©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Covariate | χ2 | p-value | Significance |
---|---|---|---|
In_3R_Mo | 6.0845 | 0.0477 |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2R | 16665002 | 2R_16665002_SNP [dm3] 2R_20777497_SNP [dm6] | G | A | 1.052e-7 | 0.197 |
NON_SYNONYMOUS_CODING
CG43710 DOWNSTREAM CG43711 |
||
2R | 16664864 | 2R_16664864_SNP [dm3] 2R_20777359_SNP [dm6] | G | A | 1.605e-6 | 0.889 |
NON_SYNONYMOUS_CODING
CG43710 UPSTREAM CG43709 DOWNSTREAM CG43711 |
||
3R | 25019909 | 3R_25019909_SNP [dm3] 3R_29194187_SNP [dm6] | A | G | 3.024e-6 | 0.889 |
INTRON
CG14509 |
||
3R | 10927978 | 3R_10927978_SNP [dm3] 3R_15102256_SNP [dm6] | C | G | 3.384e-6 | 0.889 |
INTRON
CG42788 |
||
3L | 15660911 | 3L_15660911_SNP [dm3] 3L_15667811_SNP [dm6] | C | A | 3.450e-6 | 0.889 |
INTERGENIC
|
||
3R | 13345288 | 3R_13345288_SNP [dm3] 3R_17519566_SNP [dm6] | G | A | 3.510e-6 | 0.889 |
UPSTREAM
CR44349 INTERGENIC |
||
3R | 13045083 | 3R_13045083_SNP [dm3] 3R_17219361_SNP [dm6] | C | T | 3.595e-6 | 0.889 |
SYNONYMOUS_CODING
CG31262 |
||
X | 5599519 | X_5599519_SNP [dm3] X_5705486_SNP [dm6] | A | T | 3.790e-6 | 0.889 |
INTRON
CG4096 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_run
|
|
3R | 13345176 | 3R_13345176_SNP [dm3] 3R_17519454_SNP [dm6] | A | C | 5.511e-6 | 0.929 |
UPSTREAM
CR44349 INTERGENIC |
||
3L | 4337857 | 3L_4337857_SNP [dm3] 3L_4337857_SNP [dm6] | A | G | 5.648e-6 | 0.929 |
INTRON
Cip4 |
||
3R | 14679036 | 3R_14679036_SNP [dm3] 3R_18853314_SNP [dm6] | A | C | 6.064e-6 | 0.929 |
INTERGENIC
|
||
X | 5746480 | X_5746480_SNP [dm3] X_5852447_SNP [dm6] | A | G | 7.612e-6 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
2L | 11939564 | 2L_11939564_SNP [dm3] 2L_11939564_SNP [dm6] | G | A | 8.218e-6 | 0.929 |
DOWNSTREAM
Or33c INTERGENIC |
||
2L | 6844325 | 2L_6844325_SNP [dm3] 2L_6844325_SNP [dm6] | A | G | 9.363e-6 | 0.929 |
INTERGENIC
|
||
3R | 13045071 | 3R_13045071_SNP [dm3] 3R_17219349_SNP [dm6] | G | A | 9.583e-6 | 0.929 |
SYNONYMOUS_CODING
CG31262 |
||
3R | 16302386 | 3R_16302386_SNP [dm3] 3R_20476664_SNP [dm6] | C | G | 9.655e-6 | 0.929 |
INTRON
Gfrl |
||
3R | 9900608 | 3R_9900608_SNP [dm3] 3R_14074886_SNP [dm6] | A | G | 1.114e-5 | 0.929 |
INTRON
foxo |
||
2R | 2495968 | 2R_2495968_DEL [dm3] 2R_6608463_DEL [dm6] | CCACATACGCAAAC... | C | 1.122e-5 | 0.929 |
INTRON
jing |
insulator
Insulator_Class_II.mE01
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl |
|
2R | 11948886 | 2R_11948886_SNP [dm3] 2R_16061381_SNP [dm6] | T | C | 1.281e-5 | 0.929 |
DOWNSTREAM
CG8405 INTERGENIC |
||
3L | 5782179 | 3L_5782179_SNP [dm3] 3L_5789079_SNP [dm6] | A | C | 1.300e-5 | 0.929 |
DOWNSTREAM
Bre1 INTERGENIC |
||
2R | 10568729 | 2R_10568729_SNP [dm3] 2R_14681224_SNP [dm6] | A | G | 1.349e-5 | 0.929 |
INTRON
mspo |
||
2L | 11789804 | 2L_11789804_SNP [dm3] 2L_11789804_SNP [dm6] | A | G | 1.460e-5 | 0.929 |
UPSTREAM
CG14932 DOWNSTREAM CG14931 INTERGENIC |
||
3L | 16722891 | 3L_16722891_SNP [dm3] 3L_16729791_SNP [dm6] | C | T | 1.509e-5 | 0.929 |
INTRON
Dbp73D |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 14943930 | 3L_14943930_SNP [dm3] 3L_14950830_SNP [dm6] | A | G | 1.560e-5 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3R | 13345180 | 3R_13345180_SNP [dm3] 3R_17519458_SNP [dm6] | T | C | 1.631e-5 | 0.929 |
