©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
3R | 15262087 | 3R_15262087_SNP [dm3] 3R_19436365_SNP [dm6] | T | C | 2.994e-7 | 0.441 |
INTRON
CG31221 |
||
3R | 26602045 | 3R_26602045_SNP [dm3] 3R_30776323_SNP [dm6] | G | A | 4.856e-7 | 0.441 |
INTRON
zfh1 |
TF binding site
BDTNP1_TFBS_dl
|
|
3L | 10886890 | 3L_10886890_SNP [dm3] 3L_10893790_SNP [dm6] | A | C | 3.296e-6 | 1 |
UPSTREAM
Cpr67Fb DOWNSTREAM Aps EXON CR45171 |
||
2L | 7559398 | 2L_7559398_SNP [dm3] 2L_7559398_SNP [dm6] | A | T | 6.658e-6 | 1 |
INTRON
RapGAP1 |
||
2L | 7559404 | 2L_7559404_SNP [dm3] 2L_7559404_SNP [dm6] | T | A | 6.658e-6 | 1 |
INTRON
RapGAP1 |
||
2L | 7559419 | 2L_7559419_SNP [dm3] 2L_7559419_SNP [dm6] | T | A | 6.658e-6 | 1 |
INTRON
RapGAP1 |
||
3R | 20220181 | 3R_20220181_SNP [dm3] 3R_24394459_SNP [dm6] | C | A | 7.641e-6 | 1 |
UTR_3_PRIME
nAChRalpha1 DOWNSTREAM CG13616 |
||
3R | 15245946 | 3R_15245946_SNP [dm3] 3R_19420224_SNP [dm6] | C | T | 1.083e-5 | 1 |
INTRON
CG31221 |
||
3R | 25304834 | 3R_25304834_SNP [dm3] 3R_29479112_SNP [dm6] | A | T | 1.129e-5 | 1 |
UPSTREAM
Ptp99A INTRON Ptp99A |
TF binding site
mE1_TFBS_cad
|
|
2R | 16200214 | 2R_16200214_SNP [dm3] 2R_20312709_SNP [dm6] | T | A | 1.220e-5 | 1 |
INTRON
CG13868 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 13496591 | 2R_13496591_SNP [dm3] 2R_17609086_SNP [dm6] | C | T | 1.381e-5 | 1 |
SYNONYMOUS_CODING
CG10936 |
||
2R | 3840412 | 2R_3840412_SNP [dm3] 2R_7952907_SNP [dm6] | T | A | 1.392e-5 | 1 |
INTRON
CG14764 |
||
3R | 25361696 | 3R_25361696_SNP [dm3] 3R_29535974_SNP [dm6] | A | G | 1.476e-5 | 1 |
DOWNSTREAM
CR43613 INTERGENIC |
||
2R | 13380794 | 2R_13380794_SNP [dm3] 2R_17493289_SNP [dm6] | G | T | 1.784e-5 | 1 |
UPSTREAM
CG30103 DOWNSTREAM NT5E-2 INTERGENIC |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_HSA
|
|
2R | 13380795 | 2R_13380795_SNP [dm3] 2R_17493290_SNP [dm6] | C | A | 1.784e-5 | 1 |
UPSTREAM
CG30103 DOWNSTREAM NT5E-2 INTERGENIC |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_HSA
|
|
2L | 7558758 | 2L_7558758_SNP [dm3] 2L_7558758_SNP [dm6] | C | T | 1.865e-5 | 1 |
INTRON
RapGAP1 |
||
2R | 16030914 | 2R_16030914_SNP [dm3] 2R_20143409_SNP [dm6] | G | A | 1.869e-5 | 1 |
INTERGENIC
|
||
2R | 16030944 | 2R_16030944_SNP [dm3] 2R_20143439_SNP [dm6] | T | G | 1.869e-5 | 1 |
INTERGENIC
|
||
X | 14460526 | X_14460526_SNP [dm3] X_14566493_SNP [dm6] | A | G | 2.085e-5 | 1 |
INTERGENIC
|
||
3L | 2650104 | 3L_2650104_SNP [dm3] 3L_2650104_SNP [dm6] | C | A | 2.259e-5 | 1 |
UTR_3_PRIME
CG1246 DOWNSTREAM Aats-pro |
TF binding site
mE1_TFBS_HSA
|
|
3L | 15322968 | 3L_15322968_SNP [dm3] 3L_15329868_SNP [dm6] | A | G | 2.290e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
|
|
3R | 10892543 | 3R_10892543_SNP [dm3] 3R_15066821_SNP [dm6] | G | A | 2.350e-5 | 1 |
SYNONYMOUS_CODING
dpr9 |
||
3R | 17740782 | 3R_17740782_SNP [dm3] 3R_21915060_SNP [dm6] | G | A | 2.505e-5 | 1 |
SYNONYMOUS_CODING
CG17843 |
||
X | 18732046 | X_18732046_SNP [dm3] X_18838013_SNP [dm6] | G | A | 2.622e-5 | 1 |
UTR_5_PRIME
Pvf1 INTRON Pvf1 |
||
2R | 4069439 | 2R_4069439_SNP [dm3] 2R_8181934_SNP [dm6] | G | T | 2.643e-5 | 1 |
INTRON
