©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2L | 3574775 | 2L_3574775_SNP [dm3] 2L_3574775_SNP [dm6] | T | C | 1.784e-6 | 0.731 |
UPSTREAM
CR43822 INTERGENIC |
TF binding site
mE1_TFBS_cad
|
|
2R | 2462112 | 2R_2462112_SNP [dm3] 2R_6574607_SNP [dm6] | G | A | 1.853e-6 | 0.731 |
INTRON
jing |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_Trl
|
|
3L | 4183482 | 3L_4183482_SNP [dm3] 3L_4183482_SNP [dm6] | A | G | 1.984e-6 | 0.731 |
SYNONYMOUS_CODING
Teh3 INTRON CG18675 & 1 other |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2R | 2464467 | 2R_2464467_SNP [dm3] 2R_6576962_SNP [dm6] | C | G | 2.416e-6 | 0.731 |
INTRON
jing |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2R | 2479376 | 2R_2479376_SNP [dm3] 2R_6591871_SNP [dm6] | G | T | 2.514e-6 | 0.731 |
INTRON
jing |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2R | 2452760 | 2R_2452760_DEL [dm3] 2R_6565255_DEL [dm6] | TAG | T | 2.630e-6 | 0.731 |
INTRON
jing |
||
2R | 2475086 | 2R_2475086_SNP [dm3] 2R_6587581_SNP [dm6] | C | A | 3.034e-6 | 0.731 |
INTRON
jing |
||
2R | 2477950 | 2R_2477950_SNP [dm3] 2R_6590445_SNP [dm6] | C | A | 3.119e-6 | 0.731 |
INTRON
jing |
TF binding site
mE1_TFBS_HSA
|
|
3L | 4477110 | 3L_4477110_SNP [dm3] 3L_4477110_SNP [dm6] | C | A | 3.815e-6 | 0.795 |
INTERGENIC
|
||
2R | 2456244 | 2R_2456244_SNP [dm3] 2R_6568739_SNP [dm6] | G | A | 4.987e-6 | 0.864 |
INTRON
jing |
TF binding site
BDTNP1_TFBS_twi
|
|
2R | 11036971 | 2R_11036971_SNP [dm3] 2R_15149466_SNP [dm6] | C | T | 5.106e-6 | 0.864 |
UTR_3_PRIME
CG7544 |
||
2R | 1770880 | 2R_1770880_SNP [dm3] 2R_5883375_SNP [dm6] | C | T | 5.527e-6 | 0.864 |
INTERGENIC
|
||
2R | 2448627 | 2R_2448627_DEL [dm3] 2R_6561122_DEL [dm6] | CAGTT | C | 6.325e-6 | 0.904 |
INTRON
jing |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2R | 2464017 | 2R_2464017_SNP [dm3] 2R_6576512_SNP [dm6] | T | G | 6.961e-6 | 0.904 |
INTRON
jing |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
X | 2574462 | X_2574462_SNP [dm3] X_2680429_SNP [dm6] | T | A | 7.226e-6 | 0.904 |
UTR_3_PRIME
HLH3B DOWNSTREAM sgg |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 19493762 | 2R_19493762_SNP [dm3] 2R_23606239_SNP [dm6] | A | T | 7.957e-6 | 0.933 |
SYNONYMOUS_CODING
CG17662 INTRON CG17664 |
TF binding site
mE1_TFBS_chinmo
|
|
3R | 13409145 | 3R_13409145_SNP [dm3] 3R_17583423_SNP [dm6] | T | C | 8.805e-6 | 0.972 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
2R | 2456162 | 2R_2456162_SNP [dm3] 2R_6568657_SNP [dm6] | G | A | 9.600e-6 | 0.98 |
INTRON
jing |
||
2R | 15962887 | 2R_15962887_SNP [dm3] 2R_20075382_SNP [dm6] | C | A | 1.073e-5 | 0.98 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi
|
|
2R | 11037016 | 2R_11037016_SNP [dm3] 2R_15149511_SNP [dm6] | C | T | 1.090e-5 | 0.98 |
UTR_3_PRIME
CG7544 |
||
3L | 14247280 | 3L_14247280_SNP [dm3] 3L_14254180_SNP [dm6] | C | G | 1.097e-5 | 0.98 |
INTERGENIC
|
||
2R | 18867025 | 2R_18867025_SNP [dm3] 2R_22979502_SNP [dm6] | G | A | 1.157e-5 | 0.985 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi
|
|
X | 19125779 | X_19125779_SNP [dm3] X_19231746_SNP [dm6] | G | A | 1.208e-5 | 0.985 |
INTRON
CG7884 |
||
2L | 15566961 | 2L_15566961_SNP [dm3] 2L_15566961_SNP [dm6] | C | G | 1.324e-5 | 1 |
INTRON
kek3 |
||
