©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2L | 6950390 | 2L_6950390_SNP [dm3] 2L_6950390_SNP [dm6] | G | T | 1.841e-236 | 3.087e-231 |
UPSTREAM
SA & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
|
|
2R | 12494447 | 2R_12494447_SNP [dm3] 2R_16606942_SNP [dm6] | G | A | 1.841e-236 | 3.087e-231 |
UPSTREAM
CG5065 INTERGENIC |
TF binding site
mE1_TFBS_cnc
|
|
2R | 12735477 | 2R_12735477_SNP [dm3] 2R_16847972_SNP [dm6] | T | A | 1.841e-236 | 3.087e-231 |
INTERGENIC
|
||
2R | 13717819 | 2R_13717819_SNP [dm3] 2R_17830314_SNP [dm6] | T | A | 1.841e-236 | 3.087e-231 |
INTRON
grh |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_bcd mE1_TFBS_HSA |
|
2R | 13832495 | 2R_13832495_SNP [dm3] 2R_17944990_SNP [dm6] | A | T | 1.841e-236 | 3.087e-231 |
INTERGENIC
|
||
2R | 14834678 | 2R_14834678_SNP [dm3] 2R_18947173_SNP [dm6] | T | C | 1.841e-236 | 3.087e-231 |
UPSTREAM
sano INTRON sano |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
|
|
2R | 14935448 | 2R_14935448_SNP [dm3] 2R_19047943_SNP [dm6] | G | T | 1.841e-236 | 3.087e-231 |
INTERGENIC
|
||
2R | 14937752 | 2R_14937752_SNP [dm3] 2R_19050247_SNP [dm6] | T | C | 1.841e-236 | 3.087e-231 |
INTERGENIC
|
||
2R | 15903946 | 2R_15903946_SNP [dm3] 2R_20016441_SNP [dm6] | G | A | 1.841e-236 | 3.087e-231 |
DOWNSTREAM
CR44630 INTERGENIC |
||
2R | 16001369 | 2R_16001369_SNP [dm3] 2R_20113864_SNP [dm6] | A | G | 1.841e-236 | 3.087e-231 |
SYNONYMOUS_CODING
18w |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_sens
|
|
2R | 17551819 | 2R_17551819_SNP [dm3] 2R_21664314_SNP [dm6] | T | C | 1.841e-236 | 3.087e-231 |
UTR_5_PRIME
CG42362 & 1 other UPSTREAM CG42362 & 1 other DOWNSTREAM CR44748 |
TF binding site
mE1_TFBS_inv
|
|
3L | 505318 | 3L_505318_SNP [dm3] 3L_505318_SNP [dm6] | G | A | 8.965e-230 | 1.103e-224 |
INTRON
klar |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_zfh1
|
|
3R | 24824677 | 3R_24824677_SNP [dm3] 3R_28998955_SNP [dm6] | C | A | 8.965e-230 | 1.103e-224 |
INTRON
wat |
||
3R | 24824726 | 3R_24824726_SNP [dm3] 3R_28999004_SNP [dm6] | C | G | 8.965e-230 | 1.103e-224 |
INTRON
wat |
||
3R | 7555231 | 3R_7555231_SNP [dm3] 3R_11729509_SNP [dm6] | C | G | 8.965e-230 | 1.103e-224 |
SYNONYMOUS_CODING
CG12594 |
TF binding site
mE1_TFBS_cad
|
|
2L | 12929080 | 2L_12929080_SNP [dm3] 2L_12929080_SNP [dm6] | C | T | 6.347e-228 | 3.573e-223 |
SYNONYMOUS_CODING
ACXE |
||
2L | 10083219 | 2L_10083219_SNP [dm3] 2L_10083219_SNP [dm6] | A | T | 1.395e-227 | 3.573e-223 |
INTRON
CG44153 |
||
2L | 10083220 | 2L_10083220_SNP [dm3] 2L_10083220_SNP [dm6] | C | A | 1.395e-227 | 3.573e-223 |
INTRON
CG44153 |
||
2L | 11911448 | 2L_11911448_DEL [dm3] 2L_11911448_DEL [dm6] | ATA | A | 1.395e-227 | 3.573e-223 |
