DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=1.831e^-3)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_2R_NS	0.09284

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_2R_NS	6.6349	0.0362

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2525 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2R	7007339	2R_7007339_SNP [dm3] 2R_11119834_SNP [dm6]	T	C	1.080e^-7	0.202	UTR_3_PRIME Cyp12d1-p DOWNSTREAM Cyp12d1-p
3R	25878785	3R_25878785_SNP [dm3] 3R_30053063_SNP [dm6]	T	C	5.748e^-7	0.539	SYNONYMOUS_CODING CG7946 UPSTREAM CG15528 DOWNSTREAM CR44046	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	8531246	2L_8531246_SNP [dm3] 2L_8531246_SNP [dm6]	A	T	1.080e^-6	0.555	INTRON CG17834
2R	10175892	2R_10175892_SNP [dm3] 2R_14288387_SNP [dm6]	A	C	1.398e^-6	0.555	UPSTREAM Ih INTRON Ih
2R	17635885	2R_17635885_SNP [dm3] 2R_21748380_SNP [dm6]	C	G	1.974e^-6	0.555	INTERGENIC
2R	10175861	2R_10175861_INS [dm3] 2R_14288356_INS [dm6]	T	TCAAATA	2.575e^-6	0.555	UPSTREAM Ih INTRON Ih
2R	10175886	2R_10175886_SNP [dm3] 2R_14288381_SNP [dm6]	C	G	2.575e^-6	0.555	UPSTREAM Ih INTRON Ih
3L	5860146	3L_5860146_SNP [dm3] 3L_5867046_SNP [dm6]	C	T	3.519e^-6	0.555	INTERGENIC
3L	871031	3L_871031_SNP [dm3] 3L_871031_SNP [dm6]	A	G	4.495e^-6	0.555	UTR_3_PRIME CG12502 UPSTREAM CG32479 DOWNSTREAM CG12502	TF binding site BDTNP1_TFBS_dl
3L	870930	3L_870930_SNP [dm3] 3L_870930_SNP [dm6]	G	A	4.555e^-6	0.555	UTR_3_PRIME CG12502 UPSTREAM CG32479 DOWNSTREAM CG12502	TF binding site BDTNP1_TFBS_dl
2R	16667463	2R_16667463_SNP [dm3] 2R_20779958_SNP [dm6]	C	T	4.610e^-6	0.555	UPSTREAM CG43711 DOWNSTREAM CR44666 INTERGENIC
2R	7004530	2R_7004530_SNP [dm3] 2R_11117025_SNP [dm6]	T	A	5.880e^-6	0.555	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	7535710	3L_7535710_SNP [dm3] 3L_7542610_SNP [dm6]	T	A	6.356e^-6	0.555	UPSTREAM CG32376 INTERGENIC	TF binding site mE1_TFBS_HSA
2R	10175794	2R_10175794_DEL [dm3] 2R_14288289_DEL [dm6]	AT	A	6.656e^-6	0.555	UPSTREAM Ih INTRON Ih
3L	7535288	3L_7535288_SNP [dm3] 3L_7542188_SNP [dm6]	A	C	7.088e^-6	0.555	SYNONYMOUS_CODING CG32376	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10175746	2R_10175746_SNP [dm3] 2R_14288241_SNP [dm6]	C	A	7.282e^-6	0.555	UTR_5_PRIME Ih UPSTREAM Ih INTRON Ih
3L	22697835	3L_22697835_SNP [dm3] 3L_22704735_SNP [dm6]	G	T	7.371e^-6	0.555	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	19108500	2R_19108500_SNP [dm3] 2R_23220977_SNP [dm6]	G	A	7.484e^-6	0.555	INTERGENIC	TF binding site mE1_TFBS_HSA
2R	10175774	2R_10175774_INS [dm3] 2R_14288269_INS [dm6]	G	GTTGCTAGTT	7.571e^-6	0.555	UPSTREAM Ih INTRON Ih
3L	7535717	3L_7535717_SNP [dm3] 3L_7542617_SNP [dm6]	C	T	7.647e^-6	0.555	UPSTREAM CG32376 INTERGENIC	TF binding site mE1_TFBS_HSA
3R	15871988	3R_15871988_SNP [dm3] 3R_20046266_SNP [dm6]	G	C	8.474e^-6	0.555	DOWNSTREAM Indy-2 INTRON CG17193 & 2 others	TF binding site mE1_TFBS_inv
2R	14372175	2R_14372175_SNP [dm3] 2R_18484670_SNP [dm6]	T	A	8.610e^-6	0.555	INTRON CG30116
3R	22291468	3R_22291468_SNP [dm3] 3R_26465746_SNP [dm6]	T	A	8.908e^-6	0.555	INTRON CG5455
3R	5744874	3R_5744874_SNP [dm3] 3R_9919152_SNP [dm6]	G	A	8.933e^-6	0.555	INTRON Glut4EF
2L	6760878	2L_6760878_SNP [dm3] 2L_6760878_SNP [dm6]	C	G	9.078e^-6	0.555	SYNONYMOUS_CODING CG11321	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	5860163	3L_5860163_SNP [dm3] 3L_5867063_SNP [dm6]	A	T	9.294e^-6	0.555	INTERGENIC
2R	16667773	2R_16667773_SNP [dm3] 2R_20780268_SNP [dm6]	T	G	9.492e^-6	0.555	UPSTREAM CG43711 DOWNSTREAM CR44666 INTERGENIC	TF binding site mE1_TFBS_sens
2R	16667893	2R_16667893_SNP [dm3] 2R_20780388_SNP [dm6]	A	G	9.782e^-6	0.555	UPSTREAM CG43711 EXON CR44666	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	10588236	3L_10588236_SNP [dm3] 3L_10595136_SNP [dm6]	C	T	9.880e^-6	0.555	INTERGENIC
3L	13240443	3L_13240443_SNP [dm3] 3L_13247343_SNP [dm6]	G	C	1.061e^-5	0.555	SYNONYMOUS_CODING CG32119 INTRON caps	TF binding site mE1_TFBS_HSA
2L	12137479	2L_12137479_SNP [dm3] 2L_12137479_SNP [dm6]	A	C	1.070e^-5	0.555	UPSTREAM Gr33a INTERGENIC
3L	16819814	3L_16819814_SNP [dm3] 3L_16826714_SNP [dm6]	G	T	1.096e^-5	0.555	INTRON CG13024
3L	7535975	3L_7535975_SNP [dm3] 3L_7542875_SNP [dm6]	C	G	1.144e^-5	0.555	UPSTREAM CG32376 INTERGENIC
3L	7535981	3L_7535981_SNP [dm3] 3L_7542881_SNP [dm6]	A	C	1.144e^-5	0.555	UPSTREAM CG32376 INTERGENIC
2R	7039004	2R_7039004_SNP [dm3] 2R_11151499_SNP [dm6]	C	T	1.144e^-5	0.555	INTRON CG13229
3L	5860174	3L_5860174_SNP [dm3] 3L_5867074_SNP [dm6]	C	A	1.162e^-5	0.555	INTERGENIC
2R	16667923	2R_16667923_SNP [dm3] 2R_20780418_SNP [dm6]	T	A	1.178e^-5	0.555	UPSTREAM CG43711 EXON CR44666	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	17908574	2R_17908574_DEL [dm3] 2R_22021069_DEL [dm6]	CC	C	1.201e^-5	0.555	INTRON CG34370
2R	16670126	2R_16670126_SNP [dm3] 2R_20782621_SNP [dm6]	G	A	1.262e^-5	0.555	INTERGENIC	TF binding site mE1_TFBS_sens
3L	870978	3L_870978_SNP [dm3] 3L_870978_SNP [dm6]	C	T	1.284e^-5	0.555	UTR_3_PRIME CG12502 UPSTREAM CG32479 DOWNSTREAM CG12502	TF binding site BDTNP1_TFBS_dl
X	6307731	X_6307731_SNP [dm3] X_6413698_SNP [dm6]	C	A	1.353e^-5	0.555	INTERGENIC
3L	7535965	3L_7535965_SNP [dm3] 3L_7542865_SNP [dm6]	C	T	1.375e^-5	0.555	UPSTREAM CG32376 INTERGENIC
2R	6994881	2R_6994881_INS [dm3] 2R_11107376_INS [dm6]	T	TTT	1.400e^-5	0.555	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	10588645	3L_10588645_DEL [dm3] 3L_10595545_DEL [dm6]	GG	G	1.414e^-5	0.555	INTERGENIC
3L	5701097	3L_5701097_SNP [dm3] 3L_5707997_SNP [dm6]	G	A	1.433e^-5	0.555	INTRON sif
2L	12137494	2L_12137494_SNP [dm3] 2L_12137494_SNP [dm6]	A	T	1.511e^-5	0.555	UPSTREAM Gr33a INTERGENIC
3L	12762278	3L_12762278_SNP [dm3] 3L_12769178_SNP [dm6]	A	T	1.523e^-5	0.555	SYNONYMOUS_CODING Hip1 DOWNSTREAM CG32113
2L	12338977	2L_12338977_SNP [dm3] 2L_12338977_SNP [dm6]	T	C	1.529e^-5	0.555	SYNONYMOUS_CODING CG31862
3L	7535318	3L_7535318_SNP [dm3] 3L_7542218_SNP [dm6]	C	T	1.533e^-5	0.555	SYNONYMOUS_CODING CG32376	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	6994584	2R_6994584_INS [dm3] 2R_11107079_INS [dm6]	A	ACATAC	1.560e^-5	0.555	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	16667884	2R_16667884_SNP [dm3] 2R_20780379_SNP [dm6]	A	G	1.622e^-5	0.555	UPSTREAM CG43711 EXON CR44666	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	5860140	3L_5860140_SNP [dm3] 3L_5867040_SNP [dm6]	G	A	1.628e^-5	0.555	INTERGENIC
2R	12391379	2R_12391379_SNP [dm3] 2R_16503874_SNP [dm6]	A	G	1.688e^-5	0.555	INTRON Sema-2a
2R	17564883	2R_17564883_SNP [dm3] 2R_21677378_SNP [dm6]	C	T	1.691e^-5	0.555	INTRON CG30263	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	2019736	3L_2019736_SNP [dm3] 3L_2019736_SNP [dm6]	T	A	1.723e^-5	0.555	DOWNSTREAM CG42357 INTERGENIC
2L	3262966	2L_3262966_SNP [dm3] 2L_3262966_SNP [dm6]	G	C	1.794e^-5	0.555	UPSTREAM CR45338 INTERGENIC
2L	21814989	2L_21814989_SNP [dm3] 2L_21814989_SNP [dm6]	T	A	1.799e^-5	0.555	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	17564861	2R_17564861_SNP [dm3] 2R_21677356_SNP [dm6]	C	T	1.853e^-5	0.555	INTRON CG30263	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	5860177	3L_5860177_SNP [dm3] 3L_5867077_SNP [dm6]	T	A	1.862e^-5	0.555	INTERGENIC
3R	21027492	3R_21027492_SNP [dm3] 3R_25201770_SNP [dm6]	T	A	1.877e^-5	0.555	INTRON CG13654 & 1 other
2L	9873821	2L_9873821_SNP [dm3] 2L_9873821_SNP [dm6]	G	A	1.907e^-5	0.555	INTRON nAChRalpha6
3R	10574990	3R_10574990_SNP [dm3] 3R_14749268_SNP [dm6]	T	G	1.946e^-5	0.555	UPSTREAM jvl & 1 other INTRON jvl & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_Trl
2R	12391377	2R_12391377_SNP [dm3] 2R_16503872_SNP [dm6]	A	G	1.978e^-5	0.555	INTRON Sema-2a
3R	16414174	3R_16414174_SNP [dm3] 3R_20588452_SNP [dm6]	A	C	2.001e^-5	0.555	UPSTREAM Srp72 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Ubx
3L	2695197	3L_2695197_SNP [dm3] 3L_2695197_SNP [dm6]	T	A	2.019e^-5	0.555	INTRON Fife
2R	16667900	2R_16667900_DEL [dm3] 2R_20780395_DEL [dm6]	GGAAT	G	2.031e^-5	0.555	UPSTREAM CG43711 EXON CR44666	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	16665509	2R_16665509_SNP [dm3] 2R_20778004_SNP [dm6]	A	C	2.036e^-5	0.555	UPSTREAM CG43710 DOWNSTREAM CG43711 INTERGENIC
2R	19159998	2R_19159998_SNP [dm3] 2R_23272475_SNP [dm6]	C	T	2.098e^-5	0.555	INTRON ord
3L	5860241	3L_5860241_SNP [dm3] 3L_5867141_SNP [dm6]	T	A	2.146e^-5	0.555	INTERGENIC
2R	10820945	2R_10820945_SNP [dm3] 2R_14933440_SNP [dm6]	T	A	2.155e^-5	0.555	UPSTREAM CG12853 & 1 other INTRON CG10253	TF binding site mE1_TFBS_Trl
3L	7535848	3L_7535848_SNP [dm3] 3L_7542748_SNP [dm6]	A	G	2.158e^-5	0.555	UPSTREAM CG32376 INTERGENIC
3L	8222783	3L_8222783_SNP [dm3] 3L_8229683_SNP [dm6]	G	A	2.176e^-5	0.555	SYNONYMOUS_CODING eIF4E-3
2R	17635907	2R_17635907_SNP [dm3] 2R_21748402_SNP [dm6]	G	C	2.184e^-5	0.555	INTERGENIC
3L	2694765	3L_2694765_SNP [dm3] 3L_2694765_SNP [dm6]	T	C	2.207e^-5	0.555	INTRON Fife
2R	7121606	2R_7121606_SNP [dm3] 2R_11234101_SNP [dm6]	C	T	2.238e^-5	0.555	SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
2L	9873856	2L_9873856_SNP [dm3] 2L_9873856_SNP [dm6]	A	G	2.291e^-5	0.555	INTRON nAChRalpha6
2L	9873958	2L_9873958_SNP [dm3] 2L_9873958_SNP [dm6]	A	G	2.328e^-5	0.555	INTRON nAChRalpha6
2L	6321601	2L_6321601_SNP [dm3] 2L_6321601_SNP [dm6]	A	C	2.346e^-5	0.555	INTRON Ddr
2L	16108420	2L_16108420_SNP [dm3] 2L_16108420_SNP [dm6]	G	C	2.386e^-5	0.555	INTERGENIC
3L	5860192	3L_5860192_SNP [dm3] 3L_5867092_SNP [dm6]	T	A	2.415e^-5	0.555	INTERGENIC
3L	11702873	3L_11702873_SNP [dm3] 3L_11709773_SNP [dm6]	C	A	2.485e^-5	0.555	NON_SYNONYMOUS_CODING mtTFB1 UTR_3_PRIME Ccdc56 DOWNSTREAM crim	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	12762449	3L_12762449_SNP [dm3] 3L_12769349_SNP [dm6]	A	G	2.499e^-5	0.555	SYNONYMOUS_CODING Hip1 DOWNSTREAM CG32113
2L	16107548	2L_16107548_SNP [dm3] 2L_16107548_SNP [dm6]	C	G	2.504e^-5	0.555	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	7535979	3L_7535979_SNP [dm3] 3L_7542879_SNP [dm6]	A	G	2.527e^-5	0.555	UPSTREAM CG32376 INTERGENIC
2R	13516549	2R_13516549_SNP [dm3] 2R_17629044_SNP [dm6]	G	A	2.590e^-5	0.555	INTRON CG10936 & 1 other
2L	12339589	2L_12339589_SNP [dm3] 2L_12339589_SNP [dm6]	T	G	2.625e^-5	0.555	DOWNSTREAM CG31862 INTERGENIC
2R	6994275	2R_6994275_SNP [dm3] 2R_11106770_SNP [dm6]	G	T	2.637e^-5	0.555	UTR_5_PRIME luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	6994880	2R_6994880_SNP [dm3] 2R_11107375_SNP [dm6]	A	T	2.702e^-5	0.555	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	12340371	2L_12340371_SNP [dm3] 2L_12340371_SNP [dm6]	A	T	2.787e^-5	0.555	DOWNSTREAM CG31862 INTERGENIC
2R	14372385	2R_14372385_SNP [dm3] 2R_18484880_SNP [dm6]	A	T	2.806e^-5	0.555	INTRON CG30116
2R	17087840	2R_17087840_SNP [dm3] 2R_21200335_SNP [dm6]	C	G	2.816e^-5	0.555	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3L	9935845	3L_9935845_SNP [dm3] 3L_9942745_SNP [dm6]	G	C	2.861e^-5	0.555	INTRON CG34356
2R	16667721	2R_16667721_SNP [dm3] 2R_20780216_SNP [dm6]	G	A	2.872e^-5	0.555	UPSTREAM CG43711 DOWNSTREAM CR44666 INTERGENIC	TF binding site mE1_TFBS_sens
2R	17098498	2R_17098498_SNP [dm3] 2R_21210993_SNP [dm6]	G	A	2.873e^-5	0.555	UTR_5_PRIME CG44245 DOWNSTREAM Glycogenin INTRON CG44245
3R	7710536	3R_7710536_SNP [dm3] 3R_11884814_SNP [dm6]	G	T	2.904e^-5	0.555	SYNONYMOUS_CODING mthl5 INTRON CG31368
3L	5845082	3L_5845082_SNP [dm3] 3L_5851982_SNP [dm6]	G	A	2.917e^-5	0.555	INTERGENIC
3R	15476854	3R_15476854_SNP [dm3] 3R_19651132_SNP [dm6]	C	A	2.920e^-5	0.555	START_GAINED CG31219 UTR_5_PRIME CG31219 DOWNSTREAM CG31220 INTRON CG31219
2R	18328661	2R_18328661_SNP [dm3] 2R_22441156_SNP [dm6]	T	C	2.952e^-5	0.555	INTERGENIC
3L	18328264	3L_18328264_SNP [dm3] 3L_18335164_SNP [dm6]	G	C	3.000e^-5	0.555	INTERGENIC
3L	8018293	3L_8018293_INS [dm3] 3L_8025193_INS [dm6]	T	TCTGTT	3.037e^-5	0.555	INTRON nmo
2R	7005107	2R_7005107_SNP [dm3] 2R_11117602_SNP [dm6]	C	T	3.043e^-5	0.555	UTR_3_PRIME Cyp12d1-p
3R	7712779	3R_7712779_SNP [dm3] 3R_11887057_SNP [dm6]	T	C	3.077e^-5	0.555	UTR_5_PRIME mthl5 INTRON CG31368	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_en mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	19159952	2R_19159952_SNP [dm3] 2R_23272429_SNP [dm6]	G	T	3.110e^-5	0.555	INTRON ord
2R	10812973	2R_10812973_SNP [dm3] 2R_14925468_SNP [dm6]	G	A	3.132e^-5	0.555	INTRON CG10249	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	13777246	3L_13777246_SNP [dm3] 3L_13784146_SNP [dm6]	A	T	3.145e^-5	0.555	INTRON bru-3
3L	10588484	3L_10588484_INS [dm3] 3L_10595384_INS [dm6]	T	TT	3.166e^-5	0.555	INTERGENIC
3L	2019760	3L_2019760_SNP [dm3] 3L_2019760_SNP [dm6]	C	T	3.168e^-5	0.555	DOWNSTREAM CG42357 INTERGENIC
2L	12339481	2L_12339481_SNP [dm3] 2L_12339481_SNP [dm6]	C	A	3.321e^-5	0.571	DOWNSTREAM CG31862 INTERGENIC
2R	16667474	2R_16667474_INS [dm3] 2R_20779969_INS [dm6]	A	AAG	3.337e^-5	0.571	UPSTREAM CG43711 DOWNSTREAM CR44666 INTERGENIC
2L	9393479	2L_9393479_SNP [dm3] 2L_9393479_SNP [dm6]	C	G	3.348e^-5	0.571	INTRON Shawl
2R	17088175	2R_17088175_SNP [dm3] 2R_21200670_SNP [dm6]	C	T	3.438e^-5	0.571	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	11390402	3R_11390402_SNP [dm3] 3R_15564680_SNP [dm6]	T	C	3.449e^-5	0.571	INTERGENIC
2R	19689430	2R_19689430_SNP [dm3] 2R_23801907_SNP [dm6]	C	A	3.470e^-5	0.571	NON_SYNONYMOUS_CODING CG30177	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	27281756	3R_27281756_SNP [dm3] 3R_31456034_SNP [dm6]	G	T	3.472e^-5	0.571	INTRON Gprk2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	6999236	2R_6999236_SNP [dm3] 2R_11111731_SNP [dm6]	A	T	3.531e^-5	0.573	INTRON luna	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12339554	2L_12339554_SNP [dm3] 2L_12339554_SNP [dm6]	C	A	3.570e^-5	0.573	DOWNSTREAM CG31862 INTERGENIC
3R	22292576	3R_22292576_SNP [dm3] 3R_26466854_SNP [dm6]	A	G	3.576e^-5	0.573	NON_SYNONYMOUS_CODING CG5455
2L	7263994	2L_7263994_SNP [dm3] 2L_7263994_SNP [dm6]	C	T	3.634e^-5	0.578	INTRON Wnt4	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	5839105	3L_5839105_SNP [dm3] 3L_5846005_SNP [dm6]	A	T	3.723e^-5	0.578	UPSTREAM vn INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
X	21353413	X_21353413_SNP [dm3] X_21482386_SNP [dm6]	A	G	3.743e^-5	0.578	DOWNSTREAM CR45511 INTERGENIC
3L	8019989	3L_8019989_SNP [dm3] 3L_8026889_SNP [dm6]	G	A	3.744e^-5	0.578	INTRON nmo
3L	3369991	3L_3369991_SNP [dm3] 3L_3369991_SNP [dm6]	A	T	3.763e^-5	0.578	DOWNSTREAM YT521-B & 1 other INTERGENIC
X	3458743	X_3458743_SNP [dm3] X_3564710_SNP [dm6]	C	A	3.892e^-5	0.581	INTRON CG32791 & 1 other
2L	18106593	2L_18106593_SNP [dm3] 2L_18106593_SNP [dm6]	A	C	3.911e^-5	0.581	INTERGENIC
2L	12339508	2L_12339508_INS [dm3] 2L_12339508_INS [dm6]	A	ACATA	3.976e^-5	0.581	DOWNSTREAM CG31862 INTERGENIC
