DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=1.977e^-1)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2197 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

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Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	6404817	3R_6404817_SNP [dm3] 3R_10579095_SNP [dm6]	A	C	3.299e^-7	0.618	INTRON hth	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA
3L	4811585	3L_4811585_SNP [dm3] 3L_4811585_SNP [dm6]	C	A	1.048e^-6	0.627	SYNONYMOUS_CODING Dhc64C
X	17715708	X_17715708_DEL [dm3] X_17821675_DEL [dm6]	TGTTACT	T	1.506e^-6	0.627	UTR_3_PRIME Socs16D	TF binding site BDTNP1_TFBS_dl mE1_TFBS_kn
X	17715695	X_17715695_SNP [dm3] X_17821662_SNP [dm6]	C	T	1.724e^-6	0.627	UTR_3_PRIME Socs16D	TF binding site BDTNP1_TFBS_dl mE1_TFBS_kn
3R	23998886	3R_23998886_SNP [dm3] 3R_28173164_SNP [dm6]	A	T	1.817e^-6	0.627	INTRON CG34354
3L	15081132	3L_15081132_INS [dm3] 3L_15088032_INS [dm6]	T	TTATTTGATTT...	2.154e^-6	0.627	INTRON cp309
3L	12626933	3L_12626933_SNP [dm3] 3L_12633833_SNP [dm6]	T	C	2.406e^-6	0.627	INTRON CR32111 EXON CR32111	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	17715730	X_17715730_SNP [dm3] X_17821697_SNP [dm6]	T	A	2.813e^-6	0.627	UTR_3_PRIME Socs16D
3L	1488622	3L_1488622_SNP [dm3] 3L_1488622_SNP [dm6]	T	C	3.210e^-6	0.627	UPSTREAM CR43701 & 1 other INTRON stet
3R	23998897	3R_23998897_DEL [dm3] 3R_28173175_DEL [dm6]	TT	T	3.918e^-6	0.627	INTRON CG34354
2L	19217493	2L_19217493_SNP [dm3] 2L_19217493_SNP [dm6]	T	C	4.069e^-6	0.627	EXON CR44189	TF binding site BDTNP1_TFBS_gt mE1_TFBS_HSA mE1_TFBS_sens
2L	1070360	2L_1070360_SNP [dm3] 2L_1070360_SNP [dm6]	G	A	5.059e^-6	0.627	INTRON S	TF binding site mE1_TFBS_cad
3L	8366872	3L_8366872_SNP [dm3] 3L_8373772_SNP [dm6]	G	A	5.616e^-6	0.627	INTRON ImpE1
2L	17768131	2L_17768131_SNP [dm3] 2L_17768131_SNP [dm6]	C	T	5.802e^-6	0.627	INTRON CadN
2R	18399857	2R_18399857_SNP [dm3] 2R_22512352_SNP [dm6]	G	A	6.553e^-6	0.627	INTRON px	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl mE1_TFBS_Ubx
3R	6405090	3R_6405090_SNP [dm3] 3R_10579368_SNP [dm6]	C	T	6.881e^-6	0.627	INTRON hth	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
2R	18399884	2R_18399884_SNP [dm3] 2R_22512379_SNP [dm6]	A	G	7.200e^-6	0.627	INTRON px	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl mE1_TFBS_Ubx
3L	10038229	3L_10038229_SNP [dm3] 3L_10045129_SNP [dm6]	C	T	7.652e^-6	0.627	INTRON dpr6
X	16222278	X_16222278_SNP [dm3] X_16328245_SNP [dm6]	G	A	7.891e^-6	0.627	UTR_3_PRIME CalpC DOWNSTREAM CG9919
2R	18399894	2R_18399894_SNP [dm3] 2R_22512389_SNP [dm6]	T	C	8.341e^-6	0.627	INTRON px	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl mE1_TFBS_Ubx
2L	684965	2L_684965_DEL [dm3] 2L_684965_DEL [dm6]	TTCCTT	T	8.567e^-6	0.627	INTRON ds	TF binding site BDTNP1_TFBS_dl
3R	23669794	3R_23669794_SNP [dm3] 3R_27844072_SNP [dm6]	A	G	8.796e^-6	0.627	INTRON CG34353
3L	1488581	3L_1488581_SNP [dm3] 3L_1488581_SNP [dm6]	T	A	9.473e^-6	0.627	UPSTREAM CR43701 & 1 other INTRON stet
3R	16962199	3R_16962199_SNP [dm3] 3R_21136477_SNP [dm6]	C	T	9.525e^-6	0.627	UPSTREAM Ubpy INTRON Ubpy