3L | 21293167 | 3L_21293167_SNP [dm3] 3L_21300067_SNP [dm6] | T | A | 1.338e-5 | 1 |
UPSTREAM
Cpr78Cc INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
X | 17306162 | X_17306162_SNP [dm3] X_17412129_SNP [dm6] | G | A | 1.514e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
|
|
3L | 13916895 | 3L_13916895_SNP [dm3] 3L_13923795_SNP [dm6] | T | A | 1.532e-5 | 1 |
INTRON
Rgl |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
|
|
2R | 2042573 | 2R_2042573_SNP [dm3] 2R_6155068_SNP [dm6] | A | C | 1.568e-5 | 1 |
INTRON
EcR |
||
2R | 14662987 | 2R_14662987_SNP [dm3] 2R_18775482_SNP [dm6] | G | C | 1.891e-5 | 1 |
DOWNSTREAM
Mctp & 1 other INTRON CR43964 |
TF binding site
mE1_TFBS_bab1
|
|
2R | 8174686 | 2R_8174686_SNP [dm3] 2R_12287181_SNP [dm6] | G | A | 1.954e-5 | 1 |
INTRON
CG42700 |
||
2R | 2475994 | 2R_2475994_SNP [dm3] 2R_6588489_SNP [dm6] | G | A | 2.016e-5 | 1 |
INTRON
jing |
||
3R | 23814659 | 3R_23814659_DEL [dm3] 3R_27988937_DEL [dm6] | TAC | T | 2.030e-5 | 1 |
UPSTREAM
betaTub97EF DOWNSTREAM CG4815 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
2R | 14662170 | 2R_14662170_SNP [dm3] 2R_18774665_SNP [dm6] | T | C | 2.098e-5 | 1 |
UTR_3_PRIME
Mctp UPSTREAM CR43964 |
||
2R | 9979836 | 2R_9979836_SNP [dm3] 2R_14092331_SNP [dm6] | T | C | 2.144e-5 | 1 |
UTR_5_PRIME
Prosap DOWNSTREAM CG42288 |
||
3R | 10419106 | 3R_10419106_SNP [dm3] 3R_14593384_SNP [dm6] | G | A | 2.157e-5 | 1 |
INTRON
stumps |
TF binding site
mE1_TFBS_cad
|
|
3R | 11702511 | 3R_11702511_SNP [dm3] 3R_15876789_SNP [dm6] | G | A | 2.198e-5 | 1 |
UPSTREAM
CG31183 INTERGENIC |
||
3L | 4183512 | 3L_4183512_SNP [dm3] 3L_4183512_SNP [dm6] | T | C | 2.206e-5 | 1 |
SYNONYMOUS_CODING
Teh3 INTRON CG18675 & 1 other |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2L | 14775640 | 2L_14775640_SNP [dm3] 2L_14775640_SNP [dm6] | A | C | 2.387e-5 | 1 |
UPSTREAM
CG4650 INTERGENIC |
TF binding site
mE1_TFBS_HSA mE1_TFBS_Kr
|
|
2R | 1770272 | 2R_1770272_SNP [dm3] 2R_5882767_SNP [dm6] | C | T | 2.420e-5 | 1 |
INTERGENIC
|
||
2R | 11478154 | 2R_11478154_DEL [dm3] 2R_15590649_DEL [dm6] | GGAA | G | 2.439e-5 | 1 |
INTERGENIC
|
||
2L | 10645358 | 2L_10645358_SNP [dm3] 2L_10645358_SNP [dm6] | G | A | 2.507e-5 | 1 |
INTRON
CG18284 |
||
2R | 17808438 | 2R_17808438_SNP [dm3] 2R_21920933_SNP [dm6] | G | A | 2.529e-5 | 1 |
INTRON
Fili |
TF binding site
mE1_TFBS_inv
|
|
3R | 10987229 | 3R_10987229_SNP [dm3] 3R_15161507_SNP [dm6] | C | T | 2.547e-5 | 1 |
INTRON
Gyc88E |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_inv
|
|
3L | 2598907 | 3L_2598907_SNP [dm3] 3L_2598907_SNP [dm6] | A | G | 2.562e-5 | 1 |
SYNONYMOUS_CODING
CG12182 UPSTREAM CG16985 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_sens
|
|
3R | 10993104 | 3R_10993104_SNP [dm3] 3R_15167382_SNP [dm6] | A | C | 2.616e-5 | 1 |
INTRON
Gyc88E |
||
2L | 7241988 | 2L_7241988_SNP [dm3] 2L_7241988_SNP [dm6] | T | A | 2.700e-5 | 1 |
INTRON
Ndae1 |
||
X | 9661767 | X_9661767_SNP [dm3] X_9767734_SNP [dm6] | G | A | 2.750e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2L | 15519548 | 2L_15519548_SNP [dm3] 2L_15519548_SNP [dm6] | G | T | 2.810e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_inv
|
|
2R | 16409335 | 2R_16409335_SNP [dm3] 2R_20521830_SNP [dm6] | G | A | 2.840e-5 | 1 |
INTERGENIC
|