UPSTREAM
CR44349 INTERGENIC |
||
3R | 16307019 | 3R_16307019_SNP [dm3] 3R_20481297_SNP [dm6] | A | G | 1.781e-5 | 0.929 |
UTR_5_PRIME
Gfrl INTRON Gfrl |
||
X | 3320777 | X_3320777_SNP [dm3] X_3426744_SNP [dm6] | C | G | 1.796e-5 | 0.929 |
DOWNSTREAM
tRNA:CR32493 INTRON CR44999 & 1 other |
TF binding site
BDTNP1_TFBS_dl
|
|
X | 5599341 | X_5599341_SNP [dm3] X_5705308_SNP [dm6] | T | C | 1.853e-5 | 0.929 |
INTRON
CG4096 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_run
|
|
3R | 25019888 | 3R_25019888_SNP [dm3] 3R_29194166_SNP [dm6] | T | G | 2.075e-5 | 0.929 |
INTRON
CG14509 |
||
X | 8349240 | X_8349240_SNP [dm3] X_8455207_SNP [dm6] | C | T | 2.088e-5 | 0.929 |
UPSTREAM
org-1 INTERGENIC |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA |
|
3L | 17721049 | 3L_17721049_SNP [dm3] 3L_17727949_SNP [dm6] | A | G | 2.110e-5 | 0.929 |
SYNONYMOUS_CODING
CG6052 INTRON Ccn |
TF binding site
mE1_TFBS_HSA mE1_TFBS_inv
|
|
3R | 18681169 | 3R_18681169_SNP [dm3] 3R_22855447_SNP [dm6] | T | A | 2.137e-5 | 0.929 |
INTERGENIC
|
||
2L | 11789798 | 2L_11789798_SNP [dm3] 2L_11789798_SNP [dm6] | A | G | 2.210e-5 | 0.929 |
UPSTREAM
CG14932 DOWNSTREAM CG14931 INTERGENIC |
||
X | 12319601 | X_12319601_SNP [dm3] X_12425568_SNP [dm6] | A | G | 2.231e-5 | 0.929 |
INTERGENIC
|
||
3L | 4337733 | 3L_4337733_INS [dm3] 3L_4337733_INS [dm6] | A | GG | 2.493e-5 | 0.929 |
INTRON
Cip4 |
||
3R | 17828710 | 3R_17828710_SNP [dm3] 3R_22002988_SNP [dm6] | A | C | 2.545e-5 | 0.929 |
INTRON
Eip93F |
||
2L | 14590330 | 2L_14590330_SNP [dm3] 2L_14590330_SNP [dm6] | T | C | 2.551e-5 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3L | 15385404 | 3L_15385404_SNP [dm3] 3L_15392304_SNP [dm6] | A | T | 3.015e-5 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
2L | 14415764 | 2L_14415764_SNP [dm3] 2L_14415764_SNP [dm6] | G | A | 3.143e-5 | 0.929 |
DOWNSTREAM
Pburs INTERGENIC |
TF binding site
BDTNP1_TFBS_twi
|
|
3R | 21742611 | 3R_21742611_SNP [dm3] 3R_25916889_SNP [dm6] | A | T | 3.218e-5 | 0.929 |
NON_SYNONYMOUS_CODING
CG42235 INTRON CG42235 |
||
3R | 14042424 | 3R_14042424_SNP [dm3] 3R_18216702_SNP [dm6] | A | G | 3.296e-5 | 0.929 |
INTRON
CG14314 |
TF binding site
mE1_TFBS_cad
|
|
3L | 16722875 | 3L_16722875_SNP [dm3] 3L_16729775_SNP [dm6] | G | T | 3.304e-5 | 0.929 |
SPLICE_SITE_REGION
Dbp73D SYNONYMOUS_CODING Dbp73D |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 17720959 | 3L_17720959_SNP [dm3] 3L_17727859_SNP [dm6] | A | G | 3.330e-5 | 0.929 |
SYNONYMOUS_CODING
CG6052 INTRON Ccn |
TF binding site
mE1_TFBS_HSA mE1_TFBS_inv
|
|
X | 13373610 | X_13373610_SNP [dm3] X_13479577_SNP [dm6] | A | C | 3.428e-5 | 0.929 |
INTRON
Neto |
||
2L | 19224096 | 2L_19224096_SNP [dm3] 2L_19224096_SNP [dm6] | C | T | 3.460e-5 | 0.929 |
INTERGENIC
|
||
3L | 1276160 | 3L_1276160_SNP [dm3] 3L_1276160_SNP [dm6] | A | G | 3.490e-5 | 0.929 |
UTR_5_PRIME
CG32333 |
TF binding site
mE1_TFBS_Trl
|
|
X | 19178888 | X_19178888_SNP [dm3] X_19284855_SNP [dm6] | G | A | 3.628e-5 | 0.929 |
UPSTREAM
CG8034 INTRON CG8034 |
TF binding site
mE1_TFBS_chinmo
|
|
X | 19178898 | X_19178898_SNP [dm3] X_19284865_SNP [dm6] | G | A | 3.628e-5 | 0.929 |
UPSTREAM
CG8034 INTRON CG8034 |
TF binding site
mE1_TFBS_chinmo
|
|
