10537752	2R_10537752_SNP [dm3] 2R_14650247_SNP [dm6]	T	C	1.561e^-4	0.756	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	11117557	3L_11117557_SNP [dm3] 3L_11124457_SNP [dm6]	G	C	1.566e^-4	0.756	INTRON CG42575	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl
2R	17092812	2R_17092812_SNP [dm3] 2R_21205307_SNP [dm6]	C	T	1.571e^-4	0.756	SPLICE_SITE_REGION Glycogenin INTRON CG44245 & 1 other
3R	26007229	3R_26007229_DEL [dm3] 3R_30181507_DEL [dm6]	TTAT	T	1.571e^-4	0.756	DOWNSTREAM Bet5 INTERGENIC
3R	27254512	3R_27254512_SNP [dm3] 3R_31428790_SNP [dm6]	G	A	1.572e^-4	0.756	INTRON Gprk2
2R	7592526	2R_7592526_SNP [dm3] 2R_11705021_SNP [dm6]	A	G	1.574e^-4	0.756	EXON CR45377
2L	8255617	2L_8255617_SNP [dm3] 2L_8255617_SNP [dm6]	T	A	1.577e^-4	0.756	INTRON CG8086
2L	2582153	2L_2582153_SNP [dm3] 2L_2582153_SNP [dm6]	C	T	1.578e^-4	0.756	DOWNSTREAM Arpc5 INTRON Drp1	TF binding site mE1_TFBS_sens
3L	8012819	3L_8012819_SNP [dm3] 3L_8019719_SNP [dm6]	C	T	1.584e^-4	0.756	INTRON nmo
2L	8158005	2L_8158005_SNP [dm3] 2L_8158005_SNP [dm6]	C	T	1.590e^-4	0.756	INTRON CG8552 & 1 other	TF binding site BDTNP1_TFBS_twi
2L	2858620	2L_2858620_SNP [dm3] 2L_2858620_SNP [dm6]	A	G	1.597e^-4	0.756	INTRON CG2991	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	25206949	3R_25206949_INS [dm3] 3R_29381227_INS [dm6]	A	ACGCA	1.602e^-4	0.756	INTRON Ptp99A
4	530463	4_530463_DEL [dm3] 4_509837_DEL [dm6]	AC	A	1.612e^-4	0.756	INTRON zfh2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12311445	2L_12311445_INS [dm3] 2L_12311445_INS [dm6]	A	ACAA	1.614e^-4	0.756	UTR_3_PRIME aret DOWNSTREAM aret INTRON aret
3L	15629847	3L_15629847_SNP [dm3] 3L_15636747_SNP [dm6]	A	T	1.628e^-4	0.756	INTRON comm3
3R	20313892	3R_20313892_SNP [dm3] 3R_24488170_SNP [dm6]	A	G	1.628e^-4	0.756	UPSTREAM mir-1017 INTRON nAChRalpha2
2R	7591416	2R_7591416_SNP [dm3] 2R_11703911_SNP [dm6]	G	T	1.630e^-4	0.756	DOWNSTREAM CR45377 INTERGENIC
3L	9942840	3L_9942840_SNP [dm3] 3L_9949740_SNP [dm6]	A	T	1.634e^-4	0.756	INTRON CG34356
2L	3378989	2L_3378989_SNP [dm3] 2L_3378989_SNP [dm6]	A	G	1.634e^-4	0.756	DOWNSTREAM Ptpa INTERGENIC
2R	16996614	2R_16996614_SNP [dm3] 2R_21109109_SNP [dm6]	G	A	1.636e^-4	0.756	INTRON ktub
2L	12698977	2L_12698977_SNP [dm3] 2L_12698977_SNP [dm6]	C	G	1.641e^-4	0.756	UTR_3_PRIME CG17036 DOWNSTREAM CG17036 & 1 other	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10551826	2L_10551826_SNP [dm3] 2L_10551826_SNP [dm6]	C	T	1.642e^-4	0.756	INTRON Trim9	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	6440832	X_6440832_SNP [dm3] X_6546799_SNP [dm6]	G	A	1.645e^-4	0.756	INTRON CG34417	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	15046523	3L_15046523_SNP [dm3] 3L_15053423_SNP [dm6]	T	C	1.646e^-4	0.756	UPSTREAM CG13461 & 1 other DOWNSTREAM CG18649 INTRON Sytbeta
X	3484888	X_3484888_SNP [dm3] X_3590855_SNP [dm6]	C	G	1.649e^-4	0.756	INTRON AstA-R1
2L	15026954	2L_15026954_SNP [dm3] 2L_15026954_SNP [dm6]	T	C	1.659e^-4	0.756	NON_SYNONYMOUS_CODING CG33310 INTRON GABA-B-R1
3L	11860779	3L_11860779_SNP [dm3] 3L_11867679_SNP [dm6]	G	T	1.659e^-4	0.756	INTRON CG44837	TF binding site BDTNP1_TFBS_twi
3R	21932670	3R_21932670_SNP [dm3] 3R_26106948_SNP [dm6]	T	A	1.665e^-4	0.756	UTR_5_PRIME CG31324
X	3245122	X_3245122_SNP [dm3] X_3351089_SNP [dm6]	C	G	1.667e^-4	0.756	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19690553	2R_19690553_SNP [dm3] 2R_23803030_SNP [dm6]	G	A	1.674e^-4	0.756	UTR_3_PRIME CG30177
3R	24751801	3R_24751801_SNP [dm3] 3R_28926079_SNP [dm6]	C	T	1.674e^-4	0.756	DOWNSTREAM CG11828 INTRON CG14521
3L	8206639	3L_8206639_SNP [dm3] 3L_8213539_SNP [dm6]	G	C	1.681e^-4	0.756	UTR_3_PRIME CG8006	TF binding site mE1_TFBS_cad
2L	15075349	2L_15075349_DEL [dm3] 2L_15075349_DEL [dm6]	CCGTC	C	1.698e^-4	0.756	UTR_5_PRIME CG15270 DOWNSTREAM vas INTRON CG15270
2L	5348860	2L_5348860_SNP [dm3] 2L_5348860_SNP [dm6]	C	T	1.698e^-4	0.756	INTRON nompC
4	1122347	4_1122347_SNP [dm3] 4_1101721_SNP [dm6]	A	T	1.698e^-4	0.756	INTRON sv
2R	16158430	2R_16158430_SNP [dm3] 2R_20270925_SNP [dm6]	T	A	1.704e^-4	0.756	UTR_3_PRIME CG8908 DOWNSTREAM CG10444
2L	10892902	2L_10892902_SNP [dm3] 2L_10892902_SNP [dm6]	T	G	1.714e^-4	0.756	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_sens
2L	8181765	2L_8181765_SNP [dm3] 2L_8181765_SNP [dm6]	C	T	1.717e^-4	0.756	DOWNSTREAM Piezo INTRON Piezo
X	13399187	X_13399187_SNP [dm3] X_13505154_SNP [dm6]	T	C	1.718e^-4	0.756	INTRON Neto	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	17300532	X_17300532_DEL [dm3] X_17406499_DEL [dm6]	AGTAG	A	1.724e^-4	0.756	INTERGENIC
2L	2582166	2L_2582166_SNP [dm3] 2L_2582166_SNP [dm6]	C	G	1.726e^-4	0.756	SPLICE_SITE_REGION Drp1 DOWNSTREAM Arpc5 INTRON Drp1	TF binding site mE1_TFBS_sens
3L	11115451	3L_11115451_SNP [dm3] 3L_11122351_SNP [dm6]	A	G	1.731e^-4	0.756	NON_SYNONYMOUS_CODING Ufd1-like UPSTREAM CG42575 DOWNSTREAM mRpL2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2R	10226883	2R_10226883_SNP [dm3] 2R_14339378_SNP [dm6]	T	A	1.741e^-4	0.756	INTRON Shroom
X	7486711	X_7486711_SNP [dm3] X_7592678_SNP [dm6]	T	C	1.747e^-4	0.756	INTERGENIC	regulatory region REDfly_CRMs
2L	8184741	2L_8184741_SNP [dm3] 2L_8184741_SNP [dm6]	C	T	1.756e^-4	0.756	INTRON Piezo	TF binding site BDTNP1_TFBS_dl
2L	4865097	2L_4865097_SNP [dm3] 2L_4865097_SNP [dm6]	A	G	1.759e^-4	0.756	INTRON pog
X	6240887	X_6240887_SNP [dm3] X_6346854_SNP [dm6]	C	T	1.765e^-4	0.756	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
2R	14386443	2R_14386443_SNP [dm3] 2R_18498938_SNP [dm6]	A	G	1.774e^-4	0.756	UPSTREAM CG30116 INTERGENIC
2R	13185285	2R_13185285_SNP [dm3] 2R_17297780_SNP [dm6]	T	C	1.780e^-4	0.756	INTRON mbl
2R	11809936	2R_11809936_SNP [dm3] 2R_15922431_SNP [dm6]	T	C	1.780e^-4	0.756	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
3R	25248525	3R_25248525_SNP [dm3] 3R_29422803_SNP [dm6]	T	G	1.781e^-4	0.756	INTRON Ptp99A
2L	8171217	2L_8171217_SNP [dm3] 2L_8171217_SNP [dm6]	A	T	1.782e^-4	0.756	INTRON Piezo
2L	8171227	2L_8171227_SNP [dm3] 2L_8171227_SNP [dm6]	G	T	1.782e^-4	0.756	INTRON Piezo
3R	14512339	3R_14512339_INS [dm3] 3R_18686617_INS [dm6]	A	ACA	1.782e^-4	0.756	UTR_3_PRIME CG7708 DOWNSTREAM Muc91C
2L	2857526	2L_2857526_SNP [dm3] 2L_2857526_SNP [dm6]	G	T	1.784e^-4	0.756	UTR_5_PRIME CG2991 DOWNSTREAM RpS21	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	23537596	3R_23537596_SNP [dm3] 3R_27711874_SNP [dm6]	C	A	1.784e^-4	0.756	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	13616236	2L_13616236_SNP [dm3] 2L_13616236_SNP [dm6]	A	G	1.795e^-4	0.756	INTRON kuz
2R	18117881	2R_18117881_MNP [dm3] 2R_22230376_MNP [dm6]	AGG	CAC	1.799e^-4	0.756	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	12263651	2R_12263651_SNP [dm3] 2R_16376146_SNP [dm6]	T	A	1.804e^-4	0.756	INTERGENIC
2R	12263653	2R_12263653_SNP [dm3] 2R_16376148_SNP [dm6]	A	T	1.804e^-4	0.756	INTERGENIC
2R	19657807	2R_19657807_SNP [dm3] 2R_23770284_SNP [dm6]	G	A	1.815e^-4	0.756	INTRON CG9850	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	16802426	2R_16802426_SNP [dm3] 2R_20914921_SNP [dm6]	C	G	1.819e^-4	0.756	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
X	19348669	X_19348669_INS [dm3] X_19454636_INS [dm6]	C	CTAGCCAGGCCC...	1.819e^-4	0.756	INTRON kek5
2R	17086702	2R_17086702_SNP [dm3] 2R_21199197_SNP [dm6]	C	A	1.822e^-4	0.756	UTR_3_PRIME Lapsyn	TF binding site mE1_TFBS_cnc
3R	23661569	3R_23661569_SNP [dm3] 3R_27835847_SNP [dm6]	T	G	1.823e^-4	0.756	INTRON CG34353
2R	18915480	2R_18915480_SNP [dm3] 2R_23027957_SNP [dm6]	C	T	1.824e^-4	0.756	INTRON twi & 1 other	TF binding site mE1_TFBS_inv
3R	26034983	3R_26034983_SNP [dm3] 3R_30209261_SNP [dm6]	C	T	1.826e^-4	0.756	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	8054793	3L_8054793_SNP [dm3] 3L_8061693_SNP [dm6]	C	T	1.827e^-4	0.756	UPSTREAM tRNA:CR32360 INTERGENIC
3R	11074080	3R_11074080_SNP [dm3] 3R_15248358_SNP [dm6]	A	G	1.835e^-4	0.756	SYNONYMOUS_CODING CG6499	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11118224	3L_11118224_SNP [dm3] 3L_11125124_SNP [dm6]	G	C	1.835e^-4	0.756	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	17560567	3R_17560567_SNP [dm3] 3R_21734845_SNP [dm6]	C	T	1.852e^-4	0.756	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	10398228	3L_10398228_SNP [dm3] 3L_10405128_SNP [dm6]	T	C	1.862e^-4	0.756	INTERGENIC
2R	6041505	2R_6041505_SNP [dm3] 2R_10154000_SNP [dm6]	T	G	1.868e^-4	0.756	INTRON CR45133 & 1 other
X	17383065	X_17383065_SNP [dm3] X_17489032_SNP [dm6]	A	C	1.869e^-4	0.756	UTR_5_PRIME CG43658 INTRON CG43658
2L	14792716	2L_14792716_SNP [dm3] 2L_14792716_SNP [dm6]	C	T	1.870e^-4	0.756	INTERGENIC
X	5607579	X_5607579_DEL [dm3] X_5713546_DEL [dm6]	CGCTCATGCCGCA...	C	1.870e^-4	0.756	UPSTREAM CG33080 INTRON CG33080
3L	2861817	3L_2861817_SNP [dm3] 3L_2861817_SNP [dm6]	C	G	1.883e^-4	0.756	INTRON CG43444
4	1023265	4_1023265_SNP [dm3] 4_1002639_SNP [dm6]	T	C	1.885e^-4	0.756	INTRON toy