2R	12041439	2R_12041439_SNP [dm3] 2R_16153934_SNP [dm6]	G	A	9.757e^-6	0.627	INTRON lbk	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	5604059	X_5604059_SNP [dm3] X_5710026_SNP [dm6]	G	A	1.033e^-5	0.627	SYNONYMOUS_CODING CG33080	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3L	6971370	3L_6971370_SNP [dm3] 3L_6978270_SNP [dm6]	T	A	1.049e^-5	0.627	INTRON Galphai EXON CR32385	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	3257491	2R_3257491_SNP [dm3] 2R_7369986_SNP [dm6]	T	C	1.145e^-5	0.627	INTRON Dscam1
3R	21877137	3R_21877137_SNP [dm3] 3R_26051415_SNP [dm6]	A	G	1.204e^-5	0.627	SYNONYMOUS_CODING Exo84	TF binding site BDTNP1_TFBS_prd
3R	21877167	3R_21877167_SNP [dm3] 3R_26051445_SNP [dm6]	A	G	1.235e^-5	0.627	SYNONYMOUS_CODING Exo84	TF binding site BDTNP1_TFBS_prd
3L	13049594	3L_13049594_SNP [dm3] 3L_13056494_SNP [dm6]	G	A	1.313e^-5	0.627	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17996511	3L_17996511_SNP [dm3] 3L_18003411_SNP [dm6]	C	G	1.322e^-5	0.627	UPSTREAM snoRNA:Me28S-A30 INTRON Eip75B	TF binding site BDTNP1_TFBS_dl
3L	10697113	3L_10697113_SNP [dm3] 3L_10704013_SNP [dm6]	A	C	1.361e^-5	0.627	INTERGENIC
3R	24817233	3R_24817233_SNP [dm3] 3R_28991511_SNP [dm6]	G	C	1.365e^-5	0.627	INTERGENIC
2L	9983616	2L_9983616_SNP [dm3] 2L_9983616_SNP [dm6]	A	G	1.411e^-5	0.627	DOWNSTREAM CR13130 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
2L	9983637	2L_9983637_SNP [dm3] 2L_9983637_SNP [dm6]	A	G	1.422e^-5	0.627	DOWNSTREAM CR13130 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
2L	17749366	2L_17749366_SNP [dm3] 2L_17749366_SNP [dm6]	A	T	1.453e^-5	0.627	INTRON CadN	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	13571655	3R_13571655_SNP [dm3] 3R_17745933_SNP [dm6]	G	A	1.455e^-5	0.627	UTR_3_PRIME TyrRII	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	16991456	3R_16991456_SNP [dm3] 3R_21165734_SNP [dm6]	C	G	1.456e^-5	0.627	NON_SYNONYMOUS_CODING Snmp1 DOWNSTREAM CG5810 INTRON SNF4Agamma
2R	3169429	2R_3169429_SNP [dm3] 2R_7281924_SNP [dm6]	A	G	1.483e^-5	0.627	UPSTREAM pwn DOWNSTREAM Incenp INTERGENIC	TF binding site mE1_TFBS_HSA
3L	14150145	3L_14150145_SNP [dm3] 3L_14157045_SNP [dm6]	G	T	1.496e^-5	0.627	INTERGENIC	regulatory region REDfly_CRMs
2L	15990382	2L_15990382_SNP [dm3] 2L_15990382_SNP [dm6]	A	T	1.509e^-5	0.627	DOWNSTREAM CR43412 INTERGENIC
2L	1070334	2L_1070334_SNP [dm3] 2L_1070334_SNP [dm6]	G	A	1.545e^-5	0.627	INTRON S	TF binding site mE1_TFBS_cad
3L	1488578	3L_1488578_SNP [dm3] 3L_1488578_SNP [dm6]	A	G	1.566e^-5	0.627	UPSTREAM CR43701 & 1 other INTRON stet
3R	8935804	3R_8935804_SNP [dm3] 3R_13110082_SNP [dm6]	T	C	1.581e^-5	0.627	INTRON timeout
3L	13049597	3L_13049597_SNP [dm3] 3L_13056497_SNP [dm6]	A	G	1.592e^-5	0.627	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	16962381	3R_16962381_SNP [dm3] 3R_21136659_SNP [dm6]	G	C	1.630e^-5	0.627	INTRON Ubpy
3L	12772601	3L_12772601_SNP [dm3] 3L_12779501_SNP [dm6]	C	T	1.639e^-5	0.627	SYNONYMOUS_CODING CG10969 UPSTREAM CG32106	TF binding site mE1_TFBS_sens
3L	7587076	3L_7587076_SNP [dm3] 3L_7593976_SNP [dm6]	G	T	1.673e^-5	0.627	INTRON CG33275
2L	18792029	2L_18792029_SNP [dm3] 2L_18792029_SNP [dm6]	A	G	1.674e^-5	0.627	INTRON ham