LRP1 |
||
2L | 8448070 | 2L_8448070_SNP [dm3] 2L_8448070_SNP [dm6] | C | T | 2.723e-5 | 1 |
NON_SYNONYMOUS_CODING
U26 UTR_3_PRIME U26 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 18141652 | 3L_18141652_SNP [dm3] 3L_18148552_SNP [dm6] | A | T | 3.455e-5 | 1 |
UPSTREAM
CG7330 INTERGENIC |
TF binding site
mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 18269495 | 3L_18269495_INS [dm3] 3L_18276395_INS [dm6] | C | CTGTTGCAAC | 3.488e-5 | 1 |
INTERGENIC
|
||
X | 18732115 | X_18732115_SNP [dm3] X_18838082_SNP [dm6] | A | G | 3.569e-5 | 1 |
NON_SYNONYMOUS_CODING
Pvf1 SPLICE_SITE_REGION Pvf1 INTRON Pvf1 |
||
3R | 21611424 | 3R_21611424_SNP [dm3] 3R_25785702_SNP [dm6] | A | G | 3.581e-5 | 1 |
DOWNSTREAM
CG4960 INTERGENIC |
||
2R | 11040179 | 2R_11040179_SNP [dm3] 2R_15152674_SNP [dm6] | G | A | 3.947e-5 | 1 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
3L | 784125 | 3L_784125_SNP [dm3] 3L_784125_SNP [dm6] | A | T | 3.962e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
3R | 26602149 | 3R_26602149_SNP [dm3] 3R_30776427_SNP [dm6] | G | A | 3.969e-5 | 1 |
INTRON
zfh1 |
||
3L | 14070495 | 3L_14070495_SNP [dm3] 3L_14077395_SNP [dm6] | G | A | 4.002e-5 | 1 |
INTRON
btl |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA |
|
3L | 14070496 | 3L_14070496_SNP [dm3] 3L_14077396_SNP [dm6] | T | C | 4.002e-5 | 1 |
INTRON
btl |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA |
|
3R | 26601969 | 3R_26601969_SNP [dm3] 3R_30776247_SNP [dm6] | C | T | 4.002e-5 | 1 |
INTRON
zfh1 |
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 1379763 | 2L_1379763_SNP [dm3] 2L_1379763_SNP [dm6] | A | T | 4.088e-5 | 1 |
DOWNSTREAM
CR44898 & 1 other INTERGENIC |
||
2L | 1380054 | 2L_1380054_SNP [dm3] 2L_1380054_SNP [dm6] | C | A | 4.088e-5 | 1 |
DOWNSTREAM
CR44898 & 1 other INTERGENIC |
||
3R | 17740413 | 3R_17740413_SNP [dm3] 3R_21914691_SNP [dm6] | G | C | 4.232e-5 | 1 |
SYNONYMOUS_CODING
CG17843 |
||
2R | 16031004 | 2R_16031004_DEL [dm3] 2R_20143499_DEL [dm6] | TTT | T | 4.281e-5 | 1 |
INTERGENIC
|
||
3L | 9674731 | 3L_9674731_SNP [dm3] 3L_9681631_SNP [dm6] | A | T | 4.446e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674749 | 3L_9674749_SNP [dm3] 3L_9681649_SNP [dm6] | T | C | 4.446e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674750 | 3L_9674750_SNP [dm3] 3L_9681650_SNP [dm6] | G | A | 4.446e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674761 | 3L_9674761_SNP [dm3] 3L_9681661_SNP [dm6] | A | T | 4.446e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674797 | 3L_9674797_SNP [dm3] 3L_9681697_SNP [dm6] | A | C | 4.446e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674804 | 3L_9674804_SNP [dm3] 3L_9681704_SNP [dm6] | C | T | 4.446e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674806 | 3L_9674806_MNP [dm3] 3L_9681706_MNP [dm6] | TGT | AAA | 4.446e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 16037770 | 3L_16037770_INS [dm3] 3L_16044670_INS [dm6] | A | AA | 4.588e-5 | 1 |
INTRON
th |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Stat92E mE1_TFBS_Trl
|
|
3L | 9674839 | 3L_9674839_SNP [dm3] 3L_9681739_SNP [dm6] | A | T | 4.802e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
