DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=3.705e^-12)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
wolba	0.08175
In_2L_t	0.02902
In_2R_NS	0.08410
In_3R_Mo	0.04730

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_2L_t	6.6811	0.0354
In_3R_K	5.507	0.0637

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2240 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	15055734	3L_15055734_SNP [dm3] 3L_15062634_SNP [dm6]	T	C	3.712e^-7	0.536	UPSTREAM CG13460 & 1 other INTRON Sytbeta
3L	11142376	3L_11142376_SNP [dm3] 3L_11149276_SNP [dm6]	G	A	7.161e^-7	0.536	DOWNSTREAM CG6216 INTRON CG32082
3L	15881100	3L_15881100_SNP [dm3] 3L_15888000_SNP [dm6]	A	G	1.817e^-6	0.536	INTRON pHCl
3L	8675181	3L_8675181_SNP [dm3] 3L_8682081_SNP [dm6]	G	A	1.823e^-6	0.536	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens
3L	15889722	3L_15889722_SNP [dm3] 3L_15896622_SNP [dm6]	A	G	1.867e^-6	0.536	INTRON pHCl
2R	9269114	2R_9269114_SNP [dm3] 2R_13381609_SNP [dm6]	T	G	1.970e^-6	0.536	INTERGENIC
3L	7330950	3L_7330950_SNP [dm3] 3L_7337850_SNP [dm6]	T	C	1.999e^-6	0.536	NON_SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	7331186	3L_7331186_SNP [dm3] 3L_7338086_SNP [dm6]	C	T	2.722e^-6	0.594	NON_SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	15886584	3L_15886584_SNP [dm3] 3L_15893484_SNP [dm6]	G	A	2.986e^-6	0.594	INTRON pHCl
2R	16921396	2R_16921396_SNP [dm3] 2R_21033891_SNP [dm6]	A	C	3.166e^-6	0.594	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	17618570	3R_17618570_SNP [dm3] 3R_21792848_SNP [dm6]	A	G	4.356e^-6	0.694	INTRON CASK	TF binding site mE1_TFBS_cad
2L	11334482	2L_11334482_INS [dm3] 2L_11334482_INS [dm6]	G	GG	4.688e^-6	0.694	INTERGENIC
3R	17370221	3R_17370221_SNP [dm3] 3R_21544499_SNP [dm6]	C	A	4.886e^-6	0.694	INTERGENIC	TF binding site BDTNP1_TFBS_prd
3L	7799372	3L_7799372_SNP [dm3] 3L_7806272_SNP [dm6]	T	G	5.894e^-6	0.694	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
X	5449728	X_5449728_SNP [dm3] X_5555695_SNP [dm6]	C	A	5.900e^-6	0.694	INTRON Vsx2	TF binding site mE1_TFBS_cnc mE1_TFBS_Kr
2R	9269238	2R_9269238_SNP [dm3] 2R_13381733_SNP [dm6]	G	A	5.920e^-6	0.694	INTERGENIC
3R	24205174	3R_24205174_SNP [dm3] 3R_28379452_SNP [dm6]	A	G	7.008e^-6	0.709	INTERGENIC
3R	10249528	3R_10249528_SNP [dm3] 3R_14423806_SNP [dm6]	A	G	7.604e^-6	0.709	INTRON cv-c
3L	16235259	3L_16235259_SNP [dm3] 3L_16242159_SNP [dm6]	A	G	8.423e^-6	0.709	INTERGENIC
3L	4410601	3L_4410601_SNP [dm3] 3L_4410601_SNP [dm6]	T	C	9.057e^-6	0.709	INTRON DOR	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
2R	9269202	2R_9269202_SNP [dm3] 2R_13381697_SNP [dm6]	G	A	9.198e^-6	0.709	INTERGENIC
X	2698884	X_2698884_SNP [dm3] X_2804851_SNP [dm6]	A	C	9.722e^-6	0.709	INTRON kirre	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	7799375	3L_7799375_SNP [dm3] 3L_7806275_SNP [dm6]	C	T	1.004e^-5	0.709	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
2R	6058050	2R_6058050_SNP [dm3] 2R_10170545_SNP [dm6]	C	T	1.026e^-5	0.709	INTRON KCNQ