||
3R | 10993084 | 3R_10993084_DEL [dm3] 3R_15167362_DEL [dm6] | TTCATTAAAACTTAATAA... | T | 2.859e-5 | 1 |
INTRON
Gyc88E |
||
3R | 10993078 | 3R_10993078_INS [dm3] 3R_15167356_INS [dm6] | T | TGCATTC | 2.898e-5 | 1 |
INTRON
Gyc88E |
||
X | 14381548 | X_14381548_SNP [dm3] X_14487515_SNP [dm6] | G | A | 3.001e-5 | 1 |
INTERGENIC
|
||
2R | 10473003 | 2R_10473003_SNP [dm3] 2R_14585498_SNP [dm6] | A | T | 3.134e-5 | 1 |
UTR_3_PRIME
ttv DOWNSTREAM ttv |
||
2R | 11037110 | 2R_11037110_SNP [dm3] 2R_15149605_SNP [dm6] | C | T | 3.163e-5 | 1 |
UTR_3_PRIME
CG7544 |
||
2R | 17808517 | 2R_17808517_SNP [dm3] 2R_21921012_SNP [dm6] | C | T | 3.180e-5 | 1 |
INTRON
Fili |
TF binding site
mE1_TFBS_inv
|
|
2R | 2458135 | 2R_2458135_SNP [dm3] 2R_6570630_SNP [dm6] | T | C | 3.246e-5 | 1 |
INTRON
jing |
transposable element
FlyBase
|
|
2R | 19493837 | 2R_19493837_SNP [dm3] 2R_23606314_SNP [dm6] | A | G | 3.281e-5 | 1 |
SYNONYMOUS_CODING
CG17662 INTRON CG17664 |
TF binding site
mE1_TFBS_chinmo
|
|
3R | 19186213 | 3R_19186213_SNP [dm3] 3R_23360491_SNP [dm6] | A | C | 3.335e-5 | 1 |
DOWNSTREAM
RpS3 INTERGENIC |
||
2L | 12747923 | 2L_12747923_SNP [dm3] 2L_12747923_SNP [dm6] | C | A | 3.466e-5 | 1 |
INTERGENIC
|
||
3L | 21322025 | 3L_21322025_SNP [dm3] 3L_21328925_SNP [dm6] | T | A | 3.523e-5 | 1 |
INTRON
Rab26 |
||
2L | 15519540 | 2L_15519540_SNP [dm3] 2L_15519540_SNP [dm6] | A | T | 3.594e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_inv
|
|
3L | 3518882 | 3L_3518882_SNP [dm3] 3L_3518882_SNP [dm6] | C | T | 3.639e-5 | 1 |
INTRON
Eip63E |
||
2R | 4197946 | 2R_4197946_SNP [dm3] 2R_8310441_SNP [dm6] | T | A | 3.728e-5 | 1 |
DOWNSTREAM
CR44449 & 1 other INTERGENIC |
||
3L | 21294804 | 3L_21294804_SNP [dm3] 3L_21301704_SNP [dm6] | T | G | 3.756e-5 | 1 |
DOWNSTREAM
CG11309 & 1 other EXON CR45432 |
||
2R | 2475256 | 2R_2475256_SNP [dm3] 2R_6587751_SNP [dm6] | C | A | 3.767e-5 | 1 |
INTRON
jing |
||
X | 14381552 | X_14381552_SNP [dm3] X_14487519_SNP [dm6] | C | T | 3.779e-5 | 1 |
INTERGENIC
|
||
X | 14381553 | X_14381553_SNP [dm3] X_14487520_SNP [dm6] | T | C | 3.779e-5 | 1 |
INTERGENIC
|
||
3L | 12563213 | 3L_12563213_SNP [dm3] 3L_12570113_SNP [dm6] | C | T | 3.865e-5 | 1 |
INTRON
sowah |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_cad
|
|
3L | 8076340 | 3L_8076340_SNP [dm3] 3L_8083240_SNP [dm6] | T | C | 3.900e-5 | 1 |
UPSTREAM
CR43974 INTRON Ect4 |
TF binding site
mE1_TFBS_cad
|
|
X | 16356723 | X_16356723_SNP [dm3] X_16462690_SNP [dm6] | T | A | 3.900e-5 | 1 |
UTR_3_PRIME
para DOWNSTREAM para |
TF binding site
mE1_TFBS_HSA
|
|
3R | 13409127 | 3R_13409127_SNP [dm3] 3R_17583405_SNP [dm6] | G | A | 4.031e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
3L | 4183449 | 3L_4183449_SNP [dm3] 3L_4183449_SNP [dm6] | G | A | 4.480e-5 | 1 |
SYNONYMOUS_CODING
Teh3 INTRON CG18675 & 1 other |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2L | 4576413 | 2L_4576413_SNP [dm3] 2L_4576413_SNP [dm6] | T | A | 4.550e-5 | 1 |
INTRON
dp |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2R | 10472994 | 2R_10472994_DEL [dm3] 2R_14585489_DEL [dm6] | ACA | A | 4.560e-5 | 1 |
UTR_3_PRIME
ttv DOWNSTREAM ttv |
||
3L | 3580697 | 3L_3580697_SNP [dm3] 3L_3580697_SNP [dm6] | C | T | 4.574e-5 | 1 |
INTRON
Eip63E |
||
