DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=8.714e^-2)
Null hypothesis is not rejected (p>0.05).
Interpretation: NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2357 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	3002983	3L_3002983_SNP [dm3] 3L_3002983_SNP [dm6]	T	C	1.595e^-6	0.731	UPSTREAM FMRFaR INTRON FMRFaR
2R	10616651	2R_10616651_SNP [dm3] 2R_14729146_SNP [dm6]	T	A	1.639e^-6	0.731	INTERGENIC
3L	2530988	3L_2530988_SNP [dm3] 3L_2530988_SNP [dm6]	A	T	2.307e^-6	0.731	INTRON Spn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	24273489	3R_24273489_SNP [dm3] 3R_28447767_SNP [dm6]	G	A	2.449e^-6	0.731	INTRON beat-VI
3L	3973912	3L_3973912_SNP [dm3] 3L_3973912_SNP [dm6]	G	A	2.849e^-6	0.731	DOWNSTREAM CG43915 INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	3002946	3L_3002946_SNP [dm3] 3L_3002946_SNP [dm6]	T	C	4.778e^-6	0.731	UPSTREAM FMRFaR INTRON FMRFaR
3L	2530907	3L_2530907_SNP [dm3] 3L_2530907_SNP [dm6]	A	T	4.860e^-6	0.731	INTRON Spn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
3L	3002976	3L_3002976_SNP [dm3] 3L_3002976_SNP [dm6]	T	C	5.476e^-6	0.731	UPSTREAM FMRFaR INTRON FMRFaR
2L	17338174	2L_17338174_SNP [dm3] 2L_17338174_SNP [dm6]	G	A	6.845e^-6	0.731	INTERGENIC
2L	17338212	2L_17338212_SNP [dm3] 2L_17338212_SNP [dm6]	T	C	6.845e^-6	0.731	INTERGENIC
3R	23526478	3R_23526478_SNP [dm3] 3R_27700756_SNP [dm6]	A	G	7.255e^-6	0.731	NON_SYNONYMOUS_CODING btz UPSTREAM ALiX	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
3R	25070245	3R_25070245_SNP [dm3] 3R_29244523_SNP [dm6]	A	G	7.712e^-6	0.731	UPSTREAM CG31445 DOWNSTREAM SP1029 INTRON CG31445
3L	3002989	3L_3002989_SNP [dm3] 3L_3002989_SNP [dm6]	C	G	7.919e^-6	0.731	UPSTREAM FMRFaR INTRON FMRFaR
2L	11620215	2L_11620215_SNP [dm3] 2L_11620215_SNP [dm6]	C	T	8.758e^-6	0.731	INTRON kek2	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	21207617	X_21207617_SNP [dm3] X_21336590_SNP [dm6]	T	G	8.953e^-6	0.731	INTRON tty
X	21207622	X_21207622_SNP [dm3] X_21336595_SNP [dm6]	T	C	8.953e^-6	0.731	INTRON tty
X	21207702	X_21207702_SNP [dm3] X_21336675_SNP [dm6]	A	T	8.953e^-6	0.731	INTRON tty
3L	2783449	3L_2783449_SNP [dm3] 3L_2783449_SNP [dm6]	G	A	9.009e^-6	0.731	SYNONYMOUS_CODING pgant6	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	16874529	2L_16874529_SNP [dm3] 2L_16874529_SNP [dm6]	T	C	9.135e^-6	0.731	INTRON CR31781
2L	16874546	2L_16874546_SNP [dm3] 2L_16874546_SNP [dm6]	T	A	9.135e^-6	0.731	INTRON CR31781
3L	3002978	3L_3002978_SNP [dm3] 3L_3002978_SNP [dm6]	C	G	9.880e^-6	0.731	UPSTREAM FMRFaR INTRON FMRFaR
3L	3002952	3L_3002952_SNP [dm3] 3L_3002952_SNP [dm6]	G	T	1.097e^-5	0.731	UPSTREAM FMRFaR INTRON FMRFaR
X	21208450	X_21208450_SNP [dm3] X_21337423_SNP [dm6]	T	C	1.261e^-5	0.731	INTRON tty	TF binding site BDTNP1_TFBS_dl
X	21210982	X_21210982_SNP [dm3] X_21339955_SNP [dm6]	C	A	1.261e^-5	0.731	UPSTREAM tty INTRON fliI	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	11210550	2L_11210550_SNP [dm3] 2L_11210550_SNP [dm6]	G	A	1.302e^-5	0.731	UPSTREAM ab INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	21214426	X_21214426_SNP [dm3] X_21343399_SNP [dm6]	G	A	1.404e^-5	0.731	INTRON fliI	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16996208	2L_16996208_SNP [dm3] 2L_16996208_SNP [dm6]	T	C	1.448e^-5	0.731	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	21208691	X_21208691_SNP [dm3] X_21337664_SNP [dm6]	C	A	1.550e^-5	0.731	INTRON tty	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3R	23517865	3R_23517865_INS [dm3] 3R_27692143_INS [dm6]	G	GG	1.784e^-5	0.731	UTR_3_PRIME CG12880	TF binding site mE1_TFBS_chinmo
2L	16879587	2L_16879587_SNP [dm3] 2L_16879587_SNP [dm6]	C	A	1.785e^-5	0.731	SYNONYMOUS_CODING CG34313 UTR_5_PRIME CG31743 UPSTREAM CG32832	TF binding site BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2L	16874502	2L_16874502_SNP [dm3] 2L_16874502_SNP [dm6]	A	T	1.874e^-5	0.731	INTRON CR31781
2L	16874540	2L_16874540_SNP [dm3] 2L_16874540_SNP [dm6]	C	T	1.874e^-5	0.731	INTRON CR31781
3R	6384114	3R_6384114_SNP [dm3] 3R_10558392_SNP [dm6]	C	G	1.886e^-5	0.731	INTRON hth	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	20879854	2L_20879854_SNP [dm3] 2L_20879854_SNP [dm6]	A	G	2.060e^-5	0.731	INTRON sky & 1 other
3R	23759237	3R_23759237_SNP [dm3] 3R_27933515_SNP [dm6]	T	A	2.108e^-5	0.731	DOWNSTREAM mino INTRON Mes-4
2L	16934432	2L_16934432_SNP [dm3] 2L_16934432_SNP [dm6]	C	T	2.134e^-5	0.731	INTERGENIC
2L	16934446	2L_16934446_SNP [dm3] 2L_16934446_SNP [dm6]	A	G	2.134e^-5	0.731	INTERGENIC
X	13573128	X_13573128_SNP [dm3] X_13679095_SNP [dm6]	C	A	2.152e^-5	0.731	SYNONYMOUS_CODING CG12177
X	8242816	X_8242816_SNP [dm3] X_8348783_SNP [dm6]	A	G	2.191e^-5	0.731	INTRON nAChRalpha3
2L	16996126	2L_16996126_SNP [dm3] 2L_16996126_SNP [dm6]	T	G	2.347e^-5	0.731	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	15305117	2L_15305117_SNP [dm3] 2L_15305117_SNP [dm6]	C	A	2.454e^-5	0.731	INTERGENIC
2L	11324625	2L_11324625_SNP [dm3] 2L_11324625_SNP [dm6]	T	A	2.459e^-5	0.731	INTERGENIC
X	19453307	X_19453307_SNP [dm3] X_19559274_SNP [dm6]	G	A	2.520e^-5	0.731	DOWNSTREAM mir-4966 & 4 others INTERGENIC
2R	12083367	2R_12083367_SNP [dm3] 2R_16195862_SNP [dm6]	C	A	2.588e^-5	0.731	SYNONYMOUS_CODING calypso UPSTREAM CG44242	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Ubx
3L	13057520	3L_13057520_SNP [dm3] 3L_13064420_SNP [dm6]	G	A	2.634e^-5	0.731	DOWNSTREAM CG34429 INTERGENIC
2R	6063640	2R_6063640_SNP [dm3] 2R_10176135_SNP [dm6]	A	G	2.663e^-5	0.731	INTRON KCNQ
3L	3783185	3L_3783185_SNP [dm3] 3L_3783185_SNP [dm6]	G	A	2.694e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3L	5032514	3L_5032514_SNP [dm3] 3L_5032514_SNP [dm6]	A	T	2.698e^-5	0.731	INTRON Con	TF binding site mE1_TFBS_inv
X	3800268	X_3800268_SNP [dm3] X_3906235_SNP [dm6]	G	A	2.850e^-5	0.731	SYNONYMOUS_CODING CG42541	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sbb
2R	11763250	2R_11763250_SNP [dm3] 2R_15875745_SNP [dm6]	G	C	2.860e^-5	0.731	SYNONYMOUS_CODING sli	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	12749929	3R_12749929_SNP [dm3] 3R_16924207_SNP [dm6]	C	A	2.918e^-5	0.731	UPSTREAM iab-8 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	18653456	3R_18653456_SNP [dm3] 3R_22827734_SNP [dm6]	A	G	2.992e^-5	0.731	UPSTREAM CR44350 INTERGENIC
2L	16874536	2L_16874536_SNP [dm3] 2L_16874536_SNP [dm6]	G	T	3.066e^-5	0.731	INTRON CR31781
2R	11721725	2R_11721725_SNP [dm3] 2R_15834220_SNP [dm6]	A	G	3.126e^-5	0.731	INTRON tun & 1 other	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE
3R	23490526	3R_23490526_SNP [dm3] 3R_27664804_SNP [dm6]	G	A	3.169e^-5	0.731	SYNONYMOUS_CODING unc80	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	2531043	3L_2531043_SNP [dm3] 3L_2531043_SNP [dm6]	T	C	3.182e^-5	0.731	INTRON Spn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	16935782	2L_16935782_SNP [dm3] 2L_16935782_SNP [dm6]	C	T	3.192e^-5	0.731	INTERGENIC
3L	8877770	3L_8877770_SNP [dm3] 3L_8884670_SNP [dm6]	T	A	3.233e^-5	0.731	INTRON dally
3R	23531183	3R_23531183_SNP [dm3] 3R_27705461_SNP [dm6]	C	T	3.244e^-5	0.731	SPLICE_SITE_REGION CG12428 INTRON CG12428	TF binding site mE1_TFBS_chinmo
2L	12643551	2L_12643551_SNP [dm3] 2L_12643551_SNP [dm6]	T	C	3.289e^-5	0.731	INTRON Ref2
3R	4791425	3R_4791425_SNP [dm3] 3R_8965703_SNP [dm6]	T	C	3.329e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	15457936	3L_15457936_SNP [dm3] 3L_15464836_SNP [dm6]	G	T	3.369e^-5	0.731	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	19174335	3R_19174335_SNP [dm3] 3R_23348613_SNP [dm6]	A	G	3.528e^-5	0.731	SYNONYMOUS_CODING DNApol-epsilon	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
3R	26039909	3R_26039909_SNP [dm3] 3R_30214187_SNP [dm6]	G	C	3.659e^-5	0.731	UPSTREAM CecB INTERGENIC
3R	6480607	3R_6480607_SNP [dm3] 3R_10654885_SNP [dm6]	T	C	3.690e^-5	0.731	INTERGENIC
3R	23652339	3R_23652339_SNP [dm3] 3R_27826617_SNP [dm6]	A	G	3.729e^-5	0.731	INTRON CG34353	TF binding site BDTNP1_TFBS_da
3R	19558544	3R_19558544_SNP [dm3] 3R_23732822_SNP [dm6]	C	T	3.747e^-5	0.731	SYNONYMOUS_CODING Rpn9 UPSTREAM Hmgcr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	10478277	3L_10478277_SNP [dm3] 3L_10485177_SNP [dm6]	G	A	3.794e^-5	0.731	INTRON A2bp1
X	20324770	X_20324770_SNP [dm3] X_20453743_SNP [dm6]	A	G	3.798e^-5	0.731	INTRON CG32506
2L	20609650	2L_20609650_SNP [dm3] 2L_20609650_SNP [dm6]	C	T	3.865e^-5	0.731	INTRON CR44909
3L	9515705	3L_9515705_SNP [dm3] 3L_9522605_SNP [dm6]	A	T	3.874e^-5	0.731	INTRON CG33700
X	21210364	X_21210364_SNP [dm3] X_21339337_SNP [dm6]	G	A	3.955e^-5	0.731	UPSTREAM fliI & 1 other INTRON tty	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Stat92E mE1_TFBS_Ubx
2L	5965489	2L_5965489_SNP [dm3] 2L_5965489_SNP [dm6]	A	G	4.087e^-5	0.731	UTR_3_PRIME CG13992 UPSTREAM psd
X	21915306	X_21915306_SNP [dm3] X_22513470_SNP [dm6]	G	A	4.108e^-5	0.731	DOWNSTREAM CR43962 INTERGENIC	transposable element FlyBase
X	19213655	X_19213655_SNP [dm3] X_19319622_SNP [dm6]	G	A	4.120e^-5	0.731	INTRON out	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3L	19872325	3L_19872325_SNP [dm3] 3L_19879225_SNP [dm6]	C	T	4.124e^-5	0.731	SYNONYMOUS_CODING CG8334	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	26038832	3R_26038832_SNP [dm3] 3R_30213110_SNP [dm6]	T	G	4.195e^-5	0.731	DOWNSTREAM CecB & 1 other EXON Cec2
3R	2782332	3R_2782332_SNP [dm3] 3R_6956610_SNP [dm6]	G	T	4.204e^-5	0.731	INTRON Antp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	16738008	2R_16738008_SNP [dm3] 2R_20850503_SNP [dm6]	G	T	4.247e^-5	0.731	SYNONYMOUS_CODING CG9993 UPSTREAM CG17999	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	9714247	2L_9714247_SNP [dm3] 2L_9714247_SNP [dm6]	C	T	4.272e^-5	0.731	UTR_3_PRIME Nckx30C
3R	9965442	3R_9965442_SNP [dm3] 3R_14139720_SNP [dm6]	G	A	4.342e^-5	0.731	INTERGENIC
2R	16949572	2R_16949572_SNP [dm3] 2R_21062067_SNP [dm6]	A	G	4.417e^-5	0.731	SYNONYMOUS_CODING Cht8 DOWNSTREAM mRpL54	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	1395772	3L_1395772_SNP [dm3] 3L_1395772_SNP [dm6]	T	A	4.533e^-5	0.731	INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8736354	3L_8736354_DEL [dm3] 3L_8743254_DEL [dm6]	AA	A	4.698e^-5	0.731	INTRON Prm	TF binding site BDTNP1_TFBS_twi
3R	23875237	3R_23875237_SNP [dm3] 3R_28049515_SNP [dm6]	A	G	4.719e^-5	0.731	UTR_5_PRIME CG34362 INTRON CG34362
3R	13959624	3R_13959624_SNP [dm3] 3R_18133902_SNP [dm6]	G	A	4.778e^-5	0.731	UTR_3_PRIME sr DOWNSTREAM sr
2L	16097936	2L_16097936_SNP [dm3] 2L_16097936_SNP [dm6]	A	T	4.832e^-5	0.731	INTERGENIC
2L	16097937	2L_16097937_SNP [dm3] 2L_16097937_SNP [dm6]	A	T	4.832e^-5	0.731	INTERGENIC
3R	6711687	3R_6711687_SNP [dm3] 3R_10885965_SNP [dm6]	C	T	4.896e^-5	0.731	UTR_5_PRIME Leash UPSTREAM CG14696	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	15154379	X_15154379_SNP [dm3] X_15260346_SNP [dm6]	G	C	4.898e^-5	0.731	INTERGENIC
2R	16855303	2R_16855303_SNP [dm3] 2R_20967798_SNP [dm6]	G	A	4.952e^-5	0.731	INTERGENIC
2L	17006672	2L_17006672_SNP [dm3] 2L_17006672_SNP [dm6]	A	G	5.013e^-5	0.731	INTERGENIC
3L	4025783	3L_4025783_SNP [dm3] 3L_4025783_SNP [dm6]	T	A	5.030e^-5	0.731	UTR_5_PRIME CG11594 UPSTREAM CG11594 & 1 other INTRON CG11594
X	19372556	X_19372556_SNP [dm3] X_19478523_SNP [dm6]	T	G	5.113e^-5	0.731	SYNONYMOUS_CODING CG32533 DOWNSTREAM mRpS14	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
X	21207635	X_21207635_SNP [dm3] X_21336608_SNP [dm6]	C	G	5.166e^-5	0.731	INTRON tty
3R	18696243	3R_18696243_SNP [dm3] 3R_22870521_SNP [dm6]	C	T	5.211e^-5	0.731	INTERGENIC
3R	25070170	3R_25070170_SNP [dm3] 3R_29244448_SNP [dm6]	C	A	5.231e^-5	0.731	SPLICE_SITE_DONOR CG31445 DOWNSTREAM SP1029 INTRON CG31445
3R	18658047	3R_18658047_SNP [dm3] 3R_22832325_SNP [dm6]	G	A	5.378e^-5	0.731	INTERGENIC
2R	10011679	2R_10011679_SNP [dm3] 2R_14124174_SNP [dm6]	A	G	5.404e^-5	0.731	INTRON Prosap
3R	12733386	3R_12733386_SNP [dm3] 3R_16907664_SNP [dm6]	A	G	5.517e^-5	0.731	INTRON iab-8	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	4340696	2L_4340696_SNP [dm3] 2L_4340696_SNP [dm6]	T	C	5.520e^-5	0.731	INTRON Atet
3L	3783386	3L_3783386_SNP [dm3] 3L_3783386_SNP [dm6]	T	C	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	3783389	3L_3783389_SNP [dm3] 3L_3783389_SNP [dm6]	A	G	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	3784525	3L_3784525_SNP [dm3] 3L_3784525_SNP [dm6]	A	G	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	3784526	3L_3784526_SNP [dm3] 3L_3784526_SNP [dm6]	A	T	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	3784764	3L_3784764_SNP [dm3] 3L_3784764_SNP [dm6]	G	A	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	3785181	3L_3785181_SNP [dm3] 3L_3785181_SNP [dm6]	T	C	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_sens mE1_TFBS_Ubx
3L	3785928	3L_3785928_SNP [dm3] 3L_3785928_SNP [dm6]	C	T	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
3L	3785999	3L_3785999_SNP [dm3] 3L_3785999_SNP [dm6]	A	C	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
3L	3786830	3L_3786830_SNP [dm3] 3L_3786830_SNP [dm6]	A	G	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3L	3786853	3L_3786853_SNP [dm3] 3L_3786853_SNP [dm6]	C	A	5.648e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
X	12903927	X_12903927_SNP [dm3] X_13009894_SNP [dm6]	G	C	5.712e^-5	0.731	INTRON rad
2L	5489300	2L_5489300_SNP [dm3] 2L_5489300_SNP [dm6]	G	T	5.756e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_HSA
2R	10872291	2R_10872291_DEL [dm3] 2R_14984786_DEL [dm6]	TT	T	5.760e^-5	0.731	UPSTREAM tRNA:CR30241 INTRON pcs
2L	6820100	2L_6820100_SNP [dm3] 2L_6820100_SNP [dm6]	G	A	5.787e^-5	0.731	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_D
2L	2433307	2L_2433307_SNP [dm3] 2L_2433307_SNP [dm6]	T	C	5.855e^-5	0.731	INTRON dpp
2L	5489198	2L_5489198_SNP [dm3] 2L_5489198_SNP [dm6]	C	T	5.942e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd
3L	7946757	3L_7946757_SNP [dm3] 3L_7953657_SNP [dm6]	A	T	6.073e^-5	0.731	INTERGENIC	TF binding site mE1_TFBS_cad
3L	13165183	3L_13165183_SNP [dm3] 3L_13172083_SNP [dm6]	A	C	6.144e^-5	0.731	INTERGENIC
2R	10802816	2R_10802816_SNP [dm3] 2R_14915311_SNP [dm6]	T	C	6.151e^-5	0.731	INTRON CG10249
X	14474722	X_14474722_SNP [dm3] X_14580689_SNP [dm6]	C	A	6.198e^-5	0.731	UTR_5_PRIME CG14414 INTRON CG14414	TF binding site BDTNP1_TFBS_dl
3R	20524829	3R_20524829_SNP [dm3] 3R_24699107_SNP [dm6]	C	T	6.208e^-5	0.731	INTRON slo	TF binding site BDTNP1_TFBS_dl
2R	17413079	2R_17413079_SNP [dm3] 2R_21525574_SNP [dm6]	T	C	6.208e^-5	0.731	INTRON Egfr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	809889	X_809889_SNP [dm3] X_915856_SNP [dm6]	C	T	6.215e^-5	0.731	INTRON CG43867