X | 19178925 | X_19178925_INS [dm3] X_19284892_INS [dm6] | A | ATCGACACTA | 3.628e-5 | 0.929 |
UPSTREAM
CG8034 INTRON CG8034 |
TF binding site
mE1_TFBS_chinmo
|
|
3L | 11184232 | 3L_11184232_SNP [dm3] 3L_11191132_SNP [dm6] | T | C | 3.661e-5 | 0.929 |
INTRON
GlcAT-P |
||
3L | 15660667 | 3L_15660667_SNP [dm3] 3L_15667567_SNP [dm6] | G | A | 3.713e-5 | 0.929 |
INTERGENIC
|
||
X | 20472553 | X_20472553_SNP [dm3] X_20601526_SNP [dm6] | A | G | 3.740e-5 | 0.929 |
INTRON
RunxA |
||
2L | 21355857 | 2L_21355857_SNP [dm3] 2L_21355857_SNP [dm6] | C | T | 3.836e-5 | 0.929 |
INTRON
Tsp39D |
||
3L | 17163163 | 3L_17163163_SNP [dm3] 3L_17170063_SNP [dm6] | A | T | 3.895e-5 | 0.929 |
INTRON
Rbp6 |
||
3R | 13345303 | 3R_13345303_SNP [dm3] 3R_17519581_SNP [dm6] | G | C | 3.931e-5 | 0.929 |
UPSTREAM
CR44349 INTERGENIC |
||
X | 19178936 | X_19178936_SNP [dm3] X_19284903_SNP [dm6] | C | T | 3.968e-5 | 0.929 |
UPSTREAM
CG8034 INTRON CG8034 |
||
3R | 11270162 | 3R_11270162_SNP [dm3] 3R_15444440_SNP [dm6] | G | A | 4.023e-5 | 0.929 |
SYNONYMOUS_CODING
AdamTS-A |
TF binding site
mE1_TFBS_cad
|
|
2L | 19799210 | 2L_19799210_SNP [dm3] 2L_19799210_SNP [dm6] | A | T | 4.243e-5 | 0.929 |
INTRON
sick |
||
X | 17561219 | X_17561219_SNP [dm3] X_17667186_SNP [dm6] | T | C | 4.400e-5 | 0.929 |
SYNONYMOUS_CODING
beta-Spec |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2R | 3259139 | 2R_3259139_SNP [dm3] 2R_7371634_SNP [dm6] | C | G | 4.436e-5 | 0.929 |
INTRON
Dscam1 |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens |
|
2L | 19869083 | 2L_19869083_SNP [dm3] 2L_19869083_SNP [dm6] | C | T | 4.510e-5 | 0.929 |
INTRON
sick |
TF binding site
BDTNP1_TFBS_da mE1_TFBS_D mE1_TFBS_HSA
|
|
3R | 9904999 | 3R_9904999_SNP [dm3] 3R_14079277_SNP [dm6] | A | T | 4.896e-5 | 0.929 |
INTRON
foxo |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 21708549 | 3R_21708549_SNP [dm3] 3R_25882827_SNP [dm6] | T | A | 4.935e-5 | 0.929 |
INTRON
SppL |
TF binding site
BDTNP1_TFBS_dl
|
|
X | 10815196 | X_10815196_SNP [dm3] X_10921163_SNP [dm6] | G | T | 4.939e-5 | 0.929 |
UTR_3_PRIME
CG43901 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
2L | 14590313 | 2L_14590313_SNP [dm3] 2L_14590313_SNP [dm6] | T | A | 5.018e-5 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3L | 12677017 | 3L_12677017_SNP [dm3] 3L_12683917_SNP [dm6] | T | A | 5.029e-5 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3L | 10102597 | 3L_10102597_SNP [dm3] 3L_10109497_SNP [dm6] | C | A | 5.127e-5 | 0.929 |
INTRON
dpr6 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sbb
|
|
2L | 1444778 | 2L_1444778_SNP [dm3] 2L_1444778_SNP [dm6] | G | T | 5.165e-5 | 0.929 |
DOWNSTREAM
CG43402 INTERGENIC |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3R | 2167567 | 3R_2167567_SNP [dm3] 3R_6341845_SNP [dm6] | T | C | 5.176e-5 | 0.929 |
UPSTREAM
CG17917 DOWNSTREAM Osi20 INTERGENIC |
||
3L | 16723588 | 3L_16723588_SNP [dm3] 3L_16730488_SNP [dm6] | A | C | 5.195e-5 | 0.929 |
NON_SYNONYMOUS_CODING
Dbp73D |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 2169358 | 3L_2169358_DEL [dm3] 3L_2169358_DEL [dm6] | TT | T | 5.225e-5 | 0.929 |
UPSTREAM
CG15879 DOWNSTREAM CG5704 INTERGENIC |
||
3R | 13045227 | 3R_13045227_SNP [dm3] 3R_17219505_SNP [dm6] | C | T | 5.249e-5 | 0.929 |
INTRON
CG31262 |
||