2R	9269197	2R_9269197_SNP [dm3] 2R_13381692_SNP [dm6]	A	G	1.034e^-5	0.709	INTERGENIC
3L	4410596	3L_4410596_SNP [dm3] 3L_4410596_SNP [dm6]	T	A	1.042e^-5	0.709	INTRON DOR	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3L	4410589	3L_4410589_SNP [dm3] 3L_4410589_SNP [dm6]	T	G	1.048e^-5	0.709	INTRON DOR	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3L	15884162	3L_15884162_SNP [dm3] 3L_15891062_SNP [dm6]	A	G	1.082e^-5	0.709	INTRON pHCl
3L	8634391	3L_8634391_SNP [dm3] 3L_8641291_SNP [dm6]	T	A	1.122e^-5	0.709	INTRON Cpr66D
3L	14941736	3L_14941736_SNP [dm3] 3L_14948636_SNP [dm6]	G	A	1.199e^-5	0.709	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3L	15889772	3L_15889772_SNP [dm3] 3L_15896672_SNP [dm6]	G	A	1.232e^-5	0.709	INTRON pHCl
2R	10200612	2R_10200612_SNP [dm3] 2R_14313107_SNP [dm6]	G	A	1.378e^-5	0.709	INTRON Shroom	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	18651406	3R_18651406_SNP [dm3] 3R_22825684_SNP [dm6]	C	T	1.408e^-5	0.709	EXON CR44350
3R	21279810	3R_21279810_INS [dm3] 3R_25454088_INS [dm6]	G	GCACTTATAAGTGTAAG...	1.466e^-5	0.709	INTRON Fur1
3L	7799380	3L_7799380_SNP [dm3] 3L_7806280_SNP [dm6]	G	A	1.494e^-5	0.709	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
2R	10956731	2R_10956731_SNP [dm3] 2R_15069226_SNP [dm6]	C	T	1.511e^-5	0.709	INTERGENIC
3L	23033953	3L_23033953_SNP [dm3] 3L_23040853_SNP [dm6]	T	A	1.522e^-5	0.709	DOWNSTREAM nrm INTERGENIC
3L	4710364	3L_4710364_SNP [dm3] 3L_4710364_SNP [dm6]	T	A	1.538e^-5	0.709	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	17365836	3R_17365836_SNP [dm3] 3R_21540114_SNP [dm6]	A	T	1.581e^-5	0.709	INTERGENIC
3L	7799352	3L_7799352_SNP [dm3] 3L_7806252_SNP [dm6]	C	T	1.614e^-5	0.709	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3R	9738642	3R_9738642_SNP [dm3] 3R_13912920_SNP [dm6]	T	G	1.643e^-5	0.709	INTERGENIC	TF binding site mE1_TFBS_inv
2L	2671552	2L_2671552_SNP [dm3] 2L_2671552_SNP [dm6]	G	C	1.658e^-5	0.709	SYNONYMOUS_CODING Gr23a INTRON Gr23a	TF binding site mE1_TFBS_sens
2R	17767855	2R_17767855_SNP [dm3] 2R_21880350_SNP [dm6]	G	A	1.669e^-5	0.709	INTRON Fili	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	2318258	2L_2318258_SNP [dm3] 2L_2318258_SNP [dm6]	T	A	1.796e^-5	0.709	INTRON CG9967 & 1 other
3L	4710366	3L_4710366_SNP [dm3] 3L_4710366_SNP [dm6]	C	T	1.859e^-5	0.709	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	995863	3L_995863_SNP [dm3] 3L_995863_SNP [dm6]	G	T	1.910e^-5	0.709	DOWNSTREAM trio & 1 other INTERGENIC
X	2540756	X_2540756_SNP [dm3] X_2646723_SNP [dm6]	C	G	1.940e^-5	0.709	UTR_5_PRIME sgg INTRON sgg	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	4710349	3L_4710349_SNP [dm3] 3L_4710349_SNP [dm6]	A	G	1.941e^-5	0.709	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4710350	3L_4710350_DEL [dm3] 3L_4710350_DEL [dm6]	TAGAT	T	1.941e^-5	0.709	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4710363	3L_4710363_SNP [dm3] 3L_4710363_SNP [dm6]	G	A	1.941e^-5	0.709	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9882385	3R_9882385_DEL [dm3] 3R_14056663_DEL [dm6]	ATAG	T	1.974e^-5	0.709	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	9269137	2R_9269137_SNP [dm3] 2R_13381632_SNP [dm6]	T	A	2.118e^-5	0.709	INTERGENIC