3R	6458194	3R_6458194_SNP [dm3] 3R_10632472_SNP [dm6]	T	C	6.377e^-5	0.731	INTRON hth	TF binding site mE1_TFBS_cad
3R	25635522	3R_25635522_SNP [dm3] 3R_29809800_SNP [dm6]	C	T	6.379e^-5	0.731	SYNONYMOUS_CODING ca	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	3785150	3L_3785150_SNP [dm3] 3L_3785150_SNP [dm6]	A	C	6.380e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_sens
3L	2830201	3L_2830201_SNP [dm3] 3L_2830201_SNP [dm6]	A	T	6.403e^-5	0.731	INTRON CG43444
2R	17901349	2R_17901349_SNP [dm3] 2R_22013844_SNP [dm6]	T	A	6.419e^-5	0.731	INTRON CG34370
2L	1737968	2L_1737968_SNP [dm3] 2L_1737968_SNP [dm6]	A	T	6.436e^-5	0.731	UTR_5_PRIME CG17646 INTRON CG17646	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	4635521	2L_4635521_SNP [dm3] 2L_4635521_SNP [dm6]	A	C	6.509e^-5	0.731	INTERGENIC
X	16114794	X_16114794_SNP [dm3] X_16220761_SNP [dm6]	A	T	6.652e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	3788953	3L_3788953_SNP [dm3] 3L_3788953_SNP [dm6]	A	G	6.695e^-5	0.731	UPSTREAM CG32264 INTRON CG32264	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
3L	3788958	3L_3788958_SNP [dm3] 3L_3788958_SNP [dm6]	A	G	6.695e^-5	0.731	UPSTREAM CG32264 INTRON CG32264	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
3R	11824187	3R_11824187_SNP [dm3] 3R_15998465_SNP [dm6]	A	T	6.810e^-5	0.731	INTRON srp
X	14630806	X_14630806_SNP [dm3] X_14736773_SNP [dm6]	G	A	6.810e^-5	0.731	INTRON NetB	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	22463502	3R_22463502_SNP [dm3] 3R_26637780_SNP [dm6]	T	A	6.823e^-5	0.731	DOWNSTREAM TwdlS INTERGENIC
3L	13403711	3L_13403711_SNP [dm3] 3L_13410611_SNP [dm6]	T	C	6.938e^-5	0.731	DOWNSTREAM CG10222 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_bab1
3R	2020400	3R_2020400_SNP [dm3] 3R_6194678_SNP [dm6]	T	C	6.986e^-5	0.731	UTR_3_PRIME NPFR INTRON NPFR
2L	4628147	2L_4628147_SNP [dm3] 2L_4628147_SNP [dm6]	A	T	7.065e^-5	0.731	INTERGENIC
2L	2679897	2L_2679897_SNP [dm3] 2L_2679897_SNP [dm6]	A	G	7.111e^-5	0.731	INTRON CG31690
3L	1396305	3L_1396305_SNP [dm3] 3L_1396305_SNP [dm6]	C	A	7.117e^-5	0.731	INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8877767	3L_8877767_SNP [dm3] 3L_8884667_SNP [dm6]	A	G	7.181e^-5	0.731	INTRON dally
2R	10616733	2R_10616733_SNP [dm3] 2R_14729228_SNP [dm6]	T	C	7.333e^-5	0.731	INTERGENIC
3L	18061245	3L_18061245_SNP [dm3] 3L_18068145_SNP [dm6]	A	G	7.626e^-5	0.731	DOWNSTREAM CG44006 INTERGENIC
3R	19508127	3R_19508127_SNP [dm3] 3R_23682405_SNP [dm6]	T	C	7.660e^-5	0.731	UPSTREAM CG16710 DOWNSTREAM eIF-3p66 INTERGENIC	TF binding site mE1_TFBS_cad
2L	2059733	2L_2059733_DEL [dm3] 2L_2059733_DEL [dm6]	CC	C	7.664e^-5	0.731	UTR_3_PRIME dpr3
2L	2059765	2L_2059765_SNP [dm3] 2L_2059765_SNP [dm6]	A	G	7.664e^-5	0.731	UTR_3_PRIME dpr3
2L	2060601	2L_2060601_SNP [dm3] 2L_2060601_SNP [dm6]	G	A	7.664e^-5	0.731	INTRON dpr3
3L	3784077	3L_3784077_SNP [dm3] 3L_3784077_SNP [dm6]	C	G	7.710e^-5	0.731	INTRON CG32264	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	16905005	2L_16905005_SNP [dm3] 2L_16905005_SNP [dm6]	T	G	7.724e^-5	0.731	INTRON tweek
2L	11341972	2L_11341972_SNP [dm3] 2L_11341972_SNP [dm6]	A	C	7.825e^-5	0.731	DOWNSTREAM CG14926 INTERGENIC
2R	3863511	2R_3863511_SNP [dm3] 2R_7976006_SNP [dm6]	A	G	7.852e^-5	0.731	SYNONYMOUS_CODING ACC
2R	19577689	2R_19577689_SNP [dm3] 2R_23690166_SNP [dm6]	A	C	7.910e^-5	0.731	UTR_3_PRIME Pal2 DOWNSTREAM CG30183
2L	11200815	2L_11200815_SNP [dm3] 2L_11200815_SNP [dm6]	A	T	7.917e^-5	0.731	INTRON Ca-beta
X	21208600	X_21208600_SNP [dm3] X_21337573_SNP [dm6]	T	A	7.919e^-5	0.731	INTRON tty	TF binding site BDTNP1_TFBS_dl
2L	14634358	2L_14634358_SNP [dm3] 2L_14634358_SNP [dm6]	G	C	7.979e^-5	0.731	INTRON osp
3L	2714937	3L_2714937_SNP [dm3] 3L_2714937_SNP [dm6]	G	C	8.002e^-5	0.731	INTERGENIC
3R	23820896	3R_23820896_SNP [dm3] 3R_27995174_SNP [dm6]	T	A	8.003e^-5	0.731	INTERGENIC
3R	23824654	3R_23824654_SNP [dm3] 3R_27998932_SNP [dm6]	A	G	8.130e^-5	0.731	INTERGENIC
2L	4057176	2L_4057176_SNP [dm3] 2L_4057176_SNP [dm6]	T	C	8.201e^-5	0.731	INTRON ed	TF binding site BDTNP1_TFBS_dl
2L	4635509	2L_4635509_SNP [dm3] 2L_4635509_SNP [dm6]	C	A	8.293e^-5	0.731	INTERGENIC
X	21208406	X_21208406_SNP [dm3] X_21337379_SNP [dm6]	G	A	8.304e^-5	0.731	INTRON tty	TF binding site BDTNP1_TFBS_dl
X	21209759	X_21209759_SNP [dm3] X_21338732_SNP [dm6]	C	A	8.304e^-5	0.731	START_GAINED tty UTR_5_PRIME tty INTRON tty	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	3579235	2L_3579235_SNP [dm3] 2L_3579235_SNP [dm6]	A	T	8.357e^-5	0.731	SYNONYMOUS_CODING sob	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	16069467	2L_16069467_SNP [dm3] 2L_16069467_SNP [dm6]	T	G	8.370e^-5	0.731	INTRON beat-Ia
X	16050735	X_16050735_SNP [dm3] X_16156702_SNP [dm6]	C	T	8.422e^-5	0.731	INTERGENIC
3L	20283520	3L_20283520_SNP [dm3] 3L_20290420_SNP [dm6]	C	A	8.490e^-5	0.731	DOWNSTREAM CR43890 INTRON gogo
3L	971388	3L_971388_SNP [dm3] 3L_971388_SNP [dm6]	C	A	8.502e^-5	0.731	INTRON Glut1
3L	5023318	3L_5023318_SNP [dm3] 3L_5023318_SNP [dm6]	G	A	8.622e^-5	0.731	INTRON Con
3L	4025782	3L_4025782_SNP [dm3] 3L_4025782_SNP [dm6]	T	G	8.785e^-5	0.731	UTR_5_PRIME CG11594 UPSTREAM CG11594 & 1 other INTRON CG11594
2R	4442513	2R_4442513_SNP [dm3] 2R_8555008_SNP [dm6]	T	C	8.791e^-5	0.731	INTERGENIC
X	22065644	X_22065644_SNP [dm3] X_22663808_SNP [dm6]	G	A	8.817e^-5	0.731	INTRON CR44997
X	4988955	X_4988955_SNP [dm3] X_5094922_SNP [dm6]	A	T	8.845e^-5	0.731	INTRON rg & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	4221554	3L_4221554_SNP [dm3] 3L_4221554_SNP [dm6]	C	T	8.893e^-5	0.731	DOWNSTREAM CR32252 INTRON CG43367	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	15084789	X_15084789_SNP [dm3] X_15190756_SNP [dm6]	C	A	8.902e^-5	0.731	DOWNSTREAM CG43737 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	7648813	2R_7648813_SNP [dm3] 2R_11761308_SNP [dm6]	G	A	8.915e^-5	0.731	INTRON ths
3L	2714916	3L_2714916_SNP [dm3] 3L_2714916_SNP [dm6]	C	G	8.921e^-5	0.731	INTERGENIC
3L	5126955	3L_5126955_SNP [dm3] 3L_5133855_SNP [dm6]	G	T	8.921e^-5	0.731	UPSTREAM CG4603 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
X	14475348	X_14475348_SNP [dm3] X_14581315_SNP [dm6]	A	G	8.921e^-5	0.731	DOWNSTREAM mRpS25 INTRON CG14414	TF binding site BDTNP1_TFBS_dl
X	14475467	X_14475467_SNP [dm3] X_14581434_SNP [dm6]	A	C	8.921e^-5	0.731	DOWNSTREAM mRpS25 INTRON CG14414	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	15082833	X_15082833_SNP [dm3] X_15188800_SNP [dm6]	A	G	8.921e^-5	0.731	UTR_3_PRIME CG43737
X	15085605	X_15085605_SNP [dm3] X_15191572_SNP [dm6]	C	G	8.921e^-5	0.731	INTERGENIC
X	15086750	X_15086750_SNP [dm3] X_15192717_SNP [dm6]	C	T	8.921e^-5	0.731	INTERGENIC
X	15788549	X_15788549_SNP [dm3] X_15894516_SNP [dm6]	A	T	8.921e^-5	0.731	INTRON shi
X	15788569	X_15788569_SNP [dm3] X_15894536_SNP [dm6]	G	A	8.921e^-5	0.731	INTRON shi
X	16097533	X_16097533_SNP [dm3] X_16203500_SNP [dm6]	G	A	8.921e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Kr
X	16113421	X_16113421_SNP [dm3] X_16219388_SNP [dm6]	G	A	8.921e^-5	0.731	INTERGENIC
X	17227035	X_17227035_SNP [dm3] X_17333002_SNP [dm6]	G	T	8.921e^-5	0.731	INTERGENIC
2L	9141262	2L_9141262_SNP [dm3] 2L_9141262_SNP [dm6]	T	A	8.955e^-5	0.731	INTRON CG32982
2L	10217874	2L_10217874_SNP [dm3] 2L_10217874_SNP [dm6]	C	T	8.958e^-5	0.731	INTRON Npc1a	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	5643718	2L_5643718_SNP [dm3] 2L_5643718_SNP [dm6]	G	A	9.180e^-5	0.731	INTRON CG31646	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	19944816	3R_19944816_SNP [dm3] 3R_24119094_SNP [dm6]	C	A	9.313e^-5	0.731	INTRON Rootletin
2L	16097941	2L_16097941_SNP [dm3] 2L_16097941_SNP [dm6]	G	C	9.328e^-5	0.731	INTERGENIC
X	3095927	X_3095927_SNP [dm3] X_3201894_SNP [dm6]	T	C	9.370e^-5	0.731	INTRON dnc
X	16114791	X_16114791_SNP [dm3] X_16220758_SNP [dm6]	T	G	9.373e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	16114875	X_16114875_INS [dm3] X_16220842_INS [dm6]	G	GGTTGTATTTG...	9.373e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
X	16114885	X_16114885_SNP [dm3] X_16220852_SNP [dm6]	T	G	9.373e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
X	21210772	X_21210772_SNP [dm3] X_21339745_SNP [dm6]	C	T	9.385e^-5	0.731	UTR_5_PRIME fliI UPSTREAM tty	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
X	21210792	X_21210792_SNP [dm3] X_21339765_SNP [dm6]	T	C	9.385e^-5	0.731	UTR_5_PRIME fliI UPSTREAM tty	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
2L	18244837	2L_18244837_INS [dm3] 2L_18244837_INS [dm6]	C	CA	9.409e^-5	0.731	INTRON CG42750
3R	26038965	3R_26038965_SNP [dm3] 3R_30213243_SNP [dm6]	T	A	9.418e^-5	0.731	DOWNSTREAM CecB & 2 others INTERGENIC
3L	2173108	3L_2173108_SNP [dm3] 3L_2173108_SNP [dm6]	C	T	9.432e^-5	0.731	NON_SYNONYMOUS_CODING CG15820 UPSTREAM CR15821	TF binding site mE1_TFBS_cad
3R	23862218	3R_23862218_SNP [dm3] 3R_28036496_SNP [dm6]	G	A	9.566e^-5	0.731	INTRON CG34362
2R	19818644	2R_19818644_SNP [dm3] 2R_23931121_SNP [dm6]	T	C	9.614e^-5	0.731	SYNONYMOUS_CODING Ca-P60A	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	10890500	2R_10890500_SNP [dm3] 2R_15002995_SNP [dm6]	G	C	9.631e^-5	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
3R	23520343	3R_23520343_SNP [dm3] 3R_27694621_SNP [dm6]	A	G	9.652e^-5	0.731	UPSTREAM Acp98AB & 1 other DOWNSTREAM CG43319 INTERGENIC
3R	21187467	3R_21187467_SNP [dm3] 3R_25361745_SNP [dm6]	T	G	9.722e^-5	0.731	INTRON Fur1
2R	5606939	2R_5606939_SNP [dm3] 2R_9719434_SNP [dm6]	A	G	9.745e^-5	0.731	INTRON sqa
2R	3926082	2R_3926082_SNP [dm3] 2R_8038577_SNP [dm6]	C	T	9.784e^-5	0.731	INTRON Optix	regulatory region REDfly_CRMs
X	21207184	X_21207184_SNP [dm3] X_21336157_SNP [dm6]	C	T	9.846e^-5	0.731	SYNONYMOUS_CODING tty	TF binding site mE1_TFBS_chinmo
X	1835772	X_1835772_DEL [dm3] X_1941739_DEL [dm6]	TT	T	9.872e^-5	0.731	UPSTREAM Hr4 DOWNSTREAM CG3587 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	18061236	3L_18061236_SNP [dm3] 3L_18068136_SNP [dm6]	C	T	9.888e^-5	0.731	DOWNSTREAM CG44006 INTERGENIC
2L	1735820	2L_1735820_SNP [dm3] 2L_1735820_SNP [dm6]	T	C	9.956e^-5	0.731	INTRON CG17646
2L	10118380	2L_10118380_SNP [dm3] 2L_10118380_SNP [dm6]	T	A	1.001e^-4	0.731	INTRON CG44153 & 1 other
X	13063838	X_13063838_SNP [dm3] X_13169805_SNP [dm6]	G	A	1.005e^-4	0.731	INTRON CG34411
2L	669288	2L_669288_SNP [dm3] 2L_669288_SNP [dm6]	T	G	1.019e^-4	0.731	INTRON ds	TF binding site BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA
2L	8601592	2L_8601592_SNP [dm3] 2L_8601592_SNP [dm6]	C	A	1.020e^-4	0.731	INTRON Sema-1a
X	4988944	X_4988944_DEL [dm3] X_5094911_DEL [dm6]	AT	A	1.020e^-4	0.731	INTRON rg & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	19818104	2R_19818104_SNP [dm3] 2R_23930581_SNP [dm6]	A	G	1.021e^-4	0.731	SYNONYMOUS_CODING Ca-P60A	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	20922687	X_20922687_SNP [dm3] X_21051660_SNP [dm6]	T	A	1.032e^-4	0.731	UPSTREAM snoRNA:Me28S-U3344b DOWNSTREAM scaRNA:MeU2-C28 & 1 other INTRON CG1518	TF binding site mE1_TFBS_cad
X	14897412	X_14897412_SNP [dm3] X_15003379_SNP [dm6]	A	G	1.035e^-4	0.731	INTRON eag
3L	5062698	3L_5062698_SNP [dm3] 3L_5062698_SNP [dm6]	G	T	1.043e^-4	0.731	INTRON Con
X	3798326	X_3798326_SNP [dm3] X_3904293_SNP [dm6]	T	C	1.047e^-4	0.731	SYNONYMOUS_CODING CG42541
3R	12749971	3R_12749971_SNP [dm3] 3R_16924249_SNP [dm6]	T	G	1.060e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	5055873	3L_5055873_SNP [dm3] 3L_5055873_SNP [dm6]	C	T	1.066e^-4	0.731	INTRON Con
X	15306589	X_15306589_SNP [dm3] X_15412556_SNP [dm6]	C	T	1.067e^-4	0.731	INTRON Cngl
3R	21304005	3R_21304005_SNP [dm3] 3R_25478283_SNP [dm6]	T	C	1.068e^-4	0.731	SYNONYMOUS_CODING XNP DOWNSTREAM MED28	TF binding site mE1_TFBS_cad
X	15081810	X_15081810_INS [dm3] X_15187777_INS [dm6]	T	TT	1.068e^-4	0.731	UTR_3_PRIME CG43737
X	15085590	X_15085590_DEL [dm3] X_15191557_DEL [dm6]	TCCAGTT	T	1.068e^-4	0.731	INTERGENIC
X	16048758	X_16048758_SNP [dm3] X_16154725_SNP [dm6]	T	C	1.077e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
X	16050080	X_16050080_SNP [dm3] X_16156047_SNP [dm6]	T	C	1.077e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_sens
3L	2729343	3L_2729343_SNP [dm3] 3L_2729343_SNP [dm6]	G	C	1.080e^-4	0.731	NON_SYNONYMOUS_CODING Mrtf UTR_5_PRIME Mrtf	TF binding site mE1_TFBS_chinmo
X	19394283	X_19394283_SNP [dm3] X_19500250_SNP [dm6]	A	T	1.088e^-4	0.731	INTRON Pfrx & 1 other
3R	2746183	3R_2746183_SNP [dm3] 3R_6920461_SNP [dm6]	T	C	1.089e^-4	0.731	INTRON Antp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	16114631	X_16114631_SNP [dm3] X_16220598_SNP [dm6]	A	T	1.090e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	15085763	X_15085763_SNP [dm3] X_15191730_SNP [dm6]	A	G	1.096e^-4	0.731	INTERGENIC
2R	6074050	2R_6074050_SNP [dm3] 2R_10186545_SNP [dm6]	A	T	1.099e^-4	0.731	INTRON KCNQ
3L	5959947	3L_5959947_SNP [dm3] 3L_5966847_SNP [dm6]	A	G	1.101e^-4	0.731	DOWNSTREAM CG10479 INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
2L	18244829	2L_18244829_SNP [dm3] 2L_18244829_SNP [dm6]	A	T	1.109e^-4	0.731	INTRON CG42750
X	15073390	X_15073390_SNP [dm3] X_15179357_SNP [dm6]	C	T	1.110e^-4	0.731	NON_SYNONYMOUS_CODING CG43737	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	2623839	2L_2623839_SNP [dm3] 2L_2623839_SNP [dm6]	A	G	1.112e^-4	0.731	INTERGENIC
2R	6063679	2R_6063679_DEL [dm3] 2R_10176174_DEL [dm6]	TTTCCTGTTTTCCATTTCCC...	T	1.112e^-4	0.731	INTRON KCNQ
3L	18061294	3L_18061294_SNP [dm3] 3L_18068194_SNP [dm6]	C	G	1.114e^-4	0.731	DOWNSTREAM CG44006 INTERGENIC
2L	11896894	2L_11896894_SNP [dm3] 2L_11896894_SNP [dm6]	A	C	1.123e^-4	0.731	UPSTREAM Pde1c INTRON Pde1c
2R	16790177	2R_16790177_SNP [dm3] 2R_20902672_SNP [dm6]	A	T	1.125e^-4	0.731	INTRON otp	TF binding site BDTNP1_TFBS_dl
3L	2653200	3L_2653200_SNP [dm3] 3L_2653200_SNP [dm6]	C	T	1.130e^-4	0.731	UTR_5_PRIME CG42304 UTR_3_PRIME Snup UPSTREAM CG42304
2R	10616658	2R_10616658_SNP [dm3] 2R_14729153_SNP [dm6]	T	C	1.132e^-4	0.731	INTERGENIC
2L	19385513	2L_19385513_SNP [dm3] 2L_19385513_SNP [dm6]	A	T	1.136e^-4	0.731	INTRON fon
2L	19385515	2L_19385515_SNP [dm3] 2L_19385515_SNP [dm6]	C	T	1.136e^-4	0.731	INTRON fon
3R	17933664	3R_17933664_SNP [dm3] 3R_22107942_SNP [dm6]	C	T	1.142e^-4	0.731	INTRON CG5778	TF binding site BDTNP1_TFBS_dl
3L	5256380	3L_5256380_SNP [dm3] 3L_5263280_SNP [dm6]	G	T	1.148e^-4	0.731	INTRON shep
2L	4145922	2L_4145922_SNP [dm3] 2L_4145922_SNP [dm6]	A	C	1.150e^-4	0.731	INTERGENIC
2R	20504267	2R_20504267_SNP [dm3] 2R_24616744_SNP [dm6]	T	A	1.154e^-4	0.731	INTRON CG13594
3R	18208044	3R_18208044_SNP [dm3] 3R_22382322_SNP [dm6]	T	G	1.156e^-4	0.731	SPLICE_SITE_REGION CG43343 DOWNSTREAM CG43342 INTRON CG43343