2R	18394252	2R_18394252_SNP [dm3] 2R_22506747_SNP [dm6]	C	T	1.808e^-5	0.665	INTRON px	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D
2L	6328490	2L_6328490_SNP [dm3] 2L_6328490_SNP [dm6]	C	T	1.857e^-5	0.668	SYNONYMOUS_CODING PDZ-GEF	TF binding site mE1_TFBS_cad
X	16230841	X_16230841_SNP [dm3] X_16336808_SNP [dm6]	C	T	1.946e^-5	0.668	INTRON Dsp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	11366640	3L_11366640_SNP [dm3] 3L_11373540_SNP [dm6]	T	A	1.960e^-5	0.668	INTERGENIC
3L	13560913	3L_13560913_INS [dm3] 3L_13567813_INS [dm6]	C	CC	1.973e^-5	0.668	INTRON bru-3
2R	9127159	2R_9127159_SNP [dm3] 2R_13239654_SNP [dm6]	T	A	1.996e^-5	0.668	UPSTREAM GstE14 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
2L	17713037	2L_17713037_SNP [dm3] 2L_17713037_SNP [dm6]	G	C	2.049e^-5	0.674	INTRON CadN
3L	16746813	3L_16746813_SNP [dm3] 3L_16753713_SNP [dm6]	G	T	2.280e^-5	0.7	INTERGENIC	TF binding site mE1_TFBS_cad
2L	18290678	2L_18290678_SNP [dm3] 2L_18290678_SNP [dm6]	C	T	2.316e^-5	0.7	DOWNSTREAM CG43362 EXON CR44696
3R	6722618	3R_6722618_SNP [dm3] 3R_10896896_SNP [dm6]	T	C	2.344e^-5	0.7	DOWNSTREAM Leash EXON CR45577	TF binding site BDTNP1_TFBS_sna
2L	18384190	2L_18384190_SNP [dm3] 2L_18384190_SNP [dm6]	C	T	2.356e^-5	0.7	INTRON Fas3	TF binding site mE1_TFBS_cad
2L	15990388	2L_15990388_SNP [dm3] 2L_15990388_SNP [dm6]	A	G	2.377e^-5	0.7	DOWNSTREAM CR43412 INTERGENIC
2L	18532549	2L_18532549_SNP [dm3] 2L_18532549_SNP [dm6]	A	C	2.387e^-5	0.7	UTR_3_PRIME Pde11 DOWNSTREAM Pde11 & 1 other
2L	14447668	2L_14447668_SNP [dm3] 2L_14447668_SNP [dm6]	T	C	2.391e^-5	0.7	DOWNSTREAM CR45726 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	18508256	2L_18508256_SNP [dm3] 2L_18508256_SNP [dm6]	A	G	2.452e^-5	0.707	INTERGENIC
3L	9489943	3L_9489943_DEL [dm3] 3L_9496843_DEL [dm6]	TT	T	2.639e^-5	0.744	INTRON path
2R	8481932	2R_8481932_SNP [dm3] 2R_12594427_SNP [dm6]	T	G	2.696e^-5	0.744	UPSTREAM CR45279 DOWNSTREAM CR43909 INTRON Amph	TF binding site BDTNP1_TFBS_dl
2R	3257560	2R_3257560_SNP [dm3] 2R_7370055_SNP [dm6]	C	T	2.762e^-5	0.744	INTRON Dscam1
3L	8374408	3L_8374408_SNP [dm3] 3L_8381308_SNP [dm6]	A	T	2.988e^-5	0.744	INTRON ImpE1
2R	8542587	2R_8542587_SNP [dm3] 2R_12655082_SNP [dm6]	C	A	2.997e^-5	0.744	SYNONYMOUS_CODING ZnT49B UPSTREAM CG8646
2R	8542622	2R_8542622_SNP [dm3] 2R_12655117_SNP [dm6]	G	A	2.997e^-5	0.744	UPSTREAM CG8646 INTRON ZnT49B
2R	9127115	2R_9127115_SNP [dm3] 2R_13239610_SNP [dm6]	A	C	3.021e^-5	0.744	UPSTREAM GstE14 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
2L	17768323	2L_17768323_SNP [dm3] 2L_17768323_SNP [dm6]	G	A	3.034e^-5	0.744	INTRON CadN
3L	13633515	3L_13633515_SNP [dm3] 3L_13640415_SNP [dm6]	C	G	3.046e^-5	0.744	INTRON bru-3	TF binding site mE1_TFBS_chinmo
2L	18547106	2L_18547106_SNP [dm3] 2L_18547106_SNP [dm6]	T	A	3.078e^-5	0.744	INTRON Pde11
3R	12516171	3R_12516171_SNP [dm3] 3R_16690449_SNP [dm6]	G	T	3.103e^-5	0.744	INTRON Ubx	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	16230647	X_16230647_SNP [dm3] X_16336614_SNP [dm6]	C	T	3.109e^-5	0.744	SYNONYMOUS_CODING Dsp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	9983576	2L_9983576_SNP [dm3] 2L_9983576_SNP [dm6]	A	G	3.224e^-5	0.744	DOWNSTREAM CR13130 INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