3L | 21280700 | 3L_21280700_SNP [dm3] 3L_21287600_SNP [dm6] | G | T | 4.673e-5 | 1 |
SYNONYMOUS_CODING
pzg |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 1697567 | 3L_1697567_SNP [dm3] 3L_1697567_SNP [dm6] | T | G | 4.681e-5 | 1 |
INTRON
CG7991 |
||
3L | 12183025 | 3L_12183025_SNP [dm3] 3L_12189925_SNP [dm6] | T | C | 4.717e-5 | 1 |
NON_SYNONYMOUS_CODING
Est-6 UPSTREAM Est-P |
TF binding site
mE1_TFBS_sens
|
|
2L | 17696923 | 2L_17696923_SNP [dm3] 2L_17696923_SNP [dm6] | A | G | 4.789e-5 | 1 |
INTRON
CadN |
||
3R | 23814644 | 3R_23814644_DEL [dm3] 3R_27988922_DEL [dm6] | TCGAAAACCTA... | T | 5.089e-5 | 1 |
UPSTREAM
betaTub97EF DOWNSTREAM CG4815 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3R | 10988000 | 3R_10988000_SNP [dm3] 3R_15162278_SNP [dm6] | T | C | 5.101e-5 | 1 |
INTRON
Gyc88E |
||
2R | 2464170 | 2R_2464170_INS [dm3] 2R_6576665_INS [dm6] | T | TA | 5.173e-5 | 1 |
INTRON
jing |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2R | 16850678 | 2R_16850678_SNP [dm3] 2R_20963173_SNP [dm6] | C | A | 5.193e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
|
|
X | 2784057 | X_2784057_SNP [dm3] X_2890024_SNP [dm6] | G | T | 5.240e-5 | 1 |
UPSTREAM
CG3526 INTRON kirre |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
2L | 3371655 | 2L_3371655_SNP [dm3] 2L_3371655_SNP [dm6] | T | G | 5.328e-5 | 1 |
UPSTREAM
CG34394 INTRON CG34394 |
||
X | 12396290 | X_12396290_SNP [dm3] X_12502257_SNP [dm6] | G | C | 5.361e-5 | 1 |
INTRON
CG2556 |
||
3L | 10780422 | 3L_10780422_SNP [dm3] 3L_10787322_SNP [dm6] | A | G | 5.408e-5 | 1 |
INTERGENIC
|
||
3L | 10347596 | 3L_10347596_SNP [dm3] 3L_10354496_SNP [dm6] | G | T | 5.432e-5 | 1 |
INTRON
CR44327 |
TF binding site
BDTNP1_TFBS_twi
|
|
2R | 2475713 | 2R_2475713_SNP [dm3] 2R_6588208_SNP [dm6] | G | A | 5.472e-5 | 1 |
INTRON
jing |
||
3L | 15749879 | 3L_15749879_SNP [dm3] 3L_15756779_SNP [dm6] | G | A | 5.556e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 3575104 | 2L_3575104_SNP [dm3] 2L_3575104_SNP [dm6] | A | G | 5.567e-5 | 1 |
UPSTREAM
CR43822 INTERGENIC |
||
2R | 11037031 | 2R_11037031_SNP [dm3] 2R_15149526_SNP [dm6] | T | C | 5.573e-5 | 1 |
UTR_3_PRIME
CG7544 |
||
3R | 23814656 | 3R_23814656_SNP [dm3] 3R_27988934_SNP [dm6] | G | C | 5.591e-5 | 1 |
UPSTREAM
betaTub97EF DOWNSTREAM CG4815 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
X | 12303850 | X_12303850_SNP [dm3] X_12409817_SNP [dm6] | C | G | 5.778e-5 | 1 |
UTR_3_PRIME
CG2574 |
||
3L | 4183533 | 3L_4183533_SNP [dm3] 3L_4183533_SNP [dm6] | G | A | 5.838e-5 | 1 |
SYNONYMOUS_CODING
Teh3 INTRON CG18675 & 1 other |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
3R | 26464663 | 3R_26464663_SNP [dm3] 3R_30638941_SNP [dm6] | T | C | 5.883e-5 | 1 |
INTERGENIC
|
||
3L | 3710760 | 3L_3710760_SNP [dm3] 3L_3710760_SNP [dm6] | T | C | 5.892e-5 | 1 |
INTERGENIC
|
||
X | 9661764 | X_9661764_SNP [dm3] X_9767731_SNP [dm6] | T | C | 5.956e-5 | 1 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3R | 9542636 | 3R_9542636_SNP [dm3] 3R_13716914_SNP [dm6] | C | T | 5.969e-5 | 1 |
DOWNSTREAM
CG9602 INTRON CG34383 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad
|
|
3L | 2225371 | 3L_2225371_SNP [dm3] 3L_2225371_SNP [dm6] | G | A | 6.000e-5 | 1 |
INTERGENIC
|
