DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=9.124e^-1)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_2L_t	0.06117
In_3R_K	0.07148

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
wolba	3.6782	0.0551
In_2L_t	8.6549	0.0132

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

1832 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

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Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	16904703	3R_16904703_SNP [dm3] 3R_21078981_SNP [dm6]	G	T	7.137e^-7	0.804	INTRON HHEX
3L	18111122	3L_18111122_SNP [dm3] 3L_18118022_SNP [dm6]	C	A	1.557e^-6	0.804	UTR_3_PRIME CG32195 INTRON CG7341
3R	25504118	3R_25504118_SNP [dm3] 3R_29678396_SNP [dm6]	A	C	1.669e^-6	0.804	SYNONYMOUS_CODING Cap-D2	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	4370437	3R_4370437_SNP [dm3] 3R_8544715_SNP [dm6]	T	C	2.050e^-6	0.804	UPSTREAM CR45575 INTERGENIC
X	9689792	X_9689792_SNP [dm3] X_9795759_SNP [dm6]	A	G	2.166e^-6	0.804	INTRON CG32698
3R	4370439	3R_4370439_SNP [dm3] 3R_8544717_SNP [dm6]	T	G	2.731e^-6	0.804	UPSTREAM CR45575 INTERGENIC
X	9689793	X_9689793_SNP [dm3] X_9795760_SNP [dm6]	G	A	3.705e^-6	0.804	INTRON CG32698
2L	3919325	2L_3919325_SNP [dm3] 2L_3919325_SNP [dm6]	A	T	3.814e^-6	0.804	SYNONYMOUS_CODING fred
3R	25445396	3R_25445396_SNP [dm3] 3R_29619674_SNP [dm6]	C	T	4.045e^-6	0.804	INTRON CG1907	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	8571273	X_8571273_SNP [dm3] X_8677240_SNP [dm6]	T	C	4.520e^-6	0.804	NON_SYNONYMOUS_CODING CG12772	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens
3R	25503463	3R_25503463_SNP [dm3] 3R_29677741_SNP [dm6]	A	T	5.325e^-6	0.804	INTRON Cap-D2	TF binding site mE1_TFBS_cad
3R	25504580	3R_25504580_SNP [dm3] 3R_29678858_SNP [dm6]	T	C	5.470e^-6	0.804	SYNONYMOUS_CODING Cap-D2	TF binding site mE1_TFBS_cad
2R	12861676	2R_12861676_SNP [dm3] 2R_16974171_SNP [dm6]	A	G	5.603e^-6	0.804	INTRON Cbp53E
X	8571326	X_8571326_SNP [dm3] X_8677293_SNP [dm6]	A	C	6.181e^-6	0.804	NON_SYNONYMOUS_CODING CG12772	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens
2L	9584906	2L_9584906_SNP [dm3] 2L_9584906_SNP [dm6]	T	G	6.434e^-6	0.804	EXON CR43621	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
X	9689759	X_9689759_SNP [dm3] X_9795726_SNP [dm6]	T	A	7.107e^-6	0.829	INTRON CG32698
X	2798928	X_2798928_SNP [dm3] X_2904895_SNP [dm6]	C	A	7.772e^-6	0.829	INTRON kirre
3R	25445395	3R_25445395_SNP [dm3] 3R_29619673_SNP [dm6]	C	T	8.362e^-6	0.829	INTRON CG1907	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	8086584	X_8086584_SNP [dm3] X_8192551_SNP [dm6]	C	G	8.848e^-6	0.829	UPSTREAM sdt INTRON sdt	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	6387908	3L_6387908_SNP [dm3] 3L_6394808_SNP [dm6]	A	T	9.818e^-6	0.829	INTERGENIC
X	9689938	X_9689938_SNP [dm3] X_9795905_SNP [dm6]	C	A	1.066e^-5	0.829	INTRON CG32698
3L	19067658	3L_19067658_SNP [dm3] 3L_19074558_SNP [dm6]	A	T	1.135e^-5	0.829	INTRON Mkp3
3L	9203516	3L_9203516_SNP [dm3] 3L_9210416_SNP [dm6]	G	A	1.143e^-5	0.829	INTERGENIC