X	16900493	X_16900493_SNP [dm3] X_17006460_SNP [dm6]	C	T	1.889e^-4	0.756	INTRON CG45002
X	7487011	X_7487011_SNP [dm3] X_7592978_SNP [dm6]	G	A	1.894e^-4	0.756	INTERGENIC	regulatory region REDfly_CRMs
3R	26018388	3R_26018388_SNP [dm3] 3R_30192666_SNP [dm6]	T	C	1.898e^-4	0.756	INTERGENIC
3L	13918911	3L_13918911_SNP [dm3] 3L_13925811_SNP [dm6]	G	A	1.899e^-4	0.756	UPSTREAM Rgl DOWNSTREAM CG8833 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	24051986	3R_24051986_SNP [dm3] 3R_28226264_SNP [dm6]	C	T	1.900e^-4	0.756	INTRON CG34354	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15662800	2R_15662800_SNP [dm3] 2R_19775295_SNP [dm6]	G	C	1.902e^-4	0.756	INTERGENIC
3R	26035012	3R_26035012_INS [dm3] 3R_30209290_INS [dm6]	T	TTT	1.903e^-4	0.756	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	11117555	3L_11117555_SNP [dm3] 3L_11124455_SNP [dm6]	T	A	1.905e^-4	0.756	INTRON CG42575	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl
2L	2857039	2L_2857039_SNP [dm3] 2L_2857039_SNP [dm6]	A	G	1.909e^-4	0.756	UPSTREAM CG2991 DOWNSTREAM RpS21 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Ubx
2R	16283768	2R_16283768_SNP [dm3] 2R_20396263_SNP [dm6]	C	T	1.910e^-4	0.756	INTERGENIC
2R	11805165	2R_11805165_SNP [dm3] 2R_15917660_SNP [dm6]	A	G	1.913e^-4	0.756	DOWNSTREAM CR44373 INTRON sli	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	21518257	3R_21518257_SNP [dm3] 3R_25692535_SNP [dm6]	T	G	1.915e^-4	0.756	INTERGENIC
3L	14525057	3L_14525057_DEL [dm3] 3L_14531957_DEL [dm6]	TT	T	1.918e^-4	0.756	INTRON bbg
2R	16996572	2R_16996572_SNP [dm3] 2R_21109067_SNP [dm6]	C	T	1.925e^-4	0.756	INTRON ktub
4	1034728	4_1034728_SNP [dm3] 4_1014102_SNP [dm6]	G	A	1.930e^-4	0.756	INTRON PlexA
4	603065	4_603065_SNP [dm3] 4_582439_SNP [dm6]	A	C	1.939e^-4	0.756	UPSTREAM CG1909 INTERGENIC	transposable element FlyBase
2R	10239409	2R_10239409_INS [dm3] 2R_14351904_INS [dm6]	C	TT	1.944e^-4	0.756	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_kn
2R	7167451	2R_7167451_SNP [dm3] 2R_11279946_SNP [dm6]	G	T	1.945e^-4	0.756	SYNONYMOUS_CODING Vhl UPSTREAM CG9067 DOWNSTREAM CG9062	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	5132571	2L_5132571_SNP [dm3] 2L_5132571_SNP [dm6]	G	A	1.952e^-4	0.756	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_cad
2L	2856240	2L_2856240_SNP [dm3] 2L_2856240_SNP [dm6]	C	A	1.963e^-4	0.756	SPLICE_SITE_REGION RpS21 UTR_5_PRIME RpS21 UPSTREAM CG3104 & 1 other INTRON RpS21	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_sens
2R	7587139	2R_7587139_SNP [dm3] 2R_11699634_SNP [dm6]	A	C	1.965e^-4	0.756	EXON Ir48a	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	7587140	2R_7587140_SNP [dm3] 2R_11699635_SNP [dm6]	C	A	1.965e^-4	0.756	EXON Ir48a	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	8181777	2L_8181777_SNP [dm3] 2L_8181777_SNP [dm6]	A	G	1.973e^-4	0.756	DOWNSTREAM Piezo INTRON Piezo
3L	2694837	3L_2694837_SNP [dm3] 3L_2694837_SNP [dm6]	G	A	1.980e^-4	0.756	INTRON Fife
3L	10543829	3L_10543829_SNP [dm3] 3L_10550729_SNP [dm6]	G	T	1.981e^-4	0.756	INTRON A2bp1
X	6642120	X_6642120_SNP [dm3] X_6748087_SNP [dm6]	A	G	1.988e^-4	0.756	UPSTREAM CR44964 INTRON CG14439	TF binding site BDTNP1_TFBS_dl
2L	8172249	2L_8172249_SNP [dm3] 2L_8172249_SNP [dm6]	T	C	1.992e^-4	0.756	INTRON Piezo
2R	7030512	2R_7030512_SNP [dm3] 2R_11143007_SNP [dm6]	C	G	1.999e^-4	0.756	INTRON CG13229
2R	952899	2R_952899_SNP [dm3] 2R_5065394_SNP [dm6]	A	G	1.999e^-4	0.756	UTR_3_PRIME TpnC41C DOWNSTREAM TpnC41C
X	15148172	X_15148172_SNP [dm3] X_15254139_SNP [dm6]	A	T	2.002e^-4	0.756	INTERGENIC
2L	10110752	2L_10110752_SNP [dm3] 2L_10110752_SNP [dm6]	A	G	2.014e^-4	0.756	INTRON CG44153 & 1 other
3R	23723963	3R_23723963_SNP [dm3] 3R_27898241_SNP [dm6]	T	C	2.017e^-4	0.756	INTRON CG34353
2L	8171219	2L_8171219_SNP [dm3] 2L_8171219_SNP [dm6]	G	A	2.028e^-4	0.756	INTRON Piezo
3R	26017804	3R_26017804_SNP [dm3] 3R_30192082_SNP [dm6]	C	G	2.032e^-4	0.756	UPSTREAM CG9747 INTERGENIC
3L	8599532	3L_8599532_SNP [dm3] 3L_8606432_SNP [dm6]	G	A	2.034e^-4	0.756	INTRON CG6282
2R	12263642	2R_12263642_SNP [dm3] 2R_16376137_SNP [dm6]	G	T	2.034e^-4	0.756	INTERGENIC
2R	9179695	2R_9179695_INS [dm3] 2R_13292190_INS [dm6]	G	GATGCTG	2.038e^-4	0.756	INTRON Dh31-R
2R	19655743	2R_19655743_SNP [dm3] 2R_23768220_SNP [dm6]	G	C	2.043e^-4	0.756	SYNONYMOUS_CODING CG9850
3R	9898511	3R_9898511_SNP [dm3] 3R_14072789_SNP [dm6]	G	A	2.050e^-4	0.756	INTRON foxo
3R	6255457	3R_6255457_SNP [dm3] 3R_10429735_SNP [dm6]	T	A	2.052e^-4	0.756	INTERGENIC
3R	21788708	3R_21788708_SNP [dm3] 3R_25962986_SNP [dm6]	T	C	2.054e^-4	0.756	INTRON boss
2R	10001508	2R_10001508_SNP [dm3] 2R_14114003_SNP [dm6]	C	T	2.057e^-4	0.756	INTRON Prosap	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
3L	1364996	3L_1364996_DEL [dm3] 3L_1364996_DEL [dm6]	TCTTATTATATGGAAT...	T	2.064e^-4	0.756	INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	13470189	X_13470189_DEL [dm3] X_13576156_DEL [dm6]	AA	A	2.070e^-4	0.756	UTR_5_PRIME Tango13 UPSTREAM Tango13
2R	1692515	2R_1692515_SNP [dm3] 2R_5805010_SNP [dm6]	G	T	2.072e^-4	0.756	START_GAINED dpr12 UTR_5_PRIME dpr12	TF binding site mE1_TFBS_cad
3L	4296299	3L_4296299_SNP [dm3] 3L_4296299_SNP [dm6]	T	A	2.072e^-4	0.756	INTRON dyl	TF binding site mE1_TFBS_cad
3R	20375355	3R_20375355_SNP [dm3] 3R_24549633_SNP [dm6]	A	G	2.076e^-4	0.756	INTRON Esyt2	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
3L	11856471	3L_11856471_SNP [dm3] 3L_11863371_SNP [dm6]	T	C	2.077e^-4	0.756	UTR_5_PRIME CG44837 INTRON CG44837	TF binding site mE1_TFBS_cad
X	12168370	X_12168370_DEL [dm3] X_12274337_DEL [dm6]	GTAG	G	2.080e^-4	0.756	UPSTREAM CG45603 INTRON Ten-a
2L	12698575	2L_12698575_SNP [dm3] 2L_12698575_SNP [dm6]	G	A	2.084e^-4	0.756	SYNONYMOUS_CODING PICK1 DOWNSTREAM CG17036	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10551968	2L_10551968_DEL [dm3] 2L_10551968_DEL [dm6]	TCGCCGCTACTT...	T	2.088e^-4	0.756	INTRON Trim9	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	10239438	2R_10239438_SNP [dm3] 2R_14351933_SNP [dm6]	A	G	2.089e^-4	0.756	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
X	6661213	X_6661213_SNP [dm3] X_6767180_SNP [dm6]	C	T	2.089e^-4	0.756	SPLICE_SITE_REGION CG14438 INTRON CG14438	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	4376227	X_4376227_SNP [dm3] X_4482194_SNP [dm6]	T	C	2.092e^-4	0.756	SYNONYMOUS_CODING bi INTRON CR32773
X	19074008	X_19074008_SNP [dm3] X_19179975_SNP [dm6]	A	C	2.095e^-4	0.756	UPSTREAM CG7453 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Ubx
X	9054355	X_9054355_SNP [dm3] X_9160322_SNP [dm6]	T	G	2.095e^-4	0.756	UTR_3_PRIME Zpr1 UPSTREAM CG9034 DOWNSTREAM Dip1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA transposable element FlyBase
2L	8172238	2L_8172238_SNP [dm3] 2L_8172238_SNP [dm6]	T	A	2.095e^-4	0.756	INTRON Piezo
2R	4301411	2R_4301411_SNP [dm3] 2R_8413906_SNP [dm6]	C	G	2.102e^-4	0.756	INTERGENIC
3R	4676109	3R_4676109_SNP [dm3] 3R_8850387_SNP [dm6]	A	G	2.102e^-4	0.756	INTRON pyd	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	9899334	3R_9899334_SNP [dm3] 3R_14073612_SNP [dm6]	T	A	2.103e^-4	0.756	INTRON foxo
3R	16227635	3R_16227635_SNP [dm3] 3R_20401913_SNP [dm6]	T	C	2.112e^-4	0.756	INTRON Gfrl
3R	17167400	3R_17167400_SNP [dm3] 3R_21341678_SNP [dm6]	G	T	2.113e^-4	0.756	INTRON CG16791	TF binding site BDTNP1_TFBS_da
3L	9319580	3L_9319580_SNP [dm3] 3L_9326480_SNP [dm6]	C	T	2.116e^-4	0.756	INTERGENIC
3L	12650082	3L_12650082_SNP [dm3] 3L_12656982_SNP [dm6]	T	G	2.119e^-4	0.756	INTERGENIC
3L	12103711	3L_12103711_SNP [dm3] 3L_12110611_SNP [dm6]	T	G	2.122e^-4	0.756	INTERGENIC
3R	17563873	3R_17563873_SNP [dm3] 3R_21738151_SNP [dm6]	C	A	2.131e^-4	0.758	UPSTREAM CG42870 DOWNSTREAM CG34034 INTERGENIC
3R	7710536	3R_7710536_SNP [dm3] 3R_11884814_SNP [dm6]	G	T	2.133e^-4	0.758	SYNONYMOUS_CODING mthl5 INTRON CG31368
3R	26174150	3R_26174150_SNP [dm3] 3R_30348428_SNP [dm6]	C	T	2.140e^-4	0.758	INTRON hdc
2L	4867243	2L_4867243_SNP [dm3] 2L_4867243_SNP [dm6]	G	C	2.142e^-4	0.758	INTRON pog
X	4538423	X_4538423_SNP [dm3] X_4644390_SNP [dm6]	A	G	2.154e^-4	0.761	UPSTREAM CG3081 DOWNSTREAM HLH4C INTRON CG3062
X	18359816	X_18359816_SNP [dm3] X_18465783_SNP [dm6]	C	T	2.159e^-4	0.761	INTRON CG32547	TF binding site mE1_TFBS_chinmo
3R	18743445	3R_18743445_SNP [dm3] 3R_22917723_SNP [dm6]	C	T	2.167e^-4	0.762	INTRON klg
4	249973	4_249973_SNP [dm3] 4_229347_SNP [dm6]	A	G	2.173e^-4	0.763	NON_SYNONYMOUS_CODING yellow-h
3R	14402347	3R_14402347_INS [dm3] 3R_18576625_INS [dm6]	G	GTTTG	2.180e^-4	0.764	INTRON CG7694 & 1 other
2R	7165331	2R_7165331_SNP [dm3] 2R_11277826_SNP [dm6]	A	T	2.191e^-4	0.765	DOWNSTREAM Cpr47Eg INTERGENIC
X	6240831	X_6240831_SNP [dm3] X_6346798_SNP [dm6]	T	C	2.198e^-4	0.765	UPSTREAM CG3847 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z
2L	9258585	2L_9258585_SNP [dm3] 2L_9258585_SNP [dm6]	G	A	2.208e^-4	0.765	INTRON Ggamma30A