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2R | 19842544 | 2R_19842544_SNP [dm3] 2R_23955021_SNP [dm6] | C | G | 6.460e-8 | 0.121 |
NON_SYNONYMOUS_CODING
thoc5 UPSTREAM CG3803 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 8994503 | 2R_8994503_SNP [dm3] 2R_13106998_SNP [dm6] | T | A | 1.412e-7 | 0.132 |
INTERGENIC
|
||
2L | 1698874 | 2L_1698874_SNP [dm3] 2L_1698874_SNP [dm6] | T | A | 2.298e-7 | 0.144 |
UTR_3_PRIME
chinmo DOWNSTREAM chinmo |
||
2R | 19843340 | 2R_19843340_SNP [dm3] 2R_23955817_SNP [dm6] | T | A | 9.760e-7 | 0.402 |
NON_SYNONYMOUS_CODING
thoc5 DOWNSTREAM CG16787 |
TF binding site
mE1_TFBS_cad mE1_TFBS_sens
|
|
2R | 19841650 | 2R_19841650_SNP [dm3] 2R_23954127_SNP [dm6] | C | T | 1.432e-6 | 0.402 |
UTR_5_PRIME
thoc5 UPSTREAM CG3803 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad
|
|
2R | 8994475 | 2R_8994475_SNP [dm3] 2R_13106970_SNP [dm6] | A | C | 1.528e-6 | 0.402 |
INTERGENIC
|
||
2R | 8994500 | 2R_8994500_SNP [dm3] 2R_13106995_SNP [dm6] | T | C | 1.560e-6 | 0.402 |
INTERGENIC
|
||
2L | 14427007 | 2L_14427007_SNP [dm3] 2L_14427007_SNP [dm6] | T | A | 1.714e-6 | 0.402 |
INTERGENIC
|
||
3R | 4586891 | 3R_4586891_INS [dm3] 3R_8761169_INS [dm6] | C | CACC | 2.052e-6 | 0.428 |
INTRON
CG11768 & 1 other |
||
3R | 17685853 | 3R_17685853_INS [dm3] 3R_21860131_INS [dm6] | T | TT | 3.581e-6 | 0.5 |
DOWNSTREAM
CR45644 INTERGENIC |
TF binding site
mE1_TFBS_HSA mE1_TFBS_Kr
|
|
2R | 19842724 | 2R_19842724_SNP [dm3] 2R_23955201_SNP [dm6] | T | G | 4.251e-6 | 0.5 |
NON_SYNONYMOUS_CODING
thoc5 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 19841373 | 2R_19841373_SNP [dm3] 2R_23953850_SNP [dm6] | G | A | 4.261e-6 | 0.5 |
SYNONYMOUS_CODING
CG3803 UPSTREAM thoc5 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad
|
|
2R | 8772940 | 2R_8772940_SNP [dm3] 2R_12885435_SNP [dm6] | G | C | 4.441e-6 | 0.5 |
INTRON
vg |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl |
|
3R | 24190676 | 3R_24190676_SNP [dm3] 3R_28364954_SNP [dm6] | G | A | 4.530e-6 | 0.5 |
INTERGENIC
|
||
X | 3700322 | X_3700322_SNP [dm3] X_3806289_SNP [dm6] | A | T | 4.531e-6 | 0.5 |
INTRON
fd3F |
||
X | 3700364 | X_3700364_SNP [dm3] X_3806331_SNP [dm6] | G | C | 4.531e-6 | 0.5 |
INTRON
fd3F |
||
X | 3700368 | X_3700368_SNP [dm3] X_3806335_SNP [dm6] | C | A | 4.531e-6 | 0.5 |
INTRON
fd3F |
||
2R | 8994442 | 2R_8994442_SNP [dm3] 2R_13106937_SNP [dm6] | A | G | 5.688e-6 | 0.593 |
INTERGENIC
|
||
2L | 3327153 | 2L_3327153_SNP [dm3] 2L_3327153_SNP [dm6] | A | G | 6.982e-6 | 0.689 |
UPSTREAM
CG33282 DOWNSTREAM CG33281 INTERGENIC |
||
2L | 3327164 | 2L_3327164_SNP [dm3] 2L_3327164_SNP [dm6] | T | C | 7.538e-6 | 0.7 |
UPSTREAM
CG33282 DOWNSTREAM CG33281 INTERGENIC |
||
2L | 3325795 | 2L_3325795_SNP [dm3] 2L_3325795_SNP [dm6] | A | G | 7.833e-6 | 0.7 |
INTRON
CG33281 |
||
3L | 1944337 | 3L_1944337_SNP [dm3] 3L_1944337_SNP [dm6] | A | G | 9.305e-6 | 0.79 |
SYNONYMOUS_CODING
mu2 |
TF binding site
mE1_TFBS_cad
|
|
2L | 3248124 | 2L_3248124_SNP [dm3] 2L_3248124_SNP [dm6] | G | A | 9.909e-6 | 0.79 |
INTERGENIC
|
||
2L | 13392748 | 2L_13392748_SNP [dm3] 2L_13392748_SNP [dm6] | G | C | 1.010e-5 | 0.79 |
DOWNSTREAM
RpL24 INTRON CG7099 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
X | 6716926 | X_6716926_SNP [dm3] X_6822893_SNP [dm6] | G | T | 1.342e-5 | 0.998 |
UPSTREAM