TF binding site
mE1_TFBS_cad
|
|
2L | 17548530 | 2L_17548530_SNP [dm3] 2L_17548530_SNP [dm6] | A | G | 4.805e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
3R | 26994022 | 3R_26994022_SNP [dm3] 3R_31168300_SNP [dm6] | A | G | 4.850e-5 | 1 |
SYNONYMOUS_CODING
stops UTR_5_PRIME stops INTRON Gycbeta100B |
TF binding site
mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
|
|
2R | 13821783 | 2R_13821783_SNP [dm3] 2R_17934278_SNP [dm6] | C | G | 5.008e-5 | 1 |
INTERGENIC
|
||
2R | 6073805 | 2R_6073805_SNP [dm3] 2R_10186300_SNP [dm6] | T | C | 5.062e-5 | 1 |
INTRON
KCNQ |
||
3L | 15164023 | 3L_15164023_SNP [dm3] 3L_15170923_SNP [dm6] | A | G | 5.218e-5 | 1 |
INTERGENIC
|
||
2L | 15328923 | 2L_15328923_SNP [dm3] 2L_15328923_SNP [dm6] | A | T | 5.323e-5 | 1 |
INTERGENIC
|
||
2L | 17564336 | 2L_17564336_SNP [dm3] 2L_17564336_SNP [dm6] | A | C | 5.325e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2L | 15371920 | 2L_15371920_SNP [dm3] 2L_15371920_SNP [dm6] | A | C | 5.493e-5 | 1 |
INTERGENIC
|
||
2R | 13381144 | 2R_13381144_SNP [dm3] 2R_17493639_SNP [dm6] | C | G | 5.527e-5 | 1 |
UPSTREAM
CG30103 DOWNSTREAM NT5E-2 INTERGENIC |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_HSA
|
|
2L | 17547043 | 2L_17547043_SNP [dm3] 2L_17547043_SNP [dm6] | A | T | 5.572e-5 | 1 |
UPSTREAM
CR45697 INTERGENIC |
||
2L | 17547493 | 2L_17547493_SNP [dm3] 2L_17547493_SNP [dm6] | A | G | 5.572e-5 | 1 |
EXON
CR45697 |
||
2L | 17547914 | 2L_17547914_SNP [dm3] 2L_17547914_SNP [dm6] | T | G | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17547922 | 2L_17547922_SNP [dm3] 2L_17547922_SNP [dm6] | A | G | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17547939 | 2L_17547939_SNP [dm3] 2L_17547939_SNP [dm6] | C | A | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548069 | 2L_17548069_SNP [dm3] 2L_17548069_SNP [dm6] | C | T | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548071 | 2L_17548071_SNP [dm3] 2L_17548071_SNP [dm6] | A | T | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548073 | 2L_17548073_SNP [dm3] 2L_17548073_SNP [dm6] | C | A | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548092 | 2L_17548092_SNP [dm3] 2L_17548092_SNP [dm6] | C | A | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548093 | 2L_17548093_SNP [dm3] 2L_17548093_SNP [dm6] | A | T | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548236 | 2L_17548236_SNP [dm3] 2L_17548236_SNP [dm6] | T | C | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548467 | 2L_17548467_SNP [dm3] 2L_17548467_SNP [dm6] | T | G | 5.572e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17558011 | 2L_17558011_DEL [dm3] 2L_17558011_DEL [dm6] | TCCA | T | 5.572e-5 | 1 |
INTERGENIC
|
||
2L | 17561087 | 2L_17561087_SNP [dm3] 2L_17561087_SNP [dm6] | T | A | 5.572e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_z mE1_TFBS_HSA
|
|
2L | 16132607 | 2L_16132607_SNP [dm3] 2L_16132607_SNP [dm6] | T | A | 5.574e-5 | 1 |
UPSTREAM
CG4892 INTERGENIC |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3L | 9934180 | 3L_9934180_SNP [dm3] 3L_9941080_SNP [dm6] | C | G | 5.599e-5 | 1 |