3L	8018377	3L_8018377_SNP [dm3] 3L_8025277_SNP [dm6]	T	C	4.037e^-5	0.581	INTRON nmo
2R	17428709	2R_17428709_SNP [dm3] 2R_21541204_SNP [dm6]	C	T	4.062e^-5	0.581	UPSTREAM CG30283 INTRON Egfr	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	7711956	3R_7711956_SNP [dm3] 3R_11886234_SNP [dm6]	A	G	4.125e^-5	0.581	INTRON CG31368 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens mE1_TFBS_Trl
X	16148529	X_16148529_SNP [dm3] X_16254496_SNP [dm6]	C	T	4.139e^-5	0.581	UPSTREAM snRNA:U2:14B & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	15682932	2R_15682932_SNP [dm3] 2R_19795427_SNP [dm6]	T	G	4.146e^-5	0.581	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	6743626	3R_6743626_SNP [dm3] 3R_10917904_SNP [dm6]	C	T	4.170e^-5	0.581	INTERGENIC
2R	17098670	2R_17098670_SNP [dm3] 2R_21211165_SNP [dm6]	A	G	4.180e^-5	0.581	UTR_5_PRIME CG44245 DOWNSTREAM Glycogenin INTRON CG44245
2R	17635862	2R_17635862_SNP [dm3] 2R_21748357_SNP [dm6]	A	G	4.221e^-5	0.581	INTERGENIC
2L	17191496	2L_17191496_INS [dm3] 2L_17191496_INS [dm6]	A	AA	4.238e^-5	0.581	INTRON beat-IIIc
2R	10820980	2R_10820980_SNP [dm3] 2R_14933475_SNP [dm6]	A	T	4.265e^-5	0.581	UPSTREAM CG12853 & 1 other INTRON CG10253	TF binding site mE1_TFBS_Trl
2R	7121593	2R_7121593_SNP [dm3] 2R_11234088_SNP [dm6]	A	G	4.269e^-5	0.581	NON_SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
3L	3566104	3L_3566104_SNP [dm3] 3L_3566104_SNP [dm6]	G	C	4.280e^-5	0.581	INTRON Eip63E
3L	1286059	3L_1286059_INS [dm3] 3L_1286059_INS [dm6]	G	CACTTTGGAGATC...	4.304e^-5	0.581	INTRON CG32333
2R	10746284	2R_10746284_SNP [dm3] 2R_14858779_SNP [dm6]	C	A	4.310e^-5	0.581	UPSTREAM CG33506 DOWNSTREAM U3-55K INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
3L	12641483	3L_12641483_SNP [dm3] 3L_12648383_SNP [dm6]	G	C	4.524e^-5	0.6	DOWNSTREAM CR43431 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
2R	13516550	2R_13516550_SNP [dm3] 2R_17629045_SNP [dm6]	T	C	4.548e^-5	0.6	INTRON CG10936 & 1 other
3L	1282686	3L_1282686_SNP [dm3] 3L_1282686_SNP [dm6]	C	T	4.566e^-5	0.6	INTRON CG32333
3L	2019712	3L_2019712_SNP [dm3] 3L_2019712_SNP [dm6]	T	C	4.594e^-5	0.6	DOWNSTREAM CG42357 INTERGENIC
2R	15129621	2R_15129621_SNP [dm3] 2R_19242116_SNP [dm6]	T	C	4.666e^-5	0.6	INTRON cora
2R	10746159	2R_10746159_SNP [dm3] 2R_14858654_SNP [dm6]	A	T	4.675e^-5	0.6	UPSTREAM CG33506 DOWNSTREAM U3-55K INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	9873867	2L_9873867_SNP [dm3] 2L_9873867_SNP [dm6]	T	G	4.720e^-5	0.6	INTRON nAChRalpha6
3R	15478570	3R_15478570_SNP [dm3] 3R_19652848_SNP [dm6]	T	C	4.743e^-5	0.6	SYNONYMOUS_CODING CG6184 DOWNSTREAM CG31219	TF binding site mE1_TFBS_chinmo
2R	11979897	2R_11979897_SNP [dm3] 2R_16092392_SNP [dm6]	C	T	4.777e^-5	0.6	INTRON Dg	TF binding site mE1_TFBS_HSA
3R	22139517	3R_22139517_SNP [dm3] 3R_26313795_SNP [dm6]	G	C	4.802e^-5	0.6	INTERGENIC
2R	15117188	2R_15117188_SNP [dm3] 2R_19229683_SNP [dm6]	G	C	4.933e^-5	0.6	INTRON cora	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	9935539	3L_9935539_SNP [dm3] 3L_9942439_SNP [dm6]	C	T	4.934e^-5	0.6	INTRON CG34356
3L	9935549	3L_9935549_SNP [dm3] 3L_9942449_SNP [dm6]	T	C	4.934e^-5	0.6	INTRON CG34356
X	21353374	X_21353374_SNP [dm3] X_21482347_SNP [dm6]	A	G	4.943e^-5	0.6	DOWNSTREAM CR45511 INTERGENIC
2L	12339516	2L_12339516_SNP [dm3] 2L_12339516_SNP [dm6]	G	A	4.980e^-5	0.6	DOWNSTREAM CG31862 INTERGENIC
3R	11484008	3R_11484008_SNP [dm3] 3R_15658286_SNP [dm6]	T	C	5.017e^-5	0.6	INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	16633292	X_16633292_SNP [dm3] X_16739259_SNP [dm6]	A	C	5.064e^-5	0.6	DOWNSTREAM TwdlZ INTRON CG9634
2R	7031179	2R_7031179_SNP [dm3] 2R_11143674_SNP [dm6]	C	T	5.115e^-5	0.6	UPSTREAM CG13229 INTRON CG13229
3L	5701147	3L_5701147_SNP [dm3] 3L_5708047_SNP [dm6]	A	G	5.140e^-5	0.6	INTRON sif
2R	13516172	2R_13516172_SNP [dm3] 2R_17628667_SNP [dm6]	T	A	5.146e^-5	0.6	UTR_3_PRIME rhi INTRON CG10936
2L	12340510	2L_12340510_SNP [dm3] 2L_12340510_SNP [dm6]	G	A	5.164e^-5	0.6	INTERGENIC
3L	11570162	3L_11570162_SNP [dm3] 3L_11577062_SNP [dm6]	T	G	5.183e^-5	0.6	UTR_3_PRIME CG33271 UPSTREAM CG33489
X	8180592	X_8180592_SNP [dm3] X_8286559_SNP [dm6]	C	T	5.187e^-5	0.6	INTRON nAChRalpha3
2L	11192312	2L_11192312_SNP [dm3] 2L_11192312_SNP [dm6]	A	C	5.246e^-5	0.602	INTRON Ca-beta
2L	6807448	2L_6807448_INS [dm3] 2L_6807448_INS [dm6]	T	TT	5.263e^-5	0.602	INTERGENIC
2R	7030387	2R_7030387_SNP [dm3] 2R_11142882_SNP [dm6]	C	T	5.348e^-5	0.603	SYNONYMOUS_CODING CG13229
2L	12339489	2L_12339489_SNP [dm3] 2L_12339489_SNP [dm6]	C	T	5.352e^-5	0.603	DOWNSTREAM CG31862 INTERGENIC
2L	13287042	2L_13287042_SNP [dm3] 2L_13287042_SNP [dm6]	C	T	5.367e^-5	0.603	NON_SYNONYMOUS_CODING Uvrag UPSTREAM Drep-4 DOWNSTREAM CR44083	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	4657320	2R_4657320_DEL [dm3] 2R_8769815_DEL [dm6]	GCCTTACGAAG...	G	5.493e^-5	0.608	INTERGENIC
2R	16665531	2R_16665531_INS [dm3] 2R_20778026_INS [dm6]	G	GTTTAG	5.541e^-5	0.608	UPSTREAM CG43710 DOWNSTREAM CG43711 INTERGENIC
X	16531653	X_16531653_SNP [dm3] X_16637620_SNP [dm6]	T	G	5.570e^-5	0.608	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	16531669	X_16531669_SNP [dm3] X_16637636_SNP [dm6]	C	T	5.570e^-5	0.608	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2R	17089857	2R_17089857_SNP [dm3] 2R_21202352_SNP [dm6]	A	C	5.581e^-5	0.608	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	16531795	X_16531795_SNP [dm3] X_16637762_SNP [dm6]	A	G	5.609e^-5	0.608	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2L	12137439	2L_12137439_SNP [dm3] 2L_12137439_SNP [dm6]	G	T	5.647e^-5	0.608	UPSTREAM Gr33a INTERGENIC
2L	20171972	2L_20171972_SNP [dm3] 2L_20171972_SNP [dm6]	C	G	5.693e^-5	0.608	INTERGENIC	transposable element FlyBase
2R	7121591	2R_7121591_SNP [dm3] 2R_11234086_SNP [dm6]	G	A	5.883e^-5	0.608	SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
X	16531702	X_16531702_SNP [dm3] X_16637669_SNP [dm6]	G	A	5.890e^-5	0.608	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2L	6140063	2L_6140063_SNP [dm3] 2L_6140063_SNP [dm6]	G	A	5.977e^-5	0.608	NON_SYNONYMOUS_CODING CG13991 UPSTREAM CR44824	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	16531635	X_16531635_SNP [dm3] X_16637602_SNP [dm6]	T	G	6.000e^-5	0.608	UPSTREAM RpS19a & 1 other INTERGENIC	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
X	16531636	X_16531636_SNP [dm3] X_16637603_SNP [dm6]	A	T	6.000e^-5	0.608	UPSTREAM RpS19a & 1 other INTERGENIC	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	7535783	3L_7535783_SNP [dm3] 3L_7542683_SNP [dm6]	A	T	6.017e^-5	0.608	UPSTREAM CG32376 INTERGENIC	TF binding site mE1_TFBS_HSA
2R	10795500	2R_10795500_DEL [dm3] 2R_14907995_DEL [dm6]	CC	C	6.062e^-5	0.608	UPSTREAM CG10249 INTRON CG10249	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	15097969	2L_15097969_SNP [dm3] 2L_15097969_SNP [dm6]	G	A	6.078e^-5	0.608	INTERGENIC	TF binding site mE1_TFBS_inv
2L	8541883	2L_8541883_INS [dm3] 2L_8541883_INS [dm6]	T	TAT	6.098e^-5	0.608	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3R	16225467	3R_16225467_SNP [dm3] 3R_20399745_SNP [dm6]	G	T	6.125e^-5	0.608	NON_SYNONYMOUS_CODING Gfrl DOWNSTREAM Gfrl INTRON Gfrl	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15839063	3R_15839063_SNP [dm3] 3R_20013341_SNP [dm6]	T	A	6.133e^-5	0.608	UPSTREAM CG4836 INTRON CG17190
2L	15005121	2L_15005121_SNP [dm3] 2L_15005121_SNP [dm6]	C	G	6.158e^-5	0.608	UPSTREAM dyn-p25 INTERGENIC
2L	11246944	2L_11246944_DEL [dm3] 2L_11246944_DEL [dm6]	TGAAAGTTTAGAT...	T	6.196e^-5	0.608	INTRON ab
2R	18001321	2R_18001321_SNP [dm3] 2R_22113816_SNP [dm6]	G	A	6.318e^-5	0.608	INTRON Vrp1 & 1 other
2R	17089742	2R_17089742_SNP [dm3] 2R_21202237_SNP [dm6]	A	T	6.390e^-5	0.608	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	24161353	3R_24161353_SNP [dm3] 3R_28335631_SNP [dm6]	A	T	6.397e^-5	0.608	UPSTREAM larp INTRON larp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2L	9390518	2L_9390518_SNP [dm3] 2L_9390518_SNP [dm6]	T	G	6.412e^-5	0.608	SYNONYMOUS_CODING Aldh INTRON Shawl	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	14912851	3R_14912851_SNP [dm3] 3R_19087129_SNP [dm6]	C	A	6.442e^-5	0.608	INTRON cdi	TF binding site mE1_TFBS_chinmo
2L	8541878	2L_8541878_INS [dm3] 2L_8541878_INS [dm6]	A	AC	6.489e^-5	0.608	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
2L	12340368	2L_12340368_SNP [dm3] 2L_12340368_SNP [dm6]	G	A	6.492e^-5	0.608	DOWNSTREAM CG31862 INTERGENIC
3L	7246266	3L_7246266_SNP [dm3] 3L_7253166_SNP [dm6]	G	T	6.514e^-5	0.608	DOWNSTREAM CR43470 INTRON CG14830
3L	3786596	3L_3786596_SNP [dm3] 3L_3786596_SNP [dm6]	A	T	6.520e^-5	0.608	INTRON CG32264	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
3L	7535518	3L_7535518_SNP [dm3] 3L_7542418_SNP [dm6]	T	C	6.523e^-5	0.608	NON_SYNONYMOUS_CODING CG32376	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	5861530	3L_5861530_SNP [dm3] 3L_5868430_SNP [dm6]	G	T	6.670e^-5	0.608	INTERGENIC
3R	16516528	3R_16516528_SNP [dm3] 3R_20690806_SNP [dm6]	A	G	6.676e^-5	0.608	SYNONYMOUS_CODING Oamb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	16376304	2R_16376304_SNP [dm3] 2R_20488799_SNP [dm6]	G	T	6.678e^-5	0.608	INTERGENIC
2L	12340502	2L_12340502_SNP [dm3] 2L_12340502_SNP [dm6]	G	A	6.678e^-5	0.608	INTERGENIC
3L	2695326	3L_2695326_SNP [dm3] 3L_2695326_SNP [dm6]	G	A	6.741e^-5	0.608	INTRON Fife
2R	7031169	2R_7031169_SNP [dm3] 2R_11143664_SNP [dm6]	T	C	6.742e^-5	0.608	UTR_5_PRIME CG13229 INTRON CG13229
2L	9614552	2L_9614552_SNP [dm3] 2L_9614552_SNP [dm6]	T	C	6.766e^-5	0.608	INTRON Trx-2	TF binding site BDTNP1_TFBS_dl
2L	8541872	2L_8541872_SNP [dm3] 2L_8541872_SNP [dm6]	T	C	6.796e^-5	0.608	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	9873818	2L_9873818_SNP [dm3] 2L_9873818_SNP [dm6]	G	A	6.816e^-5	0.608	INTRON nAChRalpha6
X	8291549	X_8291549_SNP [dm3] X_8397516_SNP [dm6]	A	C	6.841e^-5	0.608	NON_SYNONYMOUS_CODING CG15345
2R	10722446	2R_10722446_SNP [dm3] 2R_14834941_SNP [dm6]	C	T	6.861e^-5	0.608	DOWNSTREAM CG10205 INTERGENIC
2L	9391226	2L_9391226_SNP [dm3] 2L_9391226_SNP [dm6]	C	T	6.864e^-5	0.608	SYNONYMOUS_CODING Aldh INTRON Shawl
3L	3625946	3L_3625946_SNP [dm3] 3L_3625946_SNP [dm6]	T	A	6.871e^-5	0.608	UPSTREAM dar1 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	19287695	2R_19287695_SNP [dm3] 2R_23400172_SNP [dm6]	C	T	6.872e^-5	0.608	SYNONYMOUS_CODING CG3520	TF binding site mE1_TFBS_chinmo
3L	8019557	3L_8019557_SNP [dm3] 3L_8026457_SNP [dm6]	T	G	6.943e^-5	0.608	INTRON nmo
3L	5861411	3L_5861411_SNP [dm3] 3L_5868311_SNP [dm6]	A	G	6.960e^-5	0.608	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	9873918	2L_9873918_SNP [dm3] 2L_9873918_SNP [dm6]	T	C	6.967e^-5	0.608	INTRON nAChRalpha6
3R	10999043	3R_10999043_SNP [dm3] 3R_15173321_SNP [dm6]	T	G	7.023e^-5	0.609	DOWNSTREAM Mf INTRON Mf & 1 other
2R	19689233	2R_19689233_SNP [dm3] 2R_23801710_SNP [dm6]	A	T	7.050e^-5	0.609	NON_SYNONYMOUS_CODING CG30177	TF binding site mE1_TFBS_sens
3L	1286335	3L_1286335_SNP [dm3] 3L_1286335_SNP [dm6]	G	A	7.140e^-5	0.609	INTRON CG32333
3L	8022396	3L_8022396_SNP [dm3] 3L_8029296_SNP [dm6]	C	A	7.197e^-5	0.609	UPSTREAM tRNA:CR32370 INTRON nmo	regulatory region REDfly_CRMs TF binding site mE1_TFBS_sens
3L	8019166	3L_8019166_DEL [dm3] 3L_8026066_DEL [dm6]	CAC	C	7.272e^-5	0.609	INTRON nmo
2L	12339479	2L_12339479_SNP [dm3] 2L_12339479_SNP [dm6]	A	C	7.280e^-5	0.609	DOWNSTREAM CG31862 INTERGENIC
3R	23486869	3R_23486869_SNP [dm3] 3R_27661147_SNP [dm6]	A	T	7.371e^-5	0.609	UPSTREAM Mlc1 INTERGENIC
2L	9396505	2L_9396505_SNP [dm3] 2L_9396505_SNP [dm6]	A	G	7.379e^-5	0.609	DOWNSTREAM CG4438 INTRON Shawl
2R	10820957	2R_10820957_SNP [dm3] 2R_14933452_SNP [dm6]	A	C	7.408e^-5	0.609	UPSTREAM CG12853 & 1 other INTRON CG10253	TF binding site mE1_TFBS_Trl
3R	16898290	3R_16898290_SNP [dm3] 3R_21072568_SNP [dm6]	C	G	7.422e^-5	0.609	SYNONYMOUS_CODING r-l	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	11117578	3L_11117578_SNP [dm3] 3L_11124478_SNP [dm6]	T	G	7.430e^-5	0.609	INTRON CG42575	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl
X	629896	X_629896_SNP [dm3] X_735863_SNP [dm6]	C	A	7.431e^-5	0.609	INTRON sdk
X	14758075	X_14758075_SNP [dm3] X_14864042_SNP [dm6]	T	C	7.488e^-5	0.609	NON_SYNONYMOUS_CODING CG9518 INTRON Flo2
3R	19028180	3R_19028180_SNP [dm3] 3R_23202458_SNP [dm6]	G	A	7.494e^-5	0.609	SYNONYMOUS_CODING fzo INTRON cnc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens
3L	7693385	3L_7693385_SNP [dm3] 3L_7700285_SNP [dm6]	C	T	7.519e^-5	0.609	SYNONYMOUS_CODING Ank2 INTRON CG32373
2R	6999812	2R_6999812_SNP [dm3] 2R_11112307_SNP [dm6]	A	G	7.538e^-5	0.609	INTRON luna
3R	17140229	3R_17140229_SNP [dm3] 3R_21314507_SNP [dm6]	A	T	7.541e^-5	0.609	EXON Hsromega
3R	14415807	3R_14415807_SNP [dm3] 3R_18590085_SNP [dm6]	C	T	7.630e^-5	0.609	UTR_5_PRIME CG7694 UPSTREAM qin DOWNSTREAM fray INTRON CG7694
3R	9276755	3R_9276755_SNP [dm3] 3R_13451033_SNP [dm6]	T	G	7.703e^-5	0.609	INTRON CG14372	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3L	2697469	3L_2697469_SNP [dm3] 3L_2697469_SNP [dm6]	A	T	7.742e^-5	0.609	INTRON Fife
3L	8031210	3L_8031210_SNP [dm3] 3L_8038110_SNP [dm6]	C	T	7.752e^-5	0.609	INTRON nmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
3L	17219120	3L_17219120_SNP [dm3] 3L_17226020_SNP [dm6]	A	G	7.784e^-5	0.609	INTRON Rbp6
3L	7300053	3L_7300053_SNP [dm3] 3L_7306953_SNP [dm6]	G	A	7.939e^-5	0.609	INTRON unc-13-4A
X	12401735	X_12401735_SNP [dm3] X_12507702_SNP [dm6]	A	G	7.971e^-5	0.609	INTRON CG2556	TF binding site BDTNP1_TFBS_da
3L	7535084	3L_7535084_SNP [dm3] 3L_7541984_SNP [dm6]	G	A	7.990e^-5	0.609	SYNONYMOUS_CODING CG32376 UPSTREAM CG32374	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15476849	3R_15476849_SNP [dm3] 3R_19651127_SNP [dm6]	T	G	7.994e^-5	0.609	UTR_5_PRIME CG31219 DOWNSTREAM CG31220 INTRON CG31219
3L	8018261	3L_8018261_DEL [dm3] 3L_8025161_DEL [dm6]	TT	T	8.038e^-5	0.609	INTRON nmo
3L	12763558	3L_12763558_SNP [dm3] 3L_12770458_SNP [dm6]	T	A	8.040e^-5	0.609	NON_SYNONYMOUS_CODING Hip1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	4416638	X_4416638_SNP [dm3] X_4522605_SNP [dm6]	C	T	8.077e^-5	0.609	INTRON CR32773
2R	17089819	2R_17089819_SNP [dm3] 2R_21202314_SNP [dm6]	A	G	8.097e^-5	0.609	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	16531673	X_16531673_SNP [dm3] X_16637640_SNP [dm6]	C	T	8.161e^-5	0.609	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	16531676	X_16531676_SNP [dm3] X_16637643_SNP [dm6]	T	G	8.161e^-5	0.609	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2L	9381846	2L_9381846_SNP [dm3] 2L_9381846_SNP [dm6]	G	A	8.209e^-5	0.609	INTRON Shawl
3R	16753169	3R_16753169_SNP [dm3] 3R_20927447_SNP [dm6]	C	T	8.211e^-5	0.609	SYNONYMOUS_CODING hdly INTRON CG31191