2L	4523664	2L_4523664_SNP [dm3] 2L_4523664_SNP [dm6]	A	C	2.119e^-5	0.709	INTRON dp
3L	8607436	3L_8607436_SNP [dm3] 3L_8614336_SNP [dm6]	C	T	2.128e^-5	0.709	INTRON CG6282
2R	14762500	2R_14762500_SNP [dm3] 2R_18874995_SNP [dm6]	A	C	2.164e^-5	0.709	INTERGENIC
3L	4710377	3L_4710377_DEL [dm3] 3L_4710377_DEL [dm6]	AG	A	2.165e^-5	0.709	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	3574190	2L_3574190_SNP [dm3] 2L_3574190_SNP [dm6]	C	T	2.191e^-5	0.709	INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_cad mE1_TFBS_Trl
2L	4523681	2L_4523681_SNP [dm3] 2L_4523681_SNP [dm6]	G	A	2.192e^-5	0.709	INTRON dp
2R	9269124	2R_9269124_DEL [dm3] 2R_13381619_DEL [dm6]	TG	T	2.242e^-5	0.713	INTERGENIC
2R	9269128	2R_9269128_SNP [dm3] 2R_13381623_SNP [dm6]	A	T	2.378e^-5	0.728	INTERGENIC
3L	7799586	3L_7799586_SNP [dm3] 3L_7806486_SNP [dm6]	G	C	2.409e^-5	0.728	INTRON CG32369	TF binding site mE1_TFBS_Trl
2R	9269117	2R_9269117_DEL [dm3] 2R_13381612_DEL [dm6]	AAAGA	TCT	2.420e^-5	0.728	INTERGENIC
3R	25919979	3R_25919979_SNP [dm3] 3R_30094257_SNP [dm6]	T	G	2.461e^-5	0.728	INTRON sima	TF binding site mE1_TFBS_inv
2R	17427710	2R_17427710_SNP [dm3] 2R_21540205_SNP [dm6]	G	A	2.486e^-5	0.728	UPSTREAM CG33226 INTRON Egfr & 1 other	TF binding site mE1_TFBS_D mE1_TFBS_HSA
2L	13539501	2L_13539501_SNP [dm3] 2L_13539501_SNP [dm6]	G	A	2.571e^-5	0.732	INTRON B4
3L	4709865	3L_4709865_SNP [dm3] 3L_4709865_SNP [dm6]	T	C	2.620e^-5	0.732	UTR_5_PRIME CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4709870	3L_4709870_SNP [dm3] 3L_4709870_SNP [dm6]	A	C	2.620e^-5	0.732	UTR_5_PRIME CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	19703870	3R_19703870_SNP [dm3] 3R_23878148_SNP [dm6]	A	G	2.729e^-5	0.732	INTRON Pli
2L	3587900	2L_3587900_SNP [dm3] 2L_3587900_SNP [dm6]	G	A	2.837e^-5	0.732	DOWNSTREAM CR43823 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
2L	7812417	2L_7812417_SNP [dm3] 2L_7812417_SNP [dm6]	C	A	2.867e^-5	0.732	INTRON LanB1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	9819590	3L_9819590_SNP [dm3] 3L_9826490_SNP [dm6]	A	C	2.881e^-5	0.732	SYNONYMOUS_CODING CG43897 INTRON CG43897
3R	5366433	3R_5366433_SNP [dm3] 3R_9540711_SNP [dm6]	A	T	2.951e^-5	0.732	SYNONYMOUS_CODING mura	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9819557	3L_9819557_SNP [dm3] 3L_9826457_SNP [dm6]	C	A	2.987e^-5	0.732	SYNONYMOUS_CODING CG43897 INTRON CG43897
3L	7799176	3L_7799176_SNP [dm3] 3L_7806076_SNP [dm6]	T	C	2.996e^-5	0.732	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
3L	5775282	3L_5775282_SNP [dm3] 3L_5782182_SNP [dm6]	A	C	3.029e^-5	0.732	NON_SYNONYMOUS_CODING PGRP-LD UTR_3_PRIME Pmi
3L	11444323	3L_11444323_SNP [dm3] 3L_11451223_SNP [dm6]	C	G	3.033e^-5	0.732	INTERGENIC