3L	19072143	3L_19072143_SNP [dm3] 3L_19079043_SNP [dm6]	C	A	1.146e^-5	0.829	INTRON Mkp3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	25445399	3R_25445399_SNP [dm3] 3R_29619677_SNP [dm6]	G	T	1.390e^-5	0.829	INTRON CG1907	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
4	498765	4_498765_SNP [dm3] 4_478139_SNP [dm6]	T	G	1.458e^-5	0.829	INTRON Asator
3R	16867461	3R_16867461_SNP [dm3] 3R_21041739_SNP [dm6]	A	G	1.487e^-5	0.829	SYNONYMOUS_CODING Dhc93AB	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	11584980	3L_11584980_SNP [dm3] 3L_11591880_SNP [dm6]	G	A	1.549e^-5	0.829	UPSTREAM CG33268 DOWNSTREAM CR45672 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	16869153	3R_16869153_SNP [dm3] 3R_21043431_SNP [dm6]	C	A	1.578e^-5	0.829	UPSTREAM Dhc93AB & 1 other INTERGENIC
3L	7015805	3L_7015805_INS [dm3] 3L_7022705_INS [dm6]	T	TGT	1.588e^-5	0.829	INTRON Mp
2R	9089396	2R_9089396_SNP [dm3] 2R_13201891_SNP [dm6]	A	G	1.604e^-5	0.829	SYNONYMOUS_CODING Aats-val DOWNSTREAM lat & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	9130441	3L_9130441_SNP [dm3] 3L_9137341_SNP [dm6]	T	C	1.636e^-5	0.829	UPSTREAM nwk & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3R	16905820	3R_16905820_SNP [dm3] 3R_21080098_SNP [dm6]	C	A	1.801e^-5	0.829	INTRON HHEX
3L	20965644	3L_20965644_SNP [dm3] 3L_20972544_SNP [dm6]	A	G	1.802e^-5	0.829	SYNONYMOUS_CODING CG33286
3L	2603556	3L_2603556_SNP [dm3] 3L_2603556_SNP [dm6]	G	A	1.839e^-5	0.829	SYNONYMOUS_CODING Pxn	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	13982361	3L_13982361_SNP [dm3] 3L_13989261_SNP [dm6]	G	A	1.878e^-5	0.829	DOWNSTREAM CG9040 INTRON CG17364
3L	2604195	3L_2604195_SNP [dm3] 3L_2604195_SNP [dm6]	G	A	1.944e^-5	0.829	SYNONYMOUS_CODING Pxn	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	4749454	2L_4749454_SNP [dm3] 2L_4749454_SNP [dm6]	A	G	1.946e^-5	0.829	INTRON CG15630
3L	19070870	3L_19070870_SNP [dm3] 3L_19077770_SNP [dm6]	G	A	1.960e^-5	0.829	INTRON Mkp3
2L	1138074	2L_1138074_SNP [dm3] 2L_1138074_SNP [dm6]	C	T	1.983e^-5	0.829	INTRON CG4577
3L	953049	3L_953049_SNP [dm3] 3L_953049_SNP [dm6]	C	T	2.195e^-5	0.829	INTRON Glut1
3L	953194	3L_953194_SNP [dm3] 3L_953194_SNP [dm6]	C	T	2.195e^-5	0.829	INTRON Glut1
3L	953891	3L_953891_SNP [dm3] 3L_953891_SNP [dm6]	G	T	2.195e^-5	0.829	INTRON Glut1
2L	3922172	2L_3922172_SNP [dm3] 2L_3922172_SNP [dm6]	G	A	2.206e^-5	0.829	INTRON fred
2L	3396644	2L_3396644_SNP [dm3] 2L_3396644_SNP [dm6]	A	G	2.221e^-5	0.829	DOWNSTREAM CR44792 INTERGENIC
X	8571630	X_8571630_SNP [dm3] X_8677597_SNP [dm6]	T	A	2.261e^-5	0.829	INTRON CG12772	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
X	8315103	X_8315103_SNP [dm3] X_8421070_SNP [dm6]	T	C	2.315e^-5	0.829	UPSTREAM Trf2 INTRON Trf2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	9089438	2R_9089438_SNP [dm3] 2R_13201933_SNP [dm6]	A	G	2.369e^-5	0.829	SYNONYMOUS_CODING Aats-val DOWNSTREAM lat & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	16866242	3R_16866242_SNP [dm3] 3R_21040520_SNP [dm6]	A	G	2.425e^-5	0.829	SYNONYMOUS_CODING Dhc93AB	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	20172018	3L_20172018_SNP [dm3] 3L_20178918_SNP [dm6]	C	T	2.460e^-5	0.829	INTRON CG42674	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	6618907	X_6618907_SNP [dm3] X_6724874_SNP [dm6]	C	G	2.467e^-5	0.829	INTRON CG3168	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz
3L	4186998	3L_4186998_SNP [dm3] 3L_4186998_SNP [dm6]	A	T	2.515e^-5	0.829	UPSTREAM VhaM9.7-c INTRON CG18675 & 1 other	TF binding site BDTNP1_TFBS_dl
2L	15404088	2L_15404088_SNP [dm3] 2L_15404088_SNP [dm6]	T	A	2.528e^-5	0.829	INTERGENIC	TF binding site mE1_TFBS_cad
3R	16869106	3R_16869106_SNP [dm3] 3R_21043384_SNP [dm6]	G	A	2.552e^-5	0.829	UPSTREAM Dhc93AB & 1 other INTERGENIC
2L	1184146	2L_1184146_SNP [dm3] 2L_1184146_SNP [dm6]	T	A	2.581e^-5	0.829	UTR_5_PRIME Tgt UPSTREAM CG5126	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3R	16991883	3R_16991883_SNP [dm3] 3R_21166161_SNP [dm6]	T	C	2.615e^-5	0.829	SYNONYMOUS_CODING Snmp1 DOWNSTREAM CG5810 INTRON SNF4Agamma
2L	3920738	2L_3920738_SNP [dm3] 2L_3920738_SNP [dm6]	T	G	2.651e^-5	0.829	INTRON fred
X	13795161	X_13795161_SNP [dm3] X_13901128_SNP [dm6]	A	C	2.708e^-5	0.829	INTRON mamo
3R	16864900	3R_16864900_DEL [dm3] 3R_21039178_DEL [dm6]	TGCGA	AT	2.880e^-5	0.829	INTRON Dhc93AB
3R	16870033	3R_16870033_SNP [dm3] 3R_21044311_SNP [dm6]	T	G	2.887e^-5	0.829	NON_SYNONYMOUS_CODING CG12278 DOWNSTREAM CG31189
2R	16767008	2R_16767008_SNP [dm3] 2R_20879503_SNP [dm6]	A	G	2.927e^-5	0.829	UPSTREAM Cib2 DOWNSTREAM Ipk1 INTERGENIC
3L	19072289	3L_19072289_SNP [dm3] 3L_19079189_SNP [dm6]	C	T	2.987e^-5	0.829	INTRON Mkp3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	6619085	X_6619085_SNP [dm3] X_6725052_SNP [dm6]	G	A	2.996e^-5	0.829	INTRON CG3168	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz mE1_TFBS_HSA
2L	7207001	2L_7207001_SNP [dm3] 2L_7207001_SNP [dm6]	T	G	3.035e^-5	0.829	SYNONYMOUS_CODING CG13784 UTR_3_PRIME CG13784	TF binding site mE1_TFBS_sens
3R	25445452	3R_25445452_SNP [dm3] 3R_29619730_SNP [dm6]	C	T	3.066e^-5	0.829	SYNONYMOUS_CODING CG1907	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	10801416	2L_10801416_SNP [dm3] 2L_10801416_SNP [dm6]	C	A	3.112e^-5	0.829	UPSTREAM CG31869 DOWNSTREAM CR44581 INTERGENIC
3L	10624348	3L_10624348_SNP [dm3] 3L_10631248_SNP [dm6]	G	T	3.176e^-5	0.829	UPSTREAM hay & 1 other INTRON hay & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3R	11501282	3R_11501282_SNP [dm3] 3R_15675560_SNP [dm6]	T	C	3.184e^-5	0.829	INTRON pxb
3R	16867500	3R_16867500_SNP [dm3] 3R_21041778_SNP [dm6]	T	C	3.254e^-5	0.829	SYNONYMOUS_CODING Dhc93AB	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	6618908	X_6618908_SNP [dm3] X_6724875_SNP [dm6]	C	T	3.399e^-5	0.829	INTRON CG3168	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz
4	255510	4_255510_SNP [dm3] 4_234884_SNP [dm6]	C	T	3.420e^-5	0.829	SYNONYMOUS_CODING CG1674 INTRON CG1674
2R	12861679	2R_12861679_SNP [dm3] 2R_16974174_SNP [dm6]	C	T	3.423e^-5	0.829	INTRON Cbp53E
X	8315109	X_8315109_SNP [dm3] X_8421076_SNP [dm6]	G	C	3.444e^-5	0.829	UPSTREAM Trf2 INTRON Trf2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	5481087	3R_5481087_SNP [dm3] 3R_9655365_SNP [dm6]	A	C	3.487e^-5	0.829	INTRON CG9492	TF binding site mE1_TFBS_chinmo