INTRON
CG34356 |
TF binding site
BDTNP1_TFBS_hb
|
|
3L | 9934181 | 3L_9934181_SNP [dm3] 3L_9941081_SNP [dm6] | G | A | 5.599e-5 | 1 |
INTRON
CG34356 |
TF binding site
BDTNP1_TFBS_hb
|
|
2L | 17548020 | 2L_17548020_SNP [dm3] 2L_17548020_SNP [dm6] | T | C | 5.886e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548049 | 2L_17548049_INS [dm3] 2L_17548049_INS [dm6] | T | TACCAACATACACT... | 5.886e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548097 | 2L_17548097_SNP [dm3] 2L_17548097_SNP [dm6] | C | T | 5.886e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17548644 | 2L_17548644_SNP [dm3] 2L_17548644_SNP [dm6] | C | A | 5.886e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17551917 | 2L_17551917_SNP [dm3] 2L_17551917_SNP [dm6] | C | G | 5.886e-5 | 1 |
INTERGENIC
|
||
2L | 17551918 | 2L_17551918_SNP [dm3] 2L_17551918_SNP [dm6] | C | A | 5.886e-5 | 1 |
INTERGENIC
|
||
2L | 17548549 | 2L_17548549_SNP [dm3] 2L_17548549_SNP [dm6] | A | G | 6.033e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2R | 16059546 | 2R_16059546_SNP [dm3] 2R_20172041_SNP [dm6] | G | A | 6.045e-5 | 1 |
INTERGENIC
|
TF binding site
mE1_TFBS_Kr
|
|
2L | 17547230 | 2L_17547230_SNP [dm3] 2L_17547230_SNP [dm6] | A | G | 6.194e-5 | 1 |
EXON
CR45697 |
||
2L | 17560949 | 2L_17560949_SNP [dm3] 2L_17560949_SNP [dm6] | C | T | 6.194e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_z mE1_TFBS_HSA
|
|
2L | 17547978 | 2L_17547978_SNP [dm3] 2L_17547978_SNP [dm6] | T | A | 6.307e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2L | 17547983 | 2L_17547983_INS [dm3] 2L_17547983_INS [dm6] | CT | AAAGA | 6.307e-5 | 1 |
DOWNSTREAM
CR45697 INTERGENIC |
||
2R | 13270958 | 2R_13270958_SNP [dm3] 2R_17383453_SNP [dm6] | A | G | 6.351e-5 | 1 |
INTERGENIC
|
||
2L | 7080340 | 2L_7080340_SNP [dm3] 2L_7080340_SNP [dm6] | A | T | 6.406e-5 | 1 |
UPSTREAM
CR44611 INTRON Pvf2 |
||
3L | 9674527 | 3L_9674527_SNP [dm3] 3L_9681427_SNP [dm6] | G | A | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674529 | 3L_9674529_SNP [dm3] 3L_9681429_SNP [dm6] | A | G | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674569 | 3L_9674569_SNP [dm3] 3L_9681469_SNP [dm6] | A | G | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674642 | 3L_9674642_SNP [dm3] 3L_9681542_SNP [dm6] | C | A | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674680 | 3L_9674680_SNP [dm3] 3L_9681580_SNP [dm6] | T | G | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674682 | 3L_9674682_DEL [dm3] 3L_9681582_DEL [dm6] | AACTG | C | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674702 | 3L_9674702_SNP [dm3] 3L_9681602_SNP [dm6] | C | T | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
3L | 9674710 | 3L_9674710_SNP [dm3] 3L_9681610_SNP [dm6] | C | T | 6.416e-5 | 1 |
DOWNSTREAM
CG16717 INTRON alphaTub67C |
||
2R | 19189713 | 2R_19189713_SNP [dm3] 2R_23302190_SNP [dm6] | C | T | 6.578e-5 | 1 |
INTERGENIC
|
||
2R | 13270898 | 2R_13270898_SNP [dm3] 2R_17383393_SNP [dm6] | A | G | 6.714e-5 | 1 |
INTERGENIC
|
||
2R | 13270943 | 2R_13270943_SNP [dm3] 2R_17383438_SNP [dm6] | T | C | 6.714e-5 | 1 |
INTERGENIC
|