3R	6494423	3R_6494423_SNP [dm3] 3R_10668701_SNP [dm6]	C	T	3.242e^-5	0.744	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	10697056	3L_10697056_SNP [dm3] 3L_10703956_SNP [dm6]	A	T	3.261e^-5	0.744	INTERGENIC
3R	3633523	3R_3633523_SNP [dm3] 3R_7807801_SNP [dm6]	A	T	3.273e^-5	0.744	INTRON CG2993	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	21877161	3R_21877161_SNP [dm3] 3R_26051439_SNP [dm6]	A	G	3.369e^-5	0.744	SYNONYMOUS_CODING Exo84	TF binding site BDTNP1_TFBS_prd
2L	7096505	2L_7096505_SNP [dm3] 2L_7096505_SNP [dm6]	T	C	3.381e^-5	0.744	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	12660192	2R_12660192_SNP [dm3] 2R_16772687_SNP [dm6]	G	A	3.495e^-5	0.744	UPSTREAM unc-104 DOWNSTREAM Sod2 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	6722250	3R_6722250_SNP [dm3] 3R_10896528_SNP [dm6]	C	T	3.500e^-5	0.744	DOWNSTREAM Leash EXON CR45577	TF binding site BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn
3R	9081589	3R_9081589_SNP [dm3] 3R_13255867_SNP [dm6]	C	T	3.579e^-5	0.744	INTRON Ace
2R	16239571	2R_16239571_SNP [dm3] 2R_20352066_SNP [dm6]	A	C	3.616e^-5	0.744	INTERGENIC
3R	13489923	3R_13489923_SNP [dm3] 3R_17664201_SNP [dm6]	C	A	3.665e^-5	0.744	SYNONYMOUS_CODING CG14322	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	6980491	3R_6980491_SNP [dm3] 3R_11154769_SNP [dm6]	T	G	3.665e^-5	0.744	NON_SYNONYMOUS_CODING Ugt86Dc UPSTREAM Ugt86Di
2R	17030247	2R_17030247_SNP [dm3] 2R_21142742_SNP [dm6]	G	C	3.682e^-5	0.744	SYNONYMOUS_CODING CG9406 UPSTREAM Magi & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3R	27473879	3R_27473879_SNP [dm3] 3R_31648157_SNP [dm6]	T	A	3.688e^-5	0.744	INTRON kek6
2R	12660175	2R_12660175_SNP [dm3] 2R_16772670_SNP [dm6]	C	T	3.730e^-5	0.744	UTR_5_PRIME unc-104 UPSTREAM unc-104 DOWNSTREAM Sod2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	3633460	3R_3633460_SNP [dm3] 3R_7807738_SNP [dm6]	C	G	3.800e^-5	0.744	SYNONYMOUS_CODING CG2993	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	1488505	3L_1488505_SNP [dm3] 3L_1488505_SNP [dm6]	C	T	3.821e^-5	0.744	SPLICE_SITE_REGION stet UTR_5_PRIME stet UPSTREAM CR43701 & 1 other	TF binding site mE1_TFBS_cad
3L	4242135	3L_4242135_SNP [dm3] 3L_4242135_SNP [dm6]	C	T	3.865e^-5	0.744	UPSTREAM pav INTRON CG14997	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	685855	2L_685855_SNP [dm3] 2L_685855_SNP [dm6]	G	C	3.886e^-5	0.744	INTRON ds
X	16230581	X_16230581_SNP [dm3] X_16336548_SNP [dm6]	C	A	3.903e^-5	0.744	SYNONYMOUS_CODING Dsp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	19037726	3R_19037726_SNP [dm3] 3R_23212004_SNP [dm6]	A	C	3.936e^-5	0.744	INTRON cnc	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cnc mE1_TFBS_HSA
2R	9127105	2R_9127105_SNP [dm3] 2R_13239600_SNP [dm6]	A	G	3.938e^-5	0.744	UPSTREAM GstE14 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3R	16899116	3R_16899116_SNP [dm3] 3R_21073394_SNP [dm6]	C	T	4.016e^-5	0.744	UPSTREAM dmrt93B & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 mE1_TFBS_cad

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By genomic position
Variant impact
Gene name

mn_Glucose_HighDiet phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results