DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=1.974e^-1)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_3R_Mo	0.09521

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

1818 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

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Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2R	20508849	2R_20508849_SNP [dm3] 2R_24621326_SNP [dm6]	C	A	7.264e^-7	0.691	INTRON CG13594	TF binding site mE1_TFBS_chinmo
2R	6081981	2R_6081981_SNP [dm3] 2R_10194476_SNP [dm6]	A	T	1.009e^-6	0.691	INTERGENIC
3L	11432809	3L_11432809_SNP [dm3] 3L_11439709_SNP [dm6]	T	A	2.144e^-6	0.691	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15827618	3R_15827618_SNP [dm3] 3R_20001896_SNP [dm6]	T	C	2.426e^-6	0.691	INTRON Hs6st	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2L	9347496	2L_9347496_SNP [dm3] 2L_9347496_SNP [dm6]	T	G	2.482e^-6	0.691	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_kn
3R	15827624	3R_15827624_SNP [dm3] 3R_20001902_SNP [dm6]	T	A	2.570e^-6	0.691	INTRON Hs6st	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2R	9761533	2R_9761533_SNP [dm3] 2R_13874028_SNP [dm6]	C	T	3.280e^-6	0.691	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad
3R	25021116	3R_25021116_SNP [dm3] 3R_29195394_SNP [dm6]	T	G	3.357e^-6	0.691	UPSTREAM CG14509 INTERGENIC
2R	9761569	2R_9761569_SNP [dm3] 2R_13874064_SNP [dm6]	C	G	4.369e^-6	0.691	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad
3R	25021113	3R_25021113_SNP [dm3] 3R_29195391_SNP [dm6]	T	A	4.393e^-6	0.691	UPSTREAM CG14509 INTERGENIC
3R	25021101	3R_25021101_DEL [dm3] 3R_29195379_DEL [dm6]	ATTATATATAT...	A	4.485e^-6	0.691	UPSTREAM CG14509 INTERGENIC
X	11763481	X_11763481_SNP [dm3] X_11869448_SNP [dm6]	G	C	4.741e^-6	0.691	UPSTREAM CG2025 INTRON CG1847	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	11432916	3L_11432916_SNP [dm3] 3L_11439816_SNP [dm6]	T	A	4.792e^-6	0.691	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25021257	3R_25021257_SNP [dm3] 3R_29195535_SNP [dm6]	A	C	5.278e^-6	0.707	UPSTREAM CG14509 INTERGENIC
3L	11432805	3L_11432805_SNP [dm3] 3L_11439705_SNP [dm6]	C	T	5.744e^-6	0.718	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15827641	3R_15827641_SNP [dm3] 3R_20001919_SNP [dm6]	T	C	6.369e^-6	0.746	INTRON Hs6st	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2R	9761500	2R_9761500_SNP [dm3] 2R_13873995_SNP [dm6]	T	C	6.977e^-6	0.758	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad
3L	2480238	3L_2480238_SNP [dm3] 3L_2480238_SNP [dm6]	A	C	7.278e^-6	0.758	INTRON CG45186	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2342361	2L_2342361_SNP [dm3] 2L_2342361_SNP [dm6]	C	G	8.454e^-6	0.834	INTRON CG9967 & 1 other
2R	17362257	2R_17362257_SNP [dm3] 2R_21474752_SNP [dm6]	A	C	1.029e^-5	0.909	INTRON Sdc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Kr mE1_TFBS_Trl mE1_TFBS_zfh1
3R	15827918	3R_15827918_INS [dm3] 3R_20002196_INS [dm6]	C	CA	1.082e^-5	0.909	INTRON Hs6st	TF binding site mE1_TFBS_cad
3R	19317605	3R_19317605_SNP [dm3] 3R_23491883_SNP [dm6]	C	T	1.102e^-5	0.909	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	15827612	3R_15827612_SNP [dm3] 3R_20001890_SNP [dm6]	C	T	1.143e^-5	0.909	INTRON Hs6st	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3R	25021230	3R_25021230_SNP [dm3] 3R_29195508_SNP [dm6]	A	C	1.164e^-5	0.909	UPSTREAM CG14509 INTERGENIC