2R	19690055	2R_19690055_SNP [dm3] 2R_23802532_SNP [dm6]	A	G	8.222e^-5	0.609	UTR_3_PRIME CG30177
2R	15747949	2R_15747949_SNP [dm3] 2R_19860444_SNP [dm6]	G	A	8.304e^-5	0.609	UPSTREAM CR44570 INTRON CR44571
3R	27173347	3R_27173347_SNP [dm3] 3R_31347625_SNP [dm6]	T	C	8.305e^-5	0.609	INTRON CG34347
3R	11484014	3R_11484014_SNP [dm3] 3R_15658292_SNP [dm6]	C	T	8.308e^-5	0.609	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	24771179	3R_24771179_SNP [dm3] 3R_28945457_SNP [dm6]	T	G	8.312e^-5	0.609	INTRON CG14521
2L	14012242	2L_14012242_INS [dm3] 2L_14012242_INS [dm6]	A	AGCGAATGTA	8.320e^-5	0.609	UPSTREAM bgm INTERGENIC	TF binding site mE1_TFBS_inv
2L	15118635	2L_15118635_SNP [dm3] 2L_15118635_SNP [dm6]	C	G	8.352e^-5	0.609	DOWNSTREAM stc INTERGENIC
2R	17089852	2R_17089852_SNP [dm3] 2R_21202347_SNP [dm6]	A	T	8.363e^-5	0.609	INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	2560217	3L_2560217_SNP [dm3] 3L_2560217_SNP [dm6]	G	A	8.412e^-5	0.609	SYNONYMOUS_CODING msn
3L	4924635	3L_4924635_SNP [dm3] 3L_4924635_SNP [dm6]	G	T	8.412e^-5	0.609	INTERGENIC
3L	1286947	3L_1286947_SNP [dm3] 3L_1286947_SNP [dm6]	T	A	8.474e^-5	0.611	INTRON CG32333
2R	18339405	2R_18339405_SNP [dm3] 2R_22451900_SNP [dm6]	G	C	8.632e^-5	0.615	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	9924871	2R_9924871_SNP [dm3] 2R_14037366_SNP [dm6]	G	A	8.635e^-5	0.615	INTRON mam	TF binding site mE1_TFBS_HSA
2L	9405736	2L_9405736_SNP [dm3] 2L_9405736_SNP [dm6]	A	C	8.664e^-5	0.615	INTRON Shawl
3R	26359142	3R_26359142_SNP [dm3] 3R_30533420_SNP [dm6]	G	A	8.664e^-5	0.615	SYNONYMOUS_CODING tmod
2R	7003771	2R_7003771_SNP [dm3] 2R_11116266_SNP [dm6]	A	G	8.740e^-5	0.618	UTR_5_PRIME luna DOWNSTREAM Cyp12d1-p	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	10524140	2R_10524140_SNP [dm3] 2R_14636635_SNP [dm6]	C	T	8.841e^-5	0.623	INTERGENIC
3L	14075433	3L_14075433_SNP [dm3] 3L_14082333_SNP [dm6]	G	A	8.970e^-5	0.63	SYNONYMOUS_CODING btl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	14757166	X_14757166_SNP [dm3] X_14863133_SNP [dm6]	C	A	9.105e^-5	0.637	UTR_3_PRIME CG9518 INTRON Flo2
2L	12137442	2L_12137442_SNP [dm3] 2L_12137442_SNP [dm6]	G	C	9.211e^-5	0.638	UPSTREAM Gr33a INTERGENIC
3R	9310326	3R_9310326_SNP [dm3] 3R_13484604_SNP [dm6]	C	G	9.238e^-5	0.638	INTERGENIC
2L	8541730	2L_8541730_SNP [dm3] 2L_8541730_SNP [dm6]	G	A	9.266e^-5	0.638	UPSTREAM tRNA:CR31603 & 2 others DOWNSTREAM CG17834 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	14912831	3R_14912831_SNP [dm3] 3R_19087109_SNP [dm6]	C	T	9.310e^-5	0.638	INTRON cdi	TF binding site mE1_TFBS_chinmo
3L	12064527	3L_12064527_SNP [dm3] 3L_12071427_SNP [dm6]	G	T	9.315e^-5	0.638	INTRON Sema-5c	TF binding site mE1_TFBS_chinmo
3L	2743331	3L_2743331_SNP [dm3] 3L_2743331_SNP [dm6]	A	T	9.341e^-5	0.638	INTRON Mrtf
2R	960291	2R_960291_SNP [dm3] 2R_5072786_SNP [dm6]	C	G	9.384e^-5	0.638	INTERGENIC
2R	7150870	2R_7150870_SNP [dm3] 2R_11263365_SNP [dm6]	C	T	9.391e^-5	0.638	INTERGENIC
3R	16516459	3R_16516459_SNP [dm3] 3R_20690737_SNP [dm6]	T	C	9.467e^-5	0.641	SYNONYMOUS_CODING Oamb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	7031256	2R_7031256_SNP [dm3] 2R_11143751_SNP [dm6]	A	T	9.500e^-5	0.641	UPSTREAM CG13229 INTRON CG13229
2L	9805674	2L_9805674_SNP [dm3] 2L_9805674_SNP [dm6]	T	C	9.600e^-5	0.642	INTRON nAChRalpha6	TF binding site mE1_TFBS_sens
2R	3902910	2R_3902910_SNP [dm3] 2R_8015405_SNP [dm6]	G	A	9.626e^-5	0.642	DOWNSTREAM mir-4981 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	16557874	2R_16557874_SNP [dm3] 2R_20670369_SNP [dm6]	A	G	9.642e^-5	0.642	UTR_5_PRIME exu UPSTREAM CG30152	TF binding site BDTNP1_TFBS_dl
2R	9924958	2R_9924958_SNP [dm3] 2R_14037453_SNP [dm6]	G	T	9.679e^-5	0.642	INTRON mam	TF binding site mE1_TFBS_HSA
2L	9874001	2L_9874001_SNP [dm3] 2L_9874001_SNP [dm6]	T	A	9.732e^-5	0.642	INTRON nAChRalpha6
3R	24991977	3R_24991977_SNP [dm3] 3R_29166255_SNP [dm6]	C	A	9.734e^-5	0.642	SYNONYMOUS_CODING CG11898	TF binding site mE1_TFBS_chinmo
2L	2264650	2L_2264650_SNP [dm3] 2L_2264650_SNP [dm6]	A	T	9.763e^-5	0.642	SYNONYMOUS_CODING CG34049 DOWNSTREAM CG4270
2R	16667377	2R_16667377_SNP [dm3] 2R_20779872_SNP [dm6]	A	T	9.795e^-5	0.642	UPSTREAM CG43711 DOWNSTREAM CR44666 INTERGENIC
3L	10866174	3L_10866174_SNP [dm3] 3L_10873074_SNP [dm6]	C	T	9.860e^-5	0.644	SYNONYMOUS_CODING tna	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	678175	3L_678175_SNP [dm3] 3L_678175_SNP [dm6]	C	T	9.899e^-5	0.645	NON_SYNONYMOUS_CODING CG17129
X	3834631	X_3834631_SNP [dm3] X_3940598_SNP [dm6]	T	A	1.003e^-4	0.651	UPSTREAM CG32786 DOWNSTREAM CG2941 INTERGENIC
2R	9926335	2R_9926335_SNP [dm3] 2R_14038830_SNP [dm6]	G	T	1.008e^-4	0.651	NON_SYNONYMOUS_CODING mam	TF binding site mE1_TFBS_chinmo
2L	10892902	2L_10892902_SNP [dm3] 2L_10892902_SNP [dm6]	T	G	1.011e^-4	0.651	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_sens
3L	8012599	3L_8012599_SNP [dm3] 3L_8019499_SNP [dm6]	T	A	1.025e^-4	0.656	INTRON nmo
3L	8012620	3L_8012620_SNP [dm3] 3L_8019520_SNP [dm6]	C	T	1.025e^-4	0.656	INTRON nmo
2R	17089871	2R_17089871_SNP [dm3] 2R_21202366_SNP [dm6]	A	T	1.032e^-4	0.656	UPSTREAM Glycogenin INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	14200352	2L_14200352_SNP [dm3] 2L_14200352_SNP [dm6]	T	C	1.037e^-4	0.656	INTRON Dyrk2
2R	9526877	2R_9526877_SNP [dm3] 2R_13639372_SNP [dm6]	A	C	1.042e^-4	0.656	INTRON fas	TF binding site mE1_TFBS_HSA
2L	8541901	2L_8541901_SNP [dm3] 2L_8541901_SNP [dm6]	A	G	1.043e^-4	0.656	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3R	25478655	3R_25478655_SNP [dm3] 3R_29652933_SNP [dm6]	G	A	1.045e^-4	0.656	INTRON Dop1R2
2L	5506872	2L_5506872_SNP [dm3] 2L_5506872_SNP [dm6]	G	C	1.045e^-4	0.656	INTERGENIC
3R	17160997	3R_17160997_SNP [dm3] 3R_21335275_SNP [dm6]	T	C	1.064e^-4	0.656	INTRON CG16791	TF binding site mE1_TFBS_inv
2R	13526226	2R_13526226_SNP [dm3] 2R_17638721_SNP [dm6]	T	A	1.067e^-4	0.656	INTRON CG10936	TF binding site mE1_TFBS_cad mE1_TFBS_Trl
X	4574151	X_4574151_SNP [dm3] X_4680118_SNP [dm6]	T	C	1.067e^-4	0.656	UTR_3_PRIME Pp2C1 UPSTREAM rap DOWNSTREAM Pp2C1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
X	12792279	X_12792279_SNP [dm3] X_12898246_SNP [dm6]	T	A	1.074e^-4	0.656	SYNONYMOUS_CODING CG32650 UPSTREAM Pde9 DOWNSTREAM CG32649	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7535925	3L_7535925_SNP [dm3] 3L_7542825_SNP [dm6]	G	A	1.075e^-4	0.656	UPSTREAM CG32376 INTERGENIC
2L	10551758	2L_10551758_SNP [dm3] 2L_10551758_SNP [dm6]	C	T	1.076e^-4	0.656	INTRON Trim9	TF binding site mE1_TFBS_cad
3L	5869282	3L_5869282_SNP [dm3] 3L_5876182_SNP [dm6]	A	C	1.083e^-4	0.656	DOWNSTREAM CG18586 INTERGENIC
3L	10543884	3L_10543884_SNP [dm3] 3L_10550784_SNP [dm6]	A	G	1.086e^-4	0.656	INTRON A2bp1
3L	3827209	3L_3827209_SNP [dm3] 3L_3827209_SNP [dm6]	T	G	1.088e^-4	0.656	INTRON enc & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	8541960	2L_8541960_DEL [dm3] 2L_8541960_DEL [dm6]	TATAGCT	T	1.088e^-4	0.656	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
2R	7004543	2R_7004543_SNP [dm3] 2R_11117038_SNP [dm6]	A	G	1.091e^-4	0.656	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	7031222	2R_7031222_SNP [dm3] 2R_11143717_SNP [dm6]	T	G	1.096e^-4	0.656	UPSTREAM CG13229 INTRON CG13229
2R	16440301	2R_16440301_SNP [dm3] 2R_20552796_SNP [dm6]	C	T	1.109e^-4	0.656	UPSTREAM CG13430 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA
3R	16003523	3R_16003523_INS [dm3] 3R_20177801_INS [dm6]	T	TTTATAAACTGTATAAACTG...	1.120e^-4	0.656	INTERGENIC
2L	5134713	2L_5134713_SNP [dm3] 2L_5134713_SNP [dm6]	C	T	1.121e^-4	0.656	SYNONYMOUS_CODING Msp300 INTRON Msp300
2L	7417195	2L_7417195_SNP [dm3] 2L_7417195_SNP [dm6]	T	A	1.134e^-4	0.656	INTRON chm	TF binding site BDTNP1_TFBS_dl
3L	15541733	3L_15541733_SNP [dm3] 3L_15548633_SNP [dm6]	T	A	1.135e^-4	0.656	INTRON CrebA	TF binding site BDTNP1_TFBS_hb
2R	9450588	2R_9450588_SNP [dm3] 2R_13563083_SNP [dm6]	G	A	1.147e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
2R	19690553	2R_19690553_SNP [dm3] 2R_23803030_SNP [dm6]	G	A	1.147e^-4	0.656	UTR_3_PRIME CG30177
2L	15096093	2L_15096093_SNP [dm3] 2L_15096093_SNP [dm6]	C	T	1.154e^-4	0.656	UTR_3_PRIME CG15270
2L	5380585	2L_5380585_SNP [dm3] 2L_5380585_SNP [dm6]	C	T	1.163e^-4	0.656	EXON CR42850	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	8974373	3L_8974373_SNP [dm3] 3L_8981273_SNP [dm6]	T	C	1.163e^-4	0.656	UPSTREAM CG13314 DOWNSTREAM Galk INTERGENIC
3R	23774307	3R_23774307_SNP [dm3] 3R_27948585_SNP [dm6]	T	C	1.173e^-4	0.656	UPSTREAM Gp93 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2L	16108397	2L_16108397_SNP [dm3] 2L_16108397_SNP [dm6]	T	C	1.173e^-4	0.656	INTERGENIC
3L	9239964	3L_9239964_SNP [dm3] 3L_9246864_SNP [dm6]	C	T	1.174e^-4	0.656	INTERGENIC
2R	15702247	2R_15702247_SNP [dm3] 2R_19814742_SNP [dm6]	G	A	1.177e^-4	0.656	UPSTREAM Obp56h INTERGENIC	regulatory region REDfly_CRMs
3R	26359139	3R_26359139_SNP [dm3] 3R_30533417_SNP [dm6]	A	C	1.179e^-4	0.656	SYNONYMOUS_CODING tmod
X	2436828	X_2436828_SNP [dm3] X_2542795_SNP [dm6]	G	A	1.182e^-4	0.656	INTRON trol	TF binding site BDTNP1_TFBS_twi
3L	7693353	3L_7693353_SNP [dm3] 3L_7700253_SNP [dm6]	T	C	1.185e^-4	0.656	NON_SYNONYMOUS_CODING Ank2 INTRON CG32373
3L	7535165	3L_7535165_SNP [dm3] 3L_7542065_SNP [dm6]	A	T	1.189e^-4	0.656	SYNONYMOUS_CODING CG32376 UPSTREAM CG32374	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	16337307	X_16337307_SNP [dm3] X_16443274_SNP [dm6]	G	T	1.189e^-4	0.656	INTRON rngo
2R	19657807	2R_19657807_SNP [dm3] 2R_23770284_SNP [dm6]	G	A	1.194e^-4	0.656	INTRON CG9850	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	7121702	2R_7121702_SNP [dm3] 2R_11234197_SNP [dm6]	G	A	1.202e^-4	0.656	SYNONYMOUS_CODING CG13228 UPSTREAM CG13218
3L	1734757	3L_1734757_SNP [dm3] 3L_1734757_SNP [dm6]	C	T	1.211e^-4	0.656	SYNONYMOUS_CODING Oseg4	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	17161647	2L_17161647_SNP [dm3] 2L_17161647_SNP [dm6]	C	T	1.213e^-4	0.656	INTRON beat-IIIa & 1 other
3L	2697214	3L_2697214_SNP [dm3] 3L_2697214_SNP [dm6]	A	G	1.219e^-4	0.656	INTRON Fife
X	16297099	X_16297099_SNP [dm3] X_16403066_SNP [dm6]	G	A	1.229e^-4	0.656	INTRON CG9981	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	7444982	X_7444982_DEL [dm3] X_7550949_DEL [dm6]	AA	A	1.230e^-4	0.656	INTERGENIC
3R	14015256	3R_14015256_SNP [dm3] 3R_18189534_SNP [dm6]	T	C	1.230e^-4	0.656	SYNONYMOUS_CODING MED17 UPSTREAM CG12321	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	13516317	2R_13516317_SNP [dm3] 2R_17628812_SNP [dm6]	A	C	1.241e^-4	0.656	INTRON CG10936 & 1 other
3L	7300051	3L_7300051_SNP [dm3] 3L_7306951_SNP [dm6]	T	G	1.243e^-4	0.656	INTRON unc-13-4A
3L	4669263	3L_4669263_SNP [dm3] 3L_4669263_SNP [dm6]	C	A	1.247e^-4	0.656	INTRON axo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9398769	2L_9398769_SNP [dm3] 2L_9398769_SNP [dm6]	G	A	1.255e^-4	0.656	UPSTREAM CG4438 INTRON Shawl
3L	13918921	3L_13918921_SNP [dm3] 3L_13925821_SNP [dm6]	G	T	1.255e^-4	0.656	UPSTREAM Rgl DOWNSTREAM CG8833 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	2835447	2L_2835447_SNP [dm3] 2L_2835447_SNP [dm6]	C	T	1.255e^-4	0.656	SYNONYMOUS_CODING CG3119 DOWNSTREAM CG3119
2R	17802824	2R_17802824_SNP [dm3] 2R_21915319_SNP [dm6]	G	T	1.256e^-4	0.656	INTRON Fili
2R	19034866	2R_19034866_SNP [dm3] 2R_23147343_SNP [dm6]	G	A	1.259e^-4	0.656	INTERGENIC
3L	8018297	3L_8018297_SNP [dm3] 3L_8025197_SNP [dm6]	T	G	1.259e^-4	0.656	INTRON nmo
X	9226084	X_9226084_SNP [dm3] X_9332051_SNP [dm6]	A	G	1.259e^-4	0.656	INTRON CG34449
2R	7016084	2R_7016084_SNP [dm3] 2R_11128579_SNP [dm6]	G	A	1.260e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	3822079	3L_3822079_SNP [dm3] 3L_3822079_SNP [dm6]	A	C	1.263e^-4	0.656	INTRON enc
2R	19598997	2R_19598997_SNP [dm3] 2R_23711474_SNP [dm6]	C	T	1.263e^-4	0.656	INTERGENIC
X	16531656	X_16531656_SNP [dm3] X_16637623_SNP [dm6]	G	A	1.263e^-4	0.656	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3R	21178074	3R_21178074_SNP [dm3] 3R_25352352_SNP [dm6]	G	T	1.264e^-4	0.656	DOWNSTREAM Fur1 INTRON Fur1
3R	11436373	3R_11436373_SNP [dm3] 3R_15610651_SNP [dm6]	G	C	1.271e^-4	0.656	INTERGENIC
3L	16421446	3L_16421446_SNP [dm3] 3L_16428346_SNP [dm6]	G	A	1.273e^-4	0.656	INTRON CG33158 & 1 other
2R	10746093	2R_10746093_SNP [dm3] 2R_14858588_SNP [dm6]	C	T	1.274e^-4	0.656	SYNONYMOUS_CODING CG33506 DOWNSTREAM U3-55K	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	12199706	2L_12199706_SNP [dm3] 2L_12199706_SNP [dm6]	T	C	1.289e^-4	0.656	INTRON aret
2R	7006508	2R_7006508_SNP [dm3] 2R_11119003_SNP [dm6]	A	T	1.291e^-4	0.656	UTR_3_PRIME Cyp12d1-p DOWNSTREAM Cyp12d1-p
3L	14075463	3L_14075463_SNP [dm3] 3L_14082363_SNP [dm6]	C	T	1.291e^-4	0.656	SYNONYMOUS_CODING btl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	16667914	2R_16667914_SNP [dm3] 2R_20780409_SNP [dm6]	G	A	1.298e^-4	0.656	UPSTREAM CG43711 EXON CR44666	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	4565339	X_4565339_SNP [dm3] X_4671306_SNP [dm6]	G	A	1.298e^-4	0.656	INTRON rap
2R	14752380	2R_14752380_SNP [dm3] 2R_18864875_SNP [dm6]	C	T	1.299e^-4	0.656	UTR_3_PRIME CG43071 UPSTREAM Dpt DOWNSTREAM CG43070
2L	16107545	2L_16107545_SNP [dm3] 2L_16107545_SNP [dm6]	G	A	1.300e^-4	0.656	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	15567897	2R_15567897_DEL [dm3] 2R_19680392_DEL [dm6]	CC	C	1.301e^-4	0.656	DOWNSTREAM CG15127 INTERGENIC
3L	14997603	3L_14997603_SNP [dm3] 3L_15004503_SNP [dm6]	A	T	1.307e^-4	0.656	INTRON Reck
3L	10565976	3L_10565976_DEL [dm3] 3L_10572876_DEL [dm6]	TT	T	1.315e^-4	0.656	INTRON A2bp1
X	7445618	X_7445618_SNP [dm3] X_7551585_SNP [dm6]	T	G	1.324e^-4	0.656	INTERGENIC
2R	16868727	2R_16868727_SNP [dm3] 2R_20981222_SNP [dm6]	T	C	1.327e^-4	0.656	INTRON CG9313	TF binding site mE1_TFBS_cad
X	13844908	X_13844908_SNP [dm3] X_13950875_SNP [dm6]	C	A	1.329e^-4	0.656	INTRON mamo
3R	14922846	3R_14922846_SNP [dm3] 3R_19097124_SNP [dm6]	T	C	1.336e^-4	0.656	UTR_5_PRIME CG6040 DOWNSTREAM ATPsyn-d	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	14774736	3L_14774736_SNP [dm3] 3L_14781636_SNP [dm6]	G	T	1.337e^-4	0.656	INTRON bmm	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	2694774	3L_2694774_SNP [dm3] 3L_2694774_SNP [dm6]	T	G	1.338e^-4	0.656	INTRON Fife
2R	17087208	2R_17087208_SNP [dm3] 2R_21199703_SNP [dm6]	C	G	1.341e^-4	0.656	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
2R	10821583	2R_10821583_INS [dm3] 2R_14934078_INS [dm6]	G	GAG	1.348e^-4	0.656	UPSTREAM CG10253 DOWNSTREAM CG12853 INTRON CG10253	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	7120889	2R_7120889_SNP [dm3] 2R_11233384_SNP [dm6]	C	A	1.351e^-4	0.656	SYNONYMOUS_CODING CG13218 UPSTREAM metro & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl
3L	3008416	3L_3008416_INS [dm3] 3L_3008416_INS [dm6]	A	ACAA	1.352e^-4	0.656	INTRON FMRFaR