2L	10553054	2L_10553054_SNP [dm3] 2L_10553054_SNP [dm6]	G	A	2.209e^-4	0.765	INTRON Trim9	TF binding site mE1_TFBS_HSA
3L	11119221	3L_11119221_SNP [dm3] 3L_11126121_SNP [dm6]	T	A	2.214e^-4	0.765	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
X	11864330	X_11864330_SNP [dm3] X_11970297_SNP [dm6]	A	T	2.218e^-4	0.765	INTRON cac
2R	9348746	2R_9348746_SNP [dm3] 2R_13461241_SNP [dm6]	T	C	2.222e^-4	0.765	INTRON arr
2L	12311464	2L_12311464_SNP [dm3] 2L_12311464_SNP [dm6]	C	G	2.224e^-4	0.765	UTR_3_PRIME aret DOWNSTREAM aret INTRON aret
3L	15543927	3L_15543927_DEL [dm3] 3L_15550827_DEL [dm6]	CTCAC	C	2.225e^-4	0.765	INTRON CrebA	TF binding site mE1_TFBS_cad
2L	12340567	2L_12340567_SNP [dm3] 2L_12340567_SNP [dm6]	T	C	2.240e^-4	0.765	INTERGENIC
2R	6279590	2R_6279590_SNP [dm3] 2R_10392085_SNP [dm6]	C	G	2.242e^-4	0.765	INTRON CG42732
3L	15046527	3L_15046527_SNP [dm3] 3L_15053427_SNP [dm6]	G	T	2.244e^-4	0.765	UPSTREAM CG13461 & 1 other DOWNSTREAM CG18649 INTRON Sytbeta
2L	10550830	2L_10550830_SNP [dm3] 2L_10550830_SNP [dm6]	G	A	2.244e^-4	0.765	INTRON Trim9
2L	21947433	2L_21947433_SNP [dm3] 2L_21947433_SNP [dm6]	A	C	2.245e^-4	0.765	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	19152143	2R_19152143_SNP [dm3] 2R_23264620_SNP [dm6]	G	C	2.245e^-4	0.765	SYNONYMOUS_CODING CG12782	TF binding site mE1_TFBS_chinmo
2R	19680053	2R_19680053_SNP [dm3] 2R_23792530_SNP [dm6]	C	T	2.247e^-4	0.765	INTRON CG9850	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3L	2144042	3L_2144042_SNP [dm3] 3L_2144042_SNP [dm6]	T	C	2.254e^-4	0.766	INTRON zormin
3R	13721836	3R_13721836_SNP [dm3] 3R_17896114_SNP [dm6]	A	G	2.264e^-4	0.766	INTRON Rim	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	10147417	2L_10147417_SNP [dm3] 2L_10147417_SNP [dm6]	A	C	2.284e^-4	0.766	INTRON CG44153 & 1 other	TF binding site mE1_TFBS_cad
2L	18731011	2L_18731011_INS [dm3] 2L_18731011_INS [dm6]	G	GTTG	2.288e^-4	0.766	UTR_5_PRIME CG10348
3R	26035044	3R_26035044_SNP [dm3] 3R_30209322_SNP [dm6]	T	A	2.296e^-4	0.766	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	14528417	3L_14528417_SNP [dm3] 3L_14535317_SNP [dm6]	A	T	2.296e^-4	0.766	INTRON bbg
3R	5388500	3R_5388500_SNP [dm3] 3R_9562778_SNP [dm6]	T	C	2.310e^-4	0.766	INTRON CG9393	TF binding site mE1_TFBS_inv
2R	16157381	2R_16157381_SNP [dm3] 2R_20269876_SNP [dm6]	A	C	2.312e^-4	0.766	SYNONYMOUS_CODING CG8908	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	11851881	2R_11851881_SNP [dm3] 2R_15964376_SNP [dm6]	G	A	2.316e^-4	0.766	SYNONYMOUS_CODING Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	11853168	2R_11853168_SNP [dm3] 2R_15965663_SNP [dm6]	C	A	2.316e^-4	0.766	INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	4701112	3L_4701112_SNP [dm3] 3L_4701112_SNP [dm6]	T	C	2.321e^-4	0.766	INTRON RhoGEF64C
2L	10553111	2L_10553111_SNP [dm3] 2L_10553111_SNP [dm6]	T	C	2.322e^-4	0.766	INTRON Trim9	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
2R	11809910	2R_11809910_SNP [dm3] 2R_15922405_SNP [dm6]	C	T	2.322e^-4	0.766	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
X	6642182	X_6642182_DEL [dm3] X_6748149_DEL [dm6]	AA	A	2.323e^-4	0.766	UPSTREAM CR44964 INTRON CG14439
3R	4677789	3R_4677789_SNP [dm3] 3R_8852067_SNP [dm6]	T	G	2.324e^-4	0.766	INTRON pyd
X	21353413	X_21353413_SNP [dm3] X_21482386_SNP [dm6]	A	G	2.330e^-4	0.766	DOWNSTREAM CR45511 INTERGENIC
2L	4865096	2L_4865096_SNP [dm3] 2L_4865096_SNP [dm6]	C	T	2.331e^-4	0.766	INTRON pog
2L	1218870	2L_1218870_SNP [dm3] 2L_1218870_SNP [dm6]	G	A	2.335e^-4	0.766	UPSTREAM CG42329 INTERGENIC	TF binding site mE1_TFBS_cad
2L	5133369	2L_5133369_SNP [dm3] 2L_5133369_SNP [dm6]	C	T	2.338e^-4	0.766	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_cad
2R	7442284	2R_7442284_SNP [dm3] 2R_11554779_SNP [dm6]	G	A	2.344e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2L	10520347	2L_10520347_SNP [dm3] 2L_10520347_SNP [dm6]	C	T	2.352e^-4	0.766	INTERGENIC
2R	16611482	2R_16611482_SNP [dm3] 2R_20723977_SNP [dm6]	C	T	2.354e^-4	0.766	DOWNSTREAM CR44660 INTRON dpr
3R	5205881	3R_5205881_SNP [dm3] 3R_9380159_SNP [dm6]	A	T	2.357e^-4	0.766	INTRON FER	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	10239431	2R_10239431_SNP [dm3] 2R_14351926_SNP [dm6]	T	A	2.358e^-4	0.766	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
X	7486993	X_7486993_SNP [dm3] X_7592960_SNP [dm6]	C	T	2.362e^-4	0.766	INTERGENIC	regulatory region REDfly_CRMs
4	997449	4_997449_SNP [dm3] 4_976823_SNP [dm6]	T	G	2.363e^-4	0.766	UPSTREAM fuss INTRON fuss EXON sphinx	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	26035006	3R_26035006_INS [dm3] 3R_30209284_INS [dm6]	A	AG	2.363e^-4	0.766	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
X	10313530	X_10313530_MNP [dm3] X_10419497_MNP [dm6]	ACA	GTT	2.373e^-4	0.766	INTRON CG32683
2R	17088140	2R_17088140_SNP [dm3] 2R_21200635_SNP [dm6]	T	A	2.380e^-4	0.766	UTR_5_PRIME Glycogenin & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	10398246	3L_10398246_SNP [dm3] 3L_10405146_SNP [dm6]	T	C	2.385e^-4	0.766	INTERGENIC
3L	11005868	3L_11005868_SNP [dm3] 3L_11012768_SNP [dm6]	C	T	2.394e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	15839063	3R_15839063_SNP [dm3] 3R_20013341_SNP [dm6]	T	A	2.398e^-4	0.766	UPSTREAM CG4836 INTRON CG17190
2R	17089871	2R_17089871_SNP [dm3] 2R_21202366_SNP [dm6]	A	T	2.401e^-4	0.766	UPSTREAM Glycogenin INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	5308988	2L_5308988_SNP [dm3] 2L_5308988_SNP [dm6]	G	C	2.402e^-4	0.766	SYNONYMOUS_CODING vri	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	17089819	2R_17089819_SNP [dm3] 2R_21202314_SNP [dm6]	A	G	2.406e^-4	0.766	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	10553169	2L_10553169_SNP [dm3] 2L_10553169_SNP [dm6]	G	T	2.409e^-4	0.766	INTRON Trim9	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
2L	8185409	2L_8185409_SNP [dm3] 2L_8185409_SNP [dm6]	G	A	2.416e^-4	0.766	INTRON Piezo	TF binding site BDTNP1_TFBS_dl
3R	26096081	3R_26096081_SNP [dm3] 3R_30270359_SNP [dm6]	A	C	2.419e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	11810316	3L_11810316_SNP [dm3] 3L_11817216_SNP [dm6]	T	G	2.421e^-4	0.766	SYNONYMOUS_CODING CG5946 UTR_3_PRIME CG5946 DOWNSTREAM CG14130
3L	10874920	3L_10874920_SNP [dm3] 3L_10881820_SNP [dm6]	G	A	2.421e^-4	0.766	SYNONYMOUS_CODING CG6409
3R	20319245	3R_20319245_DEL [dm3] 3R_24493523_DEL [dm6]	TT	T	2.423e^-4	0.766	INTERGENIC
2L	5309403	2L_5309403_SNP [dm3] 2L_5309403_SNP [dm6]	C	T	2.425e^-4	0.766	SYNONYMOUS_CODING vri	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	4701038	3L_4701038_SNP [dm3] 3L_4701038_SNP [dm6]	C	A	2.437e^-4	0.766	INTRON RhoGEF64C
3R	26930988	3R_26930988_SNP [dm3] 3R_31105266_SNP [dm6]	T	C	2.439e^-4	0.766	INTERGENIC
2L	1343223	2L_1343223_SNP [dm3] 2L_1343223_SNP [dm6]	G	T	2.445e^-4	0.766	DOWNSTREAM CG33922 INTERGENIC
2L	14937377	2L_14937377_SNP [dm3] 2L_14937377_SNP [dm6]	T	G	2.453e^-4	0.766	INTRON CG42313
X	19971726	X_19971726_SNP [dm3] X_20077693_SNP [dm6]	A	G	2.459e^-4	0.766	INTERGENIC
2R	17872338	2R_17872338_SNP [dm3] 2R_21984833_SNP [dm6]	T	C	2.462e^-4	0.766	DOWNSTREAM CG30401 INTERGENIC
2L	8181905	2L_8181905_SNP [dm3] 2L_8181905_SNP [dm6]	C	T	2.470e^-4	0.766	DOWNSTREAM Piezo INTRON Piezo
3R	21030869	3R_21030869_SNP [dm3] 3R_25205147_SNP [dm6]	C	T	2.472e^-4	0.766	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
2R	6354824	2R_6354824_SNP [dm3] 2R_10467319_SNP [dm6]	G	A	2.475e^-4	0.766	SYNONYMOUS_CODING Caf1-105	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	27254536	3R_27254536_SNP [dm3] 3R_31428814_SNP [dm6]	T	G	2.476e^-4	0.766	INTRON Gprk2
3L	15252621	3L_15252621_SNP [dm3] 3L_15259521_SNP [dm6]	T	G	2.481e^-4	0.766	INTERGENIC	TF binding site mE1_TFBS_inv mE1_TFBS_sens
3L	10968997	3L_10968997_SNP [dm3] 3L_10975897_SNP [dm6]	C	T	2.486e^-4	0.766	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
4	799662	4_799662_SNP [dm3] 4_779036_SNP [dm6]	G	T	2.486e^-4	0.766	NON_SYNONYMOUS_CODING MED26
4	868705	4_868705_SNP [dm3] 4_848079_SNP [dm6]	A	T	2.486e^-4	0.766	INTERGENIC	transposable element FlyBase
X	6641361	X_6641361_SNP [dm3] X_6747328_SNP [dm6]	C	T	2.490e^-4	0.766	UPSTREAM CG14439 DOWNSTREAM CR44895 EXON CR44964	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
X	10251852	X_10251852_SNP [dm3] X_10357819_SNP [dm6]	A	G	2.499e^-4	0.766	INTRON l_1_G0289
X	13402360	X_13402360_SNP [dm3] X_13508327_SNP [dm6]	C	T	2.501e^-4	0.766	INTRON Neto
3L	14527848	3L_14527848_SNP [dm3] 3L_14534748_SNP [dm6]	G	A	2.501e^-4	0.766	INTRON bbg	TF binding site mE1_TFBS_Trl
2L	7107395	2L_7107395_SNP [dm3] 2L_7107395_SNP [dm6]	G	A	2.505e^-4	0.766	INTRON Pvf3
2R	16993283	2R_16993283_SNP [dm3] 2R_21105778_SNP [dm6]	A	T	2.532e^-4	0.766	INTRON ktub
4	893477	4_893477_SNP [dm3] 4_872851_SNP [dm6]	T	C	2.535e^-4	0.766	INTRON unc-13
3R	26038282	3R_26038282_SNP [dm3] 3R_30212560_SNP [dm6]	G	T	2.538e^-4	0.766	UTR_3_PRIME CecA2 UPSTREAM Cec2 DOWNSTREAM Cec-Psi1 & 1 other