3L	4072434	3L_4072434_SNP [dm3] 3L_4072434_SNP [dm6]	G	A	1.223e^-5	0.917	UPSTREAM wit INTRON Faa	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	25021246	3R_25021246_SNP [dm3] 3R_29195524_SNP [dm6]	C	A	1.275e^-5	0.919	UPSTREAM CG14509 INTERGENIC
X	11763213	X_11763213_SNP [dm3] X_11869180_SNP [dm6]	T	C	1.336e^-5	0.927	UTR_5_PRIME CG1847 UPSTREAM CG2025	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Ubx
3L	11432927	3L_11432927_SNP [dm3] 3L_11439827_SNP [dm6]	G	C	1.454e^-5	0.929	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	1461943	2L_1461943_DEL [dm3] 2L_1461943_DEL [dm6]	GGAG	G	1.460e^-5	0.929	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	11763392	X_11763392_SNP [dm3] X_11869359_SNP [dm6]	T	C	1.496e^-5	0.929	UPSTREAM CG2025 INTRON CG1847	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	11432885	3L_11432885_SNP [dm3] 3L_11439785_SNP [dm6]	C	T	1.553e^-5	0.929	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25021180	3R_25021180_SNP [dm3] 3R_29195458_SNP [dm6]	T	A	1.620e^-5	0.929	UPSTREAM CG14509 INTERGENIC
2R	10932536	2R_10932536_SNP [dm3] 2R_15045031_SNP [dm6]	T	C	1.643e^-5	0.929	INTERGENIC
2R	9767013	2R_9767013_SNP [dm3] 2R_13879508_SNP [dm6]	C	A	1.774e^-5	0.929	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	17657662	3R_17657662_SNP [dm3] 3R_21831940_SNP [dm6]	G	A	1.816e^-5	0.929	UPSTREAM Gr93a INTERGENIC
2L	9349024	2L_9349024_SNP [dm3] 2L_9349024_SNP [dm6]	G	T	1.857e^-5	0.929	UPSTREAM CG43350 EXON CR44802
3L	11432923	3L_11432923_SNP [dm3] 3L_11439823_SNP [dm6]	G	A	2.063e^-5	0.929	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	1297009	2L_1297009_SNP [dm3] 2L_1297009_SNP [dm6]	G	A	2.073e^-5	0.929	DOWNSTREAM robo3 INTERGENIC
3R	14036690	3R_14036690_SNP [dm3] 3R_18210968_SNP [dm6]	T	G	2.398e^-5	0.929	INTRON CG7985
2L	1909025	2L_1909025_SNP [dm3] 2L_1909025_SNP [dm6]	A	G	2.471e^-5	0.929	INTRON CG7337
2R	13424764	2R_13424764_SNP [dm3] 2R_17537259_SNP [dm6]	T	C	2.481e^-5	0.929	SYNONYMOUS_CODING eIF3-S9	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	10220542	3R_10220542_SNP [dm3] 3R_14394820_SNP [dm6]	G	A	2.525e^-5	0.929	SYNONYMOUS_CODING cv-c	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	11762974	X_11762974_SNP [dm3] X_11868941_SNP [dm6]	T	C	2.588e^-5	0.929	UPSTREAM CG1847 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3R	17657812	3R_17657812_SNP [dm3] 3R_21832090_SNP [dm6]	A	T	2.672e^-5	0.929	UPSTREAM Gr93a INTERGENIC
3R	17657815	3R_17657815_SNP [dm3] 3R_21832093_SNP [dm6]	G	C	2.672e^-5	0.929	UPSTREAM Gr93a INTERGENIC
X	15172950	X_15172950_SNP [dm3] X_15278917_SNP [dm6]	A	T	2.690e^-5	0.929	INTERGENIC
X	3262467	X_3262467_SNP [dm3] X_3368434_SNP [dm6]	C	G	2.721e^-5	0.929	INTERGENIC	enhancer mE1_CBP_Enhancers TF binding site BDTNP1_TFBS_dl
X	11762948	X_11762948_SNP [dm3] X_11868915_SNP [dm6]	C	G	2.729e^-5	0.929	UPSTREAM CG1847 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
X	20411217	X_20411217_SNP [dm3] X_20540190_SNP [dm6]	A	G	2.731e^-5	0.929	INTRON RunxB	TF binding site mE1_TFBS_inv