2L | 2048038 | 2L_2048038_SNP [dm3] 2L_2048038_SNP [dm6] | A | G | 5.282e-5 | 0.929 |
UTR_3_PRIME
Kebab DOWNSTREAM Kebab |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2R | 5291760 | 2R_5291760_SNP [dm3] 2R_9404255_SNP [dm6] | T | C | 5.379e-5 | 0.929 |
INTRON
wun |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 11089930 | 3R_11089930_SNP [dm3] 3R_15264208_SNP [dm6] | A | C | 5.522e-5 | 0.929 |
UPSTREAM
Su_var_3-9 & 1 other INTRON Set |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
|
|
X | 15154121 | X_15154121_SNP [dm3] X_15260088_SNP [dm6] | C | A | 5.552e-5 | 0.929 |
INTERGENIC
|
||
X | 2831578 | X_2831578_SNP [dm3] X_2937545_SNP [dm6] | G | A | 5.816e-5 | 0.929 |
NON_SYNONYMOUS_CODING
CG3598 INTRON kirre |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3R | 16977130 | 3R_16977130_SNP [dm3] 3R_21151408_SNP [dm6] | G | A | 5.889e-5 | 0.929 |
INTRON
SNF4Agamma |
||
2L | 19799209 | 2L_19799209_SNP [dm3] 2L_19799209_SNP [dm6] | A | T | 5.894e-5 | 0.929 |
INTRON
sick |
||
2L | 14590987 | 2L_14590987_SNP [dm3] 2L_14590987_SNP [dm6] | T | A | 5.995e-5 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2L | 19225415 | 2L_19225415_SNP [dm3] 2L_19225415_SNP [dm6] | A | C | 6.151e-5 | 0.929 |
INTERGENIC
|
||
3L | 15609564 | 3L_15609564_INS [dm3] 3L_15616464_INS [dm6] | A | AA | 6.196e-5 | 0.929 |
INTRON
comm3 |
||
3R | 2048107 | 3R_2048107_SNP [dm3] 3R_6222385_SNP [dm6] | C | A | 6.239e-5 | 0.929 |
UPSTREAM
Osi4 INTERGENIC |
TF binding site
mE1_TFBS_cad
|
|
2L | 17663805 | 2L_17663805_SNP [dm3] 2L_17663805_SNP [dm6] | G | A | 6.311e-5 | 0.929 |
INTRON
CadN |
||
2L | 14590323 | 2L_14590323_MNP [dm3] 2L_14590323_MNP [dm6] | CAAGT | TTTCA | 6.314e-5 | 0.929 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3L | 2180898 | 3L_2180898_SNP [dm3] 3L_2180898_SNP [dm6] | A | C | 6.339e-5 | 0.929 |
INTERGENIC
|
||
2L | 7183468 | 2L_7183468_SNP [dm3] 2L_7183468_SNP [dm6] | A | C | 6.415e-5 | 0.929 |
INTRON
CG4495 |
TF binding site
BDTNP1_TFBS_twi
|
|
2L | 12088471 | 2L_12088471_SNP [dm3] 2L_12088471_SNP [dm6] | C | T | 6.499e-5 | 0.929 |
DOWNSTREAM
CR44593 INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad |
|
X | 10814890 | X_10814890_SNP [dm3] X_10920857_SNP [dm6] | A | T | 6.513e-5 | 0.929 |
UTR_3_PRIME
CG43901 |
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 10500558 | 2L_10500558_SNP [dm3] 2L_10500558_SNP [dm6] | C | T | 6.572e-5 | 0.929 |
INTRON
Myo31DF |
||
X | 12404884 | X_12404884_SNP [dm3] X_12510851_SNP [dm6] | A | C | 6.583e-5 | 0.929 |
INTRON
CG2556 |
||
3R | 13345207 | 3R_13345207_SNP [dm3] 3R_17519485_SNP [dm6] | C | A | 6.606e-5 | 0.929 |
UPSTREAM
CR44349 INTERGENIC |
||
3L | 2757914 | 3L_2757914_SNP [dm3] 3L_2757914_SNP [dm6] | T | A | 6.636e-5 | 0.929 |
INTRON
Mrtf |
TF binding site
BDTNP1_TFBS_twi
|
|
2R | 10571811 | 2R_10571811_SNP [dm3] 2R_14684306_SNP [dm6] | G | T | 6.638e-5 | 0.929 |
SYNONYMOUS_CODING
mspo |
||
3L | 14578925 | 3L_14578925_SNP [dm3] 3L_14585825_SNP [dm6] | G | A | 6.644e-5 | 0.929 |
INTRON
HGTX |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
|
|
3R | 9914252 | 3R_9914252_SNP [dm3] 3R_14088530_SNP [dm6] | G | A | 6.798e-5 | 0.929 |
UPSTREAM
Npc2b DOWNSTREAM foxo INTERGENIC |
TF binding site
mE1_TFBS_bab1
|
|