Atx-1 DOWNSTREAM CG4542 INTERGENIC |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2R | 19842637 | 2R_19842637_SNP [dm3] 2R_23955114_SNP [dm6] | C | A | 1.389e-5 | 0.998 |
INTRON
thoc5 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 3248118 | 2L_3248118_DEL [dm3] 2L_3248118_DEL [dm6] | TAT | C | 1.499e-5 | 0.998 |
INTERGENIC
|
||
2R | 19842067 | 2R_19842067_SNP [dm3] 2R_23954544_SNP [dm6] | A | G | 1.585e-5 | 0.998 |
SYNONYMOUS_CODING
thoc5 UPSTREAM CG3803 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 13542556 | 2R_13542556_SNP [dm3] 2R_17655051_SNP [dm6] | T | C | 1.632e-5 | 0.998 |
INTRON
CCHa1-R |
||
2R | 8768679 | 2R_8768679_SNP [dm3] 2R_12881174_SNP [dm6] | A | C | 1.725e-5 | 0.998 |
SYNONYMOUS_CODING
Aats-asp UPSTREAM Nmda1 DOWNSTREAM CR45141 |
TF binding site
BDTNP1_TFBS_dl
|
|
3L | 1944336 | 3L_1944336_SNP [dm3] 3L_1944336_SNP [dm6] | C | T | 1.738e-5 | 0.998 |
NON_SYNONYMOUS_CODING
mu2 |
TF binding site
mE1_TFBS_cad
|
|
2R | 8994527 | 2R_8994527_SNP [dm3] 2R_13107022_SNP [dm6] | A | G | 1.740e-5 | 0.998 |
INTERGENIC
|
||
2L | 13237659 | 2L_13237659_SNP [dm3] 2L_13237659_SNP [dm6] | T | G | 1.755e-5 | 0.998 |
INTRON
CG5867 |
||
2R | 16327017 | 2R_16327017_SNP [dm3] 2R_20439512_SNP [dm6] | G | T | 1.809e-5 | 0.998 |
INTRON
CG12484 |
||
2R | 8772921 | 2R_8772921_SNP [dm3] 2R_12885416_SNP [dm6] | A | T | 1.863e-5 | 0.999 |
INTRON
vg |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl |
|
2R | 8771052 | 2R_8771052_SNP [dm3] 2R_12883547_SNP [dm6] | C | T | 1.955e-5 | 1 |
UPSTREAM
CR45141 DOWNSTREAM Aats-asp INTERGENIC |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi |
|
3L | 1946324 | 3L_1946324_SNP [dm3] 3L_1946324_SNP [dm6] | G | A | 2.232e-5 | 1 |
SYNONYMOUS_CODING
mu2 |
||
3R | 8797089 | 3R_8797089_DEL [dm3] 3R_12971367_DEL [dm6] | GCAACT | G | 2.245e-5 | 1 |
INTRON
CG7381 |
||
2L | 3327094 | 2L_3327094_SNP [dm3] 2L_3327094_SNP [dm6] | T | A | 2.250e-5 | 1 |
UPSTREAM
CG33282 DOWNSTREAM CG33281 INTERGENIC |
||
3L | 1944330 | 3L_1944330_SNP [dm3] 3L_1944330_SNP [dm6] | G | C | 2.368e-5 | 1 |
NON_SYNONYMOUS_CODING
mu2 |
TF binding site
mE1_TFBS_cad
|
|
2R | 8994548 | 2R_8994548_SNP [dm3] 2R_13107043_SNP [dm6] | C | T | 2.489e-5 | 1 |
INTERGENIC
|
||
3R | 6492186 | 3R_6492186_SNP [dm3] 3R_10666464_SNP [dm6] | G | A | 2.569e-5 | 1 |
INTERGENIC
|
||
2L | 13237776 | 2L_13237776_SNP [dm3] 2L_13237776_SNP [dm6] | A | G | 2.579e-5 | 1 |
INTRON
CG5867 |
||
2L | 16571745 | 2L_16571745_SNP [dm3] 2L_16571745_SNP [dm6] | T | C | 2.632e-5 | 1 |
INTRON
CG42389 |
||
2L | 3248886 | 2L_3248886_SNP [dm3] 2L_3248886_SNP [dm6] | A | T | 2.683e-5 | 1 |
INTERGENIC
|
||
X | 2259029 | X_2259029_SNP [dm3] X_2364996_SNP [dm6] | G | A | 2.803e-5 | 1 |
INTRON
ptr |
TF binding site
mE1_TFBS_HSA
|
|
2R | 17003654 | 2R_17003654_SNP [dm3] 2R_21116149_SNP [dm6] | A | G | 2.893e-5 | 1 |
INTRON
ktub |
||
2L | 1517043 | 2L_1517043_SNP [dm3] 2L_1517043_SNP [dm6] | C | T | 2.990e-5 | 1 |
SYNONYMOUS_CODING
CG18132 DOWNSTREAM halo |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi
|
|
X | 13697533 | X_13697533_SNP [dm3] X_13803500_SNP [dm6] | T | C | 3.147e-5 | 1 |
SYNONYMOUS_CODING
inaE |
TF binding site
BDTNP1_TFBS_Med
|
|
2R | 13585901 | 2R_13585901_SNP [dm3] 2R_17698396_SNP [dm6] | C | A | 3.152e-5 | 1 |