X	21353396	X_21353396_SNP [dm3] X_21482369_SNP [dm6]	T	C	2.553e^-4	0.766	DOWNSTREAM CR45511 INTERGENIC
2R	11809915	2R_11809915_SNP [dm3] 2R_15922410_SNP [dm6]	A	T	2.561e^-4	0.766	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
3L	17477864	3L_17477864_SNP [dm3] 3L_17484764_SNP [dm6]	A	C	2.570e^-4	0.766	INTRON CG6333
X	17906880	X_17906880_SNP [dm3] X_18012847_SNP [dm6]	G	T	2.574e^-4	0.766	INTRON Sh
2R	11049033	2R_11049033_SNP [dm3] 2R_15161528_SNP [dm6]	C	A	2.576e^-4	0.766	INTRON igl
3L	11115798	3L_11115798_SNP [dm3] 3L_11122698_SNP [dm6]	G	A	2.581e^-4	0.766	SYNONYMOUS_CODING Ufd1-like UPSTREAM CG42575 DOWNSTREAM mRpL2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_sens
2R	16528769	2R_16528769_SNP [dm3] 2R_20641264_SNP [dm6]	C	T	2.587e^-4	0.766	SYNONYMOUS_CODING maf-S UPSTREAM rig & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_sens mE1_TFBS_Ubx
2L	11421836	2L_11421836_SNP [dm3] 2L_11421836_SNP [dm6]	T	C	2.589e^-4	0.766	INTERGENIC
2L	10530281	2L_10530281_SNP [dm3] 2L_10530281_SNP [dm6]	G	A	2.593e^-4	0.766	INTRON Lip4
2L	8189829	2L_8189829_SNP [dm3] 2L_8189829_SNP [dm6]	T	C	2.604e^-4	0.766	UTR_3_PRIME Piezo DOWNSTREAM CG34134 & 1 other
3L	13742748	3L_13742748_SNP [dm3] 3L_13749648_SNP [dm6]	T	G	2.608e^-4	0.766	INTRON bru-3	TF binding site mE1_TFBS_HSA
2R	10666546	2R_10666546_SNP [dm3] 2R_14779041_SNP [dm6]	T	C	2.621e^-4	0.766	INTRON kn
3R	24825558	3R_24825558_SNP [dm3] 3R_28999836_SNP [dm6]	C	A	2.623e^-4	0.766	INTRON wat
3L	9942955	3L_9942955_SNP [dm3] 3L_9949855_SNP [dm6]	A	G	2.624e^-4	0.766	INTRON CG34356
3R	21178074	3R_21178074_SNP [dm3] 3R_25352352_SNP [dm6]	G	T	2.629e^-4	0.766	DOWNSTREAM Fur1 INTRON Fur1
2R	18916765	2R_18916765_MNP [dm3] 2R_23029242_MNP [dm6]	AAGA	TTTT	2.631e^-4	0.766	INTRON twi & 1 other
3L	8593000	3L_8593000_SNP [dm3] 3L_8599900_SNP [dm6]	A	G	2.634e^-4	0.766	SYNONYMOUS_CODING Nelf-E DOWNSTREAM CG43078
X	19111902	X_19111902_SNP [dm3] X_19217869_SNP [dm6]	T	C	2.636e^-4	0.766	INTERGENIC
3L	12340923	3L_12340923_SNP [dm3] 3L_12347823_SNP [dm6]	C	T	2.641e^-4	0.766	NON_SYNONYMOUS_CODING CrzR
X	12353098	X_12353098_SNP [dm3] X_12459065_SNP [dm6]	T	C	2.645e^-4	0.766	DOWNSTREAM Rab40 INTERGENIC
2R	15107370	2R_15107370_SNP [dm3] 2R_19219865_SNP [dm6]	C	T	2.648e^-4	0.766	INTRON hppy
2R	16875975	2R_16875975_SNP [dm3] 2R_20988470_SNP [dm6]	A	G	2.649e^-4	0.766	SYNONYMOUS_CODING CG3216	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	22107420	3L_22107420_SNP [dm3] 3L_22114320_SNP [dm6]	C	A	2.650e^-4	0.766	INTERGENIC
2L	8584509	2L_8584509_SNP [dm3] 2L_8584509_SNP [dm6]	C	A	2.652e^-4	0.766	INTRON Sema-1a
3L	10612501	3L_10612501_SNP [dm3] 3L_10619401_SNP [dm6]	T	C	2.658e^-4	0.766	INTERGENIC
2R	7963994	2R_7963994_SNP [dm3] 2R_12076489_SNP [dm6]	G	C	2.658e^-4	0.766	INTRON CG8888
3L	3563271	3L_3563271_SNP [dm3] 3L_3563271_SNP [dm6]	A	G	2.672e^-4	0.766	INTRON Eip63E
3L	10648627	3L_10648627_SNP [dm3] 3L_10655527_SNP [dm6]	A	T	2.674e^-4	0.766	INTRON CG32066
X	4572326	X_4572326_DEL [dm3] X_4678293_DEL [dm6]	CC	C	2.674e^-4	0.766	UPSTREAM rap INTRON rap	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	8583367	2L_8583367_SNP [dm3] 2L_8583367_SNP [dm6]	A	C	2.675e^-4	0.766	INTRON Sema-1a
2R	12554308	2R_12554308_SNP [dm3] 2R_16666803_SNP [dm6]	G	A	2.678e^-4	0.766	INTRON Picot
2R	12554335	2R_12554335_SNP [dm3] 2R_16666830_SNP [dm6]	A	G	2.678e^-4	0.766	INTRON Picot
3R	26043254	3R_26043254_SNP [dm3] 3R_30217532_SNP [dm6]	T	A	2.679e^-4	0.766	DOWNSTREAM CecC INTERGENIC
2L	1368773	2L_1368773_SNP [dm3] 2L_1368773_SNP [dm6]	A	G	2.682e^-4	0.766	NON_SYNONYMOUS_CODING CG14346	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	15054764	3R_15054764_SNP [dm3] 3R_19229042_SNP [dm6]	C	T	2.683e^-4	0.766	SYNONYMOUS_CODING CG5250 UPSTREAM CG11703 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	14523680	3L_14523680_SNP [dm3] 3L_14530580_SNP [dm6]	G	C	2.690e^-4	0.766	INTRON bbg
3L	15629985	3L_15629985_SNP [dm3] 3L_15636885_SNP [dm6]	G	A	2.690e^-4	0.766	INTRON comm3	TF binding site mE1_TFBS_bab1
3R	26037044	3R_26037044_SNP [dm3] 3R_30211322_SNP [dm6]	A	G	2.690e^-4	0.766	UPSTREAM Cec-Psi1 & 1 other DOWNSTREAM Anp & 1 other INTERGENIC
X	8920187	X_8920187_SNP [dm3] X_9026154_SNP [dm6]	A	T	2.692e^-4	0.766	UTR_3_PRIME rdgA DOWNSTREAM rdgA INTRON CR43836
X	20818343	X_20818343_SNP [dm3] X_20947316_SNP [dm6]	G	T	2.696e^-4	0.766	INTERGENIC
2L	8583983	2L_8583983_SNP [dm3] 2L_8583983_SNP [dm6]	C	G	2.704e^-4	0.766	INTRON Sema-1a
2R	4496307	2R_4496307_SNP [dm3] 2R_8608802_SNP [dm6]	T	A	2.710e^-4	0.766	INTRON rgr
3L	11410476	3L_11410476_SNP [dm3] 3L_11417376_SNP [dm6]	A	C	2.714e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	6642153	X_6642153_SNP [dm3] X_6748120_SNP [dm6]	G	C	2.714e^-4	0.766	UPSTREAM CR44964 INTRON CG14439
2L	7953091	2L_7953091_SNP [dm3] 2L_7953091_SNP [dm6]	A	G	2.715e^-4	0.766	INTRON Snoo
2R	20049689	2R_20049689_INS [dm3] 2R_24162166_INS [dm6]	G	GG	2.726e^-4	0.766	UPSTREAM CG3328 DOWNSTREAM spag INTERGENIC
X	780360	X_780360_SNP [dm3] X_886327_SNP [dm6]	C	T	2.730e^-4	0.766	INTRON CG43867	TF binding site mE1_TFBS_HSA
3R	27173347	3R_27173347_SNP [dm3] 3R_31347625_SNP [dm6]	T	C	2.731e^-4	0.766	INTRON CG34347
2R	16996573	2R_16996573_SNP [dm3] 2R_21109068_SNP [dm6]	T	C	2.731e^-4	0.766	INTRON ktub
X	3245260	X_3245260_SNP [dm3] X_3351227_SNP [dm6]	T	A	2.731e^-4	0.766	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10648652	3L_10648652_SNP [dm3] 3L_10655552_SNP [dm6]	C	T	2.736e^-4	0.766	INTRON CG32066
X	12353097	X_12353097_SNP [dm3] X_12459064_SNP [dm6]	A	C	2.741e^-4	0.766	DOWNSTREAM Rab40 INTERGENIC
X	17906286	X_17906286_SNP [dm3] X_18012253_SNP [dm6]	A	C	2.746e^-4	0.766	INTRON Sh
2L	8051125	2L_8051125_SNP [dm3] 2L_8051125_SNP [dm6]	T	C	2.763e^-4	0.766	SYNONYMOUS_CODING CG7466	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	13796136	3L_13796136_SNP [dm3] 3L_13803036_SNP [dm6]	G	T	2.763e^-4	0.766	INTRON bru-3
2R	14008591	2R_14008591_SNP [dm3] 2R_18121086_SNP [dm6]	T	C	2.765e^-4	0.766	SYNONYMOUS_CODING stau	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	10582149	2R_10582149_SNP [dm3] 2R_14694644_SNP [dm6]	C	T	2.768e^-4	0.766	INTRON mspo
3R	21518163	3R_21518163_SNP [dm3] 3R_25692441_SNP [dm6]	G	A	2.777e^-4	0.766	INTERGENIC
3L	12937253	3L_12937253_SNP [dm3] 3L_12944153_SNP [dm6]	A	T	2.778e^-4	0.766	INTERGENIC
2R	16157417	2R_16157417_SNP [dm3] 2R_20269912_SNP [dm6]	C	A	2.780e^-4	0.766	SYNONYMOUS_CODING CG8908	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	6041538	2R_6041538_SNP [dm3] 2R_10154033_SNP [dm6]	G	T	2.780e^-4	0.766	INTRON CR45133 & 1 other
2L	10509329	2L_10509329_SNP [dm3] 2L_10509329_SNP [dm6]	A	C	2.781e^-4	0.766	INTRON CG7384	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	13837714	X_13837714_SNP [dm3] X_13943681_SNP [dm6]	T	C	2.782e^-4	0.766	INTRON mamo
2L	12698825	2L_12698825_SNP [dm3] 2L_12698825_SNP [dm6]	A	T	2.788e^-4	0.766	UTR_3_PRIME PICK1 DOWNSTREAM CG17036	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11116380	3L_11116380_SNP [dm3] 3L_11123280_SNP [dm6]	C	A	2.790e^-4	0.766	UPSTREAM CG42575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	16667377	2R_16667377_SNP [dm3] 2R_20779872_SNP [dm6]	A	T	2.797e^-4	0.766	UPSTREAM CG43711 DOWNSTREAM CR44666 INTERGENIC
3L	2862389	3L_2862389_SNP [dm3] 3L_2862389_SNP [dm6]	C	T	2.808e^-4	0.766	INTRON CG43444
X	10390900	X_10390900_SNP [dm3] X_10496867_SNP [dm6]	C	G	2.820e^-4	0.766	NON_SYNONYMOUS_CODING spri
3L	13796111	3L_13796111_SNP [dm3] 3L_13803011_SNP [dm6]	A	G	2.827e^-4	0.766	INTRON bru-3
2R	10239450	2R_10239450_SNP [dm3] 2R_14351945_SNP [dm6]	A	T	2.832e^-4	0.766	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
X	18047937	X_18047937_SNP [dm3] X_18153904_SNP [dm6]	A	C	2.836e^-4	0.766	INTERGENIC
4	195988	4_195988_SNP [dm3] 4_175362_SNP [dm6]	C	A	2.837e^-4	0.766	UPSTREAM CR45198 & 1 other INTRON CG33978
2L	12835729	2L_12835729_SNP [dm3] 2L_12835729_SNP [dm6]	T	G	2.844e^-4	0.766	INTERGENIC
2R	7451497	2R_7451497_SNP [dm3] 2R_11563992_SNP [dm6]	A	T	2.845e^-4	0.766	INTERGENIC
3R	24048256	3R_24048256_DEL [dm3] 3R_28222534_DEL [dm6]	CACGCCGCCC	C	2.848e^-4	0.766	INTRON CG34354
2L	2858774	2L_2858774_SNP [dm3] 2L_2858774_SNP [dm6]	C	T	2.852e^-4	0.766	INTRON CG2991	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	10544017	3L_10544017_SNP [dm3] 3L_10550917_SNP [dm6]	A	C	2.874e^-4	0.766	INTRON A2bp1
2R	4092900	2R_4092900_SNP [dm3] 2R_8205395_SNP [dm6]	G	C	2.899e^-4	0.766	NON_SYNONYMOUS_CODING CG14756 INTRON LRP1	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9422690	2R_9422690_SNP [dm3] 2R_13535185_SNP [dm6]	T	G	2.905e^-4	0.766	UPSTREAM Vmat DOWNSTREAM tRNA:K2:50C INTERGENIC
2R	11805189	2R_11805189_SNP [dm3] 2R_15917684_SNP [dm6]	A	T	2.908e^-4	0.766	DOWNSTREAM CR44373 INTRON sli	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	5133321	2L_5133321_SNP [dm3] 2L_5133321_SNP [dm6]	G	A	2.911e^-4	0.766	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_cad