3R	18208593	3R_18208593_SNP [dm3] 3R_22382871_SNP [dm6]	G	A	1.156e^-4	0.731	SYNONYMOUS_CODING CG43343 DOWNSTREAM CG43342	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	5606995	2R_5606995_SNP [dm3] 2R_9719490_SNP [dm6]	A	C	1.160e^-4	0.731	NON_SYNONYMOUS_CODING sqa
2R	18512529	2R_18512529_SNP [dm3] 2R_22625024_SNP [dm6]	T	C	1.162e^-4	0.731	INTRON CG33143
2L	16802940	2L_16802940_SNP [dm3] 2L_16802940_SNP [dm6]	A	G	1.168e^-4	0.731	SYNONYMOUS_CODING CG13280	TF binding site mE1_TFBS_chinmo
3L	3270319	3L_3270319_SNP [dm3] 3L_3270319_SNP [dm6]	C	A	1.170e^-4	0.731	UPSTREAM CG14960 INTERGENIC
3L	3270596	3L_3270596_SNP [dm3] 3L_3270596_SNP [dm6]	T	C	1.170e^-4	0.731	UPSTREAM CG14960 INTERGENIC
3L	3270647	3L_3270647_SNP [dm3] 3L_3270647_SNP [dm6]	G	T	1.170e^-4	0.731	UPSTREAM CG14960 INTERGENIC
3L	1437716	3L_1437716_SNP [dm3] 3L_1437716_SNP [dm6]	C	T	1.174e^-4	0.731	UTR_5_PRIME SA-2 INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl
3L	1177759	3L_1177759_SNP [dm3] 3L_1177759_SNP [dm6]	C	T	1.178e^-4	0.731	UPSTREAM bab2 INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2L	1736334	2L_1736334_SNP [dm3] 2L_1736334_SNP [dm6]	A	G	1.190e^-4	0.731	INTRON CG17646	TF binding site mE1_TFBS_Trl
2R	11404445	2R_11404445_SNP [dm3] 2R_15516940_SNP [dm6]	G	A	1.194e^-4	0.731	UTR_3_PRIME Khc-73 DOWNSTREAM Khc-73
2L	6160261	2L_6160261_SNP [dm3] 2L_6160261_SNP [dm6]	G	A	1.196e^-4	0.731	UPSTREAM CG13989 INTERGENIC
2L	12197020	2L_12197020_SNP [dm3] 2L_12197020_SNP [dm6]	A	C	1.197e^-4	0.731	INTRON aret	TF binding site mE1_TFBS_inv
X	2823940	X_2823940_SNP [dm3] X_2929907_SNP [dm6]	A	C	1.198e^-4	0.731	UTR_5_PRIME CG32793 INTRON kirre
2L	9948788	2L_9948788_SNP [dm3] 2L_9948788_SNP [dm6]	A	G	1.198e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_inv
3L	3866463	3L_3866463_SNP [dm3] 3L_3866463_SNP [dm6]	A	T	1.204e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	9541155	3L_9541155_SNP [dm3] 3L_9548055_SNP [dm6]	A	T	1.205e^-4	0.731	INTRON CG42673
X	17238071	X_17238071_SNP [dm3] X_17344038_SNP [dm6]	G	T	1.208e^-4	0.731	INTERGENIC
2R	3773841	2R_3773841_SNP [dm3] 2R_7886336_SNP [dm6]	C	G	1.212e^-4	0.731	UPSTREAM Dgk INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2L	5628184	2L_5628184_SNP [dm3] 2L_5628184_SNP [dm6]	C	T	1.213e^-4	0.731	INTRON CG31646
2L	5628244	2L_5628244_DEL [dm3] 2L_5628244_DEL [dm6]	CCATAGTTACC...	T	1.213e^-4	0.731	INTRON CG31646	TF binding site BDTNP1_TFBS_twi
2L	5628259	2L_5628259_DEL [dm3] 2L_5628259_DEL [dm6]	ATAACCATCCTTTCATCGGA...	A	1.213e^-4	0.731	INTRON CG31646	TF binding site BDTNP1_TFBS_twi
X	16740306	X_16740306_SNP [dm3] X_16846273_SNP [dm6]	T	C	1.215e^-4	0.731	SYNONYMOUS_CODING CG13003	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	1400192	3L_1400192_MNP [dm3] 3L_1400192_MNP [dm6]	ACA	CTT	1.215e^-4	0.731	INTRON Ptp61F & 1 other
2L	10118396	2L_10118396_SNP [dm3] 2L_10118396_SNP [dm6]	A	T	1.216e^-4	0.731	INTRON CG44153 & 1 other
3R	19174341	3R_19174341_SNP [dm3] 3R_23348619_SNP [dm6]	A	G	1.222e^-4	0.731	SYNONYMOUS_CODING DNApol-epsilon	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
3L	21859851	3L_21859851_SNP [dm3] 3L_21866751_SNP [dm6]	A	C	1.227e^-4	0.731	INTRON mub	TF binding site BDTNP1_TFBS_twi
3L	5023302	3L_5023302_SNP [dm3] 3L_5023302_SNP [dm6]	T	G	1.227e^-4	0.731	INTRON Con
3L	5023303	3L_5023303_SNP [dm3] 3L_5023303_SNP [dm6]	T	A	1.227e^-4	0.731	INTRON Con
3R	21278778	3R_21278778_SNP [dm3] 3R_25453056_SNP [dm6]	G	T	1.229e^-4	0.731	INTRON Fur1
2R	10616788	2R_10616788_SNP [dm3] 2R_14729283_SNP [dm6]	T	A	1.244e^-4	0.731	INTERGENIC
2R	10616796	2R_10616796_SNP [dm3] 2R_14729291_SNP [dm6]	C	A	1.244e^-4	0.731	INTERGENIC
2R	18512490	2R_18512490_SNP [dm3] 2R_22624985_SNP [dm6]	T	A	1.248e^-4	0.731	INTRON CG33143
2R	11721680	2R_11721680_SNP [dm3] 2R_15834175_SNP [dm6]	C	T	1.252e^-4	0.731	INTRON tun & 1 other	regulatory region REDfly_CRMs
3L	2744623	3L_2744623_SNP [dm3] 3L_2744623_SNP [dm6]	C	T	1.253e^-4	0.731	INTRON Mrtf
3R	23526007	3R_23526007_SNP [dm3] 3R_27700285_SNP [dm6]	C	T	1.258e^-4	0.731	UPSTREAM btz & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
3R	25609102	3R_25609102_SNP [dm3] 3R_29783380_SNP [dm6]	T	C	1.258e^-4	0.731	INTRON kay	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
2R	14933385	2R_14933385_SNP [dm3] 2R_19045880_SNP [dm6]	C	T	1.275e^-4	0.731	INTERGENIC
X	5472131	X_5472131_SNP [dm3] X_5578098_SNP [dm6]	C	T	1.280e^-4	0.731	INTERGENIC
X	5472153	X_5472153_SNP [dm3] X_5578120_SNP [dm6]	C	A	1.280e^-4	0.731	INTERGENIC
3L	3995096	3L_3995096_DEL [dm3] 3L_3995096_DEL [dm6]	AA	A	1.287e^-4	0.731	INTERGENIC
X	16449747	X_16449747_SNP [dm3] X_16555714_SNP [dm6]	G	A	1.290e^-4	0.731	UTR_3_PRIME Pp2B-14D	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
3R	22463478	3R_22463478_INS [dm3] 3R_26637756_INS [dm6]	T	TTTCA	1.301e^-4	0.731	DOWNSTREAM TwdlS INTERGENIC
3R	22463417	3R_22463417_DEL [dm3] 3R_26637695_DEL [dm6]	TTAGAAGC	T	1.304e^-4	0.731	DOWNSTREAM TwdlS INTERGENIC
2R	19523410	2R_19523410_SNP [dm3] 2R_23635887_SNP [dm6]	A	C	1.306e^-4	0.731	INTRON retn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2R	10881414	2R_10881414_SNP [dm3] 2R_14993909_SNP [dm6]	C	G	1.309e^-4	0.731	UPSTREAM CR43830 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	19303926	2R_19303926_SNP [dm3] 2R_23416403_SNP [dm6]	A	G	1.316e^-4	0.731	SYNONYMOUS_CODING CG30411 INTRON CG9812	TF binding site BDTNP1_TFBS_sna mE1_TFBS_HSA
X	16114591	X_16114591_SNP [dm3] X_16220558_SNP [dm6]	C	T	1.318e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	14634380	2L_14634380_SNP [dm3] 2L_14634380_SNP [dm6]	C	T	1.331e^-4	0.731	INTRON osp
3R	6458367	3R_6458367_SNP [dm3] 3R_10632645_SNP [dm6]	G	A	1.333e^-4	0.731	INTRON hth	TF binding site mE1_TFBS_cad
3R	18680245	3R_18680245_INS [dm3] 3R_22854523_INS [dm6]	T	TCT	1.341e^-4	0.731	INTERGENIC
2L	16315385	2L_16315385_SNP [dm3] 2L_16315385_SNP [dm6]	G	A	1.343e^-4	0.731	INTRON cact	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	22524195	3R_22524195_SNP [dm3] 3R_26698473_SNP [dm6]	C	G	1.350e^-4	0.731	UTR_3_PRIME amon
3R	19324804	3R_19324804_DEL [dm3] 3R_23499082_DEL [dm6]	CCCAATGC	C	1.354e^-4	0.731	INTERGENIC
2L	5965449	2L_5965449_SNP [dm3] 2L_5965449_SNP [dm6]	A	G	1.354e^-4	0.731	UTR_3_PRIME CG13992 UPSTREAM psd
3R	21296988	3R_21296988_SNP [dm3] 3R_25471266_SNP [dm6]	G	C	1.374e^-4	0.731	INTRON Fur1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	21298902	3R_21298902_SNP [dm3] 3R_25473180_SNP [dm6]	A	G	1.374e^-4	0.731	UPSTREAM Vps33B & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3R	21298931	3R_21298931_SNP [dm3] 3R_25473209_SNP [dm6]	A	G	1.374e^-4	0.731	UPSTREAM Vps33B & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3R	21300307	3R_21300307_SNP [dm3] 3R_25474585_SNP [dm6]	C	T	1.374e^-4	0.731	SYNONYMOUS_CODING Vps33B
3R	21301090	3R_21301090_SNP [dm3] 3R_25475368_SNP [dm6]	A	T	1.374e^-4	0.731	SYNONYMOUS_CODING Vps33B DOWNSTREAM CG4553	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	21301168	3R_21301168_SNP [dm3] 3R_25475446_SNP [dm6]	G	C	1.374e^-4	0.731	NON_SYNONYMOUS_CODING Vps33B DOWNSTREAM CG4553	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	21301171	3R_21301171_SNP [dm3] 3R_25475449_SNP [dm6]	C	T	1.374e^-4	0.731	SYNONYMOUS_CODING Vps33B DOWNSTREAM CG4553	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	20084119	3L_20084119_SNP [dm3] 3L_20091019_SNP [dm6]	C	A	1.384e^-4	0.731	INTERGENIC
X	14896967	X_14896967_SNP [dm3] X_15002934_SNP [dm6]	G	A	1.384e^-4	0.731	INTRON eag
3R	22463461	3R_22463461_SNP [dm3] 3R_26637739_SNP [dm6]	C	A	1.385e^-4	0.731	DOWNSTREAM TwdlS INTERGENIC
2L	10487772	2L_10487772_SNP [dm3] 2L_10487772_SNP [dm6]	G	A	1.388e^-4	0.731	SYNONYMOUS_CODING CG7456 UPSTREAM CG6144	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	26054796	3R_26054796_SNP [dm3] 3R_30229074_SNP [dm6]	G	C	1.388e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2R	3722688	2R_3722688_SNP [dm3] 2R_7835183_SNP [dm6]	A	T	1.408e^-4	0.731	UTR_3_PRIME Atg10 & 1 other
2R	19569854	2R_19569854_SNP [dm3] 2R_23682331_SNP [dm6]	T	C	1.410e^-4	0.731	SYNONYMOUS_CODING St1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	19813907	2R_19813907_SNP [dm3] 2R_23926384_SNP [dm6]	T	C	1.412e^-4	0.731	SYNONYMOUS_CODING CG2812 UTR_3_PRIME Ca-P60A DOWNSTREAM Ca-P60A	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	11308760	X_11308760_SNP [dm3] X_11414727_SNP [dm6]	G	A	1.416e^-4	0.731	SYNONYMOUS_CODING Gr10a DOWNSTREAM Or10a	TF binding site BDTNP1_TFBS_da
2L	10065827	2L_10065827_SNP [dm3] 2L_10065827_SNP [dm6]	G	A	1.424e^-4	0.731	NON_SYNONYMOUS_CODING CG44153	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	23820893	3R_23820893_SNP [dm3] 3R_27995171_SNP [dm6]	T	A	1.425e^-4	0.731	INTERGENIC
2L	9949672	2L_9949672_SNP [dm3] 2L_9949672_SNP [dm6]	A	C	1.427e^-4	0.731	DOWNSTREAM mir-87 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	13637972	X_13637972_INS [dm3] X_13743939_INS [dm6]	A	ACTTTGTATGCTGTTTGGCA...	1.434e^-4	0.731	UPSTREAM CR42861 INTRON Grip91	TF binding site BDTNP1_TFBS_dl
X	13637981	X_13637981_SNP [dm3] X_13743948_SNP [dm6]	A	G	1.434e^-4	0.731	UPSTREAM CR42861 INTRON Grip91	TF binding site BDTNP1_TFBS_dl
2L	10315086	2L_10315086_SNP [dm3] 2L_10315086_SNP [dm6]	T	A	1.440e^-4	0.731	UPSTREAM CG5384 INTRON CG4972	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx mE1_TFBS_zfh1
2L	10315334	2L_10315334_SNP [dm3] 2L_10315334_SNP [dm6]	C	A	1.440e^-4	0.731	UPSTREAM CG5384 INTRON CG4972	TF binding site BDTNP1_TFBS_dl mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_zfh1
3L	5726080	3L_5726080_SNP [dm3] 3L_5732980_SNP [dm6]	C	G	1.448e^-4	0.731	INTRON sif
3L	2202884	3L_2202884_SNP [dm3] 3L_2202884_SNP [dm6]	C	T	1.450e^-4	0.731	INTERGENIC
2R	13754223	2R_13754223_SNP [dm3] 2R_17866718_SNP [dm6]	A	T	1.459e^-4	0.731	UTR_3_PRIME Mapmodulin UPSTREAM thr DOWNSTREAM Mapmodulin	TF binding site mE1_TFBS_sens
3R	3449951	3R_3449951_SNP [dm3] 3R_7624229_SNP [dm6]	C	T	1.476e^-4	0.731	INTRON CG34127
3L	3915110	3L_3915110_SNP [dm3] 3L_3915110_SNP [dm6]	T	A	1.479e^-4	0.731	INTRON Eip63F-1
3R	20281667	3R_20281667_SNP [dm3] 3R_24455945_SNP [dm6]	T	G	1.480e^-4	0.731	INTRON nAChRalpha1
2L	20949443	2L_20949443_SNP [dm3] 2L_20949443_SNP [dm6]	T	C	1.480e^-4	0.731	INTERGENIC
3L	4221583	3L_4221583_SNP [dm3] 3L_4221583_SNP [dm6]	A	G	1.482e^-4	0.731	DOWNSTREAM CR32252 INTRON CG43367	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	16917322	2L_16917322_SNP [dm3] 2L_16917322_SNP [dm6]	C	T	1.491e^-4	0.731	DOWNSTREAM tweek INTERGENIC
3R	21313785	3R_21313785_SNP [dm3] 3R_25488063_SNP [dm6]	T	G	1.495e^-4	0.731	SYNONYMOUS_CODING Dhap-at	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	5070837	3L_5070837_SNP [dm3] 3L_5070837_SNP [dm6]	C	A	1.496e^-4	0.731	INTRON Con
X	20924522	X_20924522_SNP [dm3] X_21053495_SNP [dm6]	T	C	1.498e^-4	0.731	UPSTREAM bves INTRON CG1518	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3L	4994181	3L_4994181_SNP [dm3] 3L_4994181_SNP [dm6]	G	A	1.509e^-4	0.731	SYNONYMOUS_CODING CG32232 INTRON Con	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	20628372	2R_20628372_SNP [dm3] 2R_24740849_SNP [dm6]	G	A	1.512e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	10802798	2R_10802798_SNP [dm3] 2R_14915293_SNP [dm6]	C	A	1.520e^-4	0.731	INTRON CG10249
2L	13251292	2L_13251292_SNP [dm3] 2L_13251292_SNP [dm6]	C	T	1.521e^-4	0.731	UPSTREAM CG31728 INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	4988943	X_4988943_SNP [dm3] X_5094910_SNP [dm6]	C	A	1.538e^-4	0.731	INTRON rg & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	25504010	3R_25504010_SNP [dm3] 3R_29678288_SNP [dm6]	T	C	1.539e^-4	0.731	SYNONYMOUS_CODING Cap-D2	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	22463426	3R_22463426_SNP [dm3] 3R_26637704_SNP [dm6]	G	T	1.547e^-4	0.731	DOWNSTREAM TwdlS INTERGENIC
3R	22463427	3R_22463427_SNP [dm3] 3R_26637705_SNP [dm6]	A	C	1.547e^-4	0.731	DOWNSTREAM TwdlS INTERGENIC
3R	22463449	3R_22463449_SNP [dm3] 3R_26637727_SNP [dm6]	G	T	1.547e^-4	0.731	DOWNSTREAM TwdlS INTERGENIC
X	19371767	X_19371767_SNP [dm3] X_19477734_SNP [dm6]	T	C	1.551e^-4	0.731	SYNONYMOUS_CODING CG32533	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	6458978	3R_6458978_SNP [dm3] 3R_10633256_SNP [dm6]	T	C	1.554e^-4	0.731	INTRON hth	TF binding site mE1_TFBS_chinmo
2R	3865473	2R_3865473_SNP [dm3] 2R_7977968_SNP [dm6]	C	T	1.554e^-4	0.731	SYNONYMOUS_CODING ACC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	1737926	2L_1737926_SNP [dm3] 2L_1737926_SNP [dm6]	G	A	1.554e^-4	0.731	UTR_5_PRIME CG17646 INTRON CG17646	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	23872756	3R_23872756_SNP [dm3] 3R_28047034_SNP [dm6]	G	T	1.555e^-4	0.731	UPSTREAM CG34362 INTRON CG34362
3R	23526000	3R_23526000_SNP [dm3] 3R_27700278_SNP [dm6]	A	G	1.557e^-4	0.731	UPSTREAM btz & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
X	3741039	X_3741039_SNP [dm3] X_3847006_SNP [dm6]	A	C	1.562e^-4	0.731	INTRON ec	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	25595048	3R_25595048_SNP [dm3] 3R_29769326_SNP [dm6]	C	G	1.573e^-4	0.731	INTRON kay
X	669021	X_669021_SNP [dm3] X_774988_SNP [dm6]	T	A	1.588e^-4	0.731	INTRON fz3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3R	24704635	3R_24704635_SNP [dm3] 3R_28878913_SNP [dm6]	C	G	1.588e^-4	0.731	NON_SYNONYMOUS_CODING CG14523 INTRON CG33203	TF binding site mE1_TFBS_cad
3L	3079251	3L_3079251_SNP [dm3] 3L_3079251_SNP [dm6]	C	T	1.618e^-4	0.731	INTRON CG11486
2L	669411	2L_669411_SNP [dm3] 2L_669411_SNP [dm6]	C	T	1.628e^-4	0.731	INTRON ds	TF binding site BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA
2L	19485185	2L_19485185_SNP [dm3] 2L_19485185_SNP [dm6]	G	T	1.631e^-4	0.731	SYNONYMOUS_CODING CG13084 UPSTREAM CG10195	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	17732353	3R_17732353_SNP [dm3] 3R_21906631_SNP [dm6]	A	G	1.638e^-4	0.731	UTR_3_PRIME CG6678
3L	5053262	3L_5053262_SNP [dm3] 3L_5053262_SNP [dm6]	G	A	1.639e^-4	0.731	INTRON Con
3L	3800445	3L_3800445_SNP [dm3] 3L_3800445_SNP [dm6]	C	T	1.645e^-4	0.731	SYNONYMOUS_CODING CG32264 INTRON CG32264	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	3204455	3L_3204455_SNP [dm3] 3L_3204455_SNP [dm6]	T	A	1.653e^-4	0.731	UPSTREAM CG33159 DOWNSTREAM CG32277 INTRON gry	TF binding site mE1_TFBS_cad
2R	11509495	2R_11509495_DEL [dm3] 2R_15621990_DEL [dm6]	CC	C	1.659e^-4	0.731	INTRON CG42524	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3R	24273819	3R_24273819_SNP [dm3] 3R_28448097_SNP [dm6]	G	A	1.667e^-4	0.731	INTRON beat-VI
2R	3865050	2R_3865050_SNP [dm3] 2R_7977545_SNP [dm6]	A	C	1.671e^-4	0.731	SYNONYMOUS_CODING ACC	TF binding site mE1_TFBS_cad
2L	11658027	2L_11658027_SNP [dm3] 2L_11658027_SNP [dm6]	G	A	1.671e^-4	0.731	DOWNSTREAM CG43167 INTERGENIC