UPSTREAM
Uhg1 & 2 others EXON CR45146 |
TF binding site
BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
2R | 8994835 | 2R_8994835_SNP [dm3] 2R_13107330_SNP [dm6] | A | T | 3.187e-5 | 1 |
INTERGENIC
|
||
3R | 13004800 | 3R_13004800_SNP [dm3] 3R_17179078_SNP [dm6] | C | A | 3.207e-5 | 1 |
INTRON
Mur89F |
||
2R | 8772877 | 2R_8772877_SNP [dm3] 2R_12885372_SNP [dm6] | T | C | 3.295e-5 | 1 |
INTRON
vg |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl |
|
3R | 13004801 | 3R_13004801_SNP [dm3] 3R_17179079_SNP [dm6] | C | A | 3.407e-5 | 1 |
INTRON
Mur89F |
||
2L | 13392923 | 2L_13392923_SNP [dm3] 2L_13392923_SNP [dm6] | T | C | 3.487e-5 | 1 |
NON_SYNONYMOUS_CODING
CG7099 DOWNSTREAM RpL24 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 3249108 | 2L_3249108_SNP [dm3] 2L_3249108_SNP [dm6] | C | T | 3.670e-5 | 1 |
INTERGENIC
|
||
2R | 8772890 | 2R_8772890_SNP [dm3] 2R_12885385_SNP [dm6] | C | A | 3.754e-5 | 1 |
INTRON
vg |
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_Trl |
|
2L | 3164583 | 2L_3164583_SNP [dm3] 2L_3164583_SNP [dm6] | G | A | 3.918e-5 | 1 |
INTRON
Hydr2 |
||
2L | 2811892 | 2L_2811892_SNP [dm3] 2L_2811892_SNP [dm6] | T | C | 3.954e-5 | 1 |
UTR_3_PRIME
daw UPSTREAM CG2964 |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad
|
|
2R | 9018005 | 2R_9018005_SNP [dm3] 2R_13130500_SNP [dm6] | G | A | 3.957e-5 | 1 |
SYNONYMOUS_CODING
CG13326 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2L | 7441598 | 2L_7441598_SNP [dm3] 2L_7441598_SNP [dm6] | A | T | 4.049e-5 | 1 |
UTR_5_PRIME
CG5973 INTRON CG5973 |
||
2L | 16335235 | 2L_16335235_SNP [dm3] 2L_16335235_SNP [dm6] | C | A | 4.081e-5 | 1 |
NON_SYNONYMOUS_CODING
CG31817 |
||
2L | 7441597 | 2L_7441597_SNP [dm3] 2L_7441597_SNP [dm6] | A | G | 4.206e-5 | 1 |
UTR_5_PRIME
CG5973 INTRON CG5973 |
||
3R | 6492099 | 3R_6492099_INS [dm3] 3R_10666377_INS [dm6] | A | AGGGTATAA | 4.214e-5 | 1 |
INTERGENIC
|
||
2R | 10210498 | 2R_10210498_SNP [dm3] 2R_14322993_SNP [dm6] | T | G | 4.353e-5 | 1 |
INTRON
Shroom |
TF binding site
BDTNP1_TFBS_Med
|
|
2L | 16339757 | 2L_16339757_SNP [dm3] 2L_16339757_SNP [dm6] | A | C | 4.428e-5 | 1 |
SYNONYMOUS_CODING
CG42266 DOWNSTREAM CG44405 |
||
2R | 10210502 | 2R_10210502_SNP [dm3] 2R_14322997_SNP [dm6] | C | T | 4.457e-5 | 1 |
INTRON
Shroom |
TF binding site
BDTNP1_TFBS_Med
|
|
3L | 7455308 | 3L_7455308_SNP [dm3] 3L_7462208_SNP [dm6] | G | A | 4.479e-5 | 1 |
INTERGENIC
|
||
2R | 843485 | 2R_843485_SNP [dm3] 2R_4955980_SNP [dm6] | G | T | 4.531e-5 | 1 |
INTRON
Ir41a |
TF binding site
mE1_TFBS_hkb mE1_TFBS_HSA
|
|
2L | 3248125 | 2L_3248125_SNP [dm3] 2L_3248125_SNP [dm6] | T | A | 4.597e-5 | 1 |
INTERGENIC
|
||
2R | 19841531 | 2R_19841531_SNP [dm3] 2R_23954008_SNP [dm6] | C | G | 4.709e-5 | 1 |
UTR_5_PRIME
CG3803 UPSTREAM thoc5 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad
|
|
2L | 12091176 | 2L_12091176_DEL [dm3] 2L_12091176_DEL [dm6] | GG | G | 4.764e-5 | 1 |
UPSTREAM
Pex19 DOWNSTREAM CR44594 INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd |
|
3L | 1944355 | 3L_1944355_SNP [dm3] 3L_1944355_SNP [dm6] | G | A | 4.776e-5 | 1 |
SYNONYMOUS_CODING
mu2 |
TF binding site
mE1_TFBS_cad
|
|
X | 19360244 | X_19360244_SNP [dm3] X_19466211_SNP [dm6] | C | T | 4.857e-5 | 1 |
SYNONYMOUS_CODING
kek5 |