INTRON
Pde1c |
||
2L | 11911461 | 2L_11911461_SNP [dm3] 2L_11911461_SNP [dm6] | A | T | 1.395e-227 | 3.573e-223 |
INTRON
Pde1c |
||
2L | 12397755 | 2L_12397755_SNP [dm3] 2L_12397755_SNP [dm6] | G | C | 1.395e-227 | 3.573e-223 |
UPSTREAM
Pkd2 DOWNSTREAM bru-2 INTERGENIC |
||
2L | 12947093 | 2L_12947093_SNP [dm3] 2L_12947093_SNP [dm6] | G | A | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 13134372 | 2L_13134372_SNP [dm3] 2L_13134372_SNP [dm6] | G | C | 1.395e-227 | 3.573e-223 |
SYNONYMOUS_CODING
CG5122 |
||
2L | 17287740 | 2L_17287740_SNP [dm3] 2L_17287740_SNP [dm6] | T | C | 1.395e-227 | 3.573e-223 |
DOWNSTREAM
CG15140 INTERGENIC |
||
2L | 17289734 | 2L_17289734_SNP [dm3] 2L_17289734_SNP [dm6] | G | C | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 17298448 | 2L_17298448_SNP [dm3] 2L_17298448_SNP [dm6] | A | C | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 17300392 | 2L_17300392_SNP [dm3] 2L_17300392_SNP [dm6] | A | G | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 17300403 | 2L_17300403_SNP [dm3] 2L_17300403_SNP [dm6] | A | T | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 17302534 | 2L_17302534_SNP [dm3] 2L_17302534_SNP [dm6] | A | G | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
2L | 17302565 | 2L_17302565_SNP [dm3] 2L_17302565_SNP [dm6] | C | A | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
2L | 17302602 | 2L_17302602_SNP [dm3] 2L_17302602_SNP [dm6] | T | A | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
2L | 17302629 | 2L_17302629_SNP [dm3] 2L_17302629_SNP [dm6] | G | A | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
2L | 17302634 | 2L_17302634_SNP [dm3] 2L_17302634_SNP [dm6] | A | G | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
2L | 17303312 | 2L_17303312_SNP [dm3] 2L_17303312_SNP [dm6] | A | T | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 17307667 | 2L_17307667_SNP [dm3] 2L_17307667_SNP [dm6] | T | C | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 17308165 | 2L_17308165_SNP [dm3] 2L_17308165_SNP [dm6] | A | G | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2L | 17320165 | 2L_17320165_SNP [dm3] 2L_17320165_SNP [dm6] | C | T | 1.395e-227 | 3.573e-223 |
UPSTREAM
CR45696 DOWNSTREAM CG45691 INTERGENIC |
||
2L | 17328205 | 2L_17328205_SNP [dm3] 2L_17328205_SNP [dm6] | T | C | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
2L | 17328400 | 2L_17328400_SNP [dm3] 2L_17328400_SNP [dm6] | G | A | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 17328407 | 2L_17328407_SNP [dm3] 2L_17328407_SNP [dm6] | T | A | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 21009474 | 2L_21009474_SNP [dm3] 2L_21009474_SNP [dm6] | C | A | 1.395e-227 | 3.573e-223 |