2L	12137435	2L_12137435_SNP [dm3] 2L_12137435_SNP [dm6]	G	C	1.354e^-4	0.656	UPSTREAM Gr33a INTERGENIC
3L	14054672	3L_14054672_DEL [dm3] 3L_14061572_DEL [dm6]	TT	T	1.356e^-4	0.656	INTRON CG32138
3L	2019653	3L_2019653_SNP [dm3] 3L_2019653_SNP [dm6]	A	G	1.364e^-4	0.656	DOWNSTREAM CG42357 INTERGENIC
3L	16357300	3L_16357300_DEL [dm3] 3L_16364200_DEL [dm6]	GGCG	G	1.369e^-4	0.656	UPSTREAM Cpr72Eb DOWNSTREAM Cpr72Ea INTERGENIC
2R	9120685	2R_9120685_SNP [dm3] 2R_13233180_SNP [dm6]	T	C	1.370e^-4	0.656	INTRON CG4670	TF binding site mE1_TFBS_cad
2R	7004148	2R_7004148_SNP [dm3] 2R_11116643_SNP [dm6]	A	T	1.370e^-4	0.656	UPSTREAM luna DOWNSTREAM Cyp12d1-p INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	9873854	2L_9873854_SNP [dm3] 2L_9873854_SNP [dm6]	T	A	1.374e^-4	0.656	INTRON nAChRalpha6
2L	17120853	2L_17120853_SNP [dm3] 2L_17120853_SNP [dm6]	G	A	1.376e^-4	0.656	INTERGENIC
2L	8541869	2L_8541869_DEL [dm3] 2L_8541869_DEL [dm6]	TA	T	1.382e^-4	0.656	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	17087653	2R_17087653_SNP [dm3] 2R_21200148_SNP [dm6]	T	C	1.384e^-4	0.656	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
X	16531665	X_16531665_SNP [dm3] X_16637632_SNP [dm6]	T	C	1.392e^-4	0.656	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3R	14613127	3R_14613127_SNP [dm3] 3R_18787405_SNP [dm6]	C	A	1.393e^-4	0.656	INTRON CG7720
3L	5431393	3L_5431393_SNP [dm3] 3L_5438293_SNP [dm6]	A	T	1.396e^-4	0.656	INTRON CG34391
2L	12339547	2L_12339547_SNP [dm3] 2L_12339547_SNP [dm6]	G	A	1.397e^-4	0.656	DOWNSTREAM CG31862 INTERGENIC
2R	17635661	2R_17635661_SNP [dm3] 2R_21748156_SNP [dm6]	T	C	1.397e^-4	0.656	INTERGENIC
3R	7720570	3R_7720570_SNP [dm3] 3R_11894848_SNP [dm6]	G	C	1.397e^-4	0.656	SYNONYMOUS_CODING Cad87A
3L	5842249	3L_5842249_SNP [dm3] 3L_5849149_SNP [dm6]	C	T	1.398e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
2R	17906670	2R_17906670_SNP [dm3] 2R_22019165_SNP [dm6]	G	A	1.402e^-4	0.656	INTRON CG34370
3L	13012888	3L_13012888_SNP [dm3] 3L_13019788_SNP [dm6]	C	T	1.402e^-4	0.656	UTR_3_PRIME AdenoK UPSTREAM CR45445 DOWNSTREAM AdenoK & 1 other
2R	7016080	2R_7016080_SNP [dm3] 2R_11128575_SNP [dm6]	C	A	1.403e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	10887402	2R_10887402_SNP [dm3] 2R_14999897_SNP [dm6]	A	G	1.407e^-4	0.656	INTERGENIC
2L	9413628	2L_9413628_SNP [dm3] 2L_9413628_SNP [dm6]	A	C	1.414e^-4	0.656	INTRON Shawl
2L	9874025	2L_9874025_SNP [dm3] 2L_9874025_SNP [dm6]	C	A	1.417e^-4	0.656	INTRON nAChRalpha6
3L	3370227	3L_3370227_SNP [dm3] 3L_3370227_SNP [dm6]	G	C	1.421e^-4	0.656	DOWNSTREAM YT521-B & 1 other INTERGENIC
2R	20435900	2R_20435900_SNP [dm3] 2R_24548377_SNP [dm6]	C	G	1.422e^-4	0.656	INTRON CG4622 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	15025087	2R_15025087_SNP [dm3] 2R_19137582_SNP [dm6]	T	C	1.423e^-4	0.656	UPSTREAM CG15118 INTRON CG15111	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3R	19573617	3R_19573617_SNP [dm3] 3R_23747895_SNP [dm6]	T	C	1.423e^-4	0.656	SYNONYMOUS_CODING Hmgcr	TF binding site mE1_TFBS_cad
2L	885738	2L_885738_SNP [dm3] 2L_885738_SNP [dm6]	G	C	1.434e^-4	0.656	UPSTREAM CG15824 INTERGENIC
3L	10588166	3L_10588166_SNP [dm3] 3L_10595066_SNP [dm6]	C	T	1.435e^-4	0.656	INTERGENIC
3R	26974825	3R_26974825_SNP [dm3] 3R_31149103_SNP [dm6]	C	T	1.439e^-4	0.656	INTRON Gycbeta100B
2R	10820885	2R_10820885_DEL [dm3] 2R_14933380_DEL [dm6]	CC	C	1.448e^-4	0.656	UPSTREAM CG12853 & 1 other INTRON CG10253	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	7417156	2L_7417156_SNP [dm3] 2L_7417156_SNP [dm6]	T	A	1.449e^-4	0.656	INTRON chm	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	3008396	3L_3008396_SNP [dm3] 3L_3008396_SNP [dm6]	T	A	1.450e^-4	0.656	INTRON FMRFaR
2R	16666693	2R_16666693_SNP [dm3] 2R_20779188_SNP [dm6]	A	G	1.451e^-4	0.656	SYNONYMOUS_CODING CG43711
3R	24127314	3R_24127314_SNP [dm3] 3R_28301592_SNP [dm6]	C	G	1.453e^-4	0.656	INTERGENIC
2R	1628831	2R_1628831_SNP [dm3] 2R_5741326_SNP [dm6]	A	T	1.454e^-4	0.656	INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
3L	11107233	3L_11107233_SNP [dm3] 3L_11114133_SNP [dm6]	G	A	1.456e^-4	0.656	UPSTREAM Sod DOWNSTREAM fd68A INTERGENIC
3L	884387	3L_884387_SNP [dm3] 3L_884387_SNP [dm6]	C	A	1.458e^-4	0.656	INTRON CG32479
3R	23481848	3R_23481848_INS [dm3] 3R_27656126_INS [dm6]	G	GTTAGATGGGATTATACTAT...	1.460e^-4	0.656	DOWNSTREAM Mlc1 INTRON tau
2R	8503142	2R_8503142_SNP [dm3] 2R_12615637_SNP [dm6]	C	T	1.466e^-4	0.656	UPSTREAM Galphaq INTRON Galphaq & 1 other	TF binding site mE1_TFBS_sens
2R	9182241	2R_9182241_SNP [dm3] 2R_13294736_SNP [dm6]	T	G	1.466e^-4	0.656	INTRON Dh31-R
3L	5843015	3L_5843015_SNP [dm3] 3L_5849915_SNP [dm6]	G	A	1.470e^-4	0.656	INTERGENIC
3R	22650479	3R_22650479_INS [dm3] 3R_26824757_INS [dm6]	A	ACAGACAAA	1.470e^-4	0.656	INTRON Tl
3L	8021038	3L_8021038_SNP [dm3] 3L_8027938_SNP [dm6]	A	G	1.487e^-4	0.656	DOWNSTREAM tRNA:CR32370 INTRON nmo	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	13515879	2R_13515879_SNP [dm3] 2R_17628374_SNP [dm6]	C	A	1.489e^-4	0.656	DOWNSTREAM rhi INTRON CG10936
2L	14000830	2L_14000830_SNP [dm3] 2L_14000830_SNP [dm6]	A	G	1.490e^-4	0.656	INTRON rk
2R	6995229	2R_6995229_SNP [dm3] 2R_11107724_SNP [dm6]	A	T	1.493e^-4	0.656	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	4690860	2L_4690860_SNP [dm3] 2L_4690860_SNP [dm6]	C	T	1.497e^-4	0.656	UPSTREAM CG3251 INTERGENIC
3L	2695194	3L_2695194_SNP [dm3] 3L_2695194_SNP [dm6]	G	T	1.499e^-4	0.656	INTRON Fife
2R	18117876	2R_18117876_SNP [dm3] 2R_22230371_SNP [dm6]	A	C	1.501e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	12722118	3L_12722118_SNP [dm3] 3L_12729018_SNP [dm6]	C	T	1.503e^-4	0.656	INTERGENIC
X	7444979	X_7444979_SNP [dm3] X_7550946_SNP [dm6]	A	T	1.504e^-4	0.656	INTERGENIC
2L	14727767	2L_14727767_SNP [dm3] 2L_14727767_SNP [dm6]	C	T	1.505e^-4	0.656	SYNONYMOUS_CODING CG42685	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	17089888	2R_17089888_SNP [dm3] 2R_21202383_SNP [dm6]	A	T	1.506e^-4	0.656	UPSTREAM Glycogenin INTRON Glycogenin & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	25947565	3R_25947565_SNP [dm3] 3R_30121843_SNP [dm6]	C	T	1.513e^-4	0.656	DOWNSTREAM CG45072 & 1 other INTERGENIC	TF binding site mE1_TFBS_bab1
3R	21030869	3R_21030869_SNP [dm3] 3R_25205147_SNP [dm6]	C	T	1.518e^-4	0.656	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
3R	11479523	3R_11479523_SNP [dm3] 3R_15653801_SNP [dm6]	A	G	1.519e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_eve
3R	26252066	3R_26252066_SNP [dm3] 3R_30426344_SNP [dm6]	C	G	1.520e^-4	0.656	SYNONYMOUS_CODING CG2218	TF binding site BDTNP1_TFBS_ftz BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	11186881	2L_11186881_SNP [dm3] 2L_11186881_SNP [dm6]	G	A	1.529e^-4	0.656	INTRON Ca-beta
2R	7031188	2R_7031188_SNP [dm3] 2R_11143683_SNP [dm6]	A	T	1.542e^-4	0.656	UPSTREAM CG13229 INTRON CG13229
2L	6320646	2L_6320646_SNP [dm3] 2L_6320646_SNP [dm6]	A	C	1.544e^-4	0.656	INTRON Ddr
3R	7710458	3R_7710458_SNP [dm3] 3R_11884736_SNP [dm6]	A	G	1.549e^-4	0.656	SYNONYMOUS_CODING mthl5 INTRON CG31368
2L	4864033	2L_4864033_SNP [dm3] 2L_4864033_SNP [dm6]	A	T	1.560e^-4	0.656	INTRON pog	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	16335042	X_16335042_SNP [dm3] X_16441009_SNP [dm6]	C	T	1.565e^-4	0.656	UPSTREAM rngo INTRON CG9947	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3R	15480720	3R_15480720_SNP [dm3] 3R_19654998_SNP [dm6]	A	T	1.567e^-4	0.656	SYNONYMOUS_CODING CG6184	TF binding site BDTNP1_TFBS_Mad mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	14863186	2L_14863186_SNP [dm3] 2L_14863186_SNP [dm6]	G	A	1.572e^-4	0.656	INTERGENIC
2L	14012224	2L_14012224_DEL [dm3] 2L_14012224_DEL [dm6]	TTGTATGTAT	T	1.575e^-4	0.656	UPSTREAM bgm INTERGENIC	TF binding site mE1_TFBS_inv
3R	5946654	3R_5946654_SNP [dm3] 3R_10120932_SNP [dm6]	G	C	1.587e^-4	0.656	NON_SYNONYMOUS_CODING gammaSnap2 UPSTREAM CG31477 DOWNSTREAM CG3940
2R	10066380	2R_10066380_SNP [dm3] 2R_14178875_SNP [dm6]	A	G	1.594e^-4	0.656	INTRON cg	TF binding site mE1_TFBS_HSA
2L	7417157	2L_7417157_SNP [dm3] 2L_7417157_SNP [dm6]	G	A	1.594e^-4	0.656	INTRON chm	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	13240180	3L_13240180_DEL [dm3] 3L_13247080_DEL [dm6]	CGG	C	1.595e^-4	0.656	UTR_3_PRIME CG32119 INTRON caps
3L	2694703	3L_2694703_SNP [dm3] 3L_2694703_SNP [dm6]	G	C	1.596e^-4	0.656	INTRON Fife
X	663806	X_663806_SNP [dm3] X_769773_SNP [dm6]	T	A	1.597e^-4	0.656	UPSTREAM fz3 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
2L	9076900	2L_9076900_SNP [dm3] 2L_9076900_SNP [dm6]	T	C	1.602e^-4	0.656	UPSTREAM CG12439 INTERGENIC
2L	5380596	2L_5380596_SNP [dm3] 2L_5380596_SNP [dm6]	T	C	1.603e^-4	0.656	EXON CR42850	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	9016690	X_9016690_SNP [dm3] X_9122657_SNP [dm6]	C	T	1.604e^-4	0.656	UTR_3_PRIME fend DOWNSTREAM fend
X	3458602	X_3458602_SNP [dm3] X_3564569_SNP [dm6]	G	A	1.604e^-4	0.656	INTRON CG32791 & 1 other
2L	9873997	2L_9873997_SNP [dm3] 2L_9873997_SNP [dm6]	A	T	1.607e^-4	0.656	INTRON nAChRalpha6
3L	1286960	3L_1286960_SNP [dm3] 3L_1286960_SNP [dm6]	G	A	1.621e^-4	0.656	INTRON CG32333
2L	4276194	2L_4276194_DEL [dm3] 2L_4276194_DEL [dm6]	TTGGAGCTGCCAATTGTCAT...	T	1.621e^-4	0.656	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12137784	2L_12137784_INS [dm3] 2L_12137784_INS [dm6]	T	TT	1.621e^-4	0.656	UPSTREAM Gr33a INTERGENIC
2L	6760745	2L_6760745_SNP [dm3] 2L_6760745_SNP [dm6]	G	A	1.629e^-4	0.656	INTRON CG11321	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3786738	3L_3786738_SNP [dm3] 3L_3786738_SNP [dm6]	A	T	1.640e^-4	0.656	INTRON CG32264	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
3L	14493704	3L_14493704_SNP [dm3] 3L_14500604_SNP [dm6]	C	A	1.640e^-4	0.656	INTRON bbg
X	16633276	X_16633276_DEL [dm3] X_16739243_DEL [dm6]	AAA	A	1.641e^-4	0.656	DOWNSTREAM TwdlZ INTRON CG9634
2R	6995302	2R_6995302_SNP [dm3] 2R_11107797_SNP [dm6]	T	A	1.641e^-4	0.656	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	9387240	2L_9387240_SNP [dm3] 2L_9387240_SNP [dm6]	C	T	1.644e^-4	0.656	UPSTREAM Aldh INTRON Shawl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	9262783	3R_9262783_SNP [dm3] 3R_13437061_SNP [dm6]	A	T	1.655e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	14912879	3R_14912879_SNP [dm3] 3R_19087157_SNP [dm6]	C	T	1.662e^-4	0.656	INTRON cdi	TF binding site mE1_TFBS_chinmo
3L	2693446	3L_2693446_SNP [dm3] 3L_2693446_SNP [dm6]	G	T	1.662e^-4	0.656	INTRON Fife
2L	16108411	2L_16108411_SNP [dm3] 2L_16108411_SNP [dm6]	G	A	1.667e^-4	0.656	INTERGENIC
2R	10520804	2R_10520804_SNP [dm3] 2R_14633299_SNP [dm6]	C	G	1.668e^-4	0.656	INTERGENIC
3R	21027496	3R_21027496_SNP [dm3] 3R_25201774_SNP [dm6]	T	G	1.668e^-4	0.656	INTRON CG13654 & 1 other
X	2061768	X_2061768_SNP [dm3] X_2167735_SNP [dm6]	G	A	1.671e^-4	0.656	INTRON CG3630
2R	15025009	2R_15025009_SNP [dm3] 2R_19137504_SNP [dm6]	T	A	1.679e^-4	0.656	UTR_5_PRIME CG15111 UPSTREAM CG15118	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3L	22691914	3L_22691914_SNP [dm3] 3L_22698814_SNP [dm6]	G	T	1.680e^-4	0.656	UPSTREAM CG45116 DOWNSTREAM CG32453 INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	5751258	3L_5751258_SNP [dm3] 3L_5758158_SNP [dm6]	T	G	1.683e^-4	0.656	INTRON Ubp64E	TF binding site mE1_TFBS_cad
3L	13240488	3L_13240488_SNP [dm3] 3L_13247388_SNP [dm6]	C	T	1.686e^-4	0.656	SYNONYMOUS_CODING CG32119 INTRON caps	TF binding site mE1_TFBS_HSA
X	5359507	X_5359507_DEL [dm3] X_5465474_DEL [dm6]	CGAGTCTCGGAGTCC...	C	1.689e^-4	0.656	INTRON SPR
2R	8842957	2R_8842957_SNP [dm3] 2R_12955452_SNP [dm6]	A	G	1.693e^-4	0.656	UTR_3_PRIME CG13321 DOWNSTREAM CG13321	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	1088686	2L_1088686_SNP [dm3] 2L_1088686_SNP [dm6]	A	T	1.693e^-4	0.656	INTRON CG4629
2R	15117151	2R_15117151_DEL [dm3] 2R_19229646_DEL [dm6]	TTA	T	1.695e^-4	0.656	UTR_5_PRIME cora	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	6133832	2L_6133832_SNP [dm3] 2L_6133832_SNP [dm6]	C	T	1.696e^-4	0.656	UPSTREAM CR45719 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi
3R	27153377	3R_27153377_SNP [dm3] 3R_31327655_SNP [dm6]	C	G	1.704e^-4	0.656	INTRON CG34347	TF binding site mE1_TFBS_cad
X	7865936	X_7865936_DEL [dm3] X_7971903_DEL [dm6]	GG	G	1.710e^-4	0.656	INTRON sn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	8541867	2L_8541867_SNP [dm3] 2L_8541867_SNP [dm6]	T	A	1.721e^-4	0.656	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	6994479	2R_6994479_SNP [dm3] 2R_11106974_SNP [dm6]	T	C	1.721e^-4	0.656	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2R	6372638	2R_6372638_SNP [dm3] 2R_10485133_SNP [dm6]	T	G	1.723e^-4	0.656	UTR_5_PRIME pre-lola-G INTRON lola & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3L	8031406	3L_8031406_SNP [dm3] 3L_8038306_SNP [dm6]	T	A	1.727e^-4	0.656	INTRON nmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2L	9804502	2L_9804502_INS [dm3] 2L_9804502_INS [dm6]	T	TTAGCT	1.728e^-4	0.656	INTRON nAChRalpha6
2L	8541868	2L_8541868_SNP [dm3] 2L_8541868_SNP [dm6]	T	G	1.734e^-4	0.656	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	26089584	3R_26089584_MNP [dm3] 3R_30263862_MNP [dm6]	ATA	TAT	1.740e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	870962	3L_870962_SNP [dm3] 3L_870962_SNP [dm6]	C	T	1.742e^-4	0.656	UTR_3_PRIME CG12502 UPSTREAM CG32479 DOWNSTREAM CG12502	TF binding site BDTNP1_TFBS_dl
3R	23774336	3R_23774336_SNP [dm3] 3R_27948614_SNP [dm6]	G	A	1.742e^-4	0.656	UPSTREAM Gp93 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
2R	9182337	2R_9182337_SNP [dm3] 2R_13294832_SNP [dm6]	A	G	1.749e^-4	0.656	INTRON Dh31-R
2R	13516104	2R_13516104_SNP [dm3] 2R_17628599_SNP [dm6]	T	C	1.758e^-4	0.656	UTR_3_PRIME rhi INTRON CG10936
X	20157240	X_20157240_SNP [dm3] X_20286213_SNP [dm6]	A	G	1.763e^-4	0.656	INTERGENIC
2L	9873875	2L_9873875_SNP [dm3] 2L_9873875_SNP [dm6]	C	A	1.768e^-4	0.656	INTRON nAChRalpha6
2L	14223536	2L_14223536_SNP [dm3] 2L_14223536_SNP [dm6]	G	T	1.773e^-4	0.656	INTRON Dyrk2
3L	10812816	3L_10812816_SNP [dm3] 3L_10819716_SNP [dm6]	T	C	1.774e^-4	0.656	INTERGENIC
3L	12085742	3L_12085742_SNP [dm3] 3L_12092642_SNP [dm6]	T	G	1.774e^-4	0.656	INTERGENIC
2R	6659281	2R_6659281_SNP [dm3] 2R_10771776_SNP [dm6]	A	G	1.778e^-4	0.656	INTRON CG33144	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	10912753	3L_10912753_SNP [dm3] 3L_10919653_SNP [dm6]	A	C	1.785e^-4	0.656	INTERGENIC
2L	4595970	2L_4595970_SNP [dm3] 2L_4595970_SNP [dm6]	G	A	1.794e^-4	0.656	UPSTREAM dp INTRON dp	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	6133846	2L_6133846_SNP [dm3] 2L_6133846_SNP [dm6]	T	C	1.796e^-4	0.656	UPSTREAM CR45719 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi
3L	438715	3L_438715_SNP [dm3] 3L_438715_SNP [dm6]	G	A	1.798e^-4	0.656	UPSTREAM klar INTRON klar
3L	2840033	3L_2840033_SNP [dm3] 3L_2840033_SNP [dm6]	G	T	1.800e^-4	0.656	INTRON CG43444
2R	14526950	2R_14526950_INS [dm3] 2R_18639445_INS [dm6]	A	ATAG	1.802e^-4	0.656	UPSTREAM tRNA:CR30227 & 2 others DOWNSTREAM tRNA:G3:55E INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6760750	2L_6760750_SNP [dm3] 2L_6760750_SNP [dm6]	T	G	1.802e^-4	0.656	INTRON CG11321	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6760751	2L_6760751_SNP [dm3] 2L_6760751_SNP [dm6]	T	A	1.802e^-4	0.656	INTRON CG11321	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6760755	2L_6760755_SNP [dm3] 2L_6760755_SNP [dm6]	T	A	1.802e^-4	0.656	INTRON CG11321	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	28163	2R_28163_SNP [dm3] 2R_4140658_SNP [dm6]	A	G	1.804e^-4	0.656	INTERGENIC
3L	5403974	3L_5403974_SNP [dm3] 3L_5410874_SNP [dm6]	A	G	1.804e^-4	0.656	INTERGENIC
2R	13526456	2R_13526456_SNP [dm3] 2R_17638951_SNP [dm6]	A	T	1.806e^-4	0.656	INTRON CG10936	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	12339502	2L_12339502_SNP [dm3] 2L_12339502_SNP [dm6]	T	C	1.808e^-4	0.656	DOWNSTREAM CG31862 INTERGENIC
2L	2717136	2L_2717136_SNP [dm3] 2L_2717136_SNP [dm6]	A	T	1.812e^-4	0.656	INTRON CG31690
3L	10848648	3L_10848648_SNP [dm3] 3L_10855548_SNP [dm6]	T	G	1.813e^-4	0.656	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	25947564	3R_25947564_SNP [dm3] 3R_30121842_SNP [dm6]	G	A	1.819e^-4	0.656	DOWNSTREAM CG45072 & 1 other INTERGENIC	TF binding site mE1_TFBS_bab1
3L	12533103	3L_12533103_SNP [dm3] 3L_12540003_SNP [dm6]	G	A	1.820e^-4	0.656	SYNONYMOUS_CODING sowah INTRON sowah	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	6254419	3R_6254419_SNP [dm3] 3R_10428697_SNP [dm6]	C	T	1.820e^-4	0.656	INTERGENIC
X	19357703	X_19357703_SNP [dm3] X_19463670_SNP [dm6]	A	T	1.821e^-4	0.656	INTRON kek5
2L	9624403	2L_9624403_SNP [dm3] 2L_9624403_SNP [dm6]	G	A	1.823e^-4	0.656	DOWNSTREAM CG31882 INTERGENIC
X	8180600	X_8180600_SNP [dm3] X_8286567_SNP [dm6]	C	G	1.824e^-4	0.656	INTRON nAChRalpha3
3L	12760999	3L_12760999_SNP [dm3] 3L_12767899_SNP [dm6]	A	C	1.825e^-4	0.656	SYNONYMOUS_CODING CG32113 DOWNSTREAM Hip1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	1932969	2L_1932969_SNP [dm3] 2L_1932969_SNP [dm6]	A	T	1.829e^-4	0.656	INTRON CG7337
2L	6760741	2L_6760741_SNP [dm3] 2L_6760741_SNP [dm6]	A	C	1.833e^-4	0.656	INTRON CG11321	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	11710697	2L_11710697_SNP [dm3] 2L_11710697_SNP [dm6]	C	G	1.834e^-4	0.656	INTERGENIC
2L	9804119	2L_9804119_SNP [dm3] 2L_9804119_SNP [dm6]	T	C	1.836e^-4	0.656	INTRON nAChRalpha6
3L	8031403	3L_8031403_SNP [dm3] 3L_8038303_SNP [dm6]	A	C	1.837e^-4	0.656	INTRON nmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
X	10429383	X_10429383_SNP [dm3] X_10535350_SNP [dm6]	G	A	1.840e^-4	0.656	INTRON spri
2L	12137625	2L_12137625_SNP [dm3] 2L_12137625_SNP [dm6]	C	T	1.844e^-4	0.656	UPSTREAM Gr33a INTERGENIC
2R	16442211	2R_16442211_SNP [dm3] 2R_20554706_SNP [dm6]	G	A	1.851e^-4	0.657	INTERGENIC
3L	8020898	3L_8020898_SNP [dm3] 3L_8027798_SNP [dm6]	A	G	1.864e^-4	0.657	DOWNSTREAM tRNA:CR32370 INTRON nmo	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	14759189	X_14759189_SNP [dm3] X_14865156_SNP [dm6]	A	G	1.864e^-4	0.657	SYNONYMOUS_CODING CG9518 INTRON Flo2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	7059195	2L_7059195_SNP [dm3] 2L_7059195_SNP [dm6]	G	C	1.867e^-4	0.657	NON_SYNONYMOUS_CODING Mnn1 DOWNSTREAM CG31907	TF binding site mE1_TFBS_cad
3L	4570642	3L_4570642_SNP [dm3] 3L_4570642_SNP [dm6]	A	G	1.867e^-4	0.657	INTRON CG42540
2R	14752385	2R_14752385_DEL [dm3] 2R_18864880_DEL [dm6]	ATGTATATG	A	1.869e^-4	0.657	UTR_3_PRIME CG43071 UPSTREAM Dpt DOWNSTREAM CG43070
2R	10745512	2R_10745512_SNP [dm3] 2R_14858007_SNP [dm6]	T	C	1.870e^-4	0.657	SYNONYMOUS_CODING CG33506 DOWNSTREAM HPS1 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	4831376	2L_4831376_SNP [dm3] 2L_4831376_SNP [dm6]	C	G	1.874e^-4	0.657	UPSTREAM CG2976 INTRON Ir25a	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	21027486	3R_21027486_SNP [dm3] 3R_25201764_SNP [dm6]	C	T	1.884e^-4	0.658	INTRON CG13654 & 1 other
2R	17098468	2R_17098468_SNP [dm3] 2R_21210963_SNP [dm6]	T	C	1.891e^-4	0.658	UTR_5_PRIME CG44245 DOWNSTREAM Glycogenin INTRON CG44245
3L	5403979	3L_5403979_SNP [dm3] 3L_5410879_SNP [dm6]	A	C	1.891e^-4	0.658	INTERGENIC
3L	5860181	3L_5860181_SNP [dm3] 3L_5867081_SNP [dm6]	C	A	1.894e^-4	0.658	INTERGENIC
2L	6760860	2L_6760860_SNP [dm3] 2L_6760860_SNP [dm6]	C	T	1.896e^-4	0.658	SYNONYMOUS_CODING CG11321	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26089610	3R_26089610_SNP [dm3] 3R_30263888_SNP [dm6]	A	T	1.897e^-4	0.658	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	22286852	3R_22286852_SNP [dm3] 3R_26461130_SNP [dm6]	T	C	1.908e^-4	0.659	UPSTREAM CG5455 DOWNSTREAM CG14238 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	9614531	2L_9614531_SNP [dm3] 2L_9614531_SNP [dm6]	C	T	1.910e^-4	0.659	INTRON Trx-2	TF binding site BDTNP1_TFBS_dl
2R	16667922	2R_16667922_SNP [dm3] 2R_20780417_SNP [dm6]	C	T	1.911e^-4	0.659	UPSTREAM CG43711 EXON CR44666	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	10177537	3L_10177537_SNP [dm3] 3L_10184437_SNP [dm6]	C	T	1.931e^-4	0.662	INTRON dpr10
2R	14996567	2R_14996567_SNP [dm3] 2R_19109062_SNP [dm6]	T	C	1.932e^-4	0.662	SYNONYMOUS_CODING 5-HT1A
2L	11435288	2L_11435288_SNP [dm3] 2L_11435288_SNP [dm6]	A	G	1.936e^-4	0.662	UTR_3_PRIME salm
2L	6065490	2L_6065490_SNP [dm3] 2L_6065490_SNP [dm6]	G	C	1.946e^-4	0.662	SYNONYMOUS_CODING Fbw5 UPSTREAM CG9147	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	16991764	2R_16991764_SNP [dm3] 2R_21104259_SNP [dm6]	T	C	1.946e^-4	0.662	INTRON ktub
3R	5713427	3R_5713427_SNP [dm3] 3R_9887705_SNP [dm6]	T	C	1.947e^-4	0.662	INTRON Glut4EF	TF binding site mE1_TFBS_sens
3L	2694132	3L_2694132_SNP [dm3] 3L_2694132_SNP [dm6]	T	C	1.953e^-4	0.662	INTRON Fife
2L	9618352	2L_9618352_SNP [dm3] 2L_9618352_SNP [dm6]	C	T	1.957e^-4	0.662	INTRON GlcAT-S
3L	18442974	3L_18442974_SNP [dm3] 3L_18449874_SNP [dm6]	A	C	1.962e^-4	0.662	INTERGENIC
3L	5695965	3L_5695965_SNP [dm3] 3L_5702865_SNP [dm6]	A	G	1.963e^-4	0.662	INTRON sif
2L	2264175	2L_2264175_SNP [dm3] 2L_2264175_SNP [dm6]	A	G	1.968e^-4	0.662	SYNONYMOUS_CODING CG4270 DOWNSTREAM CG34049 & 1 other
2L	9386819	2L_9386819_SNP [dm3] 2L_9386819_SNP [dm6]	G	A	1.971e^-4	0.662	UPSTREAM Aldh INTRON Shawl
2R	16990887	2R_16990887_SNP [dm3] 2R_21103382_SNP [dm6]	T	C	1.975e^-4	0.662	INTRON ktub	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2R	15683216	2R_15683216_SNP [dm3] 2R_19795711_SNP [dm6]	A	G	1.976e^-4	0.662	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
X	11912492	X_11912492_INS [dm3] X_12018459_INS [dm6]	T	TT	1.987e^-4	0.662	UPSTREAM CG15735 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Stat92E mE1_TFBS_Ubx
2L	15392617	2L_15392617_SNP [dm3] 2L_15392617_SNP [dm6]	T	C	1.993e^-4	0.662	INTERGENIC
3L	8031360	3L_8031360_SNP [dm3] 3L_8038260_SNP [dm6]	A	G	2.001e^-4	0.662	INTRON nmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2R	14752401	2R_14752401_SNP [dm3] 2R_18864896_SNP [dm6]	T	G	2.003e^-4	0.662	UTR_3_PRIME CG43071 UPSTREAM Dpt DOWNSTREAM CG43070
X	4565321	X_4565321_SNP [dm3] X_4671288_SNP [dm6]	G	C	2.003e^-4	0.662	INTRON rap
2R	7015054	2R_7015054_SNP [dm3] 2R_11127549_SNP [dm6]	T	A	2.008e^-4	0.662	INTERGENIC
2L	8541956	2L_8541956_SNP [dm3] 2L_8541956_SNP [dm6]	A	G	2.012e^-4	0.662	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
2R	10887549	2R_10887549_SNP [dm3] 2R_15000044_SNP [dm6]	A	T	2.013e^-4	0.662	INTERGENIC
X	18047960	X_18047960_SNP [dm3] X_18153927_SNP [dm6]	C	T	2.014e^-4	0.662	INTERGENIC
3L	6824083	3L_6824083_SNP [dm3] 3L_6830983_SNP [dm6]	G	T	2.018e^-4	0.662	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3R	16516534	3R_16516534_SNP [dm3] 3R_20690812_SNP [dm6]	G	A	2.019e^-4	0.662	SYNONYMOUS_CODING Oamb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	9873873	2L_9873873_SNP [dm3] 2L_9873873_SNP [dm6]	G	A	2.019e^-4	0.662	INTRON nAChRalpha6
3L	474031	3L_474031_SNP [dm3] 3L_474031_SNP [dm6]	T	C	2.022e^-4	0.662	INTRON klar
2R	2388821	2R_2388821_INS [dm3] 2R_6501316_INS [dm6]	A	AAT	2.025e^-4	0.662	UPSTREAM jing INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	7535714	3L_7535714_SNP [dm3] 3L_7542614_SNP [dm6]	C	T	2.029e^-4	0.662	UPSTREAM CG32376 INTERGENIC	TF binding site mE1_TFBS_HSA
3R	11473198	3R_11473198_SNP [dm3] 3R_15647476_SNP [dm6]	G	A	2.031e^-4	0.662	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	22906111	3L_22906111_SNP [dm3] 3L_22913011_SNP [dm6]	C	A	2.036e^-4	0.662	INTRON CG12768	TF binding site mE1_TFBS_cad
2L	15042018	2L_15042018_SNP [dm3] 2L_15042018_SNP [dm6]	T	G	2.041e^-4	0.662	INTRON Su_H_	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	4631968	3R_4631968_SNP [dm3] 3R_8806246_SNP [dm6]	T	C	2.044e^-4	0.662	UPSTREAM hng2 & 1 other DOWNSTREAM Tcp-1eta INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	16632887	X_16632887_SNP [dm3] X_16738854_SNP [dm6]	A	G	2.046e^-4	0.662	UTR_3_PRIME TwdlZ INTRON CG9634
3L	1283295	3L_1283295_SNP [dm3] 3L_1283295_SNP [dm6]	G	A	2.047e^-4	0.662	INTRON CG32333
3L	4924476	3L_4924476_SNP [dm3] 3L_4924476_SNP [dm6]	C	T	2.049e^-4	0.662	INTERGENIC
2L	10516548	2L_10516548_SNP [dm3] 2L_10516548_SNP [dm6]	T	C	2.054e^-4	0.663	SYNONYMOUS_CODING Fatp UTR_3_PRIME CG45083 UPSTREAM Lrr47	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2R	892935	2R_892935_SNP [dm3] 2R_5005430_SNP [dm6]	C	T	2.060e^-4	0.664	INTRON Ir41a	transposable element FlyBase
2L	6348849	2L_6348849_SNP [dm3] 2L_6348849_SNP [dm6]	C	T	2.067e^-4	0.664	UPSTREAM CG9497 DOWNSTREAM CG9498 INTERGENIC
2R	7000259	2R_7000259_SNP [dm3] 2R_11112754_SNP [dm6]	C	T	2.069e^-4	0.664	INTRON luna
3L	1670311	3L_1670311_SNP [dm3] 3L_1670311_SNP [dm6]	C	T	2.076e^-4	0.665	UPSTREAM RabX5 DOWNSTREAM CG13930 INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	9517725	2L_9517725_SNP [dm3] 2L_9517725_SNP [dm6]	C	T	2.089e^-4	0.665	SYNONYMOUS_CODING CG33298
3L	8031291	3L_8031291_SNP [dm3] 3L_8038191_SNP [dm6]	C	A	2.103e^-4	0.665	INTRON nmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
3R	22940646	3R_22940646_SNP [dm3] 3R_27114924_SNP [dm6]	T	G	2.107e^-4	0.665	UTR_3_PRIME CG5815 DOWNSTREAM CG6066
3L	11201860	3L_11201860_SNP [dm3] 3L_11208760_SNP [dm6]	G	A	2.110e^-4	0.665	SYNONYMOUS_CODING Ube3a	TF binding site mE1_TFBS_cad
3L	8019955	3L_8019955_SNP [dm3] 3L_8026855_SNP [dm6]	G	A	2.113e^-4	0.665	INTRON nmo
3R	26089593	3R_26089593_SNP [dm3] 3R_30263871_SNP [dm6]	A	T	2.115e^-4	0.665	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	11898847	3L_11898847_SNP [dm3] 3L_11905747_SNP [dm6]	G	A	2.118e^-4	0.665	INTRON CG44837
3L	12722235	3L_12722235_SNP [dm3] 3L_12729135_SNP [dm6]	A	C	2.127e^-4	0.665	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	7709496	3R_7709496_SNP [dm3] 3R_11883774_SNP [dm6]	G	A	2.138e^-4	0.665	NON_SYNONYMOUS_CODING CG31368 DOWNSTREAM mthl5	TF binding site mE1_TFBS_sens
2L	8531292	2L_8531292_SNP [dm3] 2L_8531292_SNP [dm6]	C	T	2.139e^-4	0.665	INTRON CG17834
3R	24756627	3R_24756627_SNP [dm3] 3R_28930905_SNP [dm6]	A	T	2.139e^-4	0.665	INTRON CG14521
2R	18117881	2R_18117881_MNP [dm3] 2R_22230376_MNP [dm6]	AGG	CAC	2.150e^-4	0.665	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	9471178	2R_9471178_SNP [dm3] 2R_13583673_SNP [dm6]	G	C	2.154e^-4	0.665	INTRON CG6191 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Dll
2L	3232931	2L_3232931_SNP [dm3] 2L_3232931_SNP [dm6]	G	C	2.163e^-4	0.665	INTERGENIC
3R	24771178	3R_24771178_SNP [dm3] 3R_28945456_SNP [dm6]	G	A	2.165e^-4	0.665	INTRON CG14521
3L	8669513	3L_8669513_INS [dm3] 3L_8676413_INS [dm6]	C	CC	2.172e^-4	0.665	INTRON h	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12463851	2L_12463851_DEL [dm3] 2L_12463851_DEL [dm6]	TATAC	T	2.177e^-4	0.665	INTRON bun
2R	11979945	2R_11979945_SNP [dm3] 2R_16092440_SNP [dm6]	C	T	2.180e^-4	0.665	INTRON Dg
2R	50493	2R_50493_DEL [dm3] 2R_4162988_DEL [dm6]	TT	T	2.184e^-4	0.665	INTERGENIC
2R	6982326	2R_6982326_SNP [dm3] 2R_11094821_SNP [dm6]	A	G	2.184e^-4	0.665	INTRON luna
2R	6999263	2R_6999263_SNP [dm3] 2R_11111758_SNP [dm6]	T	G	2.185e^-4	0.665	INTRON luna	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sbb
2R	16667934	2R_16667934_SNP [dm3] 2R_20780429_SNP [dm6]	A	G	2.189e^-4	0.665	UPSTREAM CG43711 EXON CR44666	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	4687060	3L_4687060_SNP [dm3] 3L_4687060_SNP [dm6]	A	C	2.194e^-4	0.665	UTR_5_PRIME axo DOWNSTREAM CG7514
2L	19084511	2L_19084511_SNP [dm3] 2L_19084511_SNP [dm6]	G	A	2.194e^-4	0.665	INTRON Lim3	TF binding site BDTNP1_TFBS_dl
2L	9864598	2L_9864598_SNP [dm3] 2L_9864598_SNP [dm6]	T	C	2.196e^-4	0.665	INTRON nAChRalpha6
3L	14330900	3L_14330900_SNP [dm3] 3L_14337800_SNP [dm6]	A	T	2.199e^-4	0.665	INTRON fz
2L	5331236	2L_5331236_DEL [dm3] 2L_5331236_DEL [dm6]	ACTAC	A	2.203e^-4	0.665	DOWNSTREAM TotM INTRON fusl
2L	10279183	2L_10279183_SNP [dm3] 2L_10279183_SNP [dm6]	G	T	2.206e^-4	0.665	NON_SYNONYMOUS_CODING CG34043 UPSTREAM Utx	TF binding site BDTNP1_TFBS_dl
2L	5381875	2L_5381875_SNP [dm3] 2L_5381875_SNP [dm6]	C	A	2.213e^-4	0.665	UPSTREAM CR42850 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	9696348	3L_9696348_SNP [dm3] 3L_9703248_SNP [dm6]	C	A	2.224e^-4	0.665	NON_SYNONYMOUS_CODING CG6761	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	8541865	2L_8541865_SNP [dm3] 2L_8541865_SNP [dm6]	A	C	2.227e^-4	0.665	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	8406971	3L_8406971_SNP [dm3] 3L_8413871_SNP [dm6]	T	C	2.236e^-4	0.665	UTR_3_PRIME mtrm INTRON Exo70
3R	7719034	3R_7719034_SNP [dm3] 3R_11893312_SNP [dm6]	G	A	2.237e^-4	0.665	UPSTREAM CG6971 DOWNSTREAM CG31368 & 1 other INTERGENIC
2R	13516285	2R_13516285_SNP [dm3] 2R_17628780_SNP [dm6]	A	T	2.244e^-4	0.665	INTRON CG10936 & 1 other
3R	24751456	3R_24751456_SNP [dm3] 3R_28925734_SNP [dm6]	G	A	2.249e^-4	0.665	SPLICE_SITE_REGION CG14521 DOWNSTREAM CG11828 INTRON CG14521
2R	1326001	2R_1326001_SNP [dm3] 2R_5438496_SNP [dm6]	C	T	2.252e^-4	0.665	INTRON laccase2
3R	21043422	3R_21043422_SNP [dm3] 3R_25217700_SNP [dm6]	G	A	2.253e^-4	0.665	SPLICE_SITE_REGION CG31106 INTRON CG31106
3R	22930341	3R_22930341_SNP [dm3] 3R_27104619_SNP [dm6]	G	A	2.259e^-4	0.665	INTRON CG6074
3R	22931017	3R_22931017_SNP [dm3] 3R_27105295_SNP [dm6]	G	A	2.259e^-4	0.665	INTRON CG6074
3R	22931734	3R_22931734_SNP [dm3] 3R_27106012_SNP [dm6]	G	C	2.259e^-4	0.665	INTRON CG6074
3R	22946992	3R_22946992_SNP [dm3] 3R_27121270_SNP [dm6]	C	G	2.259e^-4	0.665	SPLICE_SITE_REGION CG5882 DOWNSTREAM CG6059 INTRON CG5882	TF binding site mE1_TFBS_cad