X	10288250	X_10288250_SNP [dm3] X_10394217_SNP [dm6]	C	T	2.915e^-4	0.766	INTRON flw
3R	17616786	3R_17616786_SNP [dm3] 3R_21791064_SNP [dm6]	G	A	2.919e^-4	0.766	INTRON CASK
2R	14115066	2R_14115066_SNP [dm3] 2R_18227561_SNP [dm6]	C	T	2.920e^-4	0.766	EXON CR45310 & 1 other
3L	3947624	3L_3947624_SNP [dm3] 3L_3947624_SNP [dm6]	A	G	2.922e^-4	0.766	UPSTREAM CG10853 DOWNSTREAM CG14982 INTERGENIC
X	21329126	X_21329126_SNP [dm3] X_21458099_SNP [dm6]	A	G	2.925e^-4	0.766	UPSTREAM CG42343 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3R	26038621	3R_26038621_SNP [dm3] 3R_30212899_SNP [dm6]	T	C	2.927e^-4	0.766	UPSTREAM Cec2 DOWNSTREAM CecB & 1 other INTERGENIC
2R	11809768	2R_11809768_SNP [dm3] 2R_15922263_SNP [dm6]	A	C	2.929e^-4	0.766	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
3R	21386520	3R_21386520_SNP [dm3] 3R_25560798_SNP [dm6]	C	A	2.942e^-4	0.766	INTRON msi
4	1203962	4_1203962_SNP [dm3] 4_1183336_SNP [dm6]	T	A	2.943e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_dl transposable element FlyBase
X	14097625	X_14097625_SNP [dm3] X_14203592_SNP [dm6]	G	A	2.945e^-4	0.766	SYNONYMOUS_CODING l_1_G0007 DOWNSTREAM l_1_G0469	TF binding site BDTNP1_TFBS_dl
2L	12254718	2L_12254718_SNP [dm3] 2L_12254718_SNP [dm6]	G	A	2.947e^-4	0.766	INTRON aret
2R	12421544	2R_12421544_SNP [dm3] 2R_16534039_SNP [dm6]	T	G	2.951e^-4	0.766	UPSTREAM loopin-1 DOWNSTREAM Sema-2a INTERGENIC
2R	7586859	2R_7586859_SNP [dm3] 2R_11699354_SNP [dm6]	C	T	2.955e^-4	0.766	EXON Ir48a
3R	21993324	3R_21993324_SNP [dm3] 3R_26167602_SNP [dm6]	A	G	2.960e^-4	0.766	INTERGENIC
3R	26642265	3R_26642265_DEL [dm3] 3R_30816543_DEL [dm6]	ATATAAAAACTGAGTCA...	A	2.961e^-4	0.766	INTRON cindr
3L	6174667	3L_6174667_SNP [dm3] 3L_6181567_SNP [dm6]	G	A	2.962e^-4	0.766	SYNONYMOUS_CODING CG10274 DOWNSTREAM D19B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_sens
2L	8172371	2L_8172371_SNP [dm3] 2L_8172371_SNP [dm6]	T	G	2.966e^-4	0.766	INTRON Piezo
3R	14728515	3R_14728515_SNP [dm3] 3R_18902793_SNP [dm6]	A	G	2.968e^-4	0.766	UPSTREAM CG14294 INTRON CG34284	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	10714328	3L_10714328_SNP [dm3] 3L_10721228_SNP [dm6]	T	G	2.969e^-4	0.766	INTERGENIC
2L	564724	2L_564724_SNP [dm3] 2L_564724_SNP [dm6]	A	C	2.970e^-4	0.766	SYNONYMOUS_CODING CG2794 UPSTREAM CG11835	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	6106496	2R_6106496_DEL [dm3] 2R_10218991_DEL [dm6]	CATTGTTTATTCCC...	C	2.972e^-4	0.766	INTRON Hr46 & 1 other	TF binding site BDTNP1_TFBS_dl
3L	15628498	3L_15628498_SNP [dm3] 3L_15635398_SNP [dm6]	A	T	2.974e^-4	0.766	UPSTREAM comm3 INTRON comm3
3L	15252715	3L_15252715_SNP [dm3] 3L_15259615_SNP [dm6]	G	C	2.975e^-4	0.766	INTERGENIC	TF binding site mE1_TFBS_inv
X	6440815	X_6440815_SNP [dm3] X_6546782_SNP [dm6]	G	A	2.980e^-4	0.766	INTRON CG34417	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	6516093	2L_6516093_SNP [dm3] 2L_6516093_SNP [dm6]	C	T	2.985e^-4	0.766	INTRON CG31637
3L	6938549	3L_6938549_SNP [dm3] 3L_6945449_SNP [dm6]	A	G	2.998e^-4	0.766	INTRON tow	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3L	3382671	3L_3382671_SNP [dm3] 3L_3382671_SNP [dm6]	A	C	3.000e^-4	0.766	INTERGENIC
3L	8221163	3L_8221163_SNP [dm3] 3L_8228063_SNP [dm6]	A	G	3.008e^-4	0.766	INTERGENIC
3R	25054711	3R_25054711_SNP [dm3] 3R_29228989_SNP [dm6]	T	A	3.009e^-4	0.766	UPSTREAM CG15817 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
2R	4483724	2R_4483724_SNP [dm3] 2R_8596219_SNP [dm6]	T	C	3.012e^-4	0.766	DOWNSTREAM CG8735 INTERGENIC
3L	1565411	3L_1565411_SNP [dm3] 3L_1565411_SNP [dm6]	C	T	3.015e^-4	0.766	START_GAINED CG12003 UTR_5_PRIME CG12003 INTRON CG7879	TF binding site mE1_TFBS_sens
4	497133	4_497133_SNP [dm3] 4_476507_SNP [dm6]	A	G	3.018e^-4	0.766	INTRON Asator
2R	17087317	2R_17087317_DEL [dm3] 2R_21199812_DEL [dm6]	TTTACAATTTGTTCG...	T	3.030e^-4	0.766	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
3R	17540949	3R_17540949_SNP [dm3] 3R_21715227_SNP [dm6]	C	A	3.034e^-4	0.766	INTRON CG31176	TF binding site mE1_TFBS_HSA
3R	26654813	3R_26654813_SNP [dm3] 3R_30829091_SNP [dm6]	T	G	3.035e^-4	0.766	INTRON CG15544
3R	6931153	3R_6931153_SNP [dm3] 3R_11105431_SNP [dm6]	C	G	3.039e^-4	0.766	INTERGENIC
3L	3383210	3L_3383210_SNP [dm3] 3L_3383210_SNP [dm6]	T	G	3.050e^-4	0.766	INTERGENIC
2R	11802891	2R_11802891_SNP [dm3] 2R_15915386_SNP [dm6]	G	A	3.051e^-4	0.766	UPSTREAM CR44373 INTRON sli	TF binding site mE1_TFBS_Trl
3R	21455243	3R_21455243_SNP [dm3] 3R_25629521_SNP [dm6]	G	T	3.060e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	7795381	3L_7795381_SNP [dm3] 3L_7802281_SNP [dm6]	T	A	3.061e^-4	0.766	INTRON CG32369
3L	11116384	3L_11116384_SNP [dm3] 3L_11123284_SNP [dm6]	T	C	3.064e^-4	0.766	UPSTREAM CG42575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	11809826	2R_11809826_SNP [dm3] 2R_15922321_SNP [dm6]	T	A	3.065e^-4	0.766	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
2L	10547711	2L_10547711_SNP [dm3] 2L_10547711_SNP [dm6]	T	G	3.077e^-4	0.766	INTRON Trim9	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna
2R	13766868	2R_13766868_SNP [dm3] 2R_17879363_SNP [dm6]	A	G	3.082e^-4	0.766	SYNONYMOUS_CODING CG30325 DOWNSTREAM CG30110 INTRON Elk	TF binding site mE1_TFBS_HSA
2R	7120540	2R_7120540_SNP [dm3] 2R_11233035_SNP [dm6]	G	A	3.088e^-4	0.766	UPSTREAM metro & 1 other DOWNSTREAM CG13218 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3R	26025264	3R_26025264_SNP [dm3] 3R_30199542_SNP [dm6]	C	T	3.088e^-4	0.766	INTRON CG9743	TF binding site mE1_TFBS_cad
3L	11115300	3L_11115300_SNP [dm3] 3L_11122200_SNP [dm6]	T	C	3.092e^-4	0.766	SYNONYMOUS_CODING Ufd1-like DOWNSTREAM mRpL2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	5250856	2L_5250856_INS [dm3] 2L_5250856_INS [dm6]	C	TATATT	3.097e^-4	0.766	INTRON tkv
3L	906535	3L_906535_SNP [dm3] 3L_906535_SNP [dm6]	C	G	3.108e^-4	0.766	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26155751	3R_26155751_SNP [dm3] 3R_30330029_SNP [dm6]	G	C	3.113e^-4	0.766	INTRON hdc
3L	15600705	3L_15600705_SNP [dm3] 3L_15607605_SNP [dm6]	C	A	3.115e^-4	0.766	UTR_3_PRIME RhoGAP71E
2R	11845496	2R_11845496_SNP [dm3] 2R_15957991_SNP [dm6]	T	C	3.119e^-4	0.766	SPLICE_SITE_REGION Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	7586760	2R_7586760_SNP [dm3] 2R_11699255_SNP [dm6]	G	A	3.120e^-4	0.766	EXON Ir48a
2R	9348929	2R_9348929_SNP [dm3] 2R_13461424_SNP [dm6]	A	T	3.126e^-4	0.766	INTRON arr
2L	14200614	2L_14200614_SNP [dm3] 2L_14200614_SNP [dm6]	C	G	3.128e^-4	0.766	INTRON Dyrk2
2R	10573867	2R_10573867_SNP [dm3] 2R_14686362_SNP [dm6]	G	A	3.143e^-4	0.766	INTRON mspo
3R	19573617	3R_19573617_SNP [dm3] 3R_23747895_SNP [dm6]	T	C	3.150e^-4	0.766	SYNONYMOUS_CODING Hmgcr	TF binding site mE1_TFBS_cad
2L	16050420	2L_16050420_SNP [dm3] 2L_16050420_SNP [dm6]	T	C	3.157e^-4	0.766	UTR_5_PRIME beat-Ia	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	11853731	2R_11853731_SNP [dm3] 2R_15966226_SNP [dm6]	C	T	3.166e^-4	0.766	SYNONYMOUS_CODING Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	18805918	3L_18805918_SNP [dm3] 3L_18812818_SNP [dm6]	C	T	3.172e^-4	0.766	INTRON CG14073
2R	6748839	2R_6748839_SNP [dm3] 2R_10861334_SNP [dm6]	C	T	3.174e^-4	0.766	UTR_5_PRIME CG30015 INTRON CG30015	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	2858681	2L_2858681_SNP [dm3] 2L_2858681_SNP [dm6]	C	A	3.177e^-4	0.766	INTRON CG2991	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	23547615	3R_23547615_SNP [dm3] 3R_27721893_SNP [dm6]	G	A	3.178e^-4	0.766	INTERGENIC
2L	5232332	2L_5232332_SNP [dm3] 2L_5232332_SNP [dm6]	T	A	3.184e^-4	0.766	INTRON tkv	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	20769966	2L_20769966_DEL [dm3] 2L_20769966_DEL [dm6]	TTT	T	3.189e^-4	0.766	UPSTREAM cad INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2R	19870394	2R_19870394_SNP [dm3] 2R_23982871_SNP [dm6]	C	A	3.189e^-4	0.766	INTRON Sox14	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
X	7422236	X_7422236_SNP [dm3] X_7528203_SNP [dm6]	C	T	3.189e^-4	0.766	UPSTREAM CG43138 INTRON CG32719
2L	8172334	2L_8172334_SNP [dm3] 2L_8172334_SNP [dm6]	C	T	3.190e^-4	0.766	INTRON Piezo
3L	8018293	3L_8018293_INS [dm3] 3L_8025193_INS [dm6]	T	TCTGTT	3.194e^-4	0.766	INTRON nmo
X	675366	X_675366_SNP [dm3] X_781333_SNP [dm6]	T	A	3.197e^-4	0.766	INTRON fz3	TF binding site BDTNP1_TFBS_twi
2R	16158523	2R_16158523_SNP [dm3] 2R_20271018_SNP [dm6]	T	C	3.203e^-4	0.766	DOWNSTREAM CG10444 & 1 other INTERGENIC
2R	19789934	2R_19789934_SNP [dm3] 2R_23902411_SNP [dm6]	G	A	3.207e^-4	0.766	NON_SYNONYMOUS_CODING Lpt
3L	15265392	3L_15265392_SNP [dm3] 3L_15272292_SNP [dm6]	T	C	3.208e^-4	0.766	INTERGENIC
2L	10560409	2L_10560409_SNP [dm3] 2L_10560409_SNP [dm6]	T	G	3.211e^-4	0.766	INTRON Trim9
X	6503700	X_6503700_SNP [dm3] X_6609667_SNP [dm6]	T	A	3.211e^-4	0.766	INTRON pigs
2R	7028755	2R_7028755_SNP [dm3] 2R_11141250_SNP [dm6]	A	G	3.214e^-4	0.766	SYNONYMOUS_CODING CG13229