X | 19178930 | X_19178930_SNP [dm3] X_19284897_SNP [dm6] | C | A | 6.921e-5 | 0.929 |
UPSTREAM
CG8034 INTRON CG8034 |
||
3L | 2698458 | 3L_2698458_SNP [dm3] 3L_2698458_SNP [dm6] | G | A | 6.958e-5 | 0.929 |
INTRON
Fife |
||
3R | 2136550 | 3R_2136550_SNP [dm3] 3R_6310828_SNP [dm6] | G | A | 7.023e-5 | 0.929 |
NON_SYNONYMOUS_CODING
CG31560 UPSTREAM Osi17 |
TF binding site
mE1_TFBS_HSA
|
|
3L | 15660545 | 3L_15660545_SNP [dm3] 3L_15667445_SNP [dm6] | A | C | 7.108e-5 | 0.929 |
INTERGENIC
|
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2L | 12088471 | 2L_12088471_SNP [dm3] 2L_12088471_SNP [dm6] | C | T | 7.392e-7 | 0.699 |
DOWNSTREAM
CR44593 INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad |
|
X | 3320777 | X_3320777_SNP [dm3] X_3426744_SNP [dm6] | C | G | 1.184e-6 | 0.699 |
DOWNSTREAM
tRNA:CR32493 INTRON CR44999 & 1 other |
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 4589702 | 2L_4589702_SNP [dm3] 2L_4589702_SNP [dm6] | G | A | 1.373e-6 | 0.699 |
INTRON
dp |
||
2L | 14454945 | 2L_14454945_DEL [dm3] 2L_14454945_DEL [dm6] | AA | A | 1.565e-6 | 0.699 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
|
|
2L | 11774646 | 2L_11774646_SNP [dm3] 2L_11774646_SNP [dm6] | G | A | 1.945e-6 | 0.699 |
INTERGENIC
|
||
3L | 2362793 | 3L_2362793_SNP [dm3] 3L_2362793_SNP [dm6] | C | A | 2.638e-6 | 0.699 |
DOWNSTREAM
CG13801 INTERGENIC |
||
2L | 14454941 | 2L_14454941_SNP [dm3] 2L_14454941_SNP [dm6] | G | T | 3.041e-6 | 0.699 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
|
|
3L | 2362796 | 3L_2362796_SNP [dm3] 3L_2362796_SNP [dm6] | T | A | 3.537e-6 | 0.699 |
DOWNSTREAM
CG13801 INTERGENIC |
||
X | 14797734 | X_14797734_SNP [dm3] X_14903701_SNP [dm6] | G | A | 3.656e-6 | 0.699 |
INTRON
Flo2 & 1 other |
||
2L | 14454955 | 2L_14454955_SNP [dm3] 2L_14454955_SNP [dm6] | A | T | 3.729e-6 | 0.699 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
|
|
2L | 9842951 | 2L_9842951_SNP [dm3] 2L_9842951_SNP [dm6] | C | T | 7.774e-6 | 1 |
INTRON
nAChRalpha6 |
||
X | 9463582 | X_9463582_SNP [dm3] X_9569549_SNP [dm6] | G | C | 7.876e-6 | 1 |
SYNONYMOUS_CODING
Cubn |
TF binding site
mE1_TFBS_chinmo
|
|
3R | 14146261 | 3R_14146261_SNP [dm3] 3R_18320539_SNP [dm6] | C | T | 8.035e-6 | 1 |
INTRON
CG31235 |
||
X | 10814748 | X_10814748_SNP [dm3] X_10920715_SNP [dm6] | T | C | 8.824e-6 | 1 |
UTR_3_PRIME
CG43901 |
TF binding site
BDTNP1_TFBS_dl
|
|
3R | 10034648 | 3R_10034648_SNP [dm3] 3R_14208926_SNP [dm6] | C | T | 8.990e-6 | 1 |
INTRON
Dop1R1 |
||
3R | 2174486 | 3R_2174486_SNP [dm3] 3R_6348764_SNP [dm6] | C | T | 9.412e-6 | 1 |
UPSTREAM
Hr83 INTERGENIC |
||
2L | 14606006 | 2L_14606006_SNP [dm3] 2L_14606006_SNP [dm6] | C | A | 1.150e-5 | 1 |
INTRON
osp |
||
3L | 2529215 | 3L_2529215_SNP [dm3] 3L_2529215_SNP [dm6] | G | A | 1.269e-5 | 1 |
INTRON
Spn |
TF binding site
mE1_TFBS_HSA
|
|
3L | 19171274 | 3L_19171274_INS [dm3] 3L_19178174_INS [dm6] | C | CC | 1.271e-5 | 1 |
INTRON
fz2 |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1 |
|
3R | 11634069 | 3R_11634069_SNP [dm3] 3R_15808347_SNP [dm6] | A | G | 1.338e-5 | 1 |
INTRON
alpha-Man-IIb |
||
2L | 14605729 | 2L_14605729_SNP [dm3] 2L_14605729_SNP [dm6] | A | G | 1.505e-5 | 1 |
INTRON
osp |
||
3R | 19011785 | 3R_19011785_SNP [dm3] 3R_23186063_SNP [dm6] | T | A | 1.506e-5 | 1 |
UTR_3_PRIME