3R	22947018	3R_22947018_SNP [dm3] 3R_27121296_SNP [dm6]	G	A	2.259e^-4	0.665	DOWNSTREAM CG6059 INTRON CG5882	TF binding site mE1_TFBS_cad
3R	22947020	3R_22947020_SNP [dm3] 3R_27121298_SNP [dm6]	T	C	2.259e^-4	0.665	DOWNSTREAM CG6059 INTRON CG5882	TF binding site mE1_TFBS_cad
3R	22947515	3R_22947515_SNP [dm3] 3R_27121793_SNP [dm6]	C	G	2.259e^-4	0.665	SYNONYMOUS_CODING CG6059 DOWNSTREAM CG5882
2L	11734394	2L_11734394_SNP [dm3] 2L_11734394_SNP [dm6]	T	A	2.259e^-4	0.665	INTERGENIC
2L	8541845	2L_8541845_SNP [dm3] 2L_8541845_SNP [dm6]	T	C	2.260e^-4	0.665	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	15747883	2R_15747883_INS [dm3] 2R_19860378_INS [dm6]	T	TGTAT	2.262e^-4	0.665	UPSTREAM CR44570 INTRON CR44571
2R	17098497	2R_17098497_SNP [dm3] 2R_21210992_SNP [dm6]	A	G	2.262e^-4	0.665	UTR_5_PRIME CG44245 DOWNSTREAM Glycogenin INTRON CG44245
2L	8541908	2L_8541908_SNP [dm3] 2L_8541908_SNP [dm6]	A	G	2.262e^-4	0.665	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
2L	15392620	2L_15392620_SNP [dm3] 2L_15392620_SNP [dm6]	T	C	2.264e^-4	0.665	INTERGENIC
2R	7039114	2R_7039114_SNP [dm3] 2R_11151609_SNP [dm6]	C	G	2.270e^-4	0.665	INTRON CG13229
2R	19306885	2R_19306885_SNP [dm3] 2R_23419362_SNP [dm6]	A	G	2.274e^-4	0.665	INTRON CG9812
3R	16413934	3R_16413934_SNP [dm3] 3R_20588212_SNP [dm6]	C	T	2.277e^-4	0.665	SYNONYMOUS_CODING Sep2 UTR_5_PRIME Sep2 UPSTREAM Srp72	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
3L	18352929	3L_18352929_SNP [dm3] 3L_18359829_SNP [dm6]	A	G	2.278e^-4	0.665	INTERGENIC	TF binding site mE1_TFBS_cad
3L	1277350	3L_1277350_SNP [dm3] 3L_1277350_SNP [dm6]	C	T	2.283e^-4	0.665	INTRON CG32333
2L	13099164	2L_13099164_SNP [dm3] 2L_13099164_SNP [dm6]	A	C	2.285e^-4	0.665	INTERGENIC
X	16531604	X_16531604_SNP [dm3] X_16637571_SNP [dm6]	G	A	2.291e^-4	0.665	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2L	15093128	2L_15093128_SNP [dm3] 2L_15093128_SNP [dm6]	A	T	2.293e^-4	0.665	INTRON CG15270
3L	3370205	3L_3370205_SNP [dm3] 3L_3370205_SNP [dm6]	T	G	2.293e^-4	0.665	DOWNSTREAM YT521-B & 1 other INTERGENIC
2R	10308648	2R_10308648_SNP [dm3] 2R_14421143_SNP [dm6]	G	A	2.298e^-4	0.665	SYNONYMOUS_CODING CG17386	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
3R	6255457	3R_6255457_SNP [dm3] 3R_10429735_SNP [dm6]	T	A	2.302e^-4	0.665	INTERGENIC
2R	9969203	2R_9969203_SNP [dm3] 2R_14081698_SNP [dm6]	C	G	2.302e^-4	0.665	INTRON Prosap
2R	10745485	2R_10745485_SNP [dm3] 2R_14857980_SNP [dm6]	G	A	2.307e^-4	0.665	SYNONYMOUS_CODING CG33506 DOWNSTREAM HPS1 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	20402883	3R_20402883_SNP [dm3] 3R_24577161_SNP [dm6]	T	C	2.310e^-4	0.665	INTRON CG13624	TF binding site mE1_TFBS_Trl
3R	26750975	3R_26750975_SNP [dm3] 3R_30925253_SNP [dm6]	G	A	2.310e^-4	0.665	INTRON Ptx1	TF binding site BDTNP1_TFBS_twi
2R	13516233	2R_13516233_SNP [dm3] 2R_17628728_SNP [dm6]	G	A	2.326e^-4	0.665	UTR_3_PRIME rhi INTRON CG10936
2L	12138364	2L_12138364_SNP [dm3] 2L_12138364_SNP [dm6]	C	T	2.327e^-4	0.665	SYNONYMOUS_CODING Gr33a
3R	26039882	3R_26039882_SNP [dm3] 3R_30214160_SNP [dm6]	A	T	2.330e^-4	0.665	UPSTREAM CecB INTERGENIC
2R	18322953	2R_18322953_SNP [dm3] 2R_22435448_SNP [dm6]	T	C	2.331e^-4	0.665	INTERGENIC
3L	12718532	3L_12718532_DEL [dm3] 3L_12725432_DEL [dm6]	AA	A	2.333e^-4	0.665	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	7607572	3L_7607572_SNP [dm3] 3L_7614472_SNP [dm6]	T	A	2.336e^-4	0.665	INTRON CG33275
X	2259602	X_2259602_INS [dm3] X_2365569_INS [dm6]	A	AAC	2.344e^-4	0.665	INTRON ptr
3R	24771137	3R_24771137_SNP [dm3] 3R_28945415_SNP [dm6]	A	G	2.346e^-4	0.665	INTRON CG14521
2L	7743644	2L_7743644_SNP [dm3] 2L_7743644_SNP [dm6]	T	A	2.350e^-4	0.665	DOWNSTREAM CG7214 INTERGENIC
2L	6349445	2L_6349445_SNP [dm3] 2L_6349445_SNP [dm6]	A	C	2.352e^-4	0.665	UTR_3_PRIME CG9498
2R	15748029	2R_15748029_SNP [dm3] 2R_19860524_SNP [dm6]	A	C	2.359e^-4	0.665	UPSTREAM CR44570 INTRON CR44571
X	4979589	X_4979589_SNP [dm3] X_5085556_SNP [dm6]	T	A	2.360e^-4	0.665	UPSTREAM rg & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2R	17087207	2R_17087207_SNP [dm3] 2R_21199702_SNP [dm6]	C	G	2.367e^-4	0.665	UPSTREAM Glycogenin & 1 other DOWNSTREAM Lapsyn INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
2L	12138316	2L_12138316_SNP [dm3] 2L_12138316_SNP [dm6]	T	C	2.367e^-4	0.665	SYNONYMOUS_CODING Gr33a
2R	10956484	2R_10956484_SNP [dm3] 2R_15068979_SNP [dm6]	G	T	2.372e^-4	0.665	INTERGENIC
3L	15580951	3L_15580951_SNP [dm3] 3L_15587851_SNP [dm6]	T	C	2.377e^-4	0.665	UTR_5_PRIME CG7656 INTRON CG7656	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_shn mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
3L	14115795	3L_14115795_SNP [dm3] 3L_14122695_SNP [dm6]	A	T	2.381e^-4	0.665	INTRON Sox21b
3L	14115797	3L_14115797_SNP [dm3] 3L_14122697_SNP [dm6]	C	T	2.381e^-4	0.665	INTRON Sox21b
3L	10848572	3L_10848572_SNP [dm3] 3L_10855472_SNP [dm6]	G	A	2.382e^-4	0.665	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	9804408	2L_9804408_SNP [dm3] 2L_9804408_SNP [dm6]	G	A	2.382e^-4	0.665	INTRON nAChRalpha6
2R	6995301	2R_6995301_SNP [dm3] 2R_11107796_SNP [dm6]	C	A	2.383e^-4	0.665	UPSTREAM luna INTRON luna	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	21957481	3R_21957481_SNP [dm3] 3R_26131759_SNP [dm6]	A	C	2.387e^-4	0.665	INTERGENIC
3R	21957484	3R_21957484_SNP [dm3] 3R_26131762_SNP [dm6]	G	A	2.387e^-4	0.665	INTERGENIC
3L	10177555	3L_10177555_SNP [dm3] 3L_10184455_SNP [dm6]	G	A	2.389e^-4	0.665	INTRON dpr10
X	7439140	X_7439140_SNP [dm3] X_7545107_SNP [dm6]	C	T	2.392e^-4	0.665	INTRON CG32719
3R	26112558	3R_26112558_SNP [dm3] 3R_30286836_SNP [dm6]	C	T	2.402e^-4	0.666	INTRON hdc	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	17360109	3L_17360109_SNP [dm3] 3L_17367009_SNP [dm6]	A	G	2.412e^-4	0.667	DOWNSTREAM Cad74A EXON CR45688	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	22566847	2L_22566847_SNP [dm3] 2L_22674115_SNP [dm6]	C	T	2.413e^-4	0.667	INTRON CG40006
2L	8470279	2L_8470279_SNP [dm3] 2L_8470279_SNP [dm6]	C	T	2.415e^-4	0.667	INTRON d	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5037187	2L_5037187_SNP [dm3] 2L_5037187_SNP [dm6]	C	A	2.432e^-4	0.671	UTR_3_PRIME Cg25C UPSTREAM SP555 & 1 other DOWNSTREAM Cg25C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_Trl
2R	10918367	2R_10918367_SNP [dm3] 2R_15030862_SNP [dm6]	C	T	2.437e^-4	0.671	INTRON hbs	TF binding site mE1_TFBS_cad
2R	14752382	2R_14752382_SNP [dm3] 2R_18864877_SNP [dm6]	G	A	2.446e^-4	0.671	UTR_3_PRIME CG43071 UPSTREAM Dpt DOWNSTREAM CG43070
2R	7151066	2R_7151066_SNP [dm3] 2R_11263561_SNP [dm6]	C	G	2.447e^-4	0.671	INTERGENIC
2L	11710689	2L_11710689_SNP [dm3] 2L_11710689_SNP [dm6]	T	A	2.452e^-4	0.671	INTERGENIC
2L	15093724	2L_15093724_SNP [dm3] 2L_15093724_SNP [dm6]	C	T	2.460e^-4	0.671	INTRON CG15270
2R	10419782	2R_10419782_SNP [dm3] 2R_14532277_SNP [dm6]	A	C	2.466e^-4	0.671	INTRON ttv
2R	12559043	2R_12559043_SNP [dm3] 2R_16671538_SNP [dm6]	C	T	2.466e^-4	0.671	SYNONYMOUS_CODING CG34457 UPSTREAM CG34458
X	16336438	X_16336438_SNP [dm3] X_16442405_SNP [dm6]	G	C	2.466e^-4	0.671	INTRON rngo	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sbb
3R	26359251	3R_26359251_SNP [dm3] 3R_30533529_SNP [dm6]	G	A	2.467e^-4	0.671	INTRON tmod
2L	21731827	2L_21731827_SNP [dm3] 2L_21731827_SNP [dm6]	C	G	2.476e^-4	0.673	INTERGENIC	transposable element FlyBase
2R	9471652	2R_9471652_SNP [dm3] 2R_13584147_SNP [dm6]	C	T	2.504e^-4	0.678	INTRON CG6191 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_Dll mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
3L	10783106	3L_10783106_INS [dm3] 3L_10790006_INS [dm6]	A	ACAAATTCAATTAAAAAAA...	2.518e^-4	0.678	DOWNSTREAM CR44545 INTERGENIC
3L	8222957	3L_8222957_SNP [dm3] 3L_8229857_SNP [dm6]	G	C	2.519e^-4	0.678	SYNONYMOUS_CODING eIF4E-3
3L	4570664	3L_4570664_SNP [dm3] 3L_4570664_SNP [dm6]	T	C	2.519e^-4	0.678	INTRON CG42540
3L	11103352	3L_11103352_SNP [dm3] 3L_11110252_SNP [dm6]	G	A	2.525e^-4	0.678	NON_SYNONYMOUS_CODING CG7638 UPSTREAM CG34012	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3R	21027545	3R_21027545_SNP [dm3] 3R_25201823_SNP [dm6]	T	C	2.526e^-4	0.678	INTRON CG13654 & 1 other
2R	14752407	2R_14752407_SNP [dm3] 2R_18864902_SNP [dm6]	A	T	2.527e^-4	0.678	UTR_3_PRIME CG43071 UPSTREAM Dpt DOWNSTREAM CG43070
3L	10565942	3L_10565942_SNP [dm3] 3L_10572842_SNP [dm6]	T	G	2.532e^-4	0.678	INTRON A2bp1
3L	1670335	3L_1670335_DEL [dm3] 3L_1670335_DEL [dm6]	GGGCTG	G	2.534e^-4	0.678	UPSTREAM RabX5 DOWNSTREAM CG13930 INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	10822833	2R_10822833_SNP [dm3] 2R_14935328_SNP [dm6]	A	G	2.534e^-4	0.678	UPSTREAM Lap1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
3R	16413668	3R_16413668_SNP [dm3] 3R_20587946_SNP [dm6]	A	T	2.535e^-4	0.678	UTR_5_PRIME Sep2 UPSTREAM Srp72 INTRON Sep2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	22941685	3R_22941685_SNP [dm3] 3R_27115963_SNP [dm6]	C	T	2.546e^-4	0.679	SYNONYMOUS_CODING CG6066 UPSTREAM CG5880 DOWNSTREAM CG5815	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2R	7023740	2R_7023740_SNP [dm3] 2R_11136235_SNP [dm6]	A	G	2.552e^-4	0.679	INTRON BBS4
3R	11436269	3R_11436269_SNP [dm3] 3R_15610547_SNP [dm6]	T	C	2.553e^-4	0.679	INTERGENIC
3R	25951988	3R_25951988_SNP [dm3] 3R_30126266_SNP [dm6]	T	C	2.555e^-4	0.679	SYNONYMOUS_CODING Ppi1	TF binding site mE1_TFBS_chinmo
3L	8012819	3L_8012819_SNP [dm3] 3L_8019719_SNP [dm6]	C	T	2.561e^-4	0.679	INTRON nmo
2R	10745598	2R_10745598_SNP [dm3] 2R_14858093_SNP [dm6]	G	A	2.562e^-4	0.679	SYNONYMOUS_CODING CG33506 DOWNSTREAM HPS1 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2R	9471516	2R_9471516_SNP [dm3] 2R_13584011_SNP [dm6]	T	A	2.564e^-4	0.679	INTRON CG6191 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_Dll mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr
3R	24824036	3R_24824036_SNP [dm3] 3R_28998314_SNP [dm6]	C	T	2.573e^-4	0.68	INTRON wat
3R	9281317	3R_9281317_SNP [dm3] 3R_13455595_SNP [dm6]	T	G	2.580e^-4	0.68	INTRON CG14372 EXON CR17025
2L	12138388	2L_12138388_SNP [dm3] 2L_12138388_SNP [dm6]	C	T	2.583e^-4	0.68	SYNONYMOUS_CODING Gr33a
2L	9874000	2L_9874000_SNP [dm3] 2L_9874000_SNP [dm6]	A	T	2.589e^-4	0.68	INTRON nAChRalpha6
2R	10066365	2R_10066365_DEL [dm3] 2R_14178860_DEL [dm6]	GT	G	2.590e^-4	0.68	INTRON cg	TF binding site mE1_TFBS_HSA
3R	22291467	3R_22291467_SNP [dm3] 3R_26465745_SNP [dm6]	T	G	2.590e^-4	0.68	INTRON CG5455
3L	18442983	3L_18442983_SNP [dm3] 3L_18449883_SNP [dm6]	A	T	2.594e^-4	0.68	INTERGENIC
3R	10055462	3R_10055462_SNP [dm3] 3R_14229740_SNP [dm6]	A	G	2.601e^-4	0.681	UPSTREAM CG9624 INTERGENIC
3L	5843236	3L_5843236_SNP [dm3] 3L_5850136_SNP [dm6]	T	A	2.611e^-4	0.682	INTERGENIC
3L	8019464	3L_8019464_SNP [dm3] 3L_8026364_SNP [dm6]	T	C	2.616e^-4	0.682	INTRON nmo
3L	18461103	3L_18461103_SNP [dm3] 3L_18468003_SNP [dm6]	A	G	2.625e^-4	0.682	INTERGENIC
2R	19598184	2R_19598184_SNP [dm3] 2R_23710661_SNP [dm6]	G	A	2.627e^-4	0.682	UPSTREAM l_2_not DOWNSTREAM CR45326 INTERGENIC
X	16148558	X_16148558_SNP [dm3] X_16254525_SNP [dm6]	G	A	2.630e^-4	0.682	UPSTREAM snRNA:U2:14B & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9323744	3R_9323744_SNP [dm3] 3R_13498022_SNP [dm6]	C	T	2.640e^-4	0.682	INTERGENIC
3R	11366703	3R_11366703_SNP [dm3] 3R_15540981_SNP [dm6]	G	A	2.645e^-4	0.682	INTRON CG18519	TF binding site mE1_TFBS_chinmo
X	8240645	X_8240645_SNP [dm3] X_8346612_SNP [dm6]	T	G	2.646e^-4	0.682	INTRON nAChRalpha3
2R	17475300	2R_17475300_SNP [dm3] 2R_21587795_SNP [dm6]	T	G	2.647e^-4	0.682	INTERGENIC	TF binding site mE1_TFBS_cad
3R	19860086	3R_19860086_SNP [dm3] 3R_24034364_SNP [dm6]	C	T	2.652e^-4	0.682	UTR_3_PRIME Miro DOWNSTREAM Ime4
3R	21626136	3R_21626136_SNP [dm3] 3R_25800414_SNP [dm6]	G	A	2.652e^-4	0.682	INTERGENIC
3R	16413639	3R_16413639_SNP [dm3] 3R_20587917_SNP [dm6]	C	T	2.655e^-4	0.682	UTR_5_PRIME Sep2 UPSTREAM Srp72 INTRON Sep2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	15819726	2L_15819726_SNP [dm3] 2L_15819726_SNP [dm6]	C	A	2.658e^-4	0.682	INTERGENIC	TF binding site mE1_TFBS_run
3R	7720478	3R_7720478_SNP [dm3] 3R_11894756_SNP [dm6]	T	C	2.680e^-4	0.682	INTRON Cad87A
3L	1287092	3L_1287092_SNP [dm3] 3L_1287092_SNP [dm6]	T	C	2.684e^-4	0.682	INTRON CG32333
2L	5134615	2L_5134615_SNP [dm3] 2L_5134615_SNP [dm6]	A	C	2.686e^-4	0.682	NON_SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_sens
3R	9784456	3R_9784456_SNP [dm3] 3R_13958734_SNP [dm6]	C	T	2.699e^-4	0.682	UPSTREAM Ipp INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8189829	2L_8189829_SNP [dm3] 2L_8189829_SNP [dm6]	T	C	2.709e^-4	0.682	UTR_3_PRIME Piezo DOWNSTREAM CG34134 & 1 other
3R	21038771	3R_21038771_SNP [dm3] 3R_25213049_SNP [dm6]	C	T	2.710e^-4	0.682	SYNONYMOUS_CODING CG13654	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	18629469	2R_18629469_SNP [dm3] 2R_22741964_SNP [dm6]	T	G	2.713e^-4	0.682	UTR_3_PRIME CG42260
3L	14331432	3L_14331432_SNP [dm3] 3L_14338332_SNP [dm6]	A	G	2.719e^-4	0.682	INTRON fz	TF binding site BDTNP1_TFBS_dl
2R	8897288	2R_8897288_SNP [dm3] 2R_13009783_SNP [dm6]	T	A	2.719e^-4	0.682	INTERGENIC
X	19968952	X_19968952_SNP [dm3] X_20074919_SNP [dm6]	A	G	2.723e^-4	0.682	INTERGENIC
3L	12680948	3L_12680948_INS [dm3] 3L_12687848_INS [dm6]	G	GGTTTTCT	2.729e^-4	0.682	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9874062	2L_9874062_SNP [dm3] 2L_9874062_SNP [dm6]	C	T	2.731e^-4	0.682	INTRON nAChRalpha6
3R	16413579	3R_16413579_SNP [dm3] 3R_20587857_SNP [dm6]	A	T	2.735e^-4	0.682	UPSTREAM Srp72 INTRON Sep2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	19282918	2R_19282918_SNP [dm3] 2R_23395395_SNP [dm6]	T	C	2.742e^-4	0.682	UTR_5_PRIME CG3530 INTRON CG3530	TF binding site mE1_TFBS_Trl
3L	10565941	3L_10565941_SNP [dm3] 3L_10572841_SNP [dm6]	T	G	2.742e^-4	0.682	INTRON A2bp1
2L	13286608	2L_13286608_SNP [dm3] 2L_13286608_SNP [dm6]	T	A	2.745e^-4	0.682	UPSTREAM Uvrag & 1 other DOWNSTREAM CR44083 INTERGENIC	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	21030993	3R_21030993_SNP [dm3] 3R_25205271_SNP [dm6]	G	C	2.746e^-4	0.682	INTRON CG13654 & 1 other	TF binding site mE1_TFBS_cad
2R	15747265	2R_15747265_SNP [dm3] 2R_19859760_SNP [dm6]	A	G	2.748e^-4	0.682	UPSTREAM CR44571 EXON CR44570	TF binding site mE1_TFBS_cad
3R	16755034	3R_16755034_SNP [dm3] 3R_20929312_SNP [dm6]	C	T	2.750e^-4	0.682	DOWNSTREAM hdly INTRON CG31191
3R	16227635	3R_16227635_SNP [dm3] 3R_20401913_SNP [dm6]	T	C	2.751e^-4	0.682	INTRON Gfrl
2L	7084453	2L_7084453_SNP [dm3] 2L_7084453_SNP [dm6]	T	C	2.755e^-4	0.682	INTRON Pvf2	TF binding site mE1_TFBS_Trl
2R	10746396	2R_10746396_SNP [dm3] 2R_14858891_SNP [dm6]	T	G	2.756e^-4	0.682	UTR_3_PRIME U3-55K UPSTREAM CG33506	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
2R	7019573	2R_7019573_SNP [dm3] 2R_11132068_SNP [dm6]	T	C	2.756e^-4	0.682	INTERGENIC