2R	14499104	2R_14499104_SNP [dm3] 2R_18611599_SNP [dm6]	C	T	3.217e^-4	0.766	UTR_5_PRIME GEFmeso DOWNSTREAM CG42697	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
X	10051471	X_10051471_SNP [dm3] X_10157438_SNP [dm6]	A	G	3.229e^-4	0.766	UPSTREAM CG43902 INTRON CR44894	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	9360188	2L_9360188_SNP [dm3] 2L_9360188_SNP [dm6]	C	T	3.235e^-4	0.766	INTERGENIC
2L	2858530	2L_2858530_SNP [dm3] 2L_2858530_SNP [dm6]	C	T	3.237e^-4	0.766	INTRON CG2991	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	7029733	2R_7029733_DEL [dm3] 2R_11142228_DEL [dm6]	ATG	A	3.238e^-4	0.766	INTRON CG13229
2R	17143042	2R_17143042_SNP [dm3] 2R_21255537_SNP [dm6]	C	T	3.242e^-4	0.766	UTR_5_PRIME Rgk3 UPSTREAM Rgk3
2R	9068839	2R_9068839_SNP [dm3] 2R_13181334_SNP [dm6]	A	G	3.242e^-4	0.766	SYNONYMOUS_CODING seq UTR_5_PRIME CG17724 INTRON CG17724 & 1 other	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo
2L	8172198	2L_8172198_SNP [dm3] 2L_8172198_SNP [dm6]	A	G	3.247e^-4	0.766	INTRON Piezo
3L	2694765	3L_2694765_SNP [dm3] 3L_2694765_SNP [dm6]	T	C	3.248e^-4	0.766	INTRON Fife
3L	22194091	3L_22194091_SNP [dm3] 3L_22200991_SNP [dm6]	A	T	3.249e^-4	0.766	INTRON olf413
2R	17790573	2R_17790573_SNP [dm3] 2R_21903068_SNP [dm6]	A	G	3.259e^-4	0.766	INTRON Fili
2L	1343168	2L_1343168_DEL [dm3] 2L_1343168_DEL [dm6]	TCGGACACATT...	T	3.264e^-4	0.766	DOWNSTREAM CG33922 INTERGENIC
2R	17089852	2R_17089852_SNP [dm3] 2R_21202347_SNP [dm6]	A	T	3.266e^-4	0.766	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	15629747	3R_15629747_SNP [dm3] 3R_19804025_SNP [dm6]	G	A	3.268e^-4	0.766	INTRON bnl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	2907904	2L_2907904_SNP [dm3] 2L_2907904_SNP [dm6]	G	T	3.281e^-4	0.766	INTRON lilli	TF binding site mE1_TFBS_bab1 mE1_TFBS_sens
4	422188	4_422188_SNP [dm3] 4_401562_SNP [dm6]	G	A	3.286e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
2R	16967667	2R_16967667_SNP [dm3] 2R_21080162_SNP [dm6]	G	A	3.287e^-4	0.766	UPSTREAM Treh INTRON Treh
3L	7000931	3L_7000931_SNP [dm3] 3L_7007831_SNP [dm6]	T	A	3.287e^-4	0.766	INTRON Mp
X	17157365	X_17157365_SNP [dm3] X_17263332_SNP [dm6]	G	T	3.292e^-4	0.766	INTRON f
X	13402318	X_13402318_SNP [dm3] X_13508285_SNP [dm6]	A	C	3.293e^-4	0.766	INTRON Neto
X	13402319	X_13402319_SNP [dm3] X_13508286_SNP [dm6]	T	C	3.293e^-4	0.766	INTRON Neto
3L	8019166	3L_8019166_DEL [dm3] 3L_8026066_DEL [dm6]	CAC	C	3.299e^-4	0.766	INTRON nmo
3L	417646	3L_417646_SNP [dm3] 3L_417646_SNP [dm6]	A	T	3.300e^-4	0.766	INTERGENIC	regulatory region REDfly_CRMs
3L	8026278	3L_8026278_SNP [dm3] 3L_8033178_SNP [dm6]	T	C	3.303e^-4	0.766	INTRON nmo
2R	11809925	2R_11809925_SNP [dm3] 2R_15922420_SNP [dm6]	T	A	3.306e^-4	0.766	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
2L	8583366	2L_8583366_SNP [dm3] 2L_8583366_SNP [dm6]	T	A	3.306e^-4	0.766	INTRON Sema-1a
3R	13929008	3R_13929008_SNP [dm3] 3R_18103286_SNP [dm6]	G	T	3.314e^-4	0.766	INTRON sr
2R	6372638	2R_6372638_SNP [dm3] 2R_10485133_SNP [dm6]	T	G	3.321e^-4	0.766	UTR_5_PRIME pre-lola-G INTRON lola & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3R	26861165	3R_26861165_SNP [dm3] 3R_31035443_SNP [dm6]	A	G	3.327e^-4	0.766	NON_SYNONYMOUS_CODING CG33773
3L	12639254	3L_12639254_SNP [dm3] 3L_12646154_SNP [dm6]	T	C	3.338e^-4	0.766	DOWNSTREAM CR32111 EXON CR32111
2L	4811153	2L_4811153_SNP [dm3] 2L_4811153_SNP [dm6]	G	C	3.344e^-4	0.766	DOWNSTREAM CR45297 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_en mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
X	6332180	X_6332180_SNP [dm3] X_6438147_SNP [dm6]	G	A	3.350e^-4	0.766	INTRON CG42340
X	3245234	X_3245234_SNP [dm3] X_3351201_SNP [dm6]	T	C	3.351e^-4	0.766	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	12422233	2R_12422233_SNP [dm3] 2R_16534728_SNP [dm6]	T	A	3.353e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	12422235	2R_12422235_SNP [dm3] 2R_16534730_SNP [dm6]	C	T	3.353e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	12422240	2R_12422240_DEL [dm3] 2R_16534735_DEL [dm6]	AA	T	3.353e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
X	4574151	X_4574151_SNP [dm3] X_4680118_SNP [dm6]	T	C	3.353e^-4	0.766	UTR_3_PRIME Pp2C1 UPSTREAM rap DOWNSTREAM Pp2C1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
2L	18297595	2L_18297595_SNP [dm3] 2L_18297595_SNP [dm6]	T	C	3.353e^-4	0.766	DOWNSTREAM CG5790 INTERGENIC
3L	8023278	3L_8023278_SNP [dm3] 3L_8030178_SNP [dm6]	A	G	3.358e^-4	0.766	INTRON nmo
3L	15114583	3L_15114583_SNP [dm3] 3L_15121483_SNP [dm6]	C	G	3.365e^-4	0.766	UPSTREAM CG32847 INTRON Cep135 & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3665857	3L_3665857_SNP [dm3] 3L_3665857_SNP [dm6]	G	A	3.367e^-4	0.766	INTERGENIC
X	13124538	X_13124538_INS [dm3] X_13230505_INS [dm6]	C	CCC	3.377e^-4	0.766	INTRON mew	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	22203349	3L_22203349_SNP [dm3] 3L_22210249_SNP [dm6]	T	C	3.380e^-4	0.766	INTRON olf413	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	19660497	2R_19660497_SNP [dm3] 2R_23772974_SNP [dm6]	G	A	3.390e^-4	0.766	INTRON CG9850
X	14911036	X_14911036_SNP [dm3] X_15017003_SNP [dm6]	C	T	3.401e^-4	0.766	SYNONYMOUS_CODING hiw	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
X	7444979	X_7444979_SNP [dm3] X_7550946_SNP [dm6]	A	T	3.402e^-4	0.766	INTERGENIC
2L	7465087	2L_7465087_SNP [dm3] 2L_7465087_SNP [dm6]	G	A	3.407e^-4	0.766	INTERGENIC
2R	17802922	2R_17802922_SNP [dm3] 2R_21915417_SNP [dm6]	A	G	3.407e^-4	0.766	INTRON Fili
3R	26861555	3R_26861555_SNP [dm3] 3R_31035833_SNP [dm6]	A	G	3.410e^-4	0.766	SYNONYMOUS_CODING CG33773
2R	12422211	2R_12422211_SNP [dm3] 2R_16534706_SNP [dm6]	C	T	3.416e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	12422216	2R_12422216_INS [dm3] 2R_16534711_INS [dm6]	A	AGTTTGGGCAGTTTGTG...	3.416e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	12422219	2R_12422219_INS [dm3] 2R_16534714_INS [dm6]	C	CAGTT	3.416e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	12422291	2R_12422291_SNP [dm3] 2R_16534786_SNP [dm6]	A	C	3.416e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	12422305	2R_12422305_INS [dm3] 2R_16534800_INS [dm6]	A	AATTCA	3.416e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	12422337	2R_12422337_SNP [dm3] 2R_16534832_SNP [dm6]	C	T	3.416e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
2R	16991063	2R_16991063_SNP [dm3] 2R_21103558_SNP [dm6]	A	G	3.429e^-4	0.766	INTRON ktub	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da
2L	1259299	2L_1259299_SNP [dm3] 2L_1259299_SNP [dm6]	G	T	3.444e^-4	0.766	INTRON robo3	TF binding site mE1_TFBS_Kr
X	1484526	X_1484526_SNP [dm3] X_1590493_SNP [dm6]	C	A	3.447e^-4	0.766	INTRON br & 1 other
3L	13784332	3L_13784332_SNP [dm3] 3L_13791232_SNP [dm6]	G	C	3.450e^-4	0.766	INTRON bru-3
3L	12639238	3L_12639238_INS [dm3] 3L_12646138_INS [dm6]	A	AATTATTCC	3.450e^-4	0.766	DOWNSTREAM CR32111 EXON CR32111
3L	15041488	3L_15041488_SNP [dm3] 3L_15048388_SNP [dm6]	T	C	3.451e^-4	0.766	DOWNSTREAM CG43678 INTRON Sytbeta	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3L	1153522	3L_1153522_SNP [dm3] 3L_1153522_SNP [dm6]	G	A	3.460e^-4	0.766	INTRON bab2	TF binding site mE1_TFBS_cad
2R	6041495	2R_6041495_SNP [dm3] 2R_10153990_SNP [dm6]	T	C	3.468e^-4	0.766	SPLICE_SITE_REGION KCNQ INTRON CR45133 & 1 other
X	19562380	X_19562380_SNP [dm3] X_19668347_SNP [dm6]	C	T	3.474e^-4	0.766	UPSTREAM CR44512 INTRON Zw	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	8910718	X_8910718_SNP [dm3] X_9016685_SNP [dm6]	T	C	3.474e^-4	0.766	INTRON CR43836 & 1 other
4	801714	4_801714_SNP [dm3] 4_781088_SNP [dm6]	T	G	3.485e^-4	0.766	NON_SYNONYMOUS_CODING MED26	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	21413514	3R_21413514_SNP [dm3] 3R_25587792_SNP [dm6]	T	A	3.486e^-4	0.766	INTRON msi	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	12027945	2L_12027945_SNP [dm3] 2L_12027945_SNP [dm6]	G	T	3.489e^-4	0.766	INTRON dmGlut	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	20982585	3R_20982585_SNP [dm3] 3R_25156863_SNP [dm6]	T	C	3.492e^-4	0.766	INTERGENIC
X	12677099	X_12677099_SNP [dm3] X_12783066_SNP [dm6]	G	A	3.493e^-4	0.766	INTRON CG32647
X	14514678	X_14514678_SNP [dm3] X_14620645_SNP [dm6]	C	A	3.494e^-4	0.766	INTRON NetA
3L	10874472	3L_10874472_SNP [dm3] 3L_10881372_SNP [dm6]	C	T	3.496e^-4	0.766	NON_SYNONYMOUS_CODING CG6409	TF binding site mE1_TFBS_chinmo
2L	7069077	2L_7069077_SNP [dm3] 2L_7069077_SNP [dm6]	G	A	3.499e^-4	0.766	SYNONYMOUS_CODING CG11289 DOWNSTREAM Pvf2	TF binding site mE1_TFBS_sens
2R	9932235	2R_9932235_SNP [dm3] 2R_14044730_SNP [dm6]	T	C	3.502e^-4	0.766	INTRON mam	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	7029712	2R_7029712_SNP [dm3] 2R_11142207_SNP [dm6]	A	C	3.508e^-4	0.766	INTRON CG13229
3L	13780353	3L_13780353_SNP [dm3] 3L_13787253_SNP [dm6]	T	A	3.514e^-4	0.766	INTRON bru-3