cnc DOWNSTREAM cnc & 1 other |
||
3L | 12429281 | 3L_12429281_SNP [dm3] 3L_12436181_SNP [dm6] | A | T | 1.602e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
3R | 17949245 | 3R_17949245_INS [dm3] 3R_22123523_INS [dm6] | T | TTCT | 1.644e-5 | 1 |
INTRON
CG42390 |
||
3L | 2529145 | 3L_2529145_SNP [dm3] 3L_2529145_SNP [dm6] | C | T | 1.790e-5 | 1 |
INTRON
Spn |
||
2L | 1445097 | 2L_1445097_SNP [dm3] 2L_1445097_SNP [dm6] | T | C | 1.809e-5 | 1 |
INTERGENIC
|
TF binding site
mE1_TFBS_chinmo
|
|
3R | 6034988 | 3R_6034988_SNP [dm3] 3R_10209266_SNP [dm6] | G | A | 1.899e-5 | 1 |
INTRON
Syn & 1 other |
||
3L | 12429280 | 3L_12429280_SNP [dm3] 3L_12436180_SNP [dm6] | A | C | 1.908e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
2L | 14595117 | 2L_14595117_SNP [dm3] 2L_14595117_SNP [dm6] | T | C | 1.908e-5 | 1 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 24573844 | 3R_24573844_SNP [dm3] 3R_28748122_SNP [dm6] | A | G | 1.951e-5 | 1 |
DOWNSTREAM
CG10000 INTERGENIC |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3L | 12441004 | 3L_12441004_SNP [dm3] 3L_12447904_SNP [dm6] | A | G | 2.188e-5 | 1 |
INTERGENIC
|
||
2R | 17140024 | 2R_17140024_SNP [dm3] 2R_21252519_SNP [dm6] | G | T | 2.226e-5 | 1 |
INTERGENIC
|
TF binding site
mE1_TFBS_bab1
|
|
3R | 14473529 | 3R_14473529_SNP [dm3] 3R_18647807_SNP [dm6] | T | A | 2.262e-5 | 1 |
NON_SYNONYMOUS_CODING
qin |
TF binding site
mE1_TFBS_sens
|
|
3L | 12640038 | 3L_12640038_SNP [dm3] 3L_12646938_SNP [dm6] | C | G | 2.354e-5 | 1 |
EXON
CR32111 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad
|
|
2R | 19527465 | 2R_19527465_SNP [dm3] 2R_23639942_SNP [dm6] | G | A | 2.368e-5 | 1 |
UPSTREAM
CR45153 INTRON retn |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA |
|
3R | 6034796 | 3R_6034796_SNP [dm3] 3R_10209074_SNP [dm6] | C | T | 2.426e-5 | 1 |
INTRON
Syn & 1 other |
||
2L | 1432126 | 2L_1432126_SNP [dm3] 2L_1432126_SNP [dm6] | T | A | 2.557e-5 | 1 |
UPSTREAM
snRNA:U3:22A INTERGENIC |
TF binding site
mE1_TFBS_cad
|
|
3R | 23794728 | 3R_23794728_SNP [dm3] 3R_27969006_SNP [dm6] | T | C | 2.608e-5 | 1 |
SYNONYMOUS_CODING
betaTub97EF |
TF binding site
mE1_TFBS_cad
|
|
2L | 6844325 | 2L_6844325_SNP [dm3] 2L_6844325_SNP [dm6] | A | G | 2.643e-5 | 1 |
INTERGENIC
|
||
3R | 10731268 | 3R_10731268_SNP [dm3] 3R_14905546_SNP [dm6] | C | G | 2.676e-5 | 1 |
INTERGENIC
|
||
3R | 18782269 | 3R_18782269_SNP [dm3] 3R_22956547_SNP [dm6] | T | C | 2.950e-5 | 1 |
INTRON
klg |
||
3L | 15723370 | 3L_15723370_SNP [dm3] 3L_15730270_SNP [dm6] | G | A | 2.994e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
|
|
3R | 17723076 | 3R_17723076_SNP [dm3] 3R_21897354_SNP [dm6] | A | G | 3.004e-5 | 1 |
INTRON
CG6678 |
||
3R | 17949272 | 3R_17949272_SNP [dm3] 3R_22123550_SNP [dm6] | A | T | 3.086e-5 | 1 |
INTRON
CG42390 |
||
3L | 10387054 | 3L_10387054_SNP [dm3] 3L_10393954_SNP [dm6] | T | C | 3.086e-5 | 1 |
INTERGENIC
|
||
X | 16188354 | X_16188354_SNP [dm3] X_16294321_SNP [dm6] | A | G | 3.122e-5 | 1 |
SPLICE_SITE_REGION
CG9911 DOWNSTREAM caz INTRON CG9911 |
||
2L | 1444778 | 2L_1444778_SNP [dm3] 2L_1444778_SNP [dm6] | G | T | 3.195e-5 | 1 |
DOWNSTREAM
CG43402 INTERGENIC |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2L | 7766763 | 2L_7766763_SNP [dm3] 2L_7766763_SNP [dm6] | G | A | 3.248e-5 | 1 |