2R	3867405	2R_3867405_SNP [dm3] 2R_7979900_SNP [dm6]	T	A	1.681e^-4	0.731	SYNONYMOUS_CODING ACC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	16798458	2L_16798458_INS [dm3] 2L_16798458_INS [dm6]	T	TGAT	1.681e^-4	0.731	UPSTREAM Ugt36Bc DOWNSTREAM Ugt36Bb INTERGENIC
2R	12573681	2R_12573681_SNP [dm3] 2R_16686176_SNP [dm6]	C	T	1.685e^-4	0.731	INTRON CG30463
3R	19571032	3R_19571032_SNP [dm3] 3R_23745310_SNP [dm6]	A	T	1.686e^-4	0.731	INTRON Hmgcr
2L	18578512	2L_18578512_SNP [dm3] 2L_18578512_SNP [dm6]	A	T	1.698e^-4	0.731	INTRON Pde11
3R	12142994	3R_12142994_DEL [dm3] 3R_16317272_DEL [dm6]	ACCTCAA	A	1.703e^-4	0.731	INTRON Sulf1
X	13637950	X_13637950_SNP [dm3] X_13743917_SNP [dm6]	A	T	1.708e^-4	0.731	INTRON Grip91	TF binding site BDTNP1_TFBS_dl
2L	5256095	2L_5256095_SNP [dm3] 2L_5256095_SNP [dm6]	C	A	1.712e^-4	0.731	INTRON tkv	TF binding site mE1_TFBS_cad
X	13638015	X_13638015_SNP [dm3] X_13743982_SNP [dm6]	G	C	1.726e^-4	0.731	UPSTREAM CR42861 INTRON Grip91	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd
X	13638018	X_13638018_SNP [dm3] X_13743985_SNP [dm6]	T	C	1.726e^-4	0.731	UPSTREAM CR42861 INTRON Grip91	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2L	8324586	2L_8324586_SNP [dm3] 2L_8324586_SNP [dm6]	C	T	1.728e^-4	0.731	INTRON CG7781
2L	16917319	2L_16917319_SNP [dm3] 2L_16917319_SNP [dm6]	A	T	1.729e^-4	0.731	DOWNSTREAM tweek INTERGENIC
2L	15142104	2L_15142104_SNP [dm3] 2L_15142104_SNP [dm6]	T	G	1.730e^-4	0.731	INTERGENIC
X	19453462	X_19453462_SNP [dm3] X_19559429_SNP [dm6]	G	A	1.734e^-4	0.731	DOWNSTREAM Grip84 & 4 others INTERGENIC
X	19453483	X_19453483_SNP [dm3] X_19559450_SNP [dm6]	G	A	1.734e^-4	0.731	UTR_3_PRIME Grip84 DOWNSTREAM mir-4966 & 3 others
3R	19225579	3R_19225579_SNP [dm3] 3R_23399857_SNP [dm6]	A	T	1.737e^-4	0.731	UPSTREAM CR44323 INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	21296801	3R_21296801_SNP [dm3] 3R_25471079_SNP [dm6]	A	G	1.740e^-4	0.731	INTRON Fur1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	10164692	2R_10164692_SNP [dm3] 2R_14277187_SNP [dm6]	C	G	1.743e^-4	0.731	UTR_5_PRIME Ih INTRON Ih
3L	2790464	3L_2790464_SNP [dm3] 3L_2790464_SNP [dm6]	T	G	1.762e^-4	0.731	SYNONYMOUS_CODING CG43444	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	26039010	3R_26039010_SNP [dm3] 3R_30213288_SNP [dm6]	G	A	1.769e^-4	0.731	DOWNSTREAM CecB & 2 others INTERGENIC
3R	26039017	3R_26039017_SNP [dm3] 3R_30213295_SNP [dm6]	T	C	1.769e^-4	0.731	DOWNSTREAM CecB & 2 others INTERGENIC
3R	26039021	3R_26039021_SNP [dm3] 3R_30213299_SNP [dm6]	T	A	1.769e^-4	0.731	DOWNSTREAM CecB & 2 others INTERGENIC
X	14760919	X_14760919_SNP [dm3] X_14866886_SNP [dm6]	T	A	1.771e^-4	0.731	INTRON Flo2 & 1 other
X	15473899	X_15473899_SNP [dm3] X_15579866_SNP [dm6]	C	G	1.775e^-4	0.731	DOWNSTREAM CG7872 INTERGENIC
2L	6500515	2L_6500515_INS [dm3] 2L_6500515_INS [dm6]	A	AG	1.777e^-4	0.731	INTRON CG31637
2L	1734976	2L_1734976_SNP [dm3] 2L_1734976_SNP [dm6]	A	G	1.779e^-4	0.731	INTRON CG17646
2L	18248517	2L_18248517_SNP [dm3] 2L_18248517_SNP [dm6]	T	C	1.780e^-4	0.731	INTRON CG42750
2R	7277041	2R_7277041_SNP [dm3] 2R_11389536_SNP [dm6]	A	G	1.800e^-4	0.731	UPSTREAM CG30022 INTRON sprt
2R	7277045	2R_7277045_SNP [dm3] 2R_11389540_SNP [dm6]	C	G	1.800e^-4	0.731	UPSTREAM CG30022 INTRON sprt
3L	4142357	3L_4142357_SNP [dm3] 3L_4142357_SNP [dm6]	C	A	1.805e^-4	0.731	UPSTREAM CG32260 DOWNSTREAM Ras64B & 1 other INTERGENIC
X	21213920	X_21213920_SNP [dm3] X_21342893_SNP [dm6]	C	T	1.810e^-4	0.731	NON_SYNONYMOUS_CODING fliI	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	22766178	3R_22766178_INS [dm3] 3R_26940456_INS [dm6]	G	GTG	1.812e^-4	0.731	INTRON sda
2R	7649482	2R_7649482_SNP [dm3] 2R_11761977_SNP [dm6]	C	A	1.814e^-4	0.731	INTRON ths
3R	12071692	3R_12071692_SNP [dm3] 3R_16245970_SNP [dm6]	C	T	1.829e^-4	0.731	INTRON tara	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	18578516	2L_18578516_DEL [dm3] 2L_18578516_DEL [dm6]	TGAAAATGTGGCTGT...	T	1.836e^-4	0.731	INTRON Pde11
2L	18578532	2L_18578532_DEL [dm3] 2L_18578532_DEL [dm6]	TC	T	1.836e^-4	0.731	INTRON Pde11
2R	8983460	2R_8983460_SNP [dm3] 2R_13095955_SNP [dm6]	T	A	1.842e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_inv
X	19927374	X_19927374_SNP [dm3] X_20033341_SNP [dm6]	A	T	1.843e^-4	0.731	INTRON Dop2R
3L	5256476	3L_5256476_SNP [dm3] 3L_5263376_SNP [dm6]	T	G	1.846e^-4	0.731	INTRON shep
2L	13252652	2L_13252652_SNP [dm3] 2L_13252652_SNP [dm6]	C	T	1.852e^-4	0.731	INTRON CG31728
2L	8326689	2L_8326689_SNP [dm3] 2L_8326689_SNP [dm6]	C	T	1.855e^-4	0.731	UPSTREAM CG14275 INTERGENIC
X	20922652	X_20922652_SNP [dm3] X_21051625_SNP [dm6]	A	G	1.871e^-4	0.731	UPSTREAM snoRNA:Me28S-U3344b DOWNSTREAM scaRNA:MeU2-C28 & 1 other INTRON CG1518	TF binding site mE1_TFBS_cad
2L	9176552	2L_9176552_SNP [dm3] 2L_9176552_SNP [dm6]	G	A	1.871e^-4	0.731	INTRON tai	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	5023311	3L_5023311_SNP [dm3] 3L_5023311_SNP [dm6]	A	C	1.875e^-4	0.731	INTRON Con
3L	971387	3L_971387_SNP [dm3] 3L_971387_SNP [dm6]	C	A	1.878e^-4	0.731	INTRON Glut1
3R	19225525	3R_19225525_SNP [dm3] 3R_23399803_SNP [dm6]	A	C	1.885e^-4	0.731	UPSTREAM CR44323 INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10616672	2R_10616672_SNP [dm3] 2R_14729167_SNP [dm6]	T	A	1.889e^-4	0.731	INTERGENIC
X	14897401	X_14897401_SNP [dm3] X_15003368_SNP [dm6]	A	T	1.892e^-4	0.731	INTRON eag
3R	23825186	3R_23825186_SNP [dm3] 3R_27999464_SNP [dm6]	A	T	1.897e^-4	0.731	INTERGENIC
2L	3270681	2L_3270681_SNP [dm3] 2L_3270681_SNP [dm6]	A	C	1.899e^-4	0.731	SYNONYMOUS_CODING CG3347	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	16114579	X_16114579_INS [dm3] X_16220546_INS [dm6]	T	TATAAAT	1.899e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_twi
2L	4329060	2L_4329060_SNP [dm3] 2L_4329060_SNP [dm6]	T	C	1.904e^-4	0.731	SYNONYMOUS_CODING CG16857	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	16046288	X_16046288_SNP [dm3] X_16152255_SNP [dm6]	G	A	1.910e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
X	16046290	X_16046290_SNP [dm3] X_16152257_SNP [dm6]	T	G	1.910e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
X	16046291	X_16046291_SNP [dm3] X_16152258_SNP [dm6]	G	T	1.910e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
X	16046313	X_16046313_SNP [dm3] X_16152280_SNP [dm6]	A	G	1.910e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_sens
3L	4363138	3L_4363138_SNP [dm3] 3L_4363138_SNP [dm6]	T	A	1.915e^-4	0.731	INTRON Cip4	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	1270397	2L_1270397_SNP [dm3] 2L_1270397_SNP [dm6]	G	T	1.918e^-4	0.731	INTRON robo3
2R	7649538	2R_7649538_SNP [dm3] 2R_11762033_SNP [dm6]	G	A	1.924e^-4	0.731	INTRON ths
3R	2676621	3R_2676621_SNP [dm3] 3R_6850899_SNP [dm6]	T	A	1.927e^-4	0.731	UPSTREAM Scr INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
3L	17054238	3L_17054238_SNP [dm3] 3L_17061138_SNP [dm6]	T	G	1.928e^-4	0.731	UTR_3_PRIME Rbp6
3L	4141896	3L_4141896_SNP [dm3] 3L_4141896_SNP [dm6]	A	G	1.938e^-4	0.731	UTR_3_PRIME Akh UPSTREAM CG32260 DOWNSTREAM Ras64B
X	12999825	X_12999825_SNP [dm3] X_13105792_SNP [dm6]	T	A	1.938e^-4	0.731	INTRON CG43313
3L	4143236	3L_4143236_SNP [dm3] 3L_4143236_SNP [dm6]	T	G	1.939e^-4	0.731	SYNONYMOUS_CODING CG32260 INTRON CG32260
3L	1177774	3L_1177774_SNP [dm3] 3L_1177774_SNP [dm6]	C	T	1.954e^-4	0.731	UPSTREAM bab2 INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	4151140	3L_4151140_SNP [dm3] 3L_4151140_SNP [dm6]	T	C	1.955e^-4	0.731	INTRON CG1299	TF binding site mE1_TFBS_cad
2L	8601599	2L_8601599_SNP [dm3] 2L_8601599_SNP [dm6]	C	A	1.956e^-4	0.731	INTRON Sema-1a
X	14899078	X_14899078_SNP [dm3] X_15005045_SNP [dm6]	G	C	1.957e^-4	0.731	SYNONYMOUS_CODING eag	TF binding site BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5965552	2L_5965552_SNP [dm3] 2L_5965552_SNP [dm6]	A	G	1.960e^-4	0.731	SYNONYMOUS_CODING CG13992 UPSTREAM psd
2R	10881660	2R_10881660_SNP [dm3] 2R_14994155_SNP [dm6]	G	A	1.964e^-4	0.731	UPSTREAM CR43830 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_Med
3L	5023328	3L_5023328_SNP [dm3] 3L_5023328_SNP [dm6]	G	A	1.969e^-4	0.731	INTRON Con
3R	9828904	3R_9828904_SNP [dm3] 3R_14003182_SNP [dm6]	G	T	1.972e^-4	0.731	INTRON rdx
X	20114987	X_20114987_SNP [dm3] X_20243913_SNP [dm6]	A	T	1.972e^-4	0.731	UPSTREAM Peritrophin-A DOWNSTREAM obst-A INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_ttk mE1_TFBS_Ubx
X	20824286	X_20824286_SNP [dm3] X_20953259_SNP [dm6]	C	A	1.983e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_HSA
2L	9141320	2L_9141320_INS [dm3] 2L_9141320_INS [dm6]	T	TAT	1.991e^-4	0.731	INTRON CG32982
3L	3077031	3L_3077031_SNP [dm3] 3L_3077031_SNP [dm6]	G	T	1.996e^-4	0.731	UPSTREAM CG11486 INTRON CG11486	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
X	5351083	X_5351083_SNP [dm3] X_5457050_SNP [dm6]	C	T	2.000e^-4	0.731	INTRON SPR
3R	21290286	3R_21290286_SNP [dm3] 3R_25464564_SNP [dm6]	G	A	2.000e^-4	0.731	INTRON Fur1
3R	21290441	3R_21290441_SNP [dm3] 3R_25464719_SNP [dm6]	A	G	2.000e^-4	0.731	INTRON Fur1
2L	5628131	2L_5628131_SNP [dm3] 2L_5628131_SNP [dm6]	G	A	2.002e^-4	0.731	INTRON CG31646
2L	5628214	2L_5628214_DEL [dm3] 2L_5628214_DEL [dm6]	TC	T	2.002e^-4	0.731	INTRON CG31646	TF binding site BDTNP1_TFBS_twi
3R	25635555	3R_25635555_SNP [dm3] 3R_29809833_SNP [dm6]	G	T	2.003e^-4	0.731	INTRON ca	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	6832302	3L_6832302_SNP [dm3] 3L_6839202_SNP [dm6]	T	G	2.008e^-4	0.731	INTERGENIC
3L	21253436	3L_21253436_SNP [dm3] 3L_21260336_SNP [dm6]	G	A	2.014e^-4	0.731	INTRON Eip78C
3R	23531402	3R_23531402_SNP [dm3] 3R_27705680_SNP [dm6]	G	A	2.015e^-4	0.731	SYNONYMOUS_CODING CG12428
X	12005820	X_12005820_SNP [dm3] X_12111787_SNP [dm6]	T	G	2.017e^-4	0.731	SYNONYMOUS_CODING CG2750 INTRON CR43960 & 1 other	TF binding site mE1_TFBS_sens
4	618050	4_618050_INS [dm3] 4_597424_INS [dm6]	T	TT	2.021e^-4	0.731	DOWNSTREAM CR45199 INTERGENIC	transposable element FlyBase
2L	5508215	2L_5508215_SNP [dm3] 2L_5508215_SNP [dm6]	C	A	2.022e^-4	0.731	INTERGENIC
2L	9779263	2L_9779263_SNP [dm3] 2L_9779263_SNP [dm6]	C	A	2.023e^-4	0.731	INTERGENIC
2L	6494636	2L_6494636_SNP [dm3] 2L_6494636_SNP [dm6]	C	T	2.048e^-4	0.731	UPSTREAM CG9547 INTRON CG31638	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	18195587	3L_18195587_SNP [dm3] 3L_18202487_SNP [dm6]	A	T	2.062e^-4	0.731	NON_SYNONYMOUS_CODING CG7320	TF binding site mE1_TFBS_inv
2L	1735809	2L_1735809_SNP [dm3] 2L_1735809_SNP [dm6]	G	A	2.068e^-4	0.731	INTRON CG17646
3L	4141723	3L_4141723_SNP [dm3] 3L_4141723_SNP [dm6]	T	C	2.073e^-4	0.731	SPLICE_SITE_REGION Akh SYNONYMOUS_CODING Akh UPSTREAM CG32260 DOWNSTREAM Ras64B
3R	2676560	3R_2676560_SNP [dm3] 3R_6850838_SNP [dm6]	T	G	2.076e^-4	0.731	UPSTREAM Scr INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2R	19601124	2R_19601124_SNP [dm3] 2R_23713601_SNP [dm6]	T	A	2.081e^-4	0.731	UPSTREAM Sesn INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3R	23526059	3R_23526059_DEL [dm3] 3R_27700337_DEL [dm6]	TT	T	2.085e^-4	0.731	UPSTREAM btz & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
2R	9145182	2R_9145182_SNP [dm3] 2R_13257677_SNP [dm6]	A	C	2.086e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
X	13638025	X_13638025_SNP [dm3] X_13743992_SNP [dm6]	T	A	2.097e^-4	0.731	UPSTREAM CR42861 INTRON Grip91	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3L	15147525	3L_15147525_SNP [dm3] 3L_15154425_SNP [dm6]	C	A	2.105e^-4	0.731	UTR_3_PRIME Msh6 DOWNSTREAM FucTA
2R	9453899	2R_9453899_SNP [dm3] 2R_13566394_SNP [dm6]	A	T	2.108e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
3L	16860532	3L_16860532_SNP [dm3] 3L_16867432_SNP [dm6]	G	A	2.130e^-4	0.731	INTRON Lmpt	TF binding site BDTNP1_TFBS_twi
3L	5023310	3L_5023310_SNP [dm3] 3L_5023310_SNP [dm6]	A	G	2.131e^-4	0.731	INTRON Con
2L	19824495	2L_19824495_SNP [dm3] 2L_19824495_SNP [dm6]	C	A	2.138e^-4	0.731	INTRON sick
3L	3995095	3L_3995095_SNP [dm3] 3L_3995095_SNP [dm6]	A	G	2.143e^-4	0.731	INTERGENIC
2R	9145115	2R_9145115_SNP [dm3] 2R_13257610_SNP [dm6]	T	G	2.166e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2R	9145105	2R_9145105_SNP [dm3] 2R_13257600_SNP [dm6]	T	A	2.168e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2R	9145114	2R_9145114_SNP [dm3] 2R_13257609_SNP [dm6]	A	G	2.168e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2R	9145119	2R_9145119_SNP [dm3] 2R_13257614_SNP [dm6]	T	A	2.168e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2R	9145133	2R_9145133_INS [dm3] 2R_13257628_INS [dm6]	CAC	AGTG	2.168e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2R	9145139	2R_9145139_INS [dm3] 2R_13257634_INS [dm6]	AC	GGTGA	2.168e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2R	9145142	2R_9145142_SNP [dm3] 2R_13257637_SNP [dm6]	T	C	2.168e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2R	9145159	2R_9145159_SNP [dm3] 2R_13257654_SNP [dm6]	T	G	2.168e^-4	0.731	UPSTREAM CG10799 DOWNSTREAM CG4716 INTERGENIC
2L	5965724	2L_5965724_SNP [dm3] 2L_5965724_SNP [dm6]	G	A	2.168e^-4	0.731	NON_SYNONYMOUS_CODING CG13992 UPSTREAM psd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	21207013	X_21207013_SNP [dm3] X_21335986_SNP [dm6]	T	A	2.172e^-4	0.731	INTRON tty	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	21207018	X_21207018_SNP [dm3] X_21335991_SNP [dm6]	C	A	2.172e^-4	0.731	SPLICE_SITE_REGION tty INTRON tty	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	1296035	2L_1296035_INS [dm3] 2L_1296035_INS [dm6]	A	ACATCCCGA	2.177e^-4	0.731	UTR_3_PRIME robo3
X	890696	X_890696_SNP [dm3] X_996663_SNP [dm6]	A	G	2.178e^-4	0.731	INTERGENIC
2R	1637566	2R_1637566_SNP [dm3] 2R_5750061_SNP [dm6]	T	C	2.178e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_cad
2L	8151624	2L_8151624_SNP [dm3] 2L_8151624_SNP [dm6]	C	A	2.181e^-4	0.731	INTRON CG8552 & 1 other
2L	11209388	2L_11209388_SNP [dm3] 2L_11209388_SNP [dm6]	G	A	2.181e^-4	0.731	INTERGENIC	silencer mE1_HDAC_PRE
3L	5009816	3L_5009816_SNP [dm3] 3L_5009816_SNP [dm6]	T	G	2.189e^-4	0.731	INTRON Con	TF binding site BDTNP1_TFBS_twi
2R	11722627	2R_11722627_SNP [dm3] 2R_15835122_SNP [dm6]	A	G	2.207e^-4	0.731	UPSTREAM Poxn INTRON tun	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
3L	4793148	3L_4793148_SNP [dm3] 3L_4793148_SNP [dm6]	G	A	2.221e^-4	0.731	INTRON RhoGEF64C	TF binding site mE1_TFBS_chinmo
3R	12142983	3R_12142983_SNP [dm3] 3R_16317261_SNP [dm6]	C	T	2.226e^-4	0.731	INTRON Sulf1
X	793987	X_793987_SNP [dm3] X_899954_SNP [dm6]	G	A	2.240e^-4	0.731	UPSTREAM CG43867 INTRON CG43867	TF binding site BDTNP1_TFBS_z mE1_TFBS_sens
2R	14270338	2R_14270338_SNP [dm3] 2R_18382833_SNP [dm6]	G	A	2.244e^-4	0.731	NON_SYNONYMOUS_CODING IM23 UPSTREAM CG43202