INTRON
CG42238 |
TF binding site
BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA
|
|
2L | 21118215 | 2L_21118215_SNP [dm3] 2L_21118215_SNP [dm6] | C | G | 1.395e-227 | 3.573e-223 |
INTRON
Nhe2 |
||
2L | 7603569 | 2L_7603569_SNP [dm3] 2L_7603569_SNP [dm6] | C | A | 1.395e-227 | 3.573e-223 |
UPSTREAM
CR45370 INTERGENIC |
||
2L | 9287980 | 2L_9287980_SNP [dm3] 2L_9287980_SNP [dm6] | G | A | 1.395e-227 | 3.573e-223 |
INTRON
Ggamma30A |
||
2L | 9288437 | 2L_9288437_SNP [dm3] 2L_9288437_SNP [dm6] | A | T | 1.395e-227 | 3.573e-223 |
INTRON
Ggamma30A |
||
2R | 10913638 | 2R_10913638_SNP [dm3] 2R_15026133_SNP [dm6] | T | A | 1.395e-227 | 3.573e-223 |
DOWNSTREAM
CR45256 INTRON hbs |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2R | 12400062 | 2R_12400062_SNP [dm3] 2R_16512557_SNP [dm6] | T | G | 1.395e-227 | 3.573e-223 |
INTRON
Sema-2a |
||
2R | 12524025 | 2R_12524025_SNP [dm3] 2R_16636520_SNP [dm6] | G | A | 1.395e-227 | 3.573e-223 |
INTRON
Alk |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
2R | 13833218 | 2R_13833218_SNP [dm3] 2R_17945713_SNP [dm6] | C | G | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
2R | 16908009 | 2R_16908009_DEL [dm3] 2R_21020504_DEL [dm6] | AAA | A | 1.395e-227 | 3.573e-223 |
INTRON
RIC-3 |
||
2R | 16908016 | 2R_16908016_SNP [dm3] 2R_21020511_SNP [dm6] | T | C | 1.395e-227 | 3.573e-223 |
INTRON
RIC-3 |
||
2R | 18895823 | 2R_18895823_INS [dm3] 2R_23008300_INS [dm6] | A | ACATACATA | 1.395e-227 | 3.573e-223 |
INTRON
twi |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 3654852 | 2R_3654852_SNP [dm3] 2R_7767347_SNP [dm6] | A | T | 1.395e-227 | 3.573e-223 |
INTRON
CG30497 & 1 other |
||
2R | 3658371 | 2R_3658371_SNP [dm3] 2R_7770866_SNP [dm6] | T | C | 1.395e-227 | 3.573e-223 |
INTRON
CG30497 & 1 other |
||
2R | 7296150 | 2R_7296150_SNP [dm3] 2R_11408645_SNP [dm6] | C | A | 1.395e-227 | 3.573e-223 |
UTR_3_PRIME
CG30026 DOWNSTREAM CG7759 |
TF binding site
mE1_TFBS_bab1
|
|
2R | 7296155 | 2R_7296155_SNP [dm3] 2R_11408650_SNP [dm6] | C | T | 1.395e-227 | 3.573e-223 |
UTR_3_PRIME
CG30026 DOWNSTREAM CG7759 |
TF binding site
mE1_TFBS_bab1
|
|
3L | 7021362 | 3L_7021362_SNP [dm3] 3L_7028262_SNP [dm6] | G | T | 1.395e-227 | 3.573e-223 |
INTRON
Mp |
||
3L | 7021363 | 3L_7021363_SNP [dm3] 3L_7028263_SNP [dm6] | T | A | 1.395e-227 | 3.573e-223 |
INTRON
Mp |
||
3L | 7021364 | 3L_7021364_INS [dm3] 3L_7028264_INS [dm6] | T | TAG | 1.395e-227 | 3.573e-223 |
INTRON
Mp |
||
3L | 9233509 | 3L_9233509_SNP [dm3] 3L_9240409_SNP [dm6] | G | A | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
3R | 16721079 | 3R_16721079_INS [dm3] 3R_20895357_INS [dm6] | T | TGGTAAAAGATGATCGCATT... | 1.395e-227 | 3.573e-223 |