3R	17657758	3R_17657758_SNP [dm3] 3R_21832036_SNP [dm6]	A	G	2.769e^-5	0.929	UPSTREAM Gr93a INTERGENIC
3R	18209725	3R_18209725_SNP [dm3] 3R_22384003_SNP [dm6]	C	T	2.815e^-5	0.929	SYNONYMOUS_CODING CG43343
3L	4072406	3L_4072406_SNP [dm3] 3L_4072406_SNP [dm6]	A	G	2.922e^-5	0.929	SYNONYMOUS_CODING Faa UPSTREAM wit	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	2469911	3L_2469911_SNP [dm3] 3L_2469911_SNP [dm6]	T	G	2.924e^-5	0.929	INTRON CG45186	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	16921298	X_16921298_SNP [dm3] X_17027265_SNP [dm6]	C	A	2.992e^-5	0.929	INTRON CG45002
3R	15827601	3R_15827601_SNP [dm3] 3R_20001879_SNP [dm6]	T	C	3.196e^-5	0.929	INTRON Hs6st	TF binding site BDTNP1_TFBS_twi
3L	11432908	3L_11432908_SNP [dm3] 3L_11439808_SNP [dm6]	A	T	3.208e^-5	0.929	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	7266101	2R_7266101_SNP [dm3] 2R_11378596_SNP [dm6]	T	C	3.210e^-5	0.929	INTRON Tsp47F
2L	16527082	2L_16527082_SNP [dm3] 2L_16527082_SNP [dm6]	C	T	3.285e^-5	0.929	INTRON CG5953	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
X	16811044	X_16811044_SNP [dm3] X_16917011_SNP [dm6]	G	A	3.336e^-5	0.929	INTRON CG4928	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
3R	10220668	3R_10220668_SNP [dm3] 3R_14394946_SNP [dm6]	G	T	3.451e^-5	0.929	SYNONYMOUS_CODING cv-c	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	6445596	3L_6445596_SNP [dm3] 3L_6452496_SNP [dm6]	T	A	3.462e^-5	0.929	INTRON CG42747
X	743584	X_743584_SNP [dm3] X_849551_SNP [dm6]	T	A	3.470e^-5	0.929	INTRON CG43867
3R	25429121	3R_25429121_SNP [dm3] 3R_29603399_SNP [dm6]	C	T	3.484e^-5	0.929	INTRON alph
2R	7291437	2R_7291437_SNP [dm3] 2R_11403932_SNP [dm6]	C	T	3.492e^-5	0.929	UPSTREAM tRNA:CR45106 INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	26551102	3R_26551102_SNP [dm3] 3R_30725380_SNP [dm6]	T	C	3.506e^-5	0.929	UPSTREAM CG1340 INTERGENIC
3R	25021274	3R_25021274_DEL [dm3] 3R_29195552_DEL [dm6]	AA	A	3.531e^-5	0.929	UPSTREAM CG14509 INTERGENIC
2R	19120478	2R_19120478_SNP [dm3] 2R_23232955_SNP [dm6]	T	C	3.600e^-5	0.929	NON_SYNONYMOUS_CODING CG3092	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	11528207	2L_11528207_SNP [dm3] 2L_11528207_SNP [dm6]	A	G	3.600e^-5	0.929	UPSTREAM CG31705 DOWNSTREAM CG31706 INTERGENIC
3R	25021199	3R_25021199_SNP [dm3] 3R_29195477_SNP [dm6]	T	C	3.601e^-5	0.929	UPSTREAM CG14509 INTERGENIC
X	2485032	X_2485032_SNP [dm3] X_2590999_SNP [dm6]	G	A	3.672e^-5	0.929	INTRON egh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_sens
X	2485251	X_2485251_SNP [dm3] X_2591218_SNP [dm6]	T	C	3.672e^-5	0.929	UPSTREAM egh INTRON egh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	2485252	X_2485252_SNP [dm3] X_2591219_SNP [dm6]	G	A	3.672e^-5	0.929	UPSTREAM egh INTRON egh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	9348038	2L_9348038_SNP [dm3] 2L_9348038_SNP [dm6]	T	G	3.679e^-5	0.929	DOWNSTREAM CR44802 INTERGENIC	TF binding site mE1_TFBS_kn
3L	7231467	3L_7231467_SNP [dm3] 3L_7238367_SNP [dm6]	A	T	3.715e^-5	0.929	UPSTREAM BHD & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_Med
2L	20323760	2L_20323760_SNP [dm3] 2L_20323760_SNP [dm6]	A	T	3.751e^-5	0.929	INTRON spir	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	2485023	X_2485023_SNP [dm3] X_2590990_SNP [dm6]	G	C	3.923e^-5	0.929	INTRON egh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_sens