X	4095754	X_4095754_SNP [dm3] X_4201721_SNP [dm6]	A	T	2.267e^-4	0.731	INTRON Fas2
3R	26038971	3R_26038971_SNP [dm3] 3R_30213249_SNP [dm6]	G	C	2.273e^-4	0.731	DOWNSTREAM CecB & 2 others INTERGENIC
2L	4628229	2L_4628229_SNP [dm3] 2L_4628229_SNP [dm6]	A	G	2.273e^-4	0.731	INTERGENIC
2R	7082463	2R_7082463_SNP [dm3] 2R_11194958_SNP [dm6]	A	G	2.274e^-4	0.731	INTRON shn	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	12846009	2R_12846009_SNP [dm3] 2R_16958504_SNP [dm6]	T	C	2.277e^-4	0.731	SYNONYMOUS_CODING CG6665 DOWNSTREAM CG9010	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	13637648	X_13637648_SNP [dm3] X_13743615_SNP [dm6]	T	A	2.280e^-4	0.731	NON_SYNONYMOUS_CODING Grip91	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	5343691	2R_5343691_SNP [dm3] 2R_9456186_SNP [dm6]	G	T	2.286e^-4	0.731	INTRON Camta	TF binding site mE1_TFBS_cad
2L	2680402	2L_2680402_SNP [dm3] 2L_2680402_SNP [dm6]	T	A	2.290e^-4	0.731	INTRON CG31690
3R	26138493	3R_26138493_SNP [dm3] 3R_30312771_SNP [dm6]	G	T	2.295e^-4	0.731	INTRON hdc	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo
3L	12212298	3L_12212298_SNP [dm3] 3L_12219198_SNP [dm6]	G	A	2.304e^-4	0.731	INTRON app
2L	11341024	2L_11341024_SNP [dm3] 2L_11341024_SNP [dm6]	G	A	2.304e^-4	0.731	INTERGENIC
3R	2666866	3R_2666866_DEL [dm3] 3R_6841144_DEL [dm6]	AG	A	2.306e^-4	0.731	INTRON Scr	TF binding site BDTNP1_TFBS_Med mE1_TFBS_cad
2L	3166779	2L_3166779_SNP [dm3] 2L_3166779_SNP [dm6]	A	G	2.315e^-4	0.731	INTRON Hydr2
3R	19225483	3R_19225483_SNP [dm3] 3R_23399761_SNP [dm6]	G	A	2.315e^-4	0.731	EXON CR44323	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	2700962	2L_2700962_SNP [dm3] 2L_2700962_SNP [dm6]	C	T	2.325e^-4	0.731	INTRON CG31690	TF binding site mE1_TFBS_cad
3L	4084385	3L_4084385_SNP [dm3] 3L_4084385_SNP [dm6]	C	A	2.330e^-4	0.731	INTRON Gad1
X	15992757	X_15992757_SNP [dm3] X_16098724_SNP [dm6]	A	G	2.330e^-4	0.731	SYNONYMOUS_CODING CG42353 START_GAINED CG42354 UTR_5_PRIME CG42354
3L	3003356	3L_3003356_SNP [dm3] 3L_3003356_SNP [dm6]	G	T	2.333e^-4	0.731	UPSTREAM FMRFaR INTRON FMRFaR
3L	14997647	3L_14997647_DEL [dm3] 3L_15004547_DEL [dm6]	AAATAC	G	2.350e^-4	0.731	INTRON Reck
3R	19173718	3R_19173718_MNP [dm3] 3R_23347996_MNP [dm6]	ATA	CCG	2.355e^-4	0.731	UPSTREAM DNApol-epsilon INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	21212157	X_21212157_SNP [dm3] X_21341130_SNP [dm6]	G	A	2.360e^-4	0.731	SYNONYMOUS_CODING fliI	TF binding site mE1_TFBS_chinmo
2L	11386955	2L_11386955_SNP [dm3] 2L_11386955_SNP [dm6]	A	T	2.364e^-4	0.731	DOWNSTREAM CR43681 INTERGENIC	regulatory region REDfly_CRMs
2L	11386977	2L_11386977_SNP [dm3] 2L_11386977_SNP [dm6]	T	G	2.364e^-4	0.731	DOWNSTREAM CR43681 INTERGENIC	regulatory region REDfly_CRMs
3L	3277084	3L_3277084_SNP [dm3] 3L_3277084_SNP [dm6]	T	G	2.365e^-4	0.731	DOWNSTREAM CG14960 INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
X	21208361	X_21208361_SNP [dm3] X_21337334_SNP [dm6]	A	G	2.368e^-4	0.731	INTRON tty	TF binding site BDTNP1_TFBS_dl
X	21208382	X_21208382_SNP [dm3] X_21337355_SNP [dm6]	G	T	2.368e^-4	0.731	INTRON tty	TF binding site BDTNP1_TFBS_dl
2R	4831458	2R_4831458_SNP [dm3] 2R_8943953_SNP [dm6]	G	C	2.370e^-4	0.731	DOWNSTREAM CG8230 EXON CR44274
3L	4025789	3L_4025789_SNP [dm3] 3L_4025789_SNP [dm6]	A	T	2.374e^-4	0.731	UTR_5_PRIME CG11594 UPSTREAM CG11594 & 1 other INTRON CG11594
X	15393174	X_15393174_SNP [dm3] X_15499141_SNP [dm6]	G	A	2.385e^-4	0.731	UTR_5_PRIME Gmap INTRON Gmap	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	19374046	X_19374046_DEL [dm3] X_19480013_DEL [dm6]	TA	T	2.388e^-4	0.731	UTR_5_PRIME mRpS14 & 1 other UPSTREAM Nat1 & 2 others	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_ttk mE1_TFBS_Ubx
2L	13252683	2L_13252683_SNP [dm3] 2L_13252683_SNP [dm6]	A	C	2.389e^-4	0.731	INTRON CG31728
2L	5965533	2L_5965533_SNP [dm3] 2L_5965533_SNP [dm6]	G	A	2.398e^-4	0.731	SYNONYMOUS_CODING CG13992 UPSTREAM psd
X	945810	X_945810_SNP [dm3] X_1051777_SNP [dm6]	G	A	2.411e^-4	0.731	NON_SYNONYMOUS_CODING CG14629 INTRON CR44779	TF binding site mE1_TFBS_chinmo
2R	6295596	2R_6295596_SNP [dm3] 2R_10408091_SNP [dm6]	G	T	2.411e^-4	0.731	UPSTREAM CG12898 DOWNSTREAM CG43177 INTRON CG42732
3R	15175812	3R_15175812_SNP [dm3] 3R_19350090_SNP [dm6]	G	A	2.412e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16940188	2L_16940188_SNP [dm3] 2L_16940188_SNP [dm6]	C	G	2.427e^-4	0.731	INTERGENIC
2L	16095855	2L_16095855_SNP [dm3] 2L_16095855_SNP [dm6]	A	G	2.442e^-4	0.731	NON_SYNONYMOUS_CODING CG4891
X	21051036	X_21051036_SNP [dm3] X_21180009_SNP [dm6]	C	T	2.445e^-4	0.731	INTERGENIC
2L	10096460	2L_10096460_SNP [dm3] 2L_10096460_SNP [dm6]	C	T	2.448e^-4	0.731	INTRON CG44153 & 1 other
3L	18061234	3L_18061234_SNP [dm3] 3L_18068134_SNP [dm6]	C	T	2.457e^-4	0.731	DOWNSTREAM CG44006 INTERGENIC
3R	26707055	3R_26707055_SNP [dm3] 3R_30881333_SNP [dm6]	T	A	2.465e^-4	0.731	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	18061340	3L_18061340_SNP [dm3] 3L_18068240_SNP [dm6]	G	T	2.466e^-4	0.731	DOWNSTREAM CG44006 INTERGENIC
2L	8851004	2L_8851004_SNP [dm3] 2L_8851004_SNP [dm6]	T	A	2.468e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
2R	13574723	2R_13574723_SNP [dm3] 2R_17687218_SNP [dm6]	T	G	2.468e^-4	0.731	DOWNSTREAM CG42562 INTRON HPS4
3L	5023325	3L_5023325_SNP [dm3] 3L_5023325_SNP [dm6]	C	A	2.471e^-4	0.731	INTRON Con
X	6946864	X_6946864_SNP [dm3] X_7052831_SNP [dm6]	A	C	2.476e^-4	0.731	INTRON CG12541
2L	5920995	2L_5920995_SNP [dm3] 2L_5920995_SNP [dm6]	T	A	2.488e^-4	0.731	INTRON bchs
2L	7085754	2L_7085754_SNP [dm3] 2L_7085754_SNP [dm6]	A	T	2.499e^-4	0.731	INTERGENIC
3L	7946832	3L_7946832_SNP [dm3] 3L_7953732_SNP [dm6]	G	A	2.502e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_cad
2L	9981987	2L_9981987_SNP [dm3] 2L_9981987_SNP [dm6]	T	A	2.502e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_cad
3L	10834669	3L_10834669_SNP [dm3] 3L_10841569_SNP [dm6]	A	T	2.507e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	10834671	3L_10834671_INS [dm3] 3L_10841571_INS [dm6]	A	GT	2.507e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	19347204	X_19347204_SNP [dm3] X_19453171_SNP [dm6]	G	C	2.509e^-4	0.731	INTRON kek5	TF binding site mE1_TFBS_chinmo
2R	17901287	2R_17901287_SNP [dm3] 2R_22013782_SNP [dm6]	T	C	2.509e^-4	0.731	INTRON CG34370
2R	10616707	2R_10616707_SNP [dm3] 2R_14729202_SNP [dm6]	T	A	2.518e^-4	0.731	INTERGENIC
2R	10616709	2R_10616709_SNP [dm3] 2R_14729204_SNP [dm6]	G	A	2.518e^-4	0.731	INTERGENIC
2L	19845257	2L_19845257_SNP [dm3] 2L_19845257_SNP [dm6]	C	T	2.521e^-4	0.731	INTRON sick
X	19453798	X_19453798_DEL [dm3] X_19559765_DEL [dm6]	ATACA	A	2.538e^-4	0.731	UTR_3_PRIME Grip84 DOWNSTREAM mir-975 & 2 others
X	16064410	X_16064410_SNP [dm3] X_16170377_SNP [dm6]	A	G	2.541e^-4	0.731	INTERGENIC
2R	11141515	2R_11141515_SNP [dm3] 2R_15254010_SNP [dm6]	A	G	2.544e^-4	0.731	INTRON scb	TF binding site mE1_TFBS_cad
2R	11141516	2R_11141516_SNP [dm3] 2R_15254011_SNP [dm6]	T	A	2.544e^-4	0.731	INTRON scb	TF binding site mE1_TFBS_cad
2R	10616713	2R_10616713_SNP [dm3] 2R_14729208_SNP [dm6]	A	T	2.549e^-4	0.731	INTERGENIC
2R	10103992	2R_10103992_SNP [dm3] 2R_14216487_SNP [dm6]	G	T	2.551e^-4	0.731	UPSTREAM mir-308 INTRON RpS23	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Ubx
X	22063731	X_22063731_INS [dm3] X_22661895_INS [dm6]	C	CTGC	2.558e^-4	0.731	INTRON CR44997
2L	15305165	2L_15305165_SNP [dm3] 2L_15305165_SNP [dm6]	G	A	2.563e^-4	0.731	INTERGENIC
X	16786983	X_16786983_SNP [dm3] X_16892950_SNP [dm6]	T	A	2.567e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_kn
2L	2679425	2L_2679425_SNP [dm3] 2L_2679425_SNP [dm6]	C	T	2.573e^-4	0.731	INTRON CG31690
2L	2679438	2L_2679438_SNP [dm3] 2L_2679438_SNP [dm6]	A	T	2.573e^-4	0.731	INTRON CG31690
3L	5541486	3L_5541486_SNP [dm3] 3L_5548386_SNP [dm6]	G	T	2.584e^-4	0.731	INTRON CG10625
X	19454933	X_19454933_SNP [dm3] X_19560900_SNP [dm6]	C	T	2.589e^-4	0.731	UTR_3_PRIME Grip84 UPSTREAM mir-978 & 1 other DOWNSTREAM Grip84
X	21917684	X_21917684_SNP [dm3] X_22515848_SNP [dm6]	T	G	2.590e^-4	0.731	UPSTREAM CR43962 INTRON CG17600	TF binding site mE1_TFBS_HSA
X	21917686	X_21917686_SNP [dm3] X_22515850_SNP [dm6]	A	C	2.590e^-4	0.731	UPSTREAM CR43962 INTRON CG17600	TF binding site mE1_TFBS_HSA
X	22063758	X_22063758_SNP [dm3] X_22661922_SNP [dm6]	C	G	2.605e^-4	0.731	INTRON CR44997
3L	2718618	3L_2718618_SNP [dm3] 3L_2718618_SNP [dm6]	G	A	2.608e^-4	0.731	UTR_3_PRIME Mrtf DOWNSTREAM Mrtf
3R	25318593	3R_25318593_INS [dm3] 3R_29492871_INS [dm6]	A	AGACCTAATTA...	2.619e^-4	0.731	UPSTREAM Diedel INTRON CG2310	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_zfh1
2L	6532975	2L_6532975_SNP [dm3] 2L_6532975_SNP [dm6]	C	T	2.622e^-4	0.731	INTRON eya	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4629678	2L_4629678_SNP [dm3] 2L_4629678_SNP [dm6]	A	C	2.625e^-4	0.731	INTERGENIC
3L	5410078	3L_5410078_SNP [dm3] 3L_5416978_SNP [dm6]	G	A	2.628e^-4	0.731	INTERGENIC
2L	11775525	2L_11775525_SNP [dm3] 2L_11775525_SNP [dm6]	C	G	2.630e^-4	0.731	INTERGENIC
3R	23574997	3R_23574997_SNP [dm3] 3R_27749275_SNP [dm6]	C	G	2.640e^-4	0.731	DOWNSTREAM Ets98B INTERGENIC
3R	24688016	3R_24688016_SNP [dm3] 3R_28862294_SNP [dm6]	T	A	2.643e^-4	0.731	INTRON spg	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
X	16018665	X_16018665_SNP [dm3] X_16124632_SNP [dm6]	G	C	2.646e^-4	0.731	UPSTREAM disco-r INTRON disco-r
3L	9753099	3L_9753099_DEL [dm3] 3L_9759999_DEL [dm6]	GC	G	2.649e^-4	0.731	UTR_5_PRIME CG42268 UPSTREAM CR45407 INTRON CG42268
2R	10581365	2R_10581365_SNP [dm3] 2R_14693860_SNP [dm6]	A	C	2.654e^-4	0.731	INTRON mspo
3L	2744849	3L_2744849_SNP [dm3] 3L_2744849_SNP [dm6]	T	A	2.677e^-4	0.731	INTRON Mrtf
2R	11722636	2R_11722636_SNP [dm3] 2R_15835131_SNP [dm6]	C	A	2.679e^-4	0.731	UPSTREAM Poxn INTRON tun	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
3R	23820918	3R_23820918_SNP [dm3] 3R_27995196_SNP [dm6]	G	A	2.682e^-4	0.731	INTERGENIC
2L	3780919	2L_3780919_SNP [dm3] 2L_3780919_SNP [dm6]	C	T	2.683e^-4	0.731	INTRON bowl	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	4591475	2L_4591475_SNP [dm3] 2L_4591475_SNP [dm6]	G	A	2.684e^-4	0.731	INTRON dp	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
X	16740321	X_16740321_SNP [dm3] X_16846288_SNP [dm6]	C	T	2.697e^-4	0.731	SYNONYMOUS_CODING CG13003	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5427878	2L_5427878_SNP [dm3] 2L_5427878_SNP [dm6]	T	C	2.703e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	13873855	2R_13873855_SNP [dm3] 2R_17986350_SNP [dm6]	G	A	2.704e^-4	0.731	INTRON dpr13
2R	19523361	2R_19523361_SNP [dm3] 2R_23635838_SNP [dm6]	T	C	2.706e^-4	0.731	INTRON retn	TF binding site mE1_TFBS_cad
3R	23519959	3R_23519959_SNP [dm3] 3R_27694237_SNP [dm6]	A	T	2.706e^-4	0.731	UPSTREAM CG43319 & 1 other INTERGENIC
2R	9814393	2R_9814393_SNP [dm3] 2R_13926888_SNP [dm6]	C	A	2.711e^-4	0.731	INTRON shot	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2R	10616675	2R_10616675_SNP [dm3] 2R_14729170_SNP [dm6]	G	A	2.713e^-4	0.731	INTERGENIC
2L	2433019	2L_2433019_SNP [dm3] 2L_2433019_SNP [dm6]	A	G	2.714e^-4	0.731	INTRON dpp
X	13063969	X_13063969_SNP [dm3] X_13169936_SNP [dm6]	C	G	2.717e^-4	0.731	INTRON CG34411
3R	13315777	3R_13315777_SNP [dm3] 3R_17490055_SNP [dm6]	C	T	2.721e^-4	0.731	INTRON Dscam3
2R	10104222	2R_10104222_SNP [dm3] 2R_14216717_SNP [dm6]	A	T	2.730e^-4	0.731	UPSTREAM mir-308 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
2R	17901351	2R_17901351_SNP [dm3] 2R_22013846_SNP [dm6]	A	C	2.734e^-4	0.731	INTRON CG34370
2L	7486720	2L_7486720_SNP [dm3] 2L_7486720_SNP [dm6]	T	G	2.736e^-4	0.731	INTRON Ziz
3L	14997654	3L_14997654_SNP [dm3] 3L_15004554_SNP [dm6]	A	G	2.742e^-4	0.731	INTRON Reck
3L	14997656	3L_14997656_DEL [dm3] 3L_15004556_DEL [dm6]	TAGCAA	T	2.742e^-4	0.731	INTRON Reck
3L	14997663	3L_14997663_SNP [dm3] 3L_15004563_SNP [dm6]	C	T	2.742e^-4	0.731	INTRON Reck
3L	14997669	3L_14997669_SNP [dm3] 3L_15004569_SNP [dm6]	A	T	2.742e^-4	0.731	INTRON Reck
3L	14997671	3L_14997671_DEL [dm3] 3L_15004571_DEL [dm6]	CGTAT	C	2.742e^-4	0.731	INTRON Reck
3L	14997682	3L_14997682_SNP [dm3] 3L_15004582_SNP [dm6]	T	C	2.742e^-4	0.731	INTRON Reck
3L	14997683	3L_14997683_SNP [dm3] 3L_15004583_SNP [dm6]	T	A	2.742e^-4	0.731	INTRON Reck
3L	14997685	3L_14997685_SNP [dm3] 3L_15004585_SNP [dm6]	G	A	2.742e^-4	0.731	INTRON Reck
3L	14997686	3L_14997686_SNP [dm3] 3L_15004586_SNP [dm6]	G	C	2.742e^-4	0.731	INTRON Reck
3L	14997700	3L_14997700_SNP [dm3] 3L_15004600_SNP [dm6]	T	G	2.742e^-4	0.731	INTRON Reck
3L	9299939	3L_9299939_SNP [dm3] 3L_9306839_SNP [dm6]	T	G	2.744e^-4	0.731	INTERGENIC
3R	22412517	3R_22412517_SNP [dm3] 3R_26586795_SNP [dm6]	A	G	2.750e^-4	0.731	SYNONYMOUS_CODING scrib INTRON scrib
3R	22542180	3R_22542180_SNP [dm3] 3R_26716458_SNP [dm6]	A	G	2.751e^-4	0.731	NON_SYNONYMOUS_CODING CG6425	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	7398907	2R_7398907_SNP [dm3] 2R_11511402_SNP [dm6]	G	A	2.752e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	5606825	2R_5606825_SNP [dm3] 2R_9719320_SNP [dm6]	A	G	2.758e^-4	0.731	INTRON sqa
3R	23861505	3R_23861505_SNP [dm3] 3R_28035783_SNP [dm6]	G	T	2.778e^-4	0.731	INTRON CG34362
X	13573182	X_13573182_SNP [dm3] X_13679149_SNP [dm6]	T	G	2.780e^-4	0.731	SYNONYMOUS_CODING CG12177	TF binding site BDTNP1_TFBS_twi
2L	12993504	2L_12993504_SNP [dm3] 2L_12993504_SNP [dm6]	T	A	2.791e^-4	0.731	DOWNSTREAM CG12404 INTERGENIC
2L	16942481	2L_16942481_SNP [dm3] 2L_16942481_SNP [dm6]	C	G	2.791e^-4	0.731	INTERGENIC
X	17101895	X_17101895_SNP [dm3] X_17207862_SNP [dm6]	T	G	2.792e^-4	0.731	UPSTREAM CG32563 DOWNSTREAM CG32564 INTERGENIC
X	15995719	X_15995719_SNP [dm3] X_16101686_SNP [dm6]	G	T	2.803e^-4	0.731	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	2669154	X_2669154_INS [dm3] X_2775121_INS [dm6]	A	AGA	2.807e^-4	0.731	INTRON kirre
2L	5490456	2L_5490456_INS [dm3] 2L_5490456_INS [dm6]	G	GGCTG	2.807e^-4	0.731	INTERGENIC
3L	4364254	3L_4364254_SNP [dm3] 3L_4364254_SNP [dm6]	A	C	2.808e^-4	0.731	UPSTREAM mRpS6 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
3L	4364683	3L_4364683_SNP [dm3] 3L_4364683_SNP [dm6]	T	A	2.808e^-4	0.731	UTR_5_PRIME mRpS6 UPSTREAM Cip4 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	8325707	2L_8325707_SNP [dm3] 2L_8325707_SNP [dm6]	C	A	2.809e^-4	0.731	UPSTREAM CG7781 INTERGENIC
3R	24706419	3R_24706419_INS [dm3] 3R_28880697_INS [dm6]	A	ATA	2.815e^-4	0.731	UPSTREAM CG14527 & 1 other INTRON CG33203
X	22329041	X_22329041_SNP [dm3] X_22927205_SNP [dm6]	A	T	2.818e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	14897267	X_14897267_SNP [dm3] X_15003234_SNP [dm6]	A	C	2.821e^-4	0.731	INTRON eag
3L	2744793	3L_2744793_SNP [dm3] 3L_2744793_SNP [dm6]	C	T	2.833e^-4	0.731	INTRON Mrtf