UPSTREAM
CG7191 DOWNSTREAM CG7196 INTERGENIC |
||
3L | 16545311 | 3L_16545311_SNP [dm3] 3L_16552211_SNP [dm6] | T | C | 3.368e-5 | 1 |
INTERGENIC
|
||
3L | 12429123 | 3L_12429123_SNP [dm3] 3L_12436023_SNP [dm6] | A | G | 3.383e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
3L | 15713923 | 3L_15713923_SNP [dm3] 3L_15720823_SNP [dm6] | T | C | 3.439e-5 | 1 |
DOWNSTREAM
CG42570 & 1 other INTERGENIC |
TF binding site
mE1_TFBS_cad
|
|
3L | 8440660 | 3L_8440660_SNP [dm3] 3L_8447560_SNP [dm6] | G | A | 3.461e-5 | 1 |
INTRON
CG6983 |
||
2L | 12088430 | 2L_12088430_SNP [dm3] 2L_12088430_SNP [dm6] | C | T | 3.520e-5 | 1 |
DOWNSTREAM
CR44593 INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad |
|
3L | 8833986 | 3L_8833986_SNP [dm3] 3L_8840886_SNP [dm6] | G | T | 3.530e-5 | 1 |
INTRON
dally |
TF binding site
mE1_TFBS_HSA
|
|
3R | 17949259 | 3R_17949259_SNP [dm3] 3R_22123537_SNP [dm6] | A | T | 3.713e-5 | 1 |
INTRON
CG42390 |
||
X | 2347866 | X_2347866_SNP [dm3] X_2453833_SNP [dm6] | T | G | 3.764e-5 | 1 |
INTRON
boi |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2L | 14595511 | 2L_14595511_SNP [dm3] 2L_14595511_SNP [dm6] | A | G | 3.906e-5 | 1 |
INTERGENIC
|
||
2L | 16872003 | 2L_16872003_SNP [dm3] 2L_16872003_SNP [dm6] | C | G | 3.912e-5 | 1 |
INTRON
CR31781 |
||
2L | 10205365 | 2L_10205365_SNP [dm3] 2L_10205365_SNP [dm6] | A | T | 3.935e-5 | 1 |
UTR_3_PRIME
CG5734 |
TF binding site
mE1_TFBS_cad
|
|
3L | 5141468 | 3L_5141468_SNP [dm3] 3L_5148368_SNP [dm6] | C | T | 4.107e-5 | 1 |
SYNONYMOUS_CODING
Aats-ala-m |
TF binding site
mE1_TFBS_chinmo
|
|
3L | 13970341 | 3L_13970341_SNP [dm3] 3L_13977241_SNP [dm6] | C | T | 4.145e-5 | 1 |
SYNONYMOUS_CODING
Hsc70-1 DOWNSTREAM CG17364 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_sens
|
|
2L | 10033565 | 2L_10033565_SNP [dm3] 2L_10033565_SNP [dm6] | G | A | 4.362e-5 | 1 |
INTRON
obst-B |
||
3L | 3684231 | 3L_3684231_SNP [dm3] 3L_3684231_SNP [dm6] | C | A | 4.371e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 12766285 | 2R_12766285_SNP [dm3] 2R_16878780_SNP [dm6] | T | A | 4.403e-5 | 1 |
INTRON
CG8910 |
||
3R | 17949288 | 3R_17949288_SNP [dm3] 3R_22123566_SNP [dm6] | C | T | 4.428e-5 | 1 |
INTRON
CG42390 |
||
2R | 14048104 | 2R_14048104_SNP [dm3] 2R_18160599_SNP [dm6] | G | A | 4.503e-5 | 1 |
UPSTREAM
CG10915 DOWNSTREAM CG10914 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_Ubx
|
|
X | 8034308 | X_8034308_SNP [dm3] X_8140275_SNP [dm6] | T | C | 4.586e-5 | 1 |
SYNONYMOUS_CODING
Smox |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_chinmo
|
|
2R | 12034055 | 2R_12034055_SNP [dm3] 2R_16146550_SNP [dm6] | G | A | 4.729e-5 | 1 |
SYNONYMOUS_CODING
Ext2 DOWNSTREAM Aats-cys |
||
3L | 19180157 | 3L_19180157_SNP [dm3] 3L_19187057_SNP [dm6] | A | T | 4.875e-5 | 1 |
INTRON
fz2 |
||
X | 3798177 | X_3798177_SNP [dm3] X_3904144_SNP [dm6] | G | C | 4.880e-5 | 1 |
NON_SYNONYMOUS_CODING
CG42541 |
||
X | 18388007 | X_18388007_SNP [dm3] X_18493974_SNP [dm6] | T | C | 4.932e-5 | 1 |
NON_SYNONYMOUS_CODING
CG15043 UPSTREAM CR45627 |
||
3L | 18677341 | 3L_18677341_SNP [dm3] 3L_18684241_SNP [dm6] | T | G | 5.027e-5 | 1 |
UPSTREAM
Chmp1 DOWNSTREAM Cyp12c1 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