2R	10887304	2R_10887304_SNP [dm3] 2R_14999799_SNP [dm6]	C	T	2.761e^-4	0.682	INTERGENIC
2L	15092117	2L_15092117_SNP [dm3] 2L_15092117_SNP [dm6]	C	T	2.762e^-4	0.682	SPLICE_SITE_REGION CG15270 INTRON CG15270
2R	9908868	2R_9908868_SNP [dm3] 2R_14021363_SNP [dm6]	G	C	2.763e^-4	0.682	INTRON mam
3L	13228492	3L_13228492_SNP [dm3] 3L_13235392_SNP [dm6]	T	A	2.768e^-4	0.682	INTRON caps
3L	8021317	3L_8021317_SNP [dm3] 3L_8028217_SNP [dm6]	T	A	2.769e^-4	0.682	DOWNSTREAM tRNA:CR32370 INTRON nmo	TF binding site mE1_TFBS_cad
2L	3485173	2L_3485173_SNP [dm3] 2L_3485173_SNP [dm6]	A	T	2.773e^-4	0.682	INTRON CG15414
2R	20489178	2R_20489178_SNP [dm3] 2R_24601655_SNP [dm6]	G	A	2.783e^-4	0.682	UTR_3_PRIME CG3548 UPSTREAM CG3565	TF binding site mE1_TFBS_chinmo
2L	5417345	2L_5417345_INS [dm3] 2L_5417345_INS [dm6]	A	ATTTCATTCTGTCA...	2.787e^-4	0.682	DOWNSTREAM H15 INTERGENIC	TF binding site mE1_TFBS_Kr
2L	15392630	2L_15392630_SNP [dm3] 2L_15392630_SNP [dm6]	C	G	2.789e^-4	0.682	INTERGENIC
2L	15392632	2L_15392632_SNP [dm3] 2L_15392632_SNP [dm6]	C	A	2.789e^-4	0.682	INTERGENIC
2L	15392633	2L_15392633_SNP [dm3] 2L_15392633_SNP [dm6]	C	T	2.789e^-4	0.682	INTERGENIC
3R	24162704	3R_24162704_SNP [dm3] 3R_28336982_SNP [dm6]	C	T	2.794e^-4	0.682	UPSTREAM larp DOWNSTREAM Gfat2 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	5860166	3L_5860166_SNP [dm3] 3L_5867066_SNP [dm6]	G	C	2.799e^-4	0.682	INTERGENIC
3L	9936725	3L_9936725_SNP [dm3] 3L_9943625_SNP [dm6]	A	T	2.799e^-4	0.682	INTRON CG34356
X	9325985	X_9325985_SNP [dm3] X_9431952_SNP [dm6]	A	T	2.805e^-4	0.682	INTRON mgl
3R	12838941	3R_12838941_SNP [dm3] 3R_17013219_SNP [dm6]	T	A	2.806e^-4	0.682	DOWNSTREAM CG8907 INTERGENIC
X	6257182	X_6257182_SNP [dm3] X_6363149_SNP [dm6]	T	G	2.808e^-4	0.682	UPSTREAM swaPsi DOWNSTREAM swa EXON swaPsi	TF binding site mE1_TFBS_inv
3L	17334115	3L_17334115_SNP [dm3] 3L_17341015_SNP [dm6]	T	A	2.808e^-4	0.682	NON_SYNONYMOUS_CODING CG13727	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	6257152	X_6257152_SNP [dm3] X_6363119_SNP [dm6]	T	G	2.811e^-4	0.682	UPSTREAM swaPsi DOWNSTREAM swa EXON swaPsi	TF binding site mE1_TFBS_inv
X	12866319	X_12866319_SNP [dm3] X_12972286_SNP [dm6]	T	C	2.820e^-4	0.682	NON_SYNONYMOUS_CODING CG15721 INTRON CR43636
3R	16898374	3R_16898374_SNP [dm3] 3R_21072652_SNP [dm6]	C	A	2.820e^-4	0.682	SYNONYMOUS_CODING r-l	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	10648820	3L_10648820_SNP [dm3] 3L_10655720_SNP [dm6]	A	G	2.826e^-4	0.682	INTRON CG32066
2R	14105647	2R_14105647_DEL [dm3] 2R_18218142_DEL [dm6]	GCCG	G	2.827e^-4	0.682	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	11105065	3L_11105065_SNP [dm3] 3L_11111965_SNP [dm6]	C	T	2.829e^-4	0.682	UTR_3_PRIME CG7638 DOWNSTREAM Sod
2L	18856734	2L_18856734_SNP [dm3] 2L_18856734_SNP [dm6]	T	C	2.829e^-4	0.682	SYNONYMOUS_CODING CG10602	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	11912585	X_11912585_INS [dm3] X_12018552_INS [dm6]	A	AAATT	2.832e^-4	0.682	UPSTREAM CG15735 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Stat92E mE1_TFBS_Ubx
2R	5666937	2R_5666937_SNP [dm3] 2R_9779432_SNP [dm6]	T	C	2.837e^-4	0.682	NON_SYNONYMOUS_CODING CG1688	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15929925	2R_15929925_SNP [dm3] 2R_20042420_SNP [dm6]	G	A	2.841e^-4	0.682	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3R	25844078	3R_25844078_SNP [dm3] 3R_30018356_SNP [dm6]	C	T	2.844e^-4	0.682	SYNONYMOUS_CODING Mgat2	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	4861949	2L_4861949_SNP [dm3] 2L_4861949_SNP [dm6]	C	T	2.845e^-4	0.682	INTRON pog
3L	11103297	3L_11103297_SNP [dm3] 3L_11110197_SNP [dm6]	G	A	2.860e^-4	0.685	SYNONYMOUS_CODING CG7638 UPSTREAM CG34012	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	8023775	3L_8023775_SNP [dm3] 3L_8030675_SNP [dm6]	T	A	2.865e^-4	0.685	INTRON nmo
3L	3565313	3L_3565313_SNP [dm3] 3L_3565313_SNP [dm6]	G	C	2.876e^-4	0.686	INTRON Eip63E
2R	6682174	2R_6682174_SNP [dm3] 2R_10794669_SNP [dm6]	T	G	2.881e^-4	0.686	INTRON CG33144
3L	14252747	3L_14252747_SNP [dm3] 3L_14259647_SNP [dm6]	C	T	2.882e^-4	0.686	INTERGENIC	TF binding site mE1_TFBS_inv
3R	12839082	3R_12839082_SNP [dm3] 3R_17013360_SNP [dm6]	A	C	2.884e^-4	0.686	DOWNSTREAM CG8907 INTERGENIC
2L	6350189	2L_6350189_SNP [dm3] 2L_6350189_SNP [dm6]	G	C	2.897e^-4	0.686	SYNONYMOUS_CODING CG9498	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	9386870	2L_9386870_DEL [dm3] 2L_9386870_DEL [dm6]	AAAAATAGCTAGTCATTCT...	C	2.909e^-4	0.686	UPSTREAM Aldh INTRON Shawl
2L	10531017	2L_10531017_SNP [dm3] 2L_10531017_SNP [dm6]	T	C	2.911e^-4	0.686	SYNONYMOUS_CODING Lip4 UPSTREAM CG18301
2R	4657345	2R_4657345_SNP [dm3] 2R_8769840_SNP [dm6]	A	T	2.915e^-4	0.686	INTERGENIC
3L	4614894	3L_4614894_SNP [dm3] 3L_4614894_SNP [dm6]	T	A	2.920e^-4	0.686	INTRON Src64B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	7868429	3L_7868429_SNP [dm3] 3L_7875329_SNP [dm6]	C	T	2.922e^-4	0.686	INTRON CG32365	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
3R	20395859	3R_20395859_SNP [dm3] 3R_24570137_SNP [dm6]	T	C	2.928e^-4	0.686	INTRON CG13624
3L	14596071	3L_14596071_SNP [dm3] 3L_14602971_SNP [dm6]	T	G	2.931e^-4	0.686	INTERGENIC	TF binding site mE1_TFBS_Kr
2R	19690329	2R_19690329_SNP [dm3] 2R_23802806_SNP [dm6]	C	A	2.933e^-4	0.686	UTR_3_PRIME CG30177
3L	11107175	3L_11107175_SNP [dm3] 3L_11114075_SNP [dm6]	T	A	2.934e^-4	0.686	UPSTREAM Sod DOWNSTREAM fd68A INTERGENIC	TF binding site mE1_TFBS_HSA
2R	10534471	2R_10534471_SNP [dm3] 2R_14646966_SNP [dm6]	A	C	2.939e^-4	0.686	DOWNSTREAM CG10139 INTERGENIC
2R	18155487	2R_18155487_INS [dm3] 2R_22267982_INS [dm6]	T	TCT	2.939e^-4	0.686	INTRON dve	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	23774323	3R_23774323_SNP [dm3] 3R_27948601_SNP [dm6]	C	T	2.945e^-4	0.686	UPSTREAM Gp93 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
X	9587962	X_9587962_SNP [dm3] X_9693929_SNP [dm6]	C	A	2.945e^-4	0.686	UPSTREAM btd INTERGENIC	regulatory region FlyBase REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	15093108	2L_15093108_SNP [dm3] 2L_15093108_SNP [dm6]	C	T	2.951e^-4	0.686	INTRON CG15270
3R	14795572	3R_14795572_SNP [dm3] 3R_18969850_SNP [dm6]	C	T	2.968e^-4	0.686	SYNONYMOUS_CODING CG42613 UTR_3_PRIME CG43732
3R	19852343	3R_19852343_SNP [dm3] 3R_24026621_SNP [dm6]	G	C	2.969e^-4	0.686	INTRON KrT95D	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26566963	3R_26566963_SNP [dm3] 3R_30741241_SNP [dm6]	G	T	2.970e^-4	0.686	INTERGENIC
2R	10674702	2R_10674702_SNP [dm3] 2R_14787197_SNP [dm6]	G	A	2.982e^-4	0.686	INTRON kn
3L	4924513	3L_4924513_SNP [dm3] 3L_4924513_SNP [dm6]	C	T	2.982e^-4	0.686	INTERGENIC
X	8145753	X_8145753_SNP [dm3] X_8251720_SNP [dm6]	G	A	2.990e^-4	0.686	UPSTREAM ND75 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3L	11626407	3L_11626407_SNP [dm3] 3L_11633307_SNP [dm6]	A	G	2.990e^-4	0.686	UPSTREAM CR45158 INTRON CG32091
3R	15839086	3R_15839086_SNP [dm3] 3R_20013364_SNP [dm6]	T	A	2.990e^-4	0.686	UPSTREAM CG4836 INTRON CG17190
2R	19289714	2R_19289714_SNP [dm3] 2R_23402191_SNP [dm6]	G	C	2.992e^-4	0.686	UTR_5_PRIME CG3520	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3R	2348815	3R_2348815_SNP [dm3] 3R_6523093_SNP [dm6]	A	G	2.995e^-4	0.686	INTERGENIC
3L	16421458	3L_16421458_SNP [dm3] 3L_16428358_SNP [dm6]	T	A	3.000e^-4	0.686	INTRON CG33158 & 1 other
3L	13896153	3L_13896153_SNP [dm3] 3L_13903053_SNP [dm6]	A	T	3.002e^-4	0.686	UTR_5_PRIME dysc
X	557374	X_557374_SNP [dm3] X_663341_SNP [dm6]	G	C	3.006e^-4	0.686	INTERGENIC	TF binding site mE1_TFBS_sens
3R	9262729	3R_9262729_SNP [dm3] 3R_13437007_SNP [dm6]	T	G	3.006e^-4	0.686	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	15544597	2L_15544597_SNP [dm3] 2L_15544597_SNP [dm6]	G	A	3.008e^-4	0.686	INTERGENIC
3L	16150759	3L_16150759_SNP [dm3] 3L_16157659_SNP [dm6]	C	T	3.011e^-4	0.686	INTRON CG5151
2L	15092161	2L_15092161_SNP [dm3] 2L_15092161_SNP [dm6]	T	C	3.013e^-4	0.686	SYNONYMOUS_CODING CG15270
3R	12840081	3R_12840081_INS [dm3] 3R_17014359_INS [dm6]	A	AA	3.014e^-4	0.686	UPSTREAM Pxd INTERGENIC
3L	7534517	3L_7534517_SNP [dm3] 3L_7541417_SNP [dm6]	G	A	3.015e^-4	0.686	UPSTREAM CG32374 DOWNSTREAM CG32376 INTERGENIC
3L	7535003	3L_7535003_SNP [dm3] 3L_7541903_SNP [dm6]	G	A	3.017e^-4	0.686	SYNONYMOUS_CODING CG32376 UPSTREAM CG32374	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	13240458	3L_13240458_SNP [dm3] 3L_13247358_SNP [dm6]	C	T	3.018e^-4	0.686	SYNONYMOUS_CODING CG32119 INTRON caps	TF binding site mE1_TFBS_HSA
3L	2456817	3L_2456817_SNP [dm3] 3L_2456817_SNP [dm6]	T	C	3.019e^-4	0.686	UTR_5_PRIME CG45186 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	17092812	2R_17092812_SNP [dm3] 2R_21205307_SNP [dm6]	C	T	3.023e^-4	0.686	SPLICE_SITE_REGION Glycogenin INTRON CG44245 & 1 other
3L	8011972	3L_8011972_SNP [dm3] 3L_8018872_SNP [dm6]	C	T	3.036e^-4	0.686	INTRON nmo
2L	15005115	2L_15005115_SNP [dm3] 2L_15005115_SNP [dm6]	G	A	3.041e^-4	0.686	UPSTREAM dyn-p25 INTERGENIC
2L	9417110	2L_9417110_SNP [dm3] 2L_9417110_SNP [dm6]	G	A	3.041e^-4	0.686	INTRON Mco1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	9417129	2L_9417129_SNP [dm3] 2L_9417129_SNP [dm6]	T	A	3.041e^-4	0.686	INTRON Mco1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	7677260	2R_7677260_INS [dm3] 2R_11789755_INS [dm6]	A	AA	3.044e^-4	0.686	UPSTREAM ths & 1 other INTRON ths	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16504053	2L_16504053_INS [dm3] 2L_16504053_INS [dm6]	T	TC	3.046e^-4	0.686	INTRON Tpr2
X	9226096	X_9226096_SNP [dm3] X_9332063_SNP [dm6]	T	A	3.057e^-4	0.686	INTRON CG34449
3R	21518257	3R_21518257_SNP [dm3] 3R_25692535_SNP [dm6]	T	G	3.058e^-4	0.686	INTERGENIC
3L	7246328	3L_7246328_SNP [dm3] 3L_7253228_SNP [dm6]	C	A	3.058e^-4	0.686	DOWNSTREAM CR43470 INTRON CG14830
X	10172865	X_10172865_SNP [dm3] X_10278832_SNP [dm6]	T	G	3.062e^-4	0.686	SYNONYMOUS_CODING alpha-Man-I
3R	24126993	3R_24126993_SNP [dm3] 3R_28301271_SNP [dm6]	C	T	3.063e^-4	0.686	INTERGENIC
X	12571493	X_12571493_SNP [dm3] X_12677460_SNP [dm6]	G	C	3.064e^-4	0.686	INTRON Tis11	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	9277463	3R_9277463_SNP [dm3] 3R_13451741_SNP [dm6]	T	A	3.079e^-4	0.688	INTRON CG14372
2L	5134617	2L_5134617_SNP [dm3] 2L_5134617_SNP [dm6]	A	T	3.081e^-4	0.688	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_sens
2L	16108418	2L_16108418_SNP [dm3] 2L_16108418_SNP [dm6]	C	A	3.085e^-4	0.688	INTERGENIC
X	16337156	X_16337156_SNP [dm3] X_16443123_SNP [dm6]	G	A	3.090e^-4	0.688	INTRON rngo	TF binding site BDTNP1_TFBS_dl
2L	6736482	2L_6736482_SNP [dm3] 2L_6736482_SNP [dm6]	C	T	3.093e^-4	0.688	SYNONYMOUS_CODING TTLL3A DOWNSTREAM TTLL3B	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
2L	10530912	2L_10530912_SNP [dm3] 2L_10530912_SNP [dm6]	C	T	3.103e^-4	0.688	SYNONYMOUS_CODING Lip4 UPSTREAM CG18301
3L	3020028	3L_3020028_SNP [dm3] 3L_3020028_SNP [dm6]	C	T	3.106e^-4	0.688	INTERGENIC
3R	11473194	3R_11473194_SNP [dm3] 3R_15647472_SNP [dm6]	A	T	3.106e^-4	0.688	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	19035420	2R_19035420_SNP [dm3] 2R_23147897_SNP [dm6]	C	T	3.114e^-4	0.688	INTERGENIC
3L	10717741	3L_10717741_SNP [dm3] 3L_10724641_SNP [dm6]	G	A	3.116e^-4	0.688	INTERGENIC
3L	5841774	3L_5841774_SNP [dm3] 3L_5848674_SNP [dm6]	G	A	3.118e^-4	0.688	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3L	11622184	3L_11622184_SNP [dm3] 3L_11629084_SNP [dm6]	G	A	3.119e^-4	0.688	SYNONYMOUS_CODING CG18815 UPSTREAM mir-3642	TF binding site mE1_TFBS_chinmo
3L	10847880	3L_10847880_DEL [dm3] 3L_10854780_DEL [dm6]	CA	G	3.129e^-4	0.689	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	3902907	2R_3902907_SNP [dm3] 2R_8015402_SNP [dm6]	A	T	3.131e^-4	0.689	DOWNSTREAM mir-4981 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	19052371	2R_19052371_SNP [dm3] 2R_23164848_SNP [dm6]	A	G	3.137e^-4	0.689	SYNONYMOUS_CODING CG34371
3L	10847209	3L_10847209_SNP [dm3] 3L_10854109_SNP [dm6]	C	T	3.141e^-4	0.689	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9777951	3R_9777951_DEL [dm3] 3R_13952229_DEL [dm6]	ACA	A	3.142e^-4	0.689	INTERGENIC
2R	18443590	2R_18443590_SNP [dm3] 2R_22556085_SNP [dm6]	G	A	3.143e^-4	0.689	SYNONYMOUS_CODING px	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	18420901	X_18420901_SNP [dm3] X_18526868_SNP [dm6]	T	C	3.148e^-4	0.689	UTR_3_PRIME CG15042 INTRON Bx	TF binding site mE1_TFBS_inv
X	19357226	X_19357226_SNP [dm3] X_19463193_SNP [dm6]	A	C	3.152e^-4	0.689	INTRON kek5
3R	16064480	3R_16064480_SNP [dm3] 3R_20238758_SNP [dm6]	T	A	3.161e^-4	0.689	INTRON Nlg4
3L	2055449	3L_2055449_SNP [dm3] 3L_2055449_SNP [dm6]	A	C	3.164e^-4	0.689	SYNONYMOUS_CODING sls INTRON sls	TF binding site mE1_TFBS_sens
2L	7297922	2L_7297922_SNP [dm3] 2L_7297922_SNP [dm6]	A	G	3.168e^-4	0.689	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_twi
2L	8541958	2L_8541958_SNP [dm3] 2L_8541958_SNP [dm6]	C	A	3.169e^-4	0.689	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3L	12449413	3L_12449413_DEL [dm3] 3L_12456313_DEL [dm6]	AGTTAA	A	3.179e^-4	0.69	INTERGENIC
2R	11797411	2R_11797411_SNP [dm3] 2R_15909906_SNP [dm6]	T	G	3.182e^-4	0.69	INTRON sli	TF binding site mE1_TFBS_inv
2L	21731981	2L_21731981_SNP [dm3] 2L_21731981_SNP [dm6]	A	G	3.187e^-4	0.69	INTERGENIC	transposable element FlyBase
3R	22947833	3R_22947833_SNP [dm3] 3R_27122111_SNP [dm6]	G	A	3.190e^-4	0.69	SYNONYMOUS_CODING CG6059 DOWNSTREAM CG5882	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	10166266	2L_10166266_SNP [dm3] 2L_10166266_SNP [dm6]	T	A	3.196e^-4	0.69	INTRON CG44153
3R	16413582	3R_16413582_SNP [dm3] 3R_20587860_SNP [dm6]	A	G	3.198e^-4	0.69	UPSTREAM Srp72 INTRON Sep2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	7151061	2R_7151061_SNP [dm3] 2R_11263556_SNP [dm6]	G	A	3.199e^-4	0.69	INTERGENIC
2R	9471511	2R_9471511_SNP [dm3] 2R_13584006_SNP [dm6]	T	C	3.202e^-4	0.69	INTRON CG6191 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_Dll mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr
2L	12188114	2L_12188114_SNP [dm3] 2L_12188114_SNP [dm6]	G	A	3.212e^-4	0.691	INTRON aret
X	16332973	X_16332973_SNP [dm3] X_16438940_SNP [dm6]	G	A	3.212e^-4	0.691	UTR_3_PRIME CG9947 DOWNSTREAM CG9947 & 1 other
X	16531574	X_16531574_SNP [dm3] X_16637541_SNP [dm6]	T	C	3.225e^-4	0.692	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2R	16666690	2R_16666690_SNP [dm3] 2R_20779185_SNP [dm6]	T	C	3.227e^-4	0.692	SYNONYMOUS_CODING CG43711
3L	9149267	3L_9149267_SNP [dm3] 3L_9156167_SNP [dm6]	T	A	3.246e^-4	0.692	INTRON Rdl
3L	8022696	3L_8022696_SNP [dm3] 3L_8029596_SNP [dm6]	T	C	3.246e^-4	0.692	UPSTREAM tRNA:CR32370 INTRON nmo
3R	4264097	3R_4264097_SNP [dm3] 3R_8438375_SNP [dm6]	A	C	3.250e^-4	0.692	INTRON CG45263