3L	11474331	3L_11474331_SNP [dm3] 3L_11481231_SNP [dm6]	C	A	2.838e^-4	0.731	INTERGENIC
2L	18158529	2L_18158529_SNP [dm3] 2L_18158529_SNP [dm6]	T	C	2.845e^-4	0.731	SYNONYMOUS_CODING CG7200	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2L	1271798	2L_1271798_SNP [dm3] 2L_1271798_SNP [dm6]	A	T	2.850e^-4	0.731	INTRON robo3
2L	16877424	2L_16877424_SNP [dm3] 2L_16877424_SNP [dm6]	C	T	2.851e^-4	0.731	DOWNSTREAM CG32832 INTRON CR31781	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	23526080	3R_23526080_SNP [dm3] 3R_27700358_SNP [dm6]	T	C	2.859e^-4	0.731	UPSTREAM btz & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
2R	10103405	2R_10103405_SNP [dm3] 2R_14215900_SNP [dm6]	C	T	2.873e^-4	0.731	UPSTREAM mir-308 INTRON RpS23	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_sens
3R	20905989	3R_20905989_SNP [dm3] 3R_25080267_SNP [dm6]	C	T	2.882e^-4	0.731	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12832762	X_12832762_SNP [dm3] X_12938729_SNP [dm6]	G	A	2.895e^-4	0.731	UTR_5_PRIME fne INTRON fne	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	16012469	2L_16012469_SNP [dm3] 2L_16012469_SNP [dm6]	T	C	2.899e^-4	0.731	INTRON beat-Ic
X	5472149	X_5472149_SNP [dm3] X_5578116_SNP [dm6]	A	T	2.908e^-4	0.731	INTERGENIC
2L	10296397	2L_10296397_SNP [dm3] 2L_10296397_SNP [dm6]	A	C	2.913e^-4	0.731	INTRON CYLD	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	22125105	3R_22125105_INS [dm3] 3R_26299383_INS [dm6]	A	ATCT	2.914e^-4	0.731	INTERGENIC
3R	22125107	3R_22125107_INS [dm3] 3R_26299385_INS [dm6]	A	ACACTC	2.914e^-4	0.731	INTERGENIC
3R	22125110	3R_22125110_SNP [dm3] 3R_26299388_SNP [dm6]	G	A	2.914e^-4	0.731	INTERGENIC
3R	22125212	3R_22125212_SNP [dm3] 3R_26299490_SNP [dm6]	T	C	2.914e^-4	0.731	INTERGENIC
3R	22125239	3R_22125239_SNP [dm3] 3R_26299517_SNP [dm6]	C	A	2.914e^-4	0.731	INTERGENIC
3L	10834598	3L_10834598_SNP [dm3] 3L_10841498_SNP [dm6]	A	G	2.917e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	3794644	X_3794644_SNP [dm3] X_3900611_SNP [dm6]	T	A	2.919e^-4	0.731	INTRON CG42541
2R	6295115	2R_6295115_SNP [dm3] 2R_10407610_SNP [dm6]	C	T	2.930e^-4	0.731	UPSTREAM CG12898 DOWNSTREAM CG43177 INTRON CG42732
2R	19572058	2R_19572058_SNP [dm3] 2R_23684535_SNP [dm6]	C	T	2.934e^-4	0.731	UTR_3_PRIME St3 DOWNSTREAM l_2_efl INTRON St3	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2R	15067261	2R_15067261_SNP [dm3] 2R_19179756_SNP [dm6]	C	T	2.939e^-4	0.731	SYNONYMOUS_CODING hppy	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_Trl
3L	21443076	3L_21443076_SNP [dm3] 3L_21449976_SNP [dm6]	G	A	2.958e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12206781	X_12206781_SNP [dm3] X_12312748_SNP [dm6]	T	A	2.965e^-4	0.731	INTRON Ten-a
3R	19225612	3R_19225612_SNP [dm3] 3R_23399890_SNP [dm6]	A	G	2.967e^-4	0.731	UPSTREAM CR44323 INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	2782912	3L_2782912_SNP [dm3] 3L_2782912_SNP [dm6]	C	T	2.975e^-4	0.731	SYNONYMOUS_CODING pgant6 DOWNSTREAM mRpS35	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	23652337	3R_23652337_SNP [dm3] 3R_27826615_SNP [dm6]	G	C	2.978e^-4	0.731	INTRON CG34353	TF binding site BDTNP1_TFBS_da
2L	8363493	2L_8363493_SNP [dm3] 2L_8363493_SNP [dm6]	C	A	2.995e^-4	0.731	UTR_3_PRIME RpS13 DOWNSTREAM RpS13	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_sens
X	4989176	X_4989176_SNP [dm3] X_5095143_SNP [dm6]	A	G	2.998e^-4	0.731	INTRON rg & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	4989282	X_4989282_SNP [dm3] X_5095249_SNP [dm6]	T	G	2.998e^-4	0.731	INTRON rg & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	15393432	X_15393432_SNP [dm3] X_15499399_SNP [dm6]	A	G	3.001e^-4	0.731	UTR_5_PRIME Gmap INTRON Gmap	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16901349	2L_16901349_SNP [dm3] 2L_16901349_SNP [dm6]	T	G	3.017e^-4	0.731	NON_SYNONYMOUS_CODING CG12288 UPSTREAM CG31805 INTRON tweek	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	17419802	2R_17419802_SNP [dm3] 2R_21532297_SNP [dm6]	G	A	3.017e^-4	0.731	UPSTREAM CR44725 INTRON Egfr
3L	18331130	3L_18331130_SNP [dm3] 3L_18338030_SNP [dm6]	G	C	3.023e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	2830284	3L_2830284_INS [dm3] 3L_2830284_INS [dm6]	G	GCGCATTTTAAG...	3.025e^-4	0.731	INTRON CG43444
2R	11722626	2R_11722626_SNP [dm3] 2R_15835121_SNP [dm6]	A	T	3.026e^-4	0.731	UPSTREAM Poxn INTRON tun	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
3L	21245227	3L_21245227_SNP [dm3] 3L_21252127_SNP [dm6]	A	G	3.037e^-4	0.731	INTRON Eip78C	TF binding site mE1_TFBS_inv
2L	8591254	2L_8591254_SNP [dm3] 2L_8591254_SNP [dm6]	G	A	3.038e^-4	0.731	UPSTREAM CR43855 INTRON Sema-1a & 1 other
3R	17279461	3R_17279461_SNP [dm3] 3R_21453739_SNP [dm6]	T	G	3.050e^-4	0.731	INTERGENIC
2L	17024745	2L_17024745_INS [dm3] 2L_17024745_INS [dm6]	A	ATTT	3.064e^-4	0.731	INTERGENIC
X	16264489	X_16264489_SNP [dm3] X_16370456_SNP [dm6]	A	G	3.066e^-4	0.731	UTR_3_PRIME nonA INTRON nonA
X	19372568	X_19372568_SNP [dm3] X_19478535_SNP [dm6]	T	G	3.087e^-4	0.731	SYNONYMOUS_CODING CG32533 DOWNSTREAM mRpS14	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	2439159	2L_2439159_SNP [dm3] 2L_2439159_SNP [dm6]	T	C	3.094e^-4	0.731	INTRON dpp	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
X	8242794	X_8242794_SNP [dm3] X_8348761_SNP [dm6]	G	A	3.103e^-4	0.731	INTRON nAChRalpha3
X	16786990	X_16786990_SNP [dm3] X_16892957_SNP [dm6]	G	T	3.104e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_kn
3L	20277964	3L_20277964_SNP [dm3] 3L_20284864_SNP [dm6]	C	G	3.107e^-4	0.731	INTRON gogo
3R	23652138	3R_23652138_INS [dm3] 3R_27826416_INS [dm6]	C	CA	3.112e^-4	0.731	INTRON CG34353	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3L	5334822	3L_5334822_SNP [dm3] 3L_5341722_SNP [dm6]	T	A	3.122e^-4	0.731	UPSTREAM tRNA:S7:64D INTERGENIC
3R	15188212	3R_15188212_SNP [dm3] 3R_19362490_SNP [dm6]	G	A	3.129e^-4	0.731	INTERGENIC
3L	5090246	3L_5090246_SNP [dm3] 3L_5090246_SNP [dm6]	C	T	3.130e^-4	0.731	INTERGENIC
2R	9453749	2R_9453749_SNP [dm3] 2R_13566244_SNP [dm6]	G	A	3.135e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_Kr mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
3R	19173782	3R_19173782_SNP [dm3] 3R_23348060_SNP [dm6]	A	C	3.140e^-4	0.731	UPSTREAM DNApol-epsilon INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	1592136	3L_1592136_SNP [dm3] 3L_1592136_SNP [dm6]	G	A	3.145e^-4	0.731	INTRON CG13917	TF binding site BDTNP1_TFBS_dl
X	20927060	X_20927060_SNP [dm3] X_21056033_SNP [dm6]	T	A	3.150e^-4	0.731	INTRON bves	TF binding site BDTNP1_TFBS_dl
X	14896972	X_14896972_SNP [dm3] X_15002939_SNP [dm6]	C	G	3.152e^-4	0.731	INTRON eag
2R	5723329	2R_5723329_SNP [dm3] 2R_9835824_SNP [dm6]	G	T	3.156e^-4	0.731	INTRON hebe	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	18248268	2L_18248268_SNP [dm3] 2L_18248268_SNP [dm6]	A	G	3.163e^-4	0.731	INTRON CG42750
3R	23850644	3R_23850644_SNP [dm3] 3R_28024922_SNP [dm6]	G	A	3.164e^-4	0.731	INTERGENIC
3L	3148776	3L_3148776_SNP [dm3] 3L_3148776_SNP [dm6]	A	T	3.168e^-4	0.731	UPSTREAM BtbVII & 1 other INTRON BtbVII	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	16568080	X_16568080_SNP [dm3] X_16674047_SNP [dm6]	A	T	3.171e^-4	0.731	INTRON CG13012
3L	4793140	3L_4793140_INS [dm3] 3L_4793140_INS [dm6]	A	AA	3.172e^-4	0.731	INTRON RhoGEF64C	TF binding site mE1_TFBS_chinmo
3L	8410352	3L_8410352_SNP [dm3] 3L_8417252_SNP [dm6]	A	C	3.177e^-4	0.731	SYNONYMOUS_CODING CG32354	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	11221088	3L_11221088_SNP [dm3] 3L_11227988_SNP [dm6]	G	A	3.178e^-4	0.731	UTR_3_PRIME CG42671 INTRON CG42671	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	19173740	3R_19173740_SNP [dm3] 3R_23348018_SNP [dm6]	T	A	3.180e^-4	0.731	UPSTREAM DNApol-epsilon INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	19173747	3R_19173747_SNP [dm3] 3R_23348025_SNP [dm6]	T	C	3.180e^-4	0.731	UPSTREAM DNApol-epsilon INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	21323876	X_21323876_SNP [dm3] X_21452849_SNP [dm6]	G	A	3.180e^-4	0.731	INTRON CG42343
2L	15836531	2L_15836531_SNP [dm3] 2L_15836531_SNP [dm6]	A	G	3.181e^-4	0.731	UPSTREAM CG18518 DOWNSTREAM CR31822 INTERGENIC
3L	2397880	3L_2397880_SNP [dm3] 3L_2397880_SNP [dm6]	T	C	3.184e^-4	0.731	INTRON CG45186	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	3243957	2L_3243957_SNP [dm3] 2L_3243957_SNP [dm6]	G	A	3.190e^-4	0.731	INTERGENIC
X	13097445	X_13097445_SNP [dm3] X_13203412_SNP [dm6]	T	C	3.196e^-4	0.731	INTRON sno
2L	2080565	2L_2080565_SNP [dm3] 2L_2080565_SNP [dm6]	C	A	3.199e^-4	0.731	SYNONYMOUS_CODING CG12674 INTRON dpr3
X	19371743	X_19371743_SNP [dm3] X_19477710_SNP [dm6]	A	T	3.205e^-4	0.731	SYNONYMOUS_CODING CG32533	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15061158	2R_15061158_SNP [dm3] 2R_19173653_SNP [dm6]	C	A	3.231e^-4	0.731	INTRON CG10737
3L	5053086	3L_5053086_SNP [dm3] 3L_5053086_SNP [dm6]	G	A	3.232e^-4	0.731	INTRON Con
X	5342059	X_5342059_SNP [dm3] X_5448026_SNP [dm6]	G	A	3.234e^-4	0.731	INTRON SPR
2L	6500277	2L_6500277_SNP [dm3] 2L_6500277_SNP [dm6]	T	C	3.236e^-4	0.731	INTRON CG31637
2L	11386984	2L_11386984_SNP [dm3] 2L_11386984_SNP [dm6]	G	T	3.247e^-4	0.731	DOWNSTREAM CR43681 INTERGENIC	regulatory region REDfly_CRMs
X	14899468	X_14899468_SNP [dm3] X_15005435_SNP [dm6]	C	A	3.253e^-4	0.731	UTR_3_PRIME eag
2R	18870211	2R_18870211_SNP [dm3] 2R_22982688_SNP [dm6]	A	T	3.257e^-4	0.731	NON_SYNONYMOUS_CODING CG32834
2L	9614480	2L_9614480_SNP [dm3] 2L_9614480_SNP [dm6]	A	T	3.261e^-4	0.731	INTRON Trx-2	TF binding site BDTNP1_TFBS_dl
2L	8325693	2L_8325693_SNP [dm3] 2L_8325693_SNP [dm6]	C	T	3.262e^-4	0.731	UPSTREAM CG7781 INTERGENIC
2L	8325703	2L_8325703_SNP [dm3] 2L_8325703_SNP [dm6]	T	C	3.262e^-4	0.731	UPSTREAM CG7781 INTERGENIC
2L	2059331	2L_2059331_SNP [dm3] 2L_2059331_SNP [dm6]	T	A	3.264e^-4	0.731	UTR_3_PRIME dpr3
2R	20499098	2R_20499098_SNP [dm3] 2R_24611575_SNP [dm6]	T	A	3.265e^-4	0.731	UTR_5_PRIME CG4741 UPSTREAM CG3608 DOWNSTREAM CG42360 INTRON CG4741	TF binding site mE1_TFBS_HSA mE1_TFBS_Ubx
3L	4018534	3L_4018534_INS [dm3] 3L_4018534_INS [dm6]	T	TT	3.266e^-4	0.731	UPSTREAM fd64A INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	7222573	3L_7222573_SNP [dm3] 3L_7229473_SNP [dm6]	A	G	3.267e^-4	0.731	INTERGENIC
3L	10834659	3L_10834659_SNP [dm3] 3L_10841559_SNP [dm6]	T	C	3.267e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da
2R	9381224	2R_9381224_SNP [dm3] 2R_13493719_SNP [dm6]	C	T	3.272e^-4	0.731	INTRON bbc
X	15643882	X_15643882_SNP [dm3] X_15749849_SNP [dm6]	A	G	3.278e^-4	0.731	SYNONYMOUS_CODING CG8239 DOWNSTREAM Tcp-1zeta
2L	22485255	2L_22485255_SNP [dm3] 2L_22592523_SNP [dm6]	T	C	3.279e^-4	0.731	INTERGENIC
3L	8748562	3L_8748562_SNP [dm3] 3L_8755462_SNP [dm6]	A	T	3.286e^-4	0.731	UPSTREAM CG6576 INTRON Fhos
X	20013294	X_20013294_SNP [dm3] X_20119261_SNP [dm6]	T	C	3.288e^-4	0.731	INTERGENIC
3R	23820904	3R_23820904_SNP [dm3] 3R_27995182_SNP [dm6]	G	C	3.289e^-4	0.731	INTERGENIC
2L	4298438	2L_4298438_SNP [dm3] 2L_4298438_SNP [dm6]	A	G	3.292e^-4	0.731	INTRON tutl
2L	16879959	2L_16879959_SNP [dm3] 2L_16879959_SNP [dm6]	T	C	3.296e^-4	0.731	UPSTREAM CG32832 INTRON CG31743 & 1 other	TF binding site mE1_TFBS_Ubx
X	4989253	X_4989253_SNP [dm3] X_5095220_SNP [dm6]	C	T	3.298e^-4	0.731	INTRON rg & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	16875569	2L_16875569_SNP [dm3] 2L_16875569_SNP [dm6]	T	G	3.306e^-4	0.731	INTRON CR31781
3R	23872401	3R_23872401_SNP [dm3] 3R_28046679_SNP [dm6]	C	T	3.306e^-4	0.731	UPSTREAM CG34362 INTRON CG34362
3R	19173654	3R_19173654_SNP [dm3] 3R_23347932_SNP [dm6]	G	A	3.307e^-4	0.731	UPSTREAM DNApol-epsilon INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	19160041	3R_19160041_SNP [dm3] 3R_23334319_SNP [dm6]	G	A	3.308e^-4	0.731	INTRON pnt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3R	19170983	3R_19170983_INS [dm3] 3R_23345261_INS [dm6]	A	ACAAA	3.308e^-4	0.731	INTRON pnt	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Kr
X	11729038	X_11729038_SNP [dm3] X_11835005_SNP [dm6]	T	C	3.322e^-4	0.731	SYNONYMOUS_CODING rudhira DOWNSTREAM rudhira	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	2900062	2R_2900062_SNP [dm3] 2R_7012557_SNP [dm6]	C	T	3.323e^-4	0.731	UPSTREAM Tsp42Ed INTRON Tsp42Ee	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	5433155	3L_5433155_SNP [dm3] 3L_5440055_SNP [dm6]	A	T	3.325e^-4	0.731	UTR_3_PRIME CG34391 DOWNSTREAM CG34391
2L	4312253	2L_4312253_SNP [dm3] 2L_4312253_SNP [dm6]	G	A	3.335e^-4	0.731	INTRON tutl
X	4482295	X_4482295_SNP [dm3] X_4588262_SNP [dm6]	A	T	3.343e^-4	0.731	INTRON CR32773	TF binding site BDTNP1_TFBS_dl
2L	12417017	2L_12417017_SNP [dm3] 2L_12417017_SNP [dm6]	G	A	3.345e^-4	0.731	INTRON vir-1
3R	26054736	3R_26054736_DEL [dm3] 3R_30229014_DEL [dm6]	AA	A	3.358e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_HSA
X	15306549	X_15306549_SNP [dm3] X_15412516_SNP [dm6]	C	G	3.360e^-4	0.731	INTRON Cngl
2L	9038293	2L_9038293_DEL [dm3] 2L_9038293_DEL [dm6]	TTCTCATTGGCTCGAA...	T	3.367e^-4	0.731	INTERGENIC
X	20924774	X_20924774_SNP [dm3] X_21053747_SNP [dm6]	G	A	3.374e^-4	0.731	UTR_5_PRIME CG1518 UPSTREAM bves	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2L	8326647	2L_8326647_SNP [dm3] 2L_8326647_SNP [dm6]	T	C	3.420e^-4	0.731	UPSTREAM CG14275 INTERGENIC
3L	2784423	3L_2784423_SNP [dm3] 3L_2784423_SNP [dm6]	C	A	3.422e^-4	0.731	SYNONYMOUS_CODING pgant6
3R	14038077	3R_14038077_SNP [dm3] 3R_18212355_SNP [dm6]	T	G	3.422e^-4	0.731	INTRON CG7985
3R	12767213	3R_12767213_SNP [dm3] 3R_16941491_SNP [dm6]	T	C	3.422e^-4	0.731	INTRON Abd-B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
2R	14950635	2R_14950635_SNP [dm3] 2R_19063130_SNP [dm6]	G	C	3.438e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	25913742	3R_25913742_SNP [dm3] 3R_30088020_SNP [dm6]	C	A	3.440e^-4	0.731	INTRON sima
2L	12668135	2L_12668135_SNP [dm3] 2L_12668135_SNP [dm6]	C	A	3.453e^-4	0.731	SYNONYMOUS_CODING CG15485 INTRON pdm2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	20935144	X_20935144_SNP [dm3] X_21064117_SNP [dm6]	G	T	3.457e^-4	0.731	INTRON bves & 1 other
2L	11950569	2L_11950569_DEL [dm3] 2L_11950569_DEL [dm6]	AT	A	3.463e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4007955	3L_4007955_SNP [dm3] 3L_4007955_SNP [dm6]	T	C	3.477e^-4	0.731	INTERGENIC
2R	14116123	2R_14116123_SNP [dm3] 2R_18228618_SNP [dm6]	A	C	3.495e^-4	0.731	DOWNSTREAM CR45310 EXON CR45311
X	15101072	X_15101072_SNP [dm3] X_15207039_SNP [dm6]	G	A	3.499e^-4	0.731	UPSTREAM CG32588 INTERGENIC
3L	11550652	3L_11550652_SNP [dm3] 3L_11557552_SNP [dm6]	A	G	3.505e^-4	0.731	INTRON Mob2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	17261339	X_17261339_SNP [dm3] X_17367306_SNP [dm6]	G	A	3.520e^-4	0.731	INTERGENIC