3R	14516222	3R_14516222_SNP [dm3] 3R_18690500_SNP [dm6]	T	A	3.516e^-4	0.766	INTRON Muc91C
2R	12300285	2R_12300285_SNP [dm3] 2R_16412780_SNP [dm6]	T	C	3.517e^-4	0.766	INTRON Sema-2b
3R	26035015	3R_26035015_SNP [dm3] 3R_30209293_SNP [dm6]	G	A	3.527e^-4	0.766	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	12651606	3L_12651606_SNP [dm3] 3L_12658506_SNP [dm6]	C	A	3.539e^-4	0.766	UPSTREAM CR44553 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	27278005	3R_27278005_SNP [dm3] 3R_31452283_SNP [dm6]	A	C	3.542e^-4	0.766	INTRON Gprk2	TF binding site mE1_TFBS_cad
3R	14236469	3R_14236469_SNP [dm3] 3R_18410747_SNP [dm6]	G	A	3.544e^-4	0.766	SYNONYMOUS_CODING CG10864 UPSTREAM CG31122 INTRON CG31122	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	7596500	3R_7596500_SNP [dm3] 3R_11770778_SNP [dm6]	A	G	3.545e^-4	0.766	INTRON l_3_neo38	TF binding site BDTNP1_TFBS_dl
3R	5359690	3R_5359690_SNP [dm3] 3R_9533968_SNP [dm6]	T	A	3.552e^-4	0.766	UPSTREAM by INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	8609509	3R_8609509_SNP [dm3] 3R_12783787_SNP [dm6]	C	A	3.562e^-4	0.766	UPSTREAM beat-Vc INTERGENIC
3L	21637277	3L_21637277_SNP [dm3] 3L_21644177_SNP [dm6]	A	G	3.563e^-4	0.766	UPSTREAM CG43980 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
2R	16158454	2R_16158454_SNP [dm3] 2R_20270949_SNP [dm6]	C	G	3.569e^-4	0.766	UTR_3_PRIME CG8908 DOWNSTREAM CG10444
3L	7535084	3L_7535084_SNP [dm3] 3L_7541984_SNP [dm6]	G	A	3.572e^-4	0.766	SYNONYMOUS_CODING CG32376 UPSTREAM CG32374	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	8725261	2R_8725261_SNP [dm3] 2R_12837756_SNP [dm6]	A	C	3.575e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9360620	2L_9360620_SNP [dm3] 2L_9360620_SNP [dm6]	G	T	3.575e^-4	0.766	INTERGENIC
3R	18991432	3R_18991432_SNP [dm3] 3R_23165710_SNP [dm6]	C	A	3.578e^-4	0.766	INTERGENIC
2L	10529892	2L_10529892_SNP [dm3] 2L_10529892_SNP [dm6]	G	T	3.581e^-4	0.766	INTRON Lip4
3R	26564587	3R_26564587_SNP [dm3] 3R_30738865_SNP [dm6]	A	C	3.586e^-4	0.766	INTERGENIC
2L	7467306	2L_7467306_SNP [dm3] 2L_7467306_SNP [dm6]	A	G	3.592e^-4	0.766	INTRON CG6055	TF binding site mE1_TFBS_inv
3R	26615815	3R_26615815_SNP [dm3] 3R_30790093_SNP [dm6]	C	T	3.598e^-4	0.766	UTR_3_PRIME wts DOWNSTREAM zfh1
3R	26017837	3R_26017837_SNP [dm3] 3R_30192115_SNP [dm6]	G	C	3.607e^-4	0.766	UPSTREAM CG9747 INTERGENIC
3L	12639240	3L_12639240_SNP [dm3] 3L_12646140_SNP [dm6]	C	G	3.609e^-4	0.766	DOWNSTREAM CR32111 EXON CR32111
2L	12156416	2L_12156416_SNP [dm3] 2L_12156416_SNP [dm6]	C	G	3.618e^-4	0.766	INTRON CG31760
3L	8018377	3L_8018377_SNP [dm3] 3L_8025277_SNP [dm6]	T	C	3.623e^-4	0.766	INTRON nmo
2R	11845732	2R_11845732_SNP [dm3] 2R_15958227_SNP [dm6]	T	C	3.624e^-4	0.766	SYNONYMOUS_CODING Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	11958070	2L_11958070_SNP [dm3] 2L_11958070_SNP [dm6]	C	G	3.625e^-4	0.766	EXON CR43314
3L	21570633	3L_21570633_SNP [dm3] 3L_21577533_SNP [dm6]	G	A	3.628e^-4	0.766	UPSTREAM CR43939 INTERGENIC	TF binding site BDTNP1_TFBS_hb mE1_TFBS_HSA
2L	12851933	2L_12851933_SNP [dm3] 2L_12851933_SNP [dm6]	T	A	3.638e^-4	0.766	INTERGENIC	TF binding site mE1_TFBS_inv
2R	9924871	2R_9924871_SNP [dm3] 2R_14037366_SNP [dm6]	G	A	3.642e^-4	0.766	INTRON mam	TF binding site mE1_TFBS_HSA
2R	10239420	2R_10239420_SNP [dm3] 2R_14351915_SNP [dm6]	C	T	3.643e^-4	0.766	UPSTREAM CG8613 DOWNSTREAM Shroom INTERGENIC	TF binding site mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn
3L	13970212	3L_13970212_SNP [dm3] 3L_13977112_SNP [dm6]	T	A	3.650e^-4	0.766	SYNONYMOUS_CODING Hsc70-1 DOWNSTREAM CG17364	TF binding site mE1_TFBS_chinmo
2R	6235398	2R_6235398_SNP [dm3] 2R_10347893_SNP [dm6]	A	C	3.654e^-4	0.766	INTRON CG42732
3L	12297854	3L_12297854_SNP [dm3] 3L_12304754_SNP [dm6]	C	G	3.663e^-4	0.766	INTERGENIC
2R	9250604	2R_9250604_SNP [dm3] 2R_13363099_SNP [dm6]	G	A	3.671e^-4	0.766	UPSTREAM CR45312 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
3R	27254571	3R_27254571_SNP [dm3] 3R_31428849_SNP [dm6]	T	C	3.671e^-4	0.766	INTRON Gprk2
2R	12554286	2R_12554286_SNP [dm3] 2R_16666781_SNP [dm6]	A	G	3.680e^-4	0.766	INTRON Picot
X	6007473	X_6007473_SNP [dm3] X_6113440_SNP [dm6]	G	A	3.682e^-4	0.766	SYNONYMOUS_CODING Ca-alpha1T	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3R	26035045	3R_26035045_SNP [dm3] 3R_30209323_SNP [dm6]	T	C	3.684e^-4	0.766	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2L	5019113	2L_5019113_SNP [dm3] 2L_5019113_SNP [dm6]	G	A	3.698e^-4	0.766	INTRON vkg
3R	20838656	3R_20838656_SNP [dm3] 3R_25012934_SNP [dm6]	C	G	3.705e^-4	0.766	SYNONYMOUS_CODING tnc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	10017195	X_10017195_SNP [dm3] X_10123162_SNP [dm6]	T	G	3.707e^-4	0.766	SYNONYMOUS_CODING RhoU INTRON CR44894 EXON CR44894
2L	8537129	2L_8537129_INS [dm3] 2L_8537129_INS [dm6]	T	TT	3.709e^-4	0.766	INTRON CG17834
2L	8537132	2L_8537132_SNP [dm3] 2L_8537132_SNP [dm6]	C	T	3.709e^-4	0.766	INTRON CG17834
3L	13791676	3L_13791676_SNP [dm3] 3L_13798576_SNP [dm6]	G	A	3.720e^-4	0.766	UPSTREAM bru-3 INTRON bru-3
X	11267553	X_11267553_SNP [dm3] X_11373520_SNP [dm6]	T	C	3.725e^-4	0.766	INTRON dlg1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	7444982	X_7444982_DEL [dm3] X_7550949_DEL [dm6]	AA	A	3.735e^-4	0.766	INTERGENIC
4	476928	4_476928_SNP [dm3] 4_456302_SNP [dm6]	A	G	3.737e^-4	0.766	INTERGENIC	transposable element FlyBase
3R	16707512	3R_16707512_SNP [dm3] 3R_20881790_SNP [dm6]	C	T	3.737e^-4	0.766	INTERGENIC
3L	10714334	3L_10714334_SNP [dm3] 3L_10721234_SNP [dm6]	A	G	3.743e^-4	0.766	INTERGENIC
X	13401808	X_13401808_SNP [dm3] X_13507775_SNP [dm6]	G	A	3.744e^-4	0.766	INTRON Neto
2R	19389831	2R_19389831_SNP [dm3] 2R_23502308_SNP [dm6]	T	C	3.752e^-4	0.766	UPSTREAM CG13559 INTERGENIC	TF binding site mE1_TFBS_inv
3L	8221123	3L_8221123_SNP [dm3] 3L_8228023_SNP [dm6]	C	T	3.754e^-4	0.766	INTERGENIC
3L	837708	3L_837708_SNP [dm3] 3L_837708_SNP [dm6]	T	C	3.757e^-4	0.766	UPSTREAM CG13887 & 1 other DOWNSTREAM CG42554 INTRON CG13901	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA
3R	16707624	3R_16707624_SNP [dm3] 3R_20881902_SNP [dm6]	G	A	3.761e^-4	0.766	INTERGENIC
X	3245227	X_3245227_SNP [dm3] X_3351194_SNP [dm6]	T	A	3.762e^-4	0.766	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18814994	2L_18814994_SNP [dm3] 2L_18814994_SNP [dm6]	G	A	3.763e^-4	0.766	INTERGENIC
2R	7029174	2R_7029174_SNP [dm3] 2R_11141669_SNP [dm6]	G	T	3.764e^-4	0.766	INTRON CG13229
3L	13643808	3L_13643808_SNP [dm3] 3L_13650708_SNP [dm6]	A	T	3.764e^-4	0.766	INTRON bru-3
2R	16955921	2R_16955921_SNP [dm3] 2R_21068416_SNP [dm6]	G	A	3.769e^-4	0.766	SYNONYMOUS_CODING Cht9 EXON CR44703	TF binding site mE1_TFBS_cad
2R	11809909	2R_11809909_SNP [dm3] 2R_15922404_SNP [dm6]	G	A	3.769e^-4	0.766	UPSTREAM sli DOWNSTREAM bdg INTERGENIC	TF binding site BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_HSA
2R	12422318	2R_12422318_SNP [dm3] 2R_16534813_SNP [dm6]	T	A	3.770e^-4	0.766	UPSTREAM loopin-1 INTERGENIC
X	16900488	X_16900488_SNP [dm3] X_17006455_SNP [dm6]	C	G	3.771e^-4	0.766	INTRON CG45002
X	16900489	X_16900489_SNP [dm3] X_17006456_SNP [dm6]	T	C	3.777e^-4	0.766	INTRON CG45002
3L	12247193	3L_12247193_SNP [dm3] 3L_12254093_SNP [dm6]	C	T	3.778e^-4	0.766	INTRON app
2L	7466558	2L_7466558_SNP [dm3] 2L_7466558_SNP [dm6]	T	A	3.781e^-4	0.766	UTR_5_PRIME CG6055
2R	19303839	2R_19303839_SNP [dm3] 2R_23416316_SNP [dm6]	C	G	3.782e^-4	0.766	INTRON CG9812 & 1 other	TF binding site BDTNP1_TFBS_sna mE1_TFBS_HSA
X	17157293	X_17157293_SNP [dm3] X_17263260_SNP [dm6]	G	T	3.786e^-4	0.766	INTRON f
2L	2896119	2L_2896119_SNP [dm3] 2L_2896119_SNP [dm6]	G	A	3.787e^-4	0.766	INTRON lilli	TF binding site BDTNP1_TFBS_dl
2R	17086073	2R_17086073_SNP [dm3] 2R_21198568_SNP [dm6]	G	T	3.800e^-4	0.766	SYNONYMOUS_CODING Lapsyn
2L	16546453	2L_16546453_SNP [dm3] 2L_16546453_SNP [dm6]	T	G	3.804e^-4	0.766	INTRON CG42389	TF binding site BDTNP1_TFBS_dl
X	16428938	X_16428938_SNP [dm3] X_16534905_SNP [dm6]	T	A	3.808e^-4	0.766	INTERGENIC
3R	7672120	3R_7672120_SNP [dm3] 3R_11846398_SNP [dm6]	A	T	3.811e^-4	0.766	INTRON CG6959
3L	5299744	3L_5299744_SNP [dm3] 3L_5306644_SNP [dm6]	A	T	3.818e^-4	0.766	INTERGENIC
X	17612467	X_17612467_SNP [dm3] X_17718434_SNP [dm6]	T	C	3.823e^-4	0.766	INTRON CG42684	TF binding site mE1_TFBS_zfh1
3L	3239232	3L_3239232_SNP [dm3] 3L_3239232_SNP [dm6]	A	T	3.826e^-4	0.766	INTRON CG17746	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
X	18047960	X_18047960_SNP [dm3] X_18153927_SNP [dm6]	C	T	3.827e^-4	0.766	INTERGENIC
X	7487598	X_7487598_SNP [dm3] X_7593565_SNP [dm6]	C	T	3.827e^-4	0.766	INTERGENIC	regulatory region REDfly_CRMs
3R	27111741	3R_27111741_SNP [dm3] 3R_31286019_SNP [dm6]	T	G	3.828e^-4	0.766	INTERGENIC
3L	10606646	3L_10606646_SNP [dm3] 3L_10613546_SNP [dm6]	C	A	3.828e^-4	0.766	INTERGENIC
X	13830111	X_13830111_SNP [dm3] X_13936078_SNP [dm6]	G	A	3.834e^-4	0.766	INTRON mamo
3L	10876720	3L_10876720_SNP [dm3] 3L_10883620_SNP [dm6]	T	A	3.837e^-4	0.766	DOWNSTREAM CG6404 & 1 other INTERGENIC