2L	3051197	2L_3051197_SNP [dm3] 2L_3051197_SNP [dm6]	C	T	3.492e^-5	0.829	SYNONYMOUS_CODING v_2_k05816	TF binding site mE1_TFBS_chinmo
3L	19072288	3L_19072288_SNP [dm3] 3L_19079188_SNP [dm6]	C	T	3.506e^-5	0.829	INTRON Mkp3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	19081941	3R_19081941_SNP [dm3] 3R_23256219_SNP [dm6]	A	G	3.640e^-5	0.829	SYNONYMOUS_CODING wda	TF binding site mE1_TFBS_cad
3L	7015803	3L_7015803_SNP [dm3] 3L_7022703_SNP [dm6]	T	G	3.694e^-5	0.829	INTRON Mp
3R	16991762	3R_16991762_SNP [dm3] 3R_21166040_SNP [dm6]	A	C	3.715e^-5	0.829	DOWNSTREAM CG5810 INTRON SNF4Agamma & 1 other
2L	3919358	2L_3919358_SNP [dm3] 2L_3919358_SNP [dm6]	G	A	3.802e^-5	0.829	SYNONYMOUS_CODING fred
3R	26652339	3R_26652339_DEL [dm3] 3R_30826617_DEL [dm6]	TT	T	3.823e^-5	0.829	UTR_3_PRIME cindr DOWNSTREAM cindr INTRON cindr
3R	15169461	3R_15169461_SNP [dm3] 3R_19343739_SNP [dm6]	A	T	3.866e^-5	0.829	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
3R	18916907	3R_18916907_SNP [dm3] 3R_23091185_SNP [dm6]	C	T	3.887e^-5	0.829	UPSTREAM CG6726 & 1 other INTRON CG13830
3L	7411004	3L_7411004_SNP [dm3] 3L_7417904_SNP [dm6]	C	T	3.888e^-5	0.829	INTERGENIC
3R	15278013	3R_15278013_SNP [dm3] 3R_19452291_SNP [dm6]	G	A	3.934e^-5	0.829	INTRON CG31221	TF binding site mE1_TFBS_Kr
2L	3921053	2L_3921053_SNP [dm3] 2L_3921053_SNP [dm6]	C	T	3.953e^-5	0.829	INTRON fred
2L	3922937	2L_3922937_SNP [dm3] 2L_3922937_SNP [dm6]	C	A	4.052e^-5	0.829	INTRON fred
3R	16865891	3R_16865891_SNP [dm3] 3R_21040169_SNP [dm6]	A	G	4.079e^-5	0.829	SYNONYMOUS_CODING Dhc93AB
3L	10626772	3L_10626772_SNP [dm3] 3L_10633672_SNP [dm6]	G	A	4.133e^-5	0.829	SYNONYMOUS_CODING hay DOWNSTREAM E_z_ INTRON CG34001
3R	25503719	3R_25503719_SNP [dm3] 3R_29677997_SNP [dm6]	A	G	4.143e^-5	0.829	SYNONYMOUS_CODING Cap-D2	TF binding site mE1_TFBS_cad
3L	1235378	3L_1235378_SNP [dm3] 3L_1235378_SNP [dm6]	A	T	4.151e^-5	0.829	UTR_3_PRIME CG33966 UPSTREAM CR45747 & 1 other
2L	3923090	2L_3923090_SNP [dm3] 2L_3923090_SNP [dm6]	T	G	4.199e^-5	0.829	INTRON fred
2L	3922923	2L_3922923_MNP [dm3] 2L_3922923_MNP [dm6]	GGGCA	TAATT	4.282e^-5	0.829	INTRON fred
3R	19145269	3R_19145269_SNP [dm3] 3R_23319547_SNP [dm6]	G	T	4.330e^-5	0.829	INTRON pnt	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	25510662	3R_25510662_SNP [dm3] 3R_29684940_SNP [dm6]	T	C	4.353e^-5	0.829	SYNONYMOUS_CODING Gycalpha99B DOWNSTREAM Obp99c	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	2798897	X_2798897_SNP [dm3] X_2904864_SNP [dm6]	A	G	4.394e^-5	0.829	INTRON kirre
3R	16865119	3R_16865119_SNP [dm3] 3R_21039397_SNP [dm6]	A	G	4.513e^-5	0.829	SYNONYMOUS_CODING Dhc93AB
3R	25445500	3R_25445500_SNP [dm3] 3R_29619778_SNP [dm6]	C	T	4.589e^-5	0.829	SYNONYMOUS_CODING CG1907	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
2L	5847501	2L_5847501_SNP [dm3] 2L_5847501_SNP [dm6]	A	C	4.705e^-5	0.829	INTRON TrissinR
X	8044981	X_8044981_SNP [dm3] X_8150948_SNP [dm6]	G	C	4.757e^-5	0.829	UTR_3_PRIME Gbeta5 DOWNSTREAM CG10959	TF binding site mE1_TFBS_cad

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By genomic position
Variant impact
Gene name

PC3_Nutri_Score_Low phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results