X	16777453	X_16777453_DEL [dm3] X_16883420_DEL [dm6]	TAACAGTCCAA...	T	3.523e^-4	0.731	DOWNSTREAM CG4872 INTRON CG9104	TF binding site mE1_TFBS_chinmo
3L	2121464	3L_2121464_SNP [dm3] 3L_2121464_SNP [dm6]	C	A	3.523e^-4	0.731	INTRON zormin	TF binding site BDTNP1_TFBS_twi
2R	13253030	2R_13253030_SNP [dm3] 2R_17365525_SNP [dm6]	A	T	3.532e^-4	0.731	DOWNSTREAM mbl INTRON mbl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	19569866	2R_19569866_SNP [dm3] 2R_23682343_SNP [dm6]	C	T	3.542e^-4	0.731	SYNONYMOUS_CODING St1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	12071676	3R_12071676_SNP [dm3] 3R_16245954_SNP [dm6]	A	C	3.545e^-4	0.731	INTRON tara	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	17069103	2R_17069103_SNP [dm3] 2R_21181598_SNP [dm6]	T	A	3.550e^-4	0.731	DOWNSTREAM tRNA:CR33539 INTRON Pu	TF binding site mE1_TFBS_HSA
3R	26332860	3R_26332860_SNP [dm3] 3R_30507138_SNP [dm6]	T	G	3.563e^-4	0.731	NON_SYNONYMOUS_CODING CG15539 UPSTREAM CG34041 DOWNSTREAM mir-4908
3R	26332868	3R_26332868_SNP [dm3] 3R_30507146_SNP [dm6]	A	C	3.563e^-4	0.731	NON_SYNONYMOUS_CODING CG15539 UPSTREAM CG34041 DOWNSTREAM mir-4908
2L	5965441	2L_5965441_SNP [dm3] 2L_5965441_SNP [dm6]	T	C	3.564e^-4	0.731	UTR_3_PRIME CG13992 UPSTREAM psd
X	16951470	X_16951470_SNP [dm3] X_17057437_SNP [dm6]	C	T	3.564e^-4	0.731	INTRON CG45002
3L	1431105	3L_1431105_SNP [dm3] 3L_1431105_SNP [dm6]	A	G	3.568e^-4	0.731	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	1431112	3L_1431112_SNP [dm3] 3L_1431112_SNP [dm6]	C	T	3.568e^-4	0.731	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	11950081	2L_11950081_SNP [dm3] 2L_11950081_SNP [dm6]	C	G	3.572e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25904315	3R_25904315_SNP [dm3] 3R_30078593_SNP [dm6]	T	A	3.574e^-4	0.731	INTRON sima
3L	1539939	3L_1539939_SNP [dm3] 3L_1539939_SNP [dm6]	G	A	3.582e^-4	0.731	SYNONYMOUS_CODING CG7852	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	23526277	3R_23526277_SNP [dm3] 3R_27700555_SNP [dm6]	A	C	3.582e^-4	0.731	UTR_5_PRIME btz UPSTREAM ALiX INTRON btz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	14579191	3L_14579191_DEL [dm3] 3L_14586091_DEL [dm6]	CTGGTTATGTTAGATAGCCA...	C	3.588e^-4	0.731	INTRON HGTX	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3L	5053711	3L_5053711_SNP [dm3] 3L_5053711_SNP [dm6]	C	T	3.591e^-4	0.731	INTRON Con
3R	23492631	3R_23492631_SNP [dm3] 3R_27666909_SNP [dm6]	T	A	3.592e^-4	0.731	INTRON unc80
2L	702097	2L_702097_SNP [dm3] 2L_702097_SNP [dm6]	T	C	3.592e^-4	0.731	INTRON ds	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
2L	16873454	2L_16873454_SNP [dm3] 2L_16873454_SNP [dm6]	A	G	3.593e^-4	0.731	INTRON CR31781
3L	15457935	3L_15457935_SNP [dm3] 3L_15464835_SNP [dm6]	G	T	3.593e^-4	0.731	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	2696278	2L_2696278_SNP [dm3] 2L_2696278_SNP [dm6]	G	A	3.596e^-4	0.731	NON_SYNONYMOUS_CODING CG15398 INTRON CG31690
2R	19818506	2R_19818506_SNP [dm3] 2R_23930983_SNP [dm6]	T	C	3.602e^-4	0.731	SYNONYMOUS_CODING Ca-P60A	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	16949746	2R_16949746_SNP [dm3] 2R_21062241_SNP [dm6]	G	A	3.607e^-4	0.731	SYNONYMOUS_CODING Cht8 DOWNSTREAM mRpL54 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	8811038	X_8811038_SNP [dm3] X_8917005_SNP [dm6]	G	T	3.617e^-4	0.731	INTRON rdgA
3R	23024940	3R_23024940_SNP [dm3] 3R_27199218_SNP [dm6]	C	T	3.619e^-4	0.731	INTERGENIC	regulatory region REDfly_CRMs
3L	4376549	3L_4376549_SNP [dm3] 3L_4376549_SNP [dm6]	A	G	3.623e^-4	0.731	DOWNSTREAM CR44360 INTRON DopEcR
2L	4253063	2L_4253063_MNP [dm3] 2L_4253063_MNP [dm6]	GTA	AGT	3.627e^-4	0.731	INTERGENIC
3L	4644652	3L_4644652_SNP [dm3] 3L_4644652_SNP [dm6]	A	T	3.650e^-4	0.731	INTRON axo	TF binding site BDTNP1_TFBS_dl
2L	8661095	2L_8661095_SNP [dm3] 2L_8661095_SNP [dm6]	C	T	3.662e^-4	0.731	INTRON Sema-1a
2R	7649586	2R_7649586_SNP [dm3] 2R_11762081_SNP [dm6]	T	C	3.667e^-4	0.731	INTRON ths
2L	8146634	2L_8146634_SNP [dm3] 2L_8146634_SNP [dm6]	A	G	3.674e^-4	0.731	UPSTREAM CG31606 INTRON CG8552 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	19851901	2L_19851901_SNP [dm3] 2L_19851901_SNP [dm6]	A	G	3.684e^-4	0.731	INTRON sick
2L	4305086	2L_4305086_SNP [dm3] 2L_4305086_SNP [dm6]	T	G	3.684e^-4	0.731	INTRON tutl
X	14897747	X_14897747_SNP [dm3] X_15003714_SNP [dm6]	C	A	3.684e^-4	0.731	INTRON eag
3R	19173582	3R_19173582_SNP [dm3] 3R_23347860_SNP [dm6]	G	A	3.693e^-4	0.731	UPSTREAM DNApol-epsilon INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	19173663	3R_19173663_SNP [dm3] 3R_23347941_SNP [dm6]	A	G	3.693e^-4	0.731	UPSTREAM DNApol-epsilon INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	5023324	3L_5023324_SNP [dm3] 3L_5023324_SNP [dm6]	T	G	3.694e^-4	0.731	INTRON Con
2R	4216491	2R_4216491_SNP [dm3] 2R_8328986_SNP [dm6]	T	C	3.694e^-4	0.731	INTRON pdm3
2L	1730272	2L_1730272_SNP [dm3] 2L_1730272_SNP [dm6]	C	T	3.699e^-4	0.731	SYNONYMOUS_CODING CG31937 UPSTREAM Eno DOWNSTREAM Rrp40 & 1 other	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	3931725	3L_3931725_SNP [dm3] 3L_3931725_SNP [dm6]	C	T	3.703e^-4	0.731	INTRON Eip63F-1
2L	12669310	2L_12669310_SNP [dm3] 2L_12669310_SNP [dm6]	T	A	3.710e^-4	0.731	UTR_5_PRIME CG15485 INTRON pdm2
2R	19570958	2R_19570958_SNP [dm3] 2R_23683435_SNP [dm6]	G	C	3.717e^-4	0.731	SYNONYMOUS_CODING St3 DOWNSTREAM St1	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	17396854	2R_17396854_SNP [dm3] 2R_21509349_SNP [dm6]	G	A	3.724e^-4	0.731	INTRON MESK2
X	20289111	X_20289111_SNP [dm3] X_20418084_SNP [dm6]	G	T	3.728e^-4	0.731	UTR_3_PRIME Obp19c DOWNSTREAM Obp19b	TF binding site mE1_TFBS_cad
3R	6440982	3R_6440982_SNP [dm3] 3R_10615260_SNP [dm6]	T	C	3.729e^-4	0.731	UPSTREAM hth INTRON hth	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	5606800	2R_5606800_SNP [dm3] 2R_9719295_SNP [dm6]	C	G	3.736e^-4	0.731	INTRON sqa	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	7946926	3L_7946926_SNP [dm3] 3L_7953826_SNP [dm6]	G	C	3.736e^-4	0.731	INTERGENIC
3L	1649806	3L_1649806_SNP [dm3] 3L_1649806_SNP [dm6]	C	T	3.747e^-4	0.731	INTRON CG13920
3L	1649808	3L_1649808_SNP [dm3] 3L_1649808_SNP [dm6]	A	C	3.747e^-4	0.731	INTRON CG13920
2L	11633751	2L_11633751_SNP [dm3] 2L_11633751_SNP [dm6]	C	T	3.749e^-4	0.731	INTERGENIC
X	17238462	X_17238462_SNP [dm3] X_17344429_SNP [dm6]	C	T	3.760e^-4	0.731	INTERGENIC
2L	12669028	2L_12669028_SNP [dm3] 2L_12669028_SNP [dm6]	T	G	3.760e^-4	0.731	NON_SYNONYMOUS_CODING CG15485 INTRON pdm2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	17667422	2L_17667422_SNP [dm3] 2L_17667422_SNP [dm6]	T	A	3.763e^-4	0.731	INTRON CadN
3L	5099636	3L_5099636_SNP [dm3] 3L_5099636_SNP [dm6]	T	C	3.766e^-4	0.731	EXON CR34047
3L	5099642	3L_5099642_SNP [dm3] 3L_5099642_SNP [dm6]	T	C	3.766e^-4	0.731	EXON CR34047
3L	8585351	3L_8585351_SNP [dm3] 3L_8592251_SNP [dm6]	C	G	3.768e^-4	0.731	SYNONYMOUS_CODING CG43078 INTRON CG43078	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	21915700	X_21915700_SNP [dm3] X_22513864_SNP [dm6]	A	T	3.770e^-4	0.731	DOWNSTREAM CR43962 INTERGENIC
3L	2101058	3L_2101058_SNP [dm3] 3L_2101058_SNP [dm6]	G	A	3.784e^-4	0.731	SYNONYMOUS_CODING sls	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	9004510	3L_9004510_SNP [dm3] 3L_9011410_SNP [dm6]	C	G	3.789e^-4	0.731	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3L	14755695	3L_14755695_SNP [dm3] 3L_14762595_SNP [dm6]	C	G	3.798e^-4	0.731	UPSTREAM CG33260 INTRON CG9384	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	2408207	3R_2408207_SNP [dm3] 3R_6582485_SNP [dm6]	A	G	3.800e^-4	0.731	DOWNSTREAM CG2336 INTRON dpr11
2R	17069116	2R_17069116_SNP [dm3] 2R_21181611_SNP [dm6]	T	A	3.801e^-4	0.731	DOWNSTREAM tRNA:CR33539 INTRON Pu	TF binding site mE1_TFBS_HSA
2R	17069126	2R_17069126_SNP [dm3] 2R_21181621_SNP [dm6]	T	G	3.801e^-4	0.731	DOWNSTREAM tRNA:CR33539 INTRON Pu	TF binding site mE1_TFBS_HSA
3R	23520543	3R_23520543_SNP [dm3] 3R_27694821_SNP [dm6]	A	C	3.805e^-4	0.731	UPSTREAM Acp98AB & 1 other DOWNSTREAM CG43319 INTERGENIC
3R	23824801	3R_23824801_SNP [dm3] 3R_27999079_SNP [dm6]	G	A	3.812e^-4	0.731	INTERGENIC
3R	21564802	3R_21564802_SNP [dm3] 3R_25739080_SNP [dm6]	T	G	3.822e^-4	0.731	SYNONYMOUS_CODING LpR2
3R	21564816	3R_21564816_SNP [dm3] 3R_25739094_SNP [dm6]	A	G	3.822e^-4	0.731	SYNONYMOUS_CODING LpR2
2L	11616601	2L_11616601_SNP [dm3] 2L_11616601_SNP [dm6]	C	A	3.823e^-4	0.731	INTRON kek2
X	2443401	X_2443401_DEL [dm3] X_2549368_DEL [dm6]	TCCAATTA	T	3.825e^-4	0.731	INTERGENIC
3L	5019696	3L_5019696_SNP [dm3] 3L_5019696_SNP [dm6]	A	G	3.834e^-4	0.731	INTRON Con
3L	5019702	3L_5019702_SNP [dm3] 3L_5019702_SNP [dm6]	G	T	3.834e^-4	0.731	INTRON Con
X	15083870	X_15083870_SNP [dm3] X_15189837_SNP [dm6]	T	C	3.835e^-4	0.731	UTR_3_PRIME CG43737
2R	20498867	2R_20498867_SNP [dm3] 2R_24611344_SNP [dm6]	C	A	3.846e^-4	0.731	UPSTREAM CG3608 DOWNSTREAM CG42360 INTRON CG4741	TF binding site mE1_TFBS_HSA mE1_TFBS_Ubx
X	18720107	X_18720107_SNP [dm3] X_18826074_SNP [dm6]	G	T	3.848e^-4	0.731	NON_SYNONYMOUS_CODING CG42450	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	22328967	X_22328967_SNP [dm3] X_22927131_SNP [dm6]	A	T	3.856e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	6296004	2R_6296004_INS [dm3] 2R_10408499_INS [dm6]	T	TGTT	3.857e^-4	0.731	DOWNSTREAM CG43177 & 1 other INTRON CG42732
3L	1400172	3L_1400172_SNP [dm3] 3L_1400172_SNP [dm6]	G	C	3.862e^-4	0.731	INTRON Ptp61F & 1 other
X	16032374	X_16032374_DEL [dm3] X_16138341_DEL [dm6]	AT	A	3.870e^-4	0.731	INTRON disco-r	TF binding site mE1_TFBS_HSA
3R	1787707	3R_1787707_SNP [dm3] 3R_5961985_SNP [dm6]	G	A	3.873e^-4	0.731	UPSTREAM CG11373 INTERGENIC
3L	3268663	3L_3268663_SNP [dm3] 3L_3268663_SNP [dm6]	A	G	3.877e^-4	0.731	SYNONYMOUS_CODING CG34265 DOWNSTREAM ckd
2L	12323565	2L_12323565_SNP [dm3] 2L_12323565_SNP [dm6]	T	C	3.884e^-4	0.731	INTERGENIC
2R	19574014	2R_19574014_SNP [dm3] 2R_23686491_SNP [dm6]	A	C	3.885e^-4	0.731	UPSTREAM l_2_efl INTRON St3	TF binding site mE1_TFBS_cad
X	4476069	X_4476069_SNP [dm3] X_4582036_SNP [dm6]	T	C	3.892e^-4	0.731	INTRON CR32773
3R	23824804	3R_23824804_SNP [dm3] 3R_27999082_SNP [dm6]	C	T	3.894e^-4	0.731	INTERGENIC
3R	2179395	3R_2179395_SNP [dm3] 3R_6353673_SNP [dm6]	T	A	3.899e^-4	0.731	UPSTREAM Pak INTRON Pak	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	2186802	3R_2186802_SNP [dm3] 3R_6361080_SNP [dm6]	A	T	3.899e^-4	0.731	UTR_3_PRIME Pak DOWNSTREAM Pak & 1 other
2L	4297047	2L_4297047_SNP [dm3] 2L_4297047_SNP [dm6]	A	G	3.910e^-4	0.731	INTRON tutl
2L	4297049	2L_4297049_SNP [dm3] 2L_4297049_SNP [dm6]	T	C	3.910e^-4	0.731	INTRON tutl
2L	15140704	2L_15140704_SNP [dm3] 2L_15140704_SNP [dm6]	A	C	3.914e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da
3R	3971353	3R_3971353_SNP [dm3] 3R_8145631_SNP [dm6]	C	T	3.920e^-4	0.731	INTERGENIC
2L	1671705	2L_1671705_SNP [dm3] 2L_1671705_SNP [dm6]	A	G	3.925e^-4	0.731	INTRON chinmo
2R	11747478	2R_11747478_SNP [dm3] 2R_15859973_SNP [dm6]	C	A	3.945e^-4	0.731	INTRON Gpo-1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	23652168	3R_23652168_SNP [dm3] 3R_27826446_SNP [dm6]	G	T	3.949e^-4	0.731	INTRON CG34353	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3L	5053684	3L_5053684_SNP [dm3] 3L_5053684_SNP [dm6]	G	A	3.954e^-4	0.731	INTRON Con
3R	15188163	3R_15188163_SNP [dm3] 3R_19362441_SNP [dm6]	A	C	3.957e^-4	0.731	INTERGENIC
3R	3942329	3R_3942329_SNP [dm3] 3R_8116607_SNP [dm6]	C	T	3.962e^-4	0.731	INTRON puc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	20713549	3R_20713549_SNP [dm3] 3R_24887827_SNP [dm6]	T	A	3.964e^-4	0.731	INTRON CG31121	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	2782372	3L_2782372_SNP [dm3] 3L_2782372_SNP [dm6]	C	T	3.967e^-4	0.731	UTR_5_PRIME pgant6 DOWNSTREAM mRpS35	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
3L	2782538	3L_2782538_SNP [dm3] 3L_2782538_SNP [dm6]	A	G	3.967e^-4	0.731	UTR_5_PRIME pgant6 DOWNSTREAM mRpS35 INTRON pgant6	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Ubx
3L	2783533	3L_2783533_SNP [dm3] 3L_2783533_SNP [dm6]	G	A	3.967e^-4	0.731	INTRON pgant6	TF binding site BDTNP1_TFBS_da
3L	2783577	3L_2783577_DEL [dm3] 3L_2783577_DEL [dm6]	TTTTATTTTCAAAGT...	T	3.967e^-4	0.731	INTRON pgant6
3L	5256511	3L_5256511_SNP [dm3] 3L_5263411_SNP [dm6]	T	C	3.984e^-4	0.731	INTRON shep
2L	9745879	2L_9745879_SNP [dm3] 2L_9745879_SNP [dm6]	G	C	3.993e^-4	0.731	INTRON Nckx30C
X	6781593	X_6781593_SNP [dm3] X_6887560_SNP [dm6]	A	G	3.995e^-4	0.731	INTERGENIC
3L	5891694	3L_5891694_SNP [dm3] 3L_5898594_SNP [dm6]	C	T	4.001e^-4	0.731	UPSTREAM CG32409 INTRON CG5592	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	5891898	3L_5891898_SNP [dm3] 3L_5898798_SNP [dm6]	C	T	4.001e^-4	0.731	SYNONYMOUS_CODING CG5592 UPSTREAM CG32409	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	5891946	3L_5891946_SNP [dm3] 3L_5898846_SNP [dm6]	A	G	4.001e^-4	0.731	SYNONYMOUS_CODING CG5592 UPSTREAM CG32409	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	5891964	3L_5891964_SNP [dm3] 3L_5898864_SNP [dm6]	C	G	4.001e^-4	0.731	SYNONYMOUS_CODING CG5592 UPSTREAM CG32409	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	5891967	3L_5891967_SNP [dm3] 3L_5898867_SNP [dm6]	A	C	4.001e^-4	0.731	SYNONYMOUS_CODING CG5592 UPSTREAM CG32409	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	16101472	2R_16101472_SNP [dm3] 2R_20213967_SNP [dm6]	A	G	4.005e^-4	0.731	INTERGENIC
2L	15859289	2L_15859289_SNP [dm3] 2L_15859289_SNP [dm6]	A	G	4.013e^-4	0.731	INTERGENIC
X	21212178	X_21212178_SNP [dm3] X_21341151_SNP [dm6]	C	T	4.022e^-4	0.731	SYNONYMOUS_CODING fliI	TF binding site mE1_TFBS_chinmo
2L	16975548	2L_16975548_SNP [dm3] 2L_16975548_SNP [dm6]	C	A	4.023e^-4	0.731	INTRON beat-IIIb
2L	16975765	2L_16975765_DEL [dm3] 2L_16975765_DEL [dm6]	TATTG	T	4.023e^-4	0.731	INTRON beat-IIIb
2L	16977111	2L_16977111_DEL [dm3] 2L_16977111_DEL [dm6]	TCATAAGC	T	4.023e^-4	0.731	INTRON beat-IIIb
2L	16977120	2L_16977120_SNP [dm3] 2L_16977120_SNP [dm6]	C	T	4.023e^-4	0.731	INTRON beat-IIIb
2L	8325027	2L_8325027_SNP [dm3] 2L_8325027_SNP [dm6]	T	A	4.030e^-4	0.731	UTR_5_PRIME CG7781
2L	8325895	2L_8325895_SNP [dm3] 2L_8325895_SNP [dm6]	G	A	4.030e^-4	0.731	UPSTREAM CG7781 INTERGENIC
2L	8326801	2L_8326801_INS [dm3] 2L_8326801_INS [dm6]	A	AT	4.030e^-4	0.731	UPSTREAM CG14275 INTERGENIC
2L	10296396	2L_10296396_SNP [dm3] 2L_10296396_SNP [dm6]	C	T	4.037e^-4	0.731	INTRON CYLD	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	14976683	2R_14976683_SNP [dm3] 2R_19089178_SNP [dm6]	T	G	4.050e^-4	0.731	INTRON 5-HT1A
3L	15147593	3L_15147593_SNP [dm3] 3L_15154493_SNP [dm6]	C	T	4.051e^-4	0.731	UTR_3_PRIME Msh6 DOWNSTREAM FucTA