2R	11805179	2R_11805179_SNP [dm3] 2R_15917674_SNP [dm6]	A	G	3.838e^-4	0.766	DOWNSTREAM CR44373 INTRON sli	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	10357630	3L_10357630_SNP [dm3] 3L_10364530_SNP [dm6]	A	G	3.840e^-4	0.766	UPSTREAM CR44327 & 1 other EXON CR44327	TF binding site BDTNP1_TFBS_dl
3L	8809842	3L_8809842_SNP [dm3] 3L_8816742_SNP [dm6]	C	A	3.840e^-4	0.766	INTERGENIC
2R	20049698	2R_20049698_SNP [dm3] 2R_24162175_SNP [dm6]	G	T	3.841e^-4	0.766	UPSTREAM CG3328 DOWNSTREAM spag INTERGENIC
3L	14546725	3L_14546725_SNP [dm3] 3L_14553625_SNP [dm6]	T	A	3.848e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_Kr
3L	12336148	3L_12336148_SNP [dm3] 3L_12343048_SNP [dm6]	T	C	3.851e^-4	0.766	INTRON CrzR
3R	12843050	3R_12843050_SNP [dm3] 3R_17017328_SNP [dm6]	C	T	3.852e^-4	0.766	INTRON Pxd	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	12643785	3L_12643785_SNP [dm3] 3L_12650685_SNP [dm6]	G	A	3.858e^-4	0.766	EXON CR43431	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd
3L	10874771	3L_10874771_SNP [dm3] 3L_10881671_SNP [dm6]	C	T	3.865e^-4	0.766	SYNONYMOUS_CODING CG6409	TF binding site mE1_TFBS_chinmo
X	12792279	X_12792279_SNP [dm3] X_12898246_SNP [dm6]	T	A	3.873e^-4	0.766	SYNONYMOUS_CODING CG32650 UPSTREAM Pde9 DOWNSTREAM CG32649	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	19816145	3R_19816145_SNP [dm3] 3R_23990423_SNP [dm6]	G	A	3.873e^-4	0.766	SYNONYMOUS_CODING CG13604
3R	19816202	3R_19816202_SNP [dm3] 3R_23990480_SNP [dm6]	T	A	3.873e^-4	0.766	SYNONYMOUS_CODING CG13604 UTR_5_PRIME CG13604
2R	10693004	2R_10693004_SNP [dm3] 2R_14805499_SNP [dm6]	G	A	3.875e^-4	0.766	INTRON kn	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
3R	26034996	3R_26034996_SNP [dm3] 3R_30209274_SNP [dm6]	T	C	3.877e^-4	0.766	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3R	26037477	3R_26037477_SNP [dm3] 3R_30211755_SNP [dm6]	C	G	3.883e^-4	0.766	UPSTREAM CecA2 DOWNSTREAM CecA1 & 1 other INTERGENIC
2R	14016928	2R_14016928_SNP [dm3] 2R_18129423_SNP [dm6]	A	G	3.883e^-4	0.766	SYNONYMOUS_CODING Dip3 DOWNSTREAM Hsf	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3R	19378063	3R_19378063_SNP [dm3] 3R_23552341_SNP [dm6]	C	T	3.886e^-4	0.766	INTERGENIC
X	10218307	X_10218307_SNP [dm3] X_10324274_SNP [dm6]	G	A	3.898e^-4	0.766	START_GAINED alpha-Man-I UTR_5_PRIME alpha-Man-I	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens mE1_TFBS_Trl
2R	12418169	2R_12418169_SNP [dm3] 2R_16530664_SNP [dm6]	A	C	3.902e^-4	0.766	INTRON Sema-2a	TF binding site BDTNP1_TFBS_twi
X	9093612	X_9093612_SNP [dm3] X_9199579_SNP [dm6]	G	T	3.903e^-4	0.766	SYNONYMOUS_CODING su_r_	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11119250	3L_11119250_SNP [dm3] 3L_11126150_SNP [dm6]	A	T	3.904e^-4	0.766	INTRON CG42575	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	2549184	2L_2549184_SNP [dm3] 2L_2549184_SNP [dm6]	G	A	3.914e^-4	0.766	INTERGENIC
2L	10232262	2L_10232262_DEL [dm3] 2L_10232262_DEL [dm6]	GA	G	3.918e^-4	0.766	UPSTREAM eEF1delta & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Ubx
2L	10232265	2L_10232265_SNP [dm3] 2L_10232265_SNP [dm6]	A	G	3.918e^-4	0.766	UPSTREAM eEF1delta & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Ubx
4	701788	4_701788_SNP [dm3] 4_681162_SNP [dm6]	C	T	3.922e^-4	0.766	INTRON CG11360	TF binding site BDTNP1_TFBS_dl
3R	6254419	3R_6254419_SNP [dm3] 3R_10428697_SNP [dm6]	C	T	3.925e^-4	0.766	INTERGENIC
2R	6975871	2R_6975871_SNP [dm3] 2R_11088366_SNP [dm6]	C	A	3.928e^-4	0.766	DOWNSTREAM CG43188 INTRON luna
X	13402173	X_13402173_SNP [dm3] X_13508140_SNP [dm6]	C	T	3.931e^-4	0.766	INTRON Neto
3L	9341465	3L_9341465_SNP [dm3] 3L_9348365_SNP [dm6]	A	G	3.936e^-4	0.766	DOWNSTREAM PGRP-LC INTERGENIC
3R	17560091	3R_17560091_SNP [dm3] 3R_21734369_SNP [dm6]	A	G	3.946e^-4	0.766	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	7709869	3R_7709869_SNP [dm3] 3R_11884147_SNP [dm6]	C	A	3.946e^-4	0.766	SYNONYMOUS_CODING mthl5 INTRON CG31368
2R	17160591	2R_17160591_SNP [dm3] 2R_21273086_SNP [dm6]	T	C	3.957e^-4	0.766	INTRON Rgk3
2R	9422042	2R_9422042_SNP [dm3] 2R_13534537_SNP [dm6]	A	C	3.959e^-4	0.766	UPSTREAM Vmat INTERGENIC	TF binding site BDTNP1_TFBS_sna
X	11280364	X_11280364_SNP [dm3] X_11386331_SNP [dm6]	G	T	3.960e^-4	0.766	INTRON dlg1
2R	11853944	2R_11853944_SNP [dm3] 2R_15966439_SNP [dm6]	G	A	3.962e^-4	0.766	SYNONYMOUS_CODING Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	686840	3L_686840_SNP [dm3] 3L_686840_SNP [dm6]	T	G	3.966e^-4	0.766	SYNONYMOUS_CODING CG3344	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	8610532	3R_8610532_SNP [dm3] 3R_12784810_SNP [dm6]	C	T	3.966e^-4	0.766	INTERGENIC
2L	12956096	2L_12956096_SNP [dm3] 2L_12956096_SNP [dm6]	T	A	3.967e^-4	0.766	INTERGENIC
X	17256743	X_17256743_SNP [dm3] X_17362710_SNP [dm6]	G	A	3.976e^-4	0.766	INTERGENIC
3L	11530428	3L_11530428_SNP [dm3] 3L_11537328_SNP [dm6]	G	A	3.978e^-4	0.766	INTRON Mob2
2L	564707	2L_564707_SNP [dm3] 2L_564707_SNP [dm6]	T	A	3.979e^-4	0.766	NON_SYNONYMOUS_CODING CG2794 UPSTREAM CG11835	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	14441817	X_14441817_SNP [dm3] X_14547784_SNP [dm6]	A	G	3.984e^-4	0.766	INTERGENIC
3R	13705141	3R_13705141_SNP [dm3] 3R_17879419_SNP [dm6]	G	A	3.988e^-4	0.766	INTRON Rim
2R	3902907	2R_3902907_SNP [dm3] 2R_8015402_SNP [dm6]	A	T	3.994e^-4	0.766	DOWNSTREAM mir-4981 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	26035016	3R_26035016_SNP [dm3] 3R_30209294_SNP [dm6]	T	C	3.994e^-4	0.766	UPSTREAM RpS7 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
X	4572217	X_4572217_INS [dm3] X_4678184_INS [dm6]	G	GG	3.998e^-4	0.766	UPSTREAM rap INTRON rap	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	4490401	2R_4490401_SNP [dm3] 2R_8602896_SNP [dm6]	C	T	4.003e^-4	0.766	INTRON rgr	TF binding site mE1_TFBS_cad
X	7139667	X_7139667_SNP [dm3] X_7245634_SNP [dm6]	G	A	4.008e^-4	0.766	INTRON CR44357	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	12423880	2R_12423880_SNP [dm3] 2R_16536375_SNP [dm6]	C	T	4.009e^-4	0.766	SYNONYMOUS_CODING loopin-1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	16990855	2R_16990855_SNP [dm3] 2R_21103350_SNP [dm6]	C	T	4.013e^-4	0.766	INTRON ktub	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
X	12793017	X_12793017_SNP [dm3] X_12898984_SNP [dm6]	G	A	4.013e^-4	0.766	SYNONYMOUS_CODING CG32649 UPSTREAM CG32650	TF binding site mE1_TFBS_chinmo
2R	9207206	2R_9207206_SNP [dm3] 2R_13319701_SNP [dm6]	A	C	4.014e^-4	0.766	INTERGENIC	TF binding site mE1_TFBS_inv
3L	13789012	3L_13789012_SNP [dm3] 3L_13795912_SNP [dm6]	C	T	4.014e^-4	0.766	INTRON bru-3
3L	13789013	3L_13789013_SNP [dm3] 3L_13795913_SNP [dm6]	C	T	4.014e^-4	0.766	INTRON bru-3
X	6642261	X_6642261_SNP [dm3] X_6748228_SNP [dm6]	C	T	4.017e^-4	0.766	UPSTREAM CR44964 INTRON CG14439
3R	26017894	3R_26017894_SNP [dm3] 3R_30192172_SNP [dm6]	G	C	4.021e^-4	0.766	UPSTREAM CG9747 INTERGENIC
2R	7039005	2R_7039005_SNP [dm3] 2R_11151500_SNP [dm6]	A	G	4.022e^-4	0.766	INTRON CG13229
X	7962874	X_7962874_SNP [dm3] X_8068841_SNP [dm6]	A	C	4.039e^-4	0.766	INTRON mys	TF binding site mE1_TFBS_cad
4	974809	4_974809_SNP [dm3] 4_954183_SNP [dm6]	T	C	4.052e^-4	0.766	SYNONYMOUS_CODING 4E-T
3L	12298079	3L_12298079_SNP [dm3] 3L_12304979_SNP [dm6]	C	A	4.052e^-4	0.766	INTERGENIC
3L	8025393	3L_8025393_SNP [dm3] 3L_8032293_SNP [dm6]	A	T	4.053e^-4	0.766	INTRON nmo
X	21300022	X_21300022_SNP [dm3] X_21428995_SNP [dm6]	T	A	4.057e^-4	0.766	SYNONYMOUS_CODING CG10918 INTRON CG42343
X	6663639	X_6663639_SNP [dm3] X_6769606_SNP [dm6]	A	G	4.057e^-4	0.766	NON_SYNONYMOUS_CODING CG14438	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	10520804	2R_10520804_SNP [dm3] 2R_14633299_SNP [dm6]	C	G	4.060e^-4	0.766	INTERGENIC
2L	5313146	2L_5313146_SNP [dm3] 2L_5313146_SNP [dm6]	C	T	4.077e^-4	0.766	INTRON CG14024	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
X	6241378	X_6241378_DEL [dm3] X_6347345_DEL [dm6]	GCAAAAGCAAAGG...	G	4.081e^-4	0.766	UTR_5_PRIME CG3847	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
3L	14542989	3L_14542989_SNP [dm3] 3L_14549889_SNP [dm6]	G	C	4.086e^-4	0.766	INTRON CG9238	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	10195766	3L_10195766_SNP [dm3] 3L_10202666_SNP [dm6]	C	G	4.090e^-4	0.766	UPSTREAM ect INTERGENIC
3R	21439514	3R_21439514_SNP [dm3] 3R_25613792_SNP [dm6]	T	C	4.099e^-4	0.766	UPSTREAM CG5079 INTRON Npl4
2L	10232271	2L_10232271_SNP [dm3] 2L_10232271_SNP [dm6]	C	A	4.101e^-4	0.766	UPSTREAM eEF1delta & 1 other INTERGENIC	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Ubx
3L	15387593	3L_15387593_SNP [dm3] 3L_15394493_SNP [dm6]	G	C	4.112e^-4	0.766	INTERGENIC
2R	6495549	2R_6495549_SNP [dm3] 2R_10608044_SNP [dm6]	T	A	4.126e^-4	0.766	INTRON psq

By genomic position
Variant impact
Gene name

4μg/mL survivorship phenotype phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results