3L	7998624	3L_7998624_SNP [dm3] 3L_8005524_SNP [dm6]	T	C	3.251e^-4	0.692	INTRON nmo	TF binding site BDTNP1_TFBS_dl
3R	22933075	3R_22933075_SNP [dm3] 3R_27107353_SNP [dm6]	A	T	3.251e^-4	0.692	INTERGENIC
3L	15442561	3L_15442561_SNP [dm3] 3L_15449461_SNP [dm6]	G	T	3.254e^-4	0.692	INTERGENIC
2R	15067824	2R_15067824_SNP [dm3] 2R_19180319_SNP [dm6]	G	T	3.255e^-4	0.692	INTRON hppy
2R	7183727	2R_7183727_SNP [dm3] 2R_11296222_SNP [dm6]	T	G	3.261e^-4	0.692	UPSTREAM CG42336 INTRON CG42336	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	3258463	3L_3258463_SNP [dm3] 3L_3258463_SNP [dm6]	A	T	3.261e^-4	0.692	UTR_5_PRIME ckd INTRON ckd
2L	15040416	2L_15040416_DEL [dm3] 2L_15040416_DEL [dm6]	GTCTT	G	3.264e^-4	0.692	INTRON Su_H_	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	934357	2L_934357_SNP [dm3] 2L_934357_SNP [dm6]	G	T	3.264e^-4	0.692	INTRON CG4341
3L	17142416	3L_17142416_SNP [dm3] 3L_17149316_SNP [dm6]	A	T	3.277e^-4	0.692	INTRON Rbp6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	11024193	2L_11024193_DEL [dm3] 2L_11024193_DEL [dm6]	GG	G	3.282e^-4	0.692	INTRON Samuel	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	12476322	3L_12476322_SNP [dm3] 3L_12483222_SNP [dm6]	T	A	3.284e^-4	0.692	INTRON CG10663 & 1 other
2L	9540664	2L_9540664_SNP [dm3] 2L_9540664_SNP [dm6]	T	C	3.288e^-4	0.692	SYNONYMOUS_CODING CG17855 DOWNSTREAM Oatp30B	TF binding site mE1_TFBS_bab1
2L	16895293	2L_16895293_SNP [dm3] 2L_16895293_SNP [dm6]	T	C	3.290e^-4	0.692	SYNONYMOUS_CODING tweek
3R	9890642	3R_9890642_SNP [dm3] 3R_14064920_SNP [dm6]	T	A	3.293e^-4	0.692	INTRON foxo	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	12140986	2L_12140986_SNP [dm3] 2L_12140986_SNP [dm6]	C	T	3.294e^-4	0.692	DOWNSTREAM Gr33a INTERGENIC
X	17383065	X_17383065_SNP [dm3] X_17489032_SNP [dm6]	A	C	3.296e^-4	0.692	UTR_5_PRIME CG43658 INTRON CG43658
2R	8835602	2R_8835602_SNP [dm3] 2R_12948097_SNP [dm6]	T	G	3.299e^-4	0.692	DOWNSTREAM CG44251 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	13599032	2L_13599032_SNP [dm3] 2L_13599032_SNP [dm6]	G	A	3.301e^-4	0.692	INTRON kuz
X	559663	X_559663_SNP [dm3] X_665630_SNP [dm6]	A	G	3.306e^-4	0.692	INTERGENIC	transposable element FlyBase
3L	6990115	3L_6990115_SNP [dm3] 3L_6997015_SNP [dm6]	C	T	3.316e^-4	0.692	INTERGENIC
3R	18169727	3R_18169727_SNP [dm3] 3R_22344005_SNP [dm6]	C	T	3.319e^-4	0.692	INTERGENIC
3R	18169731	3R_18169731_SNP [dm3] 3R_22344009_SNP [dm6]	A	T	3.319e^-4	0.692	INTERGENIC
X	4574117	X_4574117_SNP [dm3] X_4680084_SNP [dm6]	T	A	3.324e^-4	0.693	UTR_3_PRIME Pp2C1 UPSTREAM rap DOWNSTREAM Pp2C1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3L	14115787	3L_14115787_SNP [dm3] 3L_14122687_SNP [dm6]	A	G	3.332e^-4	0.694	INTRON Sox21b
3L	5404049	3L_5404049_SNP [dm3] 3L_5410949_SNP [dm6]	G	A	3.339e^-4	0.694	INTERGENIC
3L	18460578	3L_18460578_SNP [dm3] 3L_18467478_SNP [dm6]	C	G	3.340e^-4	0.694	INTERGENIC
2R	9905516	2R_9905516_INS [dm3] 2R_14018011_INS [dm6]	A	AT	3.348e^-4	0.694	INTRON mam
3L	3370131	3L_3370131_SNP [dm3] 3L_3370131_SNP [dm6]	C	T	3.358e^-4	0.695	DOWNSTREAM YT521-B & 1 other INTERGENIC
3R	22933096	3R_22933096_SNP [dm3] 3R_27107374_SNP [dm6]	C	A	3.370e^-4	0.695	INTERGENIC
3L	17217970	3L_17217970_SNP [dm3] 3L_17224870_SNP [dm6]	T	A	3.371e^-4	0.695	INTRON Rbp6
3L	17217973	3L_17217973_SNP [dm3] 3L_17224873_SNP [dm6]	C	T	3.371e^-4	0.695	INTRON Rbp6
3L	824650	3L_824650_SNP [dm3] 3L_824650_SNP [dm6]	A	G	3.375e^-4	0.695	INTERGENIC
3R	23601918	3R_23601918_SNP [dm3] 3R_27776196_SNP [dm6]	G	A	3.378e^-4	0.695	INTRON CG34353	TF binding site mE1_TFBS_chinmo
2R	19035432	2R_19035432_SNP [dm3] 2R_23147909_SNP [dm6]	T	C	3.380e^-4	0.695	INTERGENIC
3R	22933088	3R_22933088_SNP [dm3] 3R_27107366_SNP [dm6]	T	A	3.386e^-4	0.695	INTERGENIC
3R	22933094	3R_22933094_SNP [dm3] 3R_27107372_SNP [dm6]	C	T	3.386e^-4	0.695	INTERGENIC
2R	16954085	2R_16954085_SNP [dm3] 2R_21066580_SNP [dm6]	T	G	3.391e^-4	0.696	SYNONYMOUS_CODING Cht4	TF binding site mE1_TFBS_cad
2R	17191685	2R_17191685_SNP [dm3] 2R_21304180_SNP [dm6]	C	T	3.408e^-4	0.697	SYNONYMOUS_CODING CG42672	TF binding site mE1_TFBS_cad
3L	6463625	3L_6463625_SNP [dm3] 3L_6470525_SNP [dm6]	T	A	3.414e^-4	0.697	INTRON CG42747
3R	22933098	3R_22933098_SNP [dm3] 3R_27107376_SNP [dm6]	A	T	3.415e^-4	0.697	INTERGENIC
X	8158684	X_8158684_SNP [dm3] X_8264651_SNP [dm6]	G	A	3.417e^-4	0.697	INTRON CG1632	TF binding site BDTNP1_TFBS_dl
2L	12084553	2L_12084553_SNP [dm3] 2L_12084553_SNP [dm6]	A	G	3.418e^-4	0.697	SYNONYMOUS_CODING prd	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	19689481	2R_19689481_SNP [dm3] 2R_23801958_SNP [dm6]	G	C	3.420e^-4	0.697	NON_SYNONYMOUS_CODING CG30177	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	2696766	3L_2696766_SNP [dm3] 3L_2696766_SNP [dm6]	T	G	3.434e^-4	0.698	INTRON Fife
2L	9613253	2L_9613253_SNP [dm3] 2L_9613253_SNP [dm6]	A	T	3.434e^-4	0.698	UTR_5_PRIME Trx-2 UPSTREAM Trx-2 DOWNSTREAM gcm2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_zfh1
3R	16695733	3R_16695733_SNP [dm3] 3R_20870011_SNP [dm6]	A	G	3.438e^-4	0.698	INTERGENIC
X	11846729	X_11846729_SNP [dm3] X_11952696_SNP [dm6]	G	T	3.439e^-4	0.698	INTRON cac	TF binding site mE1_TFBS_HSA
X	6257155	X_6257155_SNP [dm3] X_6363122_SNP [dm6]	C	T	3.444e^-4	0.698	UPSTREAM swaPsi DOWNSTREAM swa EXON swaPsi	TF binding site mE1_TFBS_inv
2R	7121375	2R_7121375_SNP [dm3] 2R_11233870_SNP [dm6]	G	A	3.460e^-4	0.698	UPSTREAM CG13228 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	5739583	X_5739583_SNP [dm3] X_5845550_SNP [dm6]	C	T	3.463e^-4	0.698	SYNONYMOUS_CODING CG12729
3R	26089595	3R_26089595_SNP [dm3] 3R_30263873_SNP [dm6]	A	G	3.466e^-4	0.698	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	20571245	X_20571245_SNP [dm3] X_20700218_SNP [dm6]	A	C	3.466e^-4	0.698	INTERGENIC	regulatory region FlyBase REDfly_CRMs
2R	4688926	2R_4688926_SNP [dm3] 2R_8801421_SNP [dm6]	T	C	3.473e^-4	0.698	INTRON sns	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
3L	8018461	3L_8018461_SNP [dm3] 3L_8025361_SNP [dm6]	G	C	3.488e^-4	0.698	INTRON nmo
2R	12755496	2R_12755496_SNP [dm3] 2R_16867991_SNP [dm6]	G	C	3.495e^-4	0.698	UPSTREAM Ef1beta & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Ubx
3L	3571235	3L_3571235_SNP [dm3] 3L_3571235_SNP [dm6]	G	C	3.499e^-4	0.698	INTRON Eip63E	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
2L	12999472	2L_12999472_SNP [dm3] 2L_12999472_SNP [dm6]	A	G	3.501e^-4	0.698	INTRON CG12404	TF binding site mE1_TFBS_h mE1_TFBS_HSA
2L	20147612	2L_20147612_SNP [dm3] 2L_20147612_SNP [dm6]	T	C	3.503e^-4	0.698	INTERGENIC
3R	21277758	3R_21277758_SNP [dm3] 3R_25452036_SNP [dm6]	A	C	3.504e^-4	0.698	INTRON Fur1
3R	22294564	3R_22294564_SNP [dm3] 3R_26468842_SNP [dm6]	T	A	3.507e^-4	0.698	INTRON CG5455
3R	22294573	3R_22294573_SNP [dm3] 3R_26468851_SNP [dm6]	C	T	3.507e^-4	0.698	SPLICE_SITE_REGION CG5455 INTRON CG5455
3R	7709869	3R_7709869_SNP [dm3] 3R_11884147_SNP [dm6]	C	A	3.510e^-4	0.698	SYNONYMOUS_CODING mthl5 INTRON CG31368
2R	20438301	2R_20438301_SNP [dm3] 2R_24550778_SNP [dm6]	A	G	3.516e^-4	0.698	INTRON CG4622 & 1 other
3R	13789170	3R_13789170_SNP [dm3] 3R_17963448_SNP [dm6]	A	G	3.523e^-4	0.698	INTRON cpo
2L	1504489	2L_1504489_SNP [dm3] 2L_1504489_SNP [dm6]	G	A	3.523e^-4	0.698	DOWNSTREAM CR44064 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	12641484	3L_12641484_SNP [dm3] 3L_12648384_SNP [dm6]	T	G	3.525e^-4	0.698	DOWNSTREAM CR43431 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	8541979	2L_8541979_SNP [dm3] 2L_8541979_SNP [dm6]	A	T	3.527e^-4	0.698	UPSTREAM Sema-1a & 1 other DOWNSTREAM CG17834 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3L	22906263	3L_22906263_SNP [dm3] 3L_22913163_SNP [dm6]	A	G	3.528e^-4	0.698	INTRON CG12768	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	17407368	X_17407368_SNP [dm3] X_17513335_SNP [dm6]	T	C	3.529e^-4	0.698	INTRON CG43658
3L	18456577	3L_18456577_SNP [dm3] 3L_18463477_SNP [dm6]	A	T	3.538e^-4	0.698	UPSTREAM CG4306 INTERGENIC
X	12866290	X_12866290_SNP [dm3] X_12972257_SNP [dm6]	A	T	3.541e^-4	0.698	SYNONYMOUS_CODING CG15721 INTRON CR43636
X	16531580	X_16531580_SNP [dm3] X_16637547_SNP [dm6]	C	A	3.542e^-4	0.698	UPSTREAM RpS19a & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	8021571	3L_8021571_SNP [dm3] 3L_8028471_SNP [dm6]	A	G	3.546e^-4	0.698	DOWNSTREAM tRNA:CR32370 INTRON nmo	TF binding site mE1_TFBS_cad
3L	8021572	3L_8021572_SNP [dm3] 3L_8028472_SNP [dm6]	C	T	3.546e^-4	0.698	DOWNSTREAM tRNA:CR32370 INTRON nmo	TF binding site mE1_TFBS_cad
2R	7022295	2R_7022295_SNP [dm3] 2R_11134790_SNP [dm6]	C	A	3.550e^-4	0.698	INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_zfh1
3R	15476267	3R_15476267_SNP [dm3] 3R_19650545_SNP [dm6]	A	G	3.551e^-4	0.698	UTR_3_PRIME CG31220 UPSTREAM CG31219	TF binding site BDTNP1_TFBS_dl
2L	10639556	2L_10639556_DEL [dm3] 2L_10639556_DEL [dm6]	AA	A	3.554e^-4	0.698	UPSTREAM CG31872 EXON CR45351
X	19112787	X_19112787_SNP [dm3] X_19218754_SNP [dm6]	T	A	3.559e^-4	0.698	INTERGENIC
2L	5134794	2L_5134794_SNP [dm3] 2L_5134794_SNP [dm6]	A	G	3.565e^-4	0.698	SYNONYMOUS_CODING Msp300 INTRON Msp300
2R	18629354	2R_18629354_SNP [dm3] 2R_22741849_SNP [dm6]	C	T	3.589e^-4	0.698	UTR_3_PRIME CG42260
X	7487011	X_7487011_SNP [dm3] X_7592978_SNP [dm6]	G	A	3.594e^-4	0.698	INTERGENIC	regulatory region REDfly_CRMs
2R	16990854	2R_16990854_SNP [dm3] 2R_21103349_SNP [dm6]	G	C	3.601e^-4	0.698	INTRON ktub	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	12838936	3R_12838936_SNP [dm3] 3R_17013214_SNP [dm6]	A	T	3.602e^-4	0.698	DOWNSTREAM CG8907 INTERGENIC
3R	12839083	3R_12839083_SNP [dm3] 3R_17013361_SNP [dm6]	A	C	3.602e^-4	0.698	DOWNSTREAM CG8907 INTERGENIC
2L	9388713	2L_9388713_SNP [dm3] 2L_9388713_SNP [dm6]	G	A	3.603e^-4	0.698	INTRON Shawl & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4831425	2L_4831425_SNP [dm3] 2L_4831425_SNP [dm6]	A	G	3.608e^-4	0.698	SYNONYMOUS_CODING Ir25a UPSTREAM CG2976	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	7067690	2L_7067690_SNP [dm3] 2L_7067690_SNP [dm6]	T	G	3.617e^-4	0.698	UPSTREAM CG11289 INTERGENIC
2L	9805669	2L_9805669_SNP [dm3] 2L_9805669_SNP [dm6]	T	G	3.620e^-4	0.698	INTRON nAChRalpha6
3L	1353060	3L_1353060_SNP [dm3] 3L_1353060_SNP [dm6]	T	G	3.623e^-4	0.698	DOWNSTREAM 312 INTRON Ptp61F	TF binding site BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad
3R	10188343	3R_10188343_SNP [dm3] 3R_14362621_SNP [dm6]	T	C	3.623e^-4	0.698	UPSTREAM CG31320 INTRON NK7.1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	24659386	3R_24659386_SNP [dm3] 3R_28833664_SNP [dm6]	C	G	3.624e^-4	0.698	SYNONYMOUS_CODING Apc	TF binding site mE1_TFBS_chinmo
3R	24974112	3R_24974112_SNP [dm3] 3R_29148390_SNP [dm6]	G	A	3.627e^-4	0.698	UTR_5_PRIME Pglym78 UPSTREAM CG11882	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_GATAe mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3R	26935396	3R_26935396_SNP [dm3] 3R_31109674_SNP [dm6]	C	A	3.631e^-4	0.698	UPSTREAM CG11318 INTERGENIC
3R	9262710	3R_9262710_SNP [dm3] 3R_13436988_SNP [dm6]	A	C	3.632e^-4	0.698	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	24007696	3R_24007696_SNP [dm3] 3R_28181974_SNP [dm6]	C	G	3.634e^-4	0.698	INTRON CG34354
3L	13241870	3L_13241870_SNP [dm3] 3L_13248770_SNP [dm6]	G	A	3.637e^-4	0.698	UPSTREAM tRNA:D2:69F & 1 other INTRON caps
2R	10555266	2R_10555266_SNP [dm3] 2R_14667761_SNP [dm6]	A	C	3.638e^-4	0.698	UPSTREAM CG12860 & 1 other INTERGENIC
2R	10460322	2R_10460322_SNP [dm3] 2R_14572817_SNP [dm6]	C	A	3.644e^-4	0.698	SYNONYMOUS_CODING LamC INTRON ttv
3L	8054793	3L_8054793_SNP [dm3] 3L_8061693_SNP [dm6]	C	T	3.646e^-4	0.698	UPSTREAM tRNA:CR32360 INTERGENIC
3L	12758223	3L_12758223_SNP [dm3] 3L_12765123_SNP [dm6]	C	T	3.647e^-4	0.698	INTRON CG32113	TF binding site mE1_TFBS_cad
2R	16852653	2R_16852653_SNP [dm3] 2R_20965148_SNP [dm6]	T	A	3.654e^-4	0.698	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10117892	3R_10117892_SNP [dm3] 3R_14292170_SNP [dm6]	C	G	3.656e^-4	0.698	INTRON CG12207
2R	14972415	2R_14972415_SNP [dm3] 2R_19084910_SNP [dm6]	T	A	3.657e^-4	0.698	INTRON 5-HT1A	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	16413578	3R_16413578_SNP [dm3] 3R_20587856_SNP [dm6]	T	G	3.659e^-4	0.698	UPSTREAM Srp72 INTRON Sep2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	6320647	2L_6320647_SNP [dm3] 2L_6320647_SNP [dm6]	C	G	3.663e^-4	0.698	INTRON Ddr
2R	10066344	2R_10066344_SNP [dm3] 2R_14178839_SNP [dm6]	C	G	3.666e^-4	0.698	INTRON cg	TF binding site mE1_TFBS_HSA
2R	10822922	2R_10822922_SNP [dm3] 2R_14935417_SNP [dm6]	G	T	3.666e^-4	0.698	UPSTREAM Lap1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
3R	9896739	3R_9896739_SNP [dm3] 3R_14071017_SNP [dm6]	T	C	3.667e^-4	0.698	INTRON foxo
X	3470486	X_3470486_SNP [dm3] X_3576453_SNP [dm6]	T	A	3.669e^-4	0.698	INTRON AstA-R1
2R	11243544	2R_11243544_SNP [dm3] 2R_15356039_SNP [dm6]	A	C	3.677e^-4	0.698	INTRON unc-5	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt mE1_TFBS_cad mE1_TFBS_sens
2L	3721187	2L_3721187_SNP [dm3] 2L_3721187_SNP [dm6]	A	G	3.684e^-4	0.698	UPSTREAM Shaw INTRON Shaw
3L	12760159	3L_12760159_SNP [dm3] 3L_12767059_SNP [dm6]	C	T	3.705e^-4	0.698	SYNONYMOUS_CODING CG32113	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	15567634	X_15567634_DEL [dm3] X_15673601_DEL [dm6]	CCC	C	3.709e^-4	0.698	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	15053386	2L_15053386_SNP [dm3] 2L_15053386_SNP [dm6]	G	A	3.710e^-4	0.698	INTRON ck	regulatory region REDfly_CRMs
2L	6348901	2L_6348901_SNP [dm3] 2L_6348901_SNP [dm6]	C	G	3.710e^-4	0.698	UPSTREAM CG9497 DOWNSTREAM CG9498 INTERGENIC
2R	16718819	2R_16718819_SNP [dm3] 2R_20831314_SNP [dm6]	G	C	3.711e^-4	0.698	INTRON insc & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sbb mE1_TFBS_Trl mE1_TFBS_ttk
2R	892937	2R_892937_SNP [dm3] 2R_5005432_SNP [dm6]	A	T	3.717e^-4	0.698	INTRON Ir41a	transposable element FlyBase
2R	10822883	2R_10822883_INS [dm3] 2R_14935378_INS [dm6]	G	GT	3.719e^-4	0.698	UPSTREAM Lap1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
2L	6058440	2L_6058440_SNP [dm3] 2L_6058440_SNP [dm6]	G	A	3.720e^-4	0.698	SYNONYMOUS_CODING CG13995	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	15440598	3L_15440598_SNP [dm3] 3L_15447498_SNP [dm6]	G	A	3.723e^-4	0.698	INTERGENIC
3L	18442903	3L_18442903_SNP [dm3] 3L_18449803_SNP [dm6]	G	A	3.723e^-4	0.698	INTERGENIC
2R	18371699	2R_18371699_SNP [dm3] 2R_22484194_SNP [dm6]	T	A	3.726e^-4	0.698	SYNONYMOUS_CODING CG4554	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	11107629	3L_11107629_SNP [dm3] 3L_11114529_SNP [dm6]	T	G	3.730e^-4	0.698	UTR_3_PRIME fd68A UPSTREAM Sod

By genomic position
Variant impact
Gene name

1μg/mL survivorship phenotype phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results