3R	13559025	3R_13559025_SNP [dm3] 3R_17733303_SNP [dm6]	A	G	3.999e^-5	0.929	UPSTREAM CG14321 DOWNSTREAM Lgr1 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
3R	17657765	3R_17657765_SNP [dm3] 3R_21832043_SNP [dm6]	T	C	4.156e^-5	0.929	UPSTREAM Gr93a INTERGENIC
2R	20393926	2R_20393926_SNP [dm3] 2R_24506403_SNP [dm6]	C	A	4.241e^-5	0.929	UPSTREAM CG13581 INTERGENIC
3L	13128758	3L_13128758_SNP [dm3] 3L_13135658_SNP [dm6]	A	T	4.256e^-5	0.929	UPSTREAM CG33262 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	3752970	2L_3752970_SNP [dm3] 2L_3752970_SNP [dm6]	C	T	4.307e^-5	0.929	UTR_3_PRIME CG10019
3L	10043142	3L_10043142_SNP [dm3] 3L_10050042_SNP [dm6]	T	A	4.538e^-5	0.929	INTRON dpr6
3R	10971554	3R_10971554_SNP [dm3] 3R_15145832_SNP [dm6]	G	C	4.560e^-5	0.929	UPSTREAM GlyS INTRON GlyS	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	9348331	2L_9348331_DEL [dm3] 2L_9348331_DEL [dm6]	TT	T	4.693e^-5	0.929	DOWNSTREAM CR44802 INTERGENIC
X	8643530	X_8643530_SNP [dm3] X_8749497_SNP [dm6]	T	G	4.739e^-5	0.929	INTERGENIC
X	13206982	X_13206982_SNP [dm3] X_13312949_SNP [dm6]	G	C	4.772e^-5	0.929	INTRON IP3K2
3R	5906204	3R_5906204_SNP [dm3] 3R_10080482_SNP [dm6]	T	C	4.842e^-5	0.929	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	17657753	3R_17657753_INS [dm3] 3R_21832031_INS [dm6]	C	AG	4.915e^-5	0.929	UPSTREAM Gr93a INTERGENIC
X	5005235	X_5005235_SNP [dm3] X_5111202_SNP [dm6]	G	A	4.995e^-5	0.929	INTRON rg & 1 other
3R	5705601	3R_5705601_SNP [dm3] 3R_9879879_SNP [dm6]	G	C	5.010e^-5	0.929	INTRON Glut4EF	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
3L	899496	3L_899496_SNP [dm3] 3L_899496_SNP [dm6]	C	T	5.033e^-5	0.929	DOWNSTREAM CG34057 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	17661320	3R_17661320_SNP [dm3] 3R_21835598_SNP [dm6]	G	T	5.047e^-5	0.929	INTERGENIC
3R	23267511	3R_23267511_SNP [dm3] 3R_27441789_SNP [dm6]	C	T	5.124e^-5	0.929	UPSTREAM CG44290 DOWNSTREAM CG43447 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	1286709	3L_1286709_DEL [dm3] 3L_1286709_DEL [dm6]	AGTGA	A	5.124e^-5	0.929	INTRON CG32333
3L	11432769	3L_11432769_SNP [dm3] 3L_11439669_SNP [dm6]	C	T	5.196e^-5	0.929	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9693301	3R_9693301_SNP [dm3] 3R_13867579_SNP [dm6]	A	G	5.198e^-5	0.929	SYNONYMOUS_CODING E5	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	3261392	X_3261392_SNP [dm3] X_3367359_SNP [dm6]	C	T	5.222e^-5	0.929	INTERGENIC	enhancer mE1_CBP_Enhancers TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	11323692	2L_11323692_DEL [dm3] 2L_11323692_DEL [dm6]	CCAGACTC	C	5.277e^-5	0.929	INTERGENIC
3L	4072430	3L_4072430_SNP [dm3] 3L_4072430_SNP [dm6]	G	A	5.279e^-5	0.929	SPLICE_SITE_REGION Faa SYNONYMOUS_CODING Faa UPSTREAM wit	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	15765306	3L_15765306_SNP [dm3] 3L_15772206_SNP [dm6]	A	G	5.353e^-5	0.929	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA

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By genomic position
Variant impact
Gene name

mn_Triglyceri_HiDiet phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results