TF binding site
mE1_TFBS_cad
|
|
3R | 10784914 | 3R_10784914_SNP [dm3] 3R_14959192_SNP [dm6] | G | T | 4.861e-5 | 1 |
INTERGENIC
|
||
2R | 3786153 | 2R_3786153_SNP [dm3] 2R_7898648_SNP [dm6] | A | T | 4.938e-5 | 1 |
INTRON
CG30377 |
TF binding site
mE1_TFBS_cad
|
|
2R | 8768447 | 2R_8768447_SNP [dm3] 2R_12880942_SNP [dm6] | G | T | 5.056e-5 | 1 |
SPLICE_SITE_REGION
Aats-asp UPSTREAM Nmda1 DOWNSTREAM CR45141 INTRON Aats-asp |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 3248938 | 2L_3248938_SNP [dm3] 2L_3248938_SNP [dm6] | T | C | 5.090e-5 | 1 |
INTERGENIC
|
||
2R | 10210403 | 2R_10210403_SNP [dm3] 2R_14322898_SNP [dm6] | C | A | 5.156e-5 | 1 |
INTRON
Shroom |
TF binding site
BDTNP1_TFBS_Med
|
|
X | 4385029 | X_4385029_SNP [dm3] X_4490996_SNP [dm6] | G | A | 5.194e-5 | 1 |
INTRON
CR32773 |
||
2L | 3260453 | 2L_3260453_SNP [dm3] 2L_3260453_SNP [dm6] | A | G | 5.205e-5 | 1 |
DOWNSTREAM
CR45337 INTERGENIC |
||
3L | 10541740 | 3L_10541740_SNP [dm3] 3L_10548640_SNP [dm6] | G | C | 5.305e-5 | 1 |
INTRON
A2bp1 |
||
2R | 10210412 | 2R_10210412_SNP [dm3] 2R_14322907_SNP [dm6] | T | A | 5.340e-5 | 1 |
INTRON
Shroom |
TF binding site
BDTNP1_TFBS_Med
|
|
2L | 3327223 | 2L_3327223_SNP [dm3] 2L_3327223_SNP [dm6] | A | G | 5.436e-5 | 1 |
UPSTREAM
CG33282 DOWNSTREAM CG33281 INTERGENIC |
||
2L | 12091100 | 2L_12091100_SNP [dm3] 2L_12091100_SNP [dm6] | G | A | 5.499e-5 | 1 |
UPSTREAM
Pex19 DOWNSTREAM CR44594 INTERGENIC |
regulatory region
REDfly_CRMs
TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd |
|
3R | 23416309 | 3R_23416309_SNP [dm3] 3R_27590587_SNP [dm6] | C | T | 5.632e-5 | 1 |
SYNONYMOUS_CODING
CG5639 |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 22527085 | 3R_22527085_SNP [dm3] 3R_26701363_SNP [dm6] | A | T | 5.706e-5 | 1 |
INTRON
amon |
||
2L | 4856393 | 2L_4856393_SNP [dm3] 2L_4856393_SNP [dm6] | T | C | 5.744e-5 | 1 |
INTRON
pog |
||
3R | 6547469 | 3R_6547469_SNP [dm3] 3R_10721747_SNP [dm6] | A | G | 5.908e-5 | 1 |
INTERGENIC
|
||
2L | 16501212 | 2L_16501212_SNP [dm3] 2L_16501212_SNP [dm6] | A | C | 6.044e-5 | 1 |
UPSTREAM
Tpr2 INTRON Tpr2 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 15657290 | 3L_15657290_SNP [dm3] 3L_15664190_SNP [dm6] | T | G | 6.135e-5 | 1 |
INTERGENIC
|
||
2L | 5645385 | 2L_5645385_SNP [dm3] 2L_5645385_SNP [dm6] | A | G | 6.289e-5 | 1 |
INTRON
CG31646 |
||
3L | 3808501 | 3L_3808501_SNP [dm3] 3L_3808501_SNP [dm6] | C | T | 6.341e-5 | 1 |
SYNONYMOUS_CODING
IntS10 DOWNSTREAM CG32262 |
||
2R | 10206125 | 2R_10206125_SNP [dm3] 2R_14318620_SNP [dm6] | A | T | 6.430e-5 | 1 |
INTRON
Shroom |
||
2R | 18257790 | 2R_18257790_SNP [dm3] 2R_22370285_SNP [dm6] | G | T | 6.463e-5 | 1 |
INTRON
Liprin-gamma |
||
3R | 6481093 | 3R_6481093_SNP [dm3] 3R_10655371_SNP [dm6] | C | G | 6.484e-5 | 1 |
INTERGENIC
|
||
2R | 9230673 | 2R_9230673_SNP [dm3] 2R_13343168_SNP [dm6] | G | T | 6.525e-5 | 1 |
INTRON
CR44206 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi
|
|
2R | 835081 | 2R_835081_DEL [dm3] 2R_4947576_DEL [dm6] | ATTAAACG | A | 6.642e-5 | 1 |
INTRON
Ir41a |
||
3R | 22435005 | 3R_22435005_SNP [dm3] 3R_26609283_SNP [dm6] | T | A | 6.649e-5 | 1 |
DOWNSTREAM
CR44951 INTERGENIC |
||
2R | 10442834 | 2R_10442834_SNP [dm3] 2R_14555329_SNP [dm6] | C | T | 6.738e-5 | 1 |
INTRON
ttv |