UTR_3_PRIME
CG10830 |
||
3R | 16721106 | 3R_16721106_INS [dm3] 3R_20895384_INS [dm6] | A | ACG | 1.395e-227 | 3.573e-223 |
UTR_3_PRIME
CG10830 |
||
3R | 16721133 | 3R_16721133_SNP [dm3] 3R_20895411_SNP [dm6] | A | C | 1.395e-227 | 3.573e-223 |
UTR_3_PRIME
CG10830 |
||
3R | 19468196 | 3R_19468196_SNP [dm3] 3R_23642474_SNP [dm6] | C | A | 1.395e-227 | 3.573e-223 |
INTRON
CG31145 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3R | 21617514 | 3R_21617514_SNP [dm3] 3R_25791792_SNP [dm6] | C | A | 1.395e-227 | 3.573e-223 |
DOWNSTREAM
CR43632 EXON CR43631 |
||
3R | 23729652 | 3R_23729652_SNP [dm3] 3R_27903930_SNP [dm6] | C | T | 1.395e-227 | 3.573e-223 |
INTRON
CG34353 |
||
3R | 23747395 | 3R_23747395_SNP [dm3] 3R_27921673_SNP [dm6] | A | G | 1.395e-227 | 3.573e-223 |
SYNONYMOUS_CODING
BCAS2 UPSTREAM CG12259 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 23751698 | 3R_23751698_SNP [dm3] 3R_27925976_SNP [dm6] | T | C | 1.395e-227 | 3.573e-223 |
SYNONYMOUS_CODING
mino UPSTREAM CR45566 |
TF binding site
BDTNP1_TFBS_dl
|
|
3R | 23760763 | 3R_23760763_SNP [dm3] 3R_27935041_SNP [dm6] | C | T | 1.395e-227 | 3.573e-223 |
NON_SYNONYMOUS_CODING
Mes-4 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
|
|
3R | 23969600 | 3R_23969600_SNP [dm3] 3R_28143878_SNP [dm6] | C | G | 1.395e-227 | 3.573e-223 |
INTERGENIC
|
||
X | 2886317 | X_2886317_SNP [dm3] X_2992284_SNP [dm6] | T | C | 1.395e-227 | 3.573e-223 |
INTRON
kirre |
||
X | 3156052 | X_3156052_SNP [dm3] X_3262019_SNP [dm6] | C | T | 1.395e-227 | 3.573e-223 |
INTRON
dnc |
||
2L | 3105754 | 2L_3105754_SNP [dm3] 2L_3105754_SNP [dm6] | G | A | 5.186e-221 | 1.141e-216 |
INTRON
toc |
||
2L | 17279672 | 2L_17279672_SNP [dm3] 2L_17279672_SNP [dm6] | C | T | 5.258e-221 | 1.141e-216 |
UPSTREAM
CR45729 INTERGENIC |
||
2L | 17282955 | 2L_17282955_SNP [dm3] 2L_17282955_SNP [dm6] | C | A | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17282974 | 2L_17282974_SNP [dm3] 2L_17282974_SNP [dm6] | T | G | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17282977 | 2L_17282977_SNP [dm3] 2L_17282977_SNP [dm6] | A | T | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17283214 | 2L_17283214_SNP [dm3] 2L_17283214_SNP [dm6] | G | A | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17289286 | 2L_17289286_DEL [dm3] 2L_17289286_DEL [dm6] | TCAAAAATGATTCTTTACGT... | T | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17324045 | 2L_17324045_SNP [dm3] 2L_17324045_SNP [dm6] | T | C | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17330912 | 2L_17330912_SNP [dm3] 2L_17330912_SNP [dm6] | A | T | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17333597 | 2L_17333597_SNP [dm3] 2L_17333597_SNP [dm6] | A | G | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 17333598 | 2L_17333598_SNP [dm3] 2L_17333598_SNP [dm6] | G | A | 5.258e-221 | 1.141e-216 |