3L | 2528080 | 3L_2528080_SNP [dm3] 3L_2528080_SNP [dm6] | G | A | 5.051e-5 | 1 |
INTRON
Spn |
||
3L | 2757914 | 3L_2757914_SNP [dm3] 3L_2757914_SNP [dm6] | T | A | 5.055e-5 | 1 |
INTRON
Mrtf |
TF binding site
BDTNP1_TFBS_twi
|
|
3L | 16722891 | 3L_16722891_SNP [dm3] 3L_16729791_SNP [dm6] | C | T | 5.103e-5 | 1 |
INTRON
Dbp73D |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 18177874 | 3R_18177874_SNP [dm3] 3R_22352152_SNP [dm6] | C | A | 5.160e-5 | 1 |
UPSTREAM
rdhB INTRON rdhB |
||
3R | 2136550 | 3R_2136550_SNP [dm3] 3R_6310828_SNP [dm6] | G | A | 5.223e-5 | 1 |
NON_SYNONYMOUS_CODING
CG31560 UPSTREAM Osi17 |
TF binding site
mE1_TFBS_HSA
|
|
X | 15416998 | X_15416998_SNP [dm3] X_15522965_SNP [dm6] | A | T | 5.333e-5 | 1 |
UPSTREAM
Ac13E INTRON Ac13E |
||
2R | 12607418 | 2R_12607418_SNP [dm3] 2R_16719913_SNP [dm6] | A | T | 5.529e-5 | 1 |
INTRON
CG30463 |
||
3L | 2529228 | 3L_2529228_SNP [dm3] 3L_2529228_SNP [dm6] | A | G | 5.616e-5 | 1 |
INTRON
Spn |
TF binding site
mE1_TFBS_HSA
|
|
X | 14169111 | X_14169111_SNP [dm3] X_14275078_SNP [dm6] | T | A | 5.646e-5 | 1 |
INTRON
na |
||
3R | 10731267 | 3R_10731267_SNP [dm3] 3R_14905545_SNP [dm6] | C | T | 5.651e-5 | 1 |
INTERGENIC
|
||
3R | 11297056 | 3R_11297056_SNP [dm3] 3R_15471334_SNP [dm6] | C | T | 5.710e-5 | 1 |
INTRON
AdamTS-A |
||
2L | 9030268 | 2L_9030268_SNP [dm3] 2L_9030268_SNP [dm6] | T | A | 5.715e-5 | 1 |
INTRON
CG9582 & 1 other |
||
3R | 20334502 | 3R_20334502_SNP [dm3] 3R_24508780_SNP [dm6] | A | C | 5.722e-5 | 1 |
DOWNSTREAM
nAChRbeta2 INTERGENIC |
||
3R | 4048038 | 3R_4048038_SNP [dm3] 3R_8222316_SNP [dm6] | A | G | 5.805e-5 | 1 |
DOWNSTREAM
CG18249 INTERGENIC |
||
2R | 837772 | 2R_837772_SNP [dm3] 2R_4950267_SNP [dm6] | T | G | 5.912e-5 | 1 |
INTRON
Ir41a |
||
3R | 13809375 | 3R_13809375_SNP [dm3] 3R_17983653_SNP [dm6] | G | T | 5.989e-5 | 1 |
INTRON
cpo |
||
2R | 951364 | 2R_951364_SNP [dm3] 2R_5063859_SNP [dm6] | A | G | 6.079e-5 | 1 |
INTERGENIC
|
||
3R | 504594 | 3R_504594_SNP [dm3] 3R_4678872_SNP [dm6] | C | T | 6.094e-5 | 1 |
INTRON
CG43427 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
3L | 22901386 | 3L_22901386_SNP [dm3] 3L_22908286_SNP [dm6] | A | C | 6.170e-5 | 1 |
INTERGENIC
|
||
2L | 14354182 | 2L_14354182_SNP [dm3] 2L_14354182_SNP [dm6] | C | T | 6.472e-5 | 1 |
SYNONYMOUS_CODING
l_2_34Fd UPSTREAM Rab14 |
TF binding site
mE1_TFBS_cad mE1_TFBS_sens
|
|
X | 8810411 | X_8810411_SNP [dm3] X_8916378_SNP [dm6] | T | A | 6.745e-5 | 1 |
INTRON
rdgA |
||
X | 7746109 | X_7746109_SNP [dm3] X_7852076_SNP [dm6] | G | A | 6.844e-5 | 1 |
DOWNSTREAM
CG10920 INTERGENIC |
||
2L | 15284156 | 2L_15284156_SNP [dm3] 2L_15284156_SNP [dm6] | A | G | 6.846e-5 | 1 |
UPSTREAM
CG15263 INTERGENIC |
||
3R | 6034999 | 3R_6034999_SNP [dm3] 3R_10209277_SNP [dm6] | T | C | 6.847e-5 | 1 |
INTRON
Syn & 1 other |
||
2R | 11286523 | 2R_11286523_SNP [dm3] 2R_15399018_SNP [dm6] | A | C | 6.868e-5 | 1 |
INTERGENIC
|
||
X | 3320827 | X_3320827_SNP [dm3] X_3426794_SNP [dm6] | A | T | 6.988e-5 | 1 |
DOWNSTREAM
tRNA:CR32493 INTRON CR44999 & 1 other |
TF binding site
BDTNP1_TFBS_dl
|
|
3L | 14680184 | 3L_14680184_SNP [dm3] 3L_14687084_SNP [dm6] | A | T | 6.999e-5 | 1 |
INTRON
ome |
||
2L | 17042976 | 2L_17042976_SNP [dm3] 2L_17042976_SNP [dm6] | C | G | 7.019e-5 | 1 |
INTRON
CR43802 EXON CR43802 |