2L	13159800	2L_13159800_SNP [dm3] 2L_13159800_SNP [dm6]	C	T	4.051e^-4	0.731	SYNONYMOUS_CODING Pk34A UPSTREAM CG5204	TF binding site mE1_TFBS_cad
2L	2623817	2L_2623817_SNP [dm3] 2L_2623817_SNP [dm6]	G	C	4.057e^-4	0.731	INTERGENIC
X	21214407	X_21214407_SNP [dm3] X_21343380_SNP [dm6]	G	A	4.065e^-4	0.731	INTRON fliI	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	14494660	X_14494660_SNP [dm3] X_14600627_SNP [dm6]	T	C	4.066e^-4	0.731	INTRON CG9413
2R	5682691	2R_5682691_SNP [dm3] 2R_9795186_SNP [dm6]	C	T	4.082e^-4	0.731	UTR_5_PRIME CG1698 INTRON CG1688 & 1 other	TF binding site mE1_TFBS_cad
3L	3793942	3L_3793942_SNP [dm3] 3L_3793942_SNP [dm6]	T	A	4.083e^-4	0.731	INTRON CG32264
3R	24437621	3R_24437621_SNP [dm3] 3R_28611899_SNP [dm6]	C	A	4.083e^-4	0.731	SYNONYMOUS_CODING CG10011	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	10992926	2L_10992926_SNP [dm3] 2L_10992926_SNP [dm6]	A	C	4.098e^-4	0.731	SPLICE_SITE_REGION CG16833 INTRON CG16833
2R	10670569	2R_10670569_SNP [dm3] 2R_14783064_SNP [dm6]	G	T	4.100e^-4	0.731	INTRON kn
X	5472095	X_5472095_SNP [dm3] X_5578062_SNP [dm6]	A	G	4.103e^-4	0.731	INTERGENIC
3L	5256441	3L_5256441_SNP [dm3] 3L_5263341_SNP [dm6]	G	T	4.108e^-4	0.731	INTRON shep
X	15644017	X_15644017_SNP [dm3] X_15749984_SNP [dm6]	C	T	4.110e^-4	0.731	INTRON CG8239
3L	10607629	3L_10607629_SNP [dm3] 3L_10614529_SNP [dm6]	T	A	4.113e^-4	0.731	INTERGENIC
2L	4193746	2L_4193746_SNP [dm3] 2L_4193746_SNP [dm6]	C	A	4.114e^-4	0.731	INTRON CG3714	TF binding site mE1_TFBS_h mE1_TFBS_HSA
3R	6972279	3R_6972279_SNP [dm3] 3R_11146557_SNP [dm6]	T	A	4.117e^-4	0.731	INTERGENIC
3R	23526187	3R_23526187_SNP [dm3] 3R_27700465_SNP [dm6]	G	A	4.123e^-4	0.731	SPLICE_SITE_ACCEPTOR btz UTR_5_PRIME btz UPSTREAM ALiX INTRON btz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2R	14225537	2R_14225537_SNP [dm3] 2R_18338032_SNP [dm6]	A	G	4.133e^-4	0.731	INTRON sbb	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	10250446	2R_10250446_SNP [dm3] 2R_14362941_SNP [dm6]	C	A	4.142e^-4	0.731	UPSTREAM Tfb1 DOWNSTREAM Arc2 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	3942847	3L_3942847_SNP [dm3] 3L_3942847_SNP [dm6]	G	C	4.143e^-4	0.731	UTR_5_PRIME CG14982 UPSTREAM CG14982 & 1 other
2L	5392900	2L_5392900_SNP [dm3] 2L_5392900_SNP [dm6]	C	T	4.146e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
X	8441181	X_8441181_SNP [dm3] X_8547148_SNP [dm6]	C	T	4.156e^-4	0.731	SYNONYMOUS_CODING Nrg	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	8363832	2L_8363832_SNP [dm3] 2L_8363832_SNP [dm6]	G	A	4.158e^-4	0.731	SYNONYMOUS_CODING RpS13	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_sens
2R	20140715	2R_20140715_SNP [dm3] 2R_24253192_SNP [dm6]	T	G	4.162e^-4	0.731	NON_SYNONYMOUS_CODING nord	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	14766251	X_14766251_SNP [dm3] X_14872218_SNP [dm6]	G	A	4.167e^-4	0.731	INTRON Flo2
3R	19174218	3R_19174218_SNP [dm3] 3R_23348496_SNP [dm6]	G	A	4.167e^-4	0.731	INTRON DNApol-epsilon	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_sens
3R	26320493	3R_26320493_SNP [dm3] 3R_30494771_SNP [dm6]	C	T	4.174e^-4	0.731	INTRON PH4alphaMP	TF binding site mE1_TFBS_inv
2R	4730683	2R_4730683_SNP [dm3] 2R_8843178_SNP [dm6]	T	A	4.176e^-4	0.731	NON_SYNONYMOUS_CODING sns	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	4730684	2R_4730684_SNP [dm3] 2R_8843179_SNP [dm6]	C	T	4.176e^-4	0.731	SYNONYMOUS_CODING sns	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	2783069	3R_2783069_SNP [dm3] 3R_6957347_SNP [dm6]	T	C	4.181e^-4	0.731	INTRON Antp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	14426416	2R_14426416_SNP [dm3] 2R_18538911_SNP [dm6]	C	T	4.183e^-4	0.731	SYNONYMOUS_CODING Pepck UTR_3_PRIME CG45087 UPSTREAM Rgk2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
X	16049401	X_16049401_SNP [dm3] X_16155368_SNP [dm6]	A	G	4.186e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
X	21315818	X_21315818_SNP [dm3] X_21444791_SNP [dm6]	C	T	4.197e^-4	0.731	INTRON CG42343
X	21315835	X_21315835_SNP [dm3] X_21444808_SNP [dm6]	G	T	4.197e^-4	0.731	INTRON CG42343
3L	2114532	3L_2114532_SNP [dm3] 3L_2114532_SNP [dm6]	T	G	4.214e^-4	0.731	INTRON sls
2L	8780202	2L_8780202_SNP [dm3] 2L_8780202_SNP [dm6]	G	A	4.223e^-4	0.731	SYNONYMOUS_CODING CG9468	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	11200507	X_11200507_SNP [dm3] X_11306474_SNP [dm6]	C	T	4.227e^-4	0.731	INTERGENIC
X	4475991	X_4475991_INS [dm3] X_4581958_INS [dm6]	T	AA	4.242e^-4	0.731	INTRON CR32773
2L	3848587	2L_3848587_SNP [dm3] 2L_3848587_SNP [dm6]	A	G	4.257e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	15141700	2L_15141700_SNP [dm3] 2L_15141700_SNP [dm6]	C	G	4.259e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	10670474	2R_10670474_SNP [dm3] 2R_14782969_SNP [dm6]	G	T	4.262e^-4	0.731	INTRON kn
X	19379700	X_19379700_SNP [dm3] X_19485667_SNP [dm6]	A	C	4.268e^-4	0.731	UPSTREAM CR43260 DOWNSTREAM pcm INTERGENIC
3L	4364757	3L_4364757_SNP [dm3] 3L_4364757_SNP [dm6]	A	G	4.270e^-4	0.731	UPSTREAM Cip4 & 1 other INTRON mRpS6	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3R	22541817	3R_22541817_DEL [dm3] 3R_26716095_DEL [dm6]	TGAC	T	4.280e^-4	0.731	INTRON CG6425	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	3210908	X_3210908_SNP [dm3] X_3316875_SNP [dm6]	C	T	4.283e^-4	0.731	UPSTREAM CG10793 INTRON dnc & 1 other
2L	3864036	2L_3864036_SNP [dm3] 2L_3864036_SNP [dm6]	C	T	4.286e^-4	0.731	SYNONYMOUS_CODING CG3964	TF binding site BDTNP1_TFBS_sna
3L	4491236	3L_4491236_SNP [dm3] 3L_4491236_SNP [dm6]	T	A	4.288e^-4	0.731	UPSTREAM CG13722 INTERGENIC
3R	10499978	3R_10499978_SNP [dm3] 3R_14674256_SNP [dm6]	A	G	4.294e^-4	0.731	INTRON Meltrin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	4253073	2L_4253073_INS [dm3] 2L_4253073_INS [dm6]	T	TGT	4.294e^-4	0.731	INTERGENIC
2L	16896312	2L_16896312_SNP [dm3] 2L_16896312_SNP [dm6]	C	T	4.297e^-4	0.731	SYNONYMOUS_CODING tweek
X	17190966	X_17190966_SNP [dm3] X_17296933_SNP [dm6]	T	C	4.308e^-4	0.731	INTRON CG5445 & 1 other	TF binding site BDTNP1_TFBS_dl
2L	7332883	2L_7332883_SNP [dm3] 2L_7332883_SNP [dm6]	G	A	4.312e^-4	0.731	UPSTREAM Wnt6 INTERGENIC
2L	7332914	2L_7332914_SNP [dm3] 2L_7332914_SNP [dm6]	T	A	4.312e^-4	0.731	UPSTREAM Wnt6 INTERGENIC
2L	13739590	2L_13739590_SNP [dm3] 2L_13739590_SNP [dm6]	A	G	4.313e^-4	0.731	INTERGENIC
2L	6499760	2L_6499760_SNP [dm3] 2L_6499760_SNP [dm6]	G	A	4.317e^-4	0.731	SYNONYMOUS_CODING CG31637	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	9991562	2L_9991562_SNP [dm3] 2L_9991562_SNP [dm6]	T	A	4.319e^-4	0.731	INTRON bib	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8754712	3L_8754712_SNP [dm3] 3L_8761612_SNP [dm6]	A	G	4.327e^-4	0.731	NON_SYNONYMOUS_CODING Fhos UTR_5_PRIME Fhos	TF binding site mE1_TFBS_inv
3L	8754838	3L_8754838_SNP [dm3] 3L_8761738_SNP [dm6]	A	C	4.327e^-4	0.731	SYNONYMOUS_CODING Fhos	TF binding site mE1_TFBS_inv
X	5007365	X_5007365_SNP [dm3] X_5113332_SNP [dm6]	G	T	4.331e^-4	0.731	INTRON rg & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	23721070	3R_23721070_SNP [dm3] 3R_27895348_SNP [dm6]	T	A	4.343e^-4	0.731	INTRON CG34353
2R	14793257	2R_14793257_SNP [dm3] 2R_18905752_SNP [dm6]	T	A	4.347e^-4	0.731	INTRON sano
3R	23526729	3R_23526729_SNP [dm3] 3R_27701007_SNP [dm6]	A	C	4.348e^-4	0.731	SYNONYMOUS_CODING btz UPSTREAM ALiX	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	11371798	2L_11371798_SNP [dm3] 2L_11371798_SNP [dm6]	A	G	4.349e^-4	0.731	INTRON salr	TF binding site mE1_TFBS_chinmo
2L	5705196	2L_5705196_SNP [dm3] 2L_5705196_SNP [dm6]	G	A	4.351e^-4	0.731	INTERGENIC
2L	5705197	2L_5705197_SNP [dm3] 2L_5705197_SNP [dm6]	A	G	4.351e^-4	0.731	INTERGENIC
3L	20288466	3L_20288466_SNP [dm3] 3L_20295366_SNP [dm6]	C	G	4.355e^-4	0.731	UPSTREAM gogo DOWNSTREAM FRG1 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	15612297	X_15612297_SNP [dm3] X_15718264_SNP [dm6]	A	T	4.358e^-4	0.731	SYNONYMOUS_CODING CG8184	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
X	15612318	X_15612318_SNP [dm3] X_15718285_SNP [dm6]	G	A	4.358e^-4	0.731	SYNONYMOUS_CODING CG8184	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
X	15612330	X_15612330_SNP [dm3] X_15718297_SNP [dm6]	A	G	4.358e^-4	0.731	SYNONYMOUS_CODING CG8184	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
X	15612388	X_15612388_SNP [dm3] X_15718355_SNP [dm6]	C	A	4.358e^-4	0.731	SYNONYMOUS_CODING CG8184	TF binding site mE1_TFBS_sens
2R	10986599	2R_10986599_SNP [dm3] 2R_15099094_SNP [dm6]	T	G	4.359e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2L	9074548	2L_9074548_DEL [dm3] 2L_9074548_DEL [dm6]	GTCCCGAG	G	4.360e^-4	0.731	INTERGENIC
X	15101247	X_15101247_SNP [dm3] X_15207214_SNP [dm6]	G	A	4.374e^-4	0.731	UPSTREAM CG32588 INTERGENIC
2R	8513498	2R_8513498_SNP [dm3] 2R_12625993_SNP [dm6]	A	G	4.378e^-4	0.731	START_GAINED CG17760 UTR_5_PRIME CG17760 DOWNSTREAM CG30054
2R	20498819	2R_20498819_SNP [dm3] 2R_24611296_SNP [dm6]	G	T	4.384e^-4	0.731	UPSTREAM CG3608 DOWNSTREAM CG42360 INTRON CG4741	TF binding site mE1_TFBS_HSA mE1_TFBS_Ubx
3L	16361100	3L_16361100_SNP [dm3] 3L_16368000_SNP [dm6]	A	G	4.391e^-4	0.731	UPSTREAM Cpr72Ec & 1 other INTERGENIC
3R	20414550	3R_20414550_SNP [dm3] 3R_24588828_SNP [dm6]	A	G	4.391e^-4	0.731	UPSTREAM mld INTRON mld	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Trl
2R	10406271	2R_10406271_SNP [dm3] 2R_14518766_SNP [dm6]	C	A	4.392e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10406280	2R_10406280_SNP [dm3] 2R_14518775_SNP [dm6]	A	T	4.392e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2077986	2L_2077986_SNP [dm3] 2L_2077986_SNP [dm6]	A	C	4.392e^-4	0.731	INTRON dpr3
2L	2077996	2L_2077996_SNP [dm3] 2L_2077996_SNP [dm6]	A	T	4.392e^-4	0.731	INTRON dpr3
3L	17733232	3L_17733232_SNP [dm3] 3L_17740132_SNP [dm6]	G	A	4.401e^-4	0.731	UPSTREAM CG7460 INTRON Ccn	TF binding site BDTNP1_TFBS_dl
3L	17733234	3L_17733234_SNP [dm3] 3L_17740134_SNP [dm6]	A	T	4.401e^-4	0.731	UPSTREAM CG7460 INTRON Ccn	TF binding site BDTNP1_TFBS_dl
2R	18898047	2R_18898047_SNP [dm3] 2R_23010524_SNP [dm6]	G	A	4.406e^-4	0.731	DOWNSTREAM CG42741 INTRON twi	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	16776237	X_16776237_SNP [dm3] X_16882204_SNP [dm6]	T	C	4.418e^-4	0.731	SYNONYMOUS_CODING CG4872 DOWNSTREAM CG9104	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	3189469	3L_3189469_SNP [dm3] 3L_3189469_SNP [dm6]	C	T	4.423e^-4	0.731	SYNONYMOUS_CODING CG42525 UPSTREAM CG14958	TF binding site mE1_TFBS_sens
3R	21772160	3R_21772160_SNP [dm3] 3R_25946438_SNP [dm6]	T	G	4.425e^-4	0.731	INTRON CCAP-R
3L	5334800	3L_5334800_SNP [dm3] 3L_5341700_SNP [dm6]	C	T	4.426e^-4	0.731	UPSTREAM tRNA:S7:64D INTERGENIC
3L	3793989	3L_3793989_SNP [dm3] 3L_3793989_SNP [dm6]	T	A	4.431e^-4	0.731	INTRON CG32264
3L	8583848	3L_8583848_SNP [dm3] 3L_8590748_SNP [dm6]	G	T	4.434e^-4	0.731	SYNONYMOUS_CODING CG43078 INTRON CG43078	TF binding site mE1_TFBS_chinmo
X	15823944	X_15823944_SNP [dm3] X_15929911_SNP [dm6]	G	A	4.447e^-4	0.731	SYNONYMOUS_CODING Ranbp16
X	22335193	X_22335193_SNP [dm3] X_22933357_SNP [dm6]	A	G	4.457e^-4	0.731	INTERGENIC	transposable element FlyBase
X	22335195	X_22335195_SNP [dm3] X_22933359_SNP [dm6]	A	G	4.457e^-4	0.731	INTERGENIC	transposable element FlyBase
X	22335201	X_22335201_DEL [dm3] X_22933365_DEL [dm6]	TA	C	4.457e^-4	0.731	INTERGENIC	transposable element FlyBase
X	22335306	X_22335306_SNP [dm3] X_22933470_SNP [dm6]	C	T	4.457e^-4	0.731	INTERGENIC	transposable element FlyBase
3R	19174189	3R_19174189_SNP [dm3] 3R_23348467_SNP [dm6]	T	C	4.462e^-4	0.731	INTRON DNApol-epsilon	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_sens
3R	19174201	3R_19174201_SNP [dm3] 3R_23348479_SNP [dm6]	A	C	4.462e^-4	0.731	INTRON DNApol-epsilon	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_sens
3R	19174203	3R_19174203_SNP [dm3] 3R_23348481_SNP [dm6]	T	A	4.462e^-4	0.731	INTRON DNApol-epsilon	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_sens
2L	10345855	2L_10345855_SNP [dm3] 2L_10345855_SNP [dm6]	C	T	4.463e^-4	0.731	SYNONYMOUS_CODING CG5022
2L	8884551	2L_8884551_SNP [dm3] 2L_8884551_SNP [dm6]	A	G	4.464e^-4	0.731	INTERGENIC
3R	13659057	3R_13659057_SNP [dm3] 3R_17833335_SNP [dm6]	C	A	4.465e^-4	0.731	INTRON tinc	TF binding site BDTNP1_TFBS_dl
3R	13659058	3R_13659058_SNP [dm3] 3R_17833336_SNP [dm6]	A	G	4.465e^-4	0.731	INTRON tinc	TF binding site BDTNP1_TFBS_dl
2L	4253078	2L_4253078_SNP [dm3] 2L_4253078_SNP [dm6]	G	A	4.469e^-4	0.731	INTERGENIC
2L	17516116	2L_17516116_SNP [dm3] 2L_17516116_SNP [dm6]	C	A	4.469e^-4	0.731	INTRON Dhc36C	TF binding site BDTNP1_TFBS_twi
X	21238658	X_21238658_SNP [dm3] X_21367631_SNP [dm6]	C	G	4.471e^-4	0.731	UPSTREAM bbx INTRON waw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_Trl
X	21246579	X_21246579_SNP [dm3] X_21375552_SNP [dm6]	G	T	4.471e^-4	0.731	UPSTREAM slgA INTRON slgA	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt
2R	17069145	2R_17069145_SNP [dm3] 2R_21181640_SNP [dm6]	C	A	4.476e^-4	0.731	SPLICE_SITE_REGION Pu DOWNSTREAM tRNA:CR33539 INTRON Pu	TF binding site mE1_TFBS_HSA
3L	15147543	3L_15147543_SNP [dm3] 3L_15154443_SNP [dm6]	A	G	4.480e^-4	0.731	UTR_3_PRIME Msh6 DOWNSTREAM FucTA
3L	15147566	3L_15147566_SNP [dm3] 3L_15154466_SNP [dm6]	A	T	4.480e^-4	0.731	UTR_3_PRIME Msh6 DOWNSTREAM FucTA
3R	24544985	3R_24544985_SNP [dm3] 3R_28719263_SNP [dm6]	A	C	4.486e^-4	0.731	INTRON htt	TF binding site mE1_TFBS_chinmo
2L	15427717	2L_15427717_SNP [dm3] 2L_15427717_SNP [dm6]	C	A	4.491e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	10478152	3L_10478152_SNP [dm3] 3L_10485052_SNP [dm6]	C	G	4.497e^-4	0.731	INTRON A2bp1
2L	5628288	2L_5628288_SNP [dm3] 2L_5628288_SNP [dm6]	T	C	4.498e^-4	0.731	INTRON CG31646	TF binding site BDTNP1_TFBS_twi
2R	10317466	2R_10317466_SNP [dm3] 2R_14429961_SNP [dm6]	T	C	4.502e^-4	0.731	INTRON phyl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	13479410	X_13479410_SNP [dm3] X_13585377_SNP [dm6]	A	T	4.514e^-4	0.731	INTRON Tango13
3R	26089582	3R_26089582_SNP [dm3] 3R_30263860_SNP [dm6]	T	A	4.530e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	26089584	3R_26089584_MNP [dm3] 3R_30263862_MNP [dm6]	ATA	TAT	4.530e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	26089593	3R_26089593_SNP [dm3] 3R_30263871_SNP [dm6]	A	T	4.530e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	26089610	3R_26089610_SNP [dm3] 3R_30263888_SNP [dm6]	A	T	4.530e^-4	0.731	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	10604785	3L_10604785_SNP [dm3] 3L_10611685_SNP [dm6]	A	G	4.532e^-4	0.731	INTERGENIC

Missing results

By genomic position
Variant impact
Gene name

pc_FLCN_Hobo_HC phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results