INTERGENIC
|
||
2L | 3628632 | 2L_3628632_SNP [dm3] 2L_3628632_SNP [dm6] | C | G | 5.258e-221 | 1.141e-216 |
INTRON
for |
TF binding site
BDTNP1_TFBS_twi
|
|
2L | 8223242 | 2L_8223242_SNP [dm3] 2L_8223242_SNP [dm6] | T | C | 5.258e-221 | 1.141e-216 |
SYNONYMOUS_CODING
Pvr |
||
3R | 23969599 | 3R_23969599_SNP [dm3] 3R_28143877_SNP [dm6] | G | T | 5.596e-221 | 1.200e-216 |
INTERGENIC
|
||
2L | 13396994 | 2L_13396994_SNP [dm3] 2L_13396994_SNP [dm6] | C | T | 4.135e-220 | 6.610e-216 |
SYNONYMOUS_CODING
CG10859 UPSTREAM CG16957 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2L | 10115124 | 2L_10115124_SNP [dm3] 2L_10115124_SNP [dm6] | T | G | 4.852e-220 | 6.610e-216 |
INTRON
CG44153 & 1 other |
||
2L | 16230623 | 2L_16230623_SNP [dm3] 2L_16230623_SNP [dm6] | T | A | 4.855e-220 | 6.610e-216 |
UPSTREAM
CG42817 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_slp1
|
|
2L | 17301019 | 2L_17301019_SNP [dm3] 2L_17301019_SNP [dm6] | T | C | 4.855e-220 | 6.610e-216 |
INTERGENIC
|
||
2L | 721488 | 2L_721488_SNP [dm3] 2L_721488_SNP [dm6] | A | T | 4.855e-220 | 6.610e-216 |
INTERGENIC
|
||
2L | 8132028 | 2L_8132028_SNP [dm3] 2L_8132028_SNP [dm6] | A | G | 4.855e-220 | 6.610e-216 |
SYNONYMOUS_CODING
CG8668 |
TF binding site
BDTNP1_TFBS_da
|
|
2L | 8137778 | 2L_8137778_SNP [dm3] 2L_8137778_SNP [dm6] | T | A | 4.855e-220 | 6.610e-216 |
NON_SYNONYMOUS_CODING
CG8552 UTR_5_PRIME CG8552 |
TF binding site
mE1_TFBS_cad
|
|
2L | 8139036 | 2L_8139036_SNP [dm3] 2L_8139036_SNP [dm6] | C | T | 4.855e-220 | 6.610e-216 |
NON_SYNONYMOUS_CODING
CG8552 UTR_5_PRIME CG8552 |
TF binding site
mE1_TFBS_cad
|
|
2L | 8139317 | 2L_8139317_SNP [dm3] 2L_8139317_SNP [dm6] | C | A | 4.855e-220 | 6.610e-216 |
NON_SYNONYMOUS_CODING
CG8552 UTR_5_PRIME CG8552 |
TF binding site
mE1_TFBS_cad
|
|
2L | 8140678 | 2L_8140678_SNP [dm3] 2L_8140678_SNP [dm6] | G | A | 4.855e-220 | 6.610e-216 |
SYNONYMOUS_CODING
CG8552 UTR_5_PRIME CG8552 DOWNSTREAM mir-4984 |
TF binding site
mE1_TFBS_cad
|
|
2R | 20392306 | 2R_20392306_SNP [dm3] 2R_24504783_SNP [dm6] | G | A | 4.855e-220 | 6.610e-216 |
INTERGENIC
|
||
2R | 20392829 | 2R_20392829_SNP [dm3] 2R_24505306_SNP [dm6] | C | T | 4.855e-220 | 6.610e-216 |
INTERGENIC
|
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3L | 7724785 | 3L_7724785_SNP [dm3] 3L_7731685_SNP [dm6] | G | A | 4.855e-220 | 6.610e-216 |
SYNONYMOUS_CODING
CG8492 INTRON CG32373 |
TF binding site
mE1_TFBS_chinmo
|
|
3L | 9230823 | 3L_9230823_SNP [dm3] 3L_9237723_SNP [dm6] | G | T | 4.855e-220 | 6.610e-216 |
INTERGENIC
|