2R	11618430	2R_11618430_SNP [dm3] 2R_15730925_SNP [dm6]	T	G	3.113e^-5	0.732	INTRON CG30089	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	11618438	2R_11618438_SNP [dm3] 2R_15730933_SNP [dm6]	T	A	3.113e^-5	0.732	INTRON CG30089	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	7813951	2L_7813951_SNP [dm3] 2L_7813951_SNP [dm6]	T	C	3.152e^-5	0.732	UPSTREAM LanB1 INTRON LanB1
2L	2671684	2L_2671684_SNP [dm3] 2L_2671684_SNP [dm6]	C	T	3.180e^-5	0.732	SYNONYMOUS_CODING Gr23a INTRON Gr23a
3L	22641876	3L_22641876_SNP [dm3] 3L_22648776_SNP [dm6]	G	A	3.181e^-5	0.732	UPSTREAM CG33771 DOWNSTREAM CG33769 INTRON CG33770
3L	16887438	3L_16887438_SNP [dm3] 3L_16894338_SNP [dm6]	A	G	3.279e^-5	0.732	INTRON Lmpt
3L	18364980	3L_18364980_SNP [dm3] 3L_18371880_SNP [dm6]	C	T	3.308e^-5	0.732	INTERGENIC
2R	17092769	2R_17092769_SNP [dm3] 2R_21205264_SNP [dm6]	T	C	3.318e^-5	0.732	SYNONYMOUS_CODING Glycogenin INTRON CG44245
3L	12853276	3L_12853276_SNP [dm3] 3L_12860176_SNP [dm6]	G	A	3.384e^-5	0.732	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	18651445	3R_18651445_SNP [dm3] 3R_22825723_SNP [dm6]	G	A	3.396e^-5	0.732	EXON CR44350
X	14247752	X_14247752_SNP [dm3] X_14353719_SNP [dm6]	C	T	3.495e^-5	0.732	INTRON dpr8
3L	9252399	3L_9252399_SNP [dm3] 3L_9259299_SNP [dm6]	T	A	3.552e^-5	0.732	INTRON GluRIB	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	12519071	3L_12519071_SNP [dm3] 3L_12525971_SNP [dm6]	A	T	3.646e^-5	0.732	DOWNSTREAM ver INTRON eIF-2beta	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	9252371	3L_9252371_SNP [dm3] 3L_9259271_SNP [dm6]	T	A	3.653e^-5	0.732	INTRON GluRIB	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	19601518	2R_19601518_SNP [dm3] 2R_23713995_SNP [dm6]	C	T	3.714e^-5	0.732	UTR_5_PRIME Sesn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	5449785	X_5449785_SNP [dm3] X_5555752_SNP [dm6]	G	A	3.714e^-5	0.732	INTRON Vsx2	TF binding site mE1_TFBS_Kr
3L	9627046	3L_9627046_SNP [dm3] 3L_9633946_SNP [dm6]	G	A	3.716e^-5	0.732	INTRON fry	TF binding site mE1_TFBS_cad
2R	7719578	2R_7719578_SNP [dm3] 2R_11832073_SNP [dm6]	A	G	3.752e^-5	0.732	INTRON Sobp	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	4749581	2L_4749581_SNP [dm3] 2L_4749581_SNP [dm6]	C	A	3.791e^-5	0.732	INTRON CG15630
2L	4023666	2L_4023666_SNP [dm3] 2L_4023666_SNP [dm6]	G	A	3.823e^-5	0.732	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	996409	3L_996409_SNP [dm3] 3L_996409_SNP [dm6]	T	C	3.853e^-5	0.732	UTR_3_PRIME trio DOWNSTREAM CG12038 & 1 other
3R	18651398	3R_18651398_SNP [dm3] 3R_22825676_SNP [dm6]	C	T	3.857e^-5	0.732	EXON CR44350
3R	17618547	3R_17618547_SNP [dm3] 3R_21792825_SNP [dm6]	C	A	3.894e^-5	0.732	INTRON CASK	TF binding site mE1_TFBS_cad
2R	14383138	2R_14383138_SNP [dm3] 2R_18495633_SNP [dm6]	T	A	3.996e^-5	0.732	INTRON CG30116
3L	6391688	3L_6391688_SNP [dm3] 3L_6398588_SNP [dm6]	A	T	4.024e^-5	0.732	INTERGENIC
2R	14762345	2R_14762345_SNP [dm3] 2R_18874840_SNP [dm6]	C	A	4.073e^-5	0.732	INTERGENIC
3L	9627055	3L_9627055_SNP [dm3] 3L_9633955_SNP [dm6]	G	A	4.180e^-5	0.732	INTRON fry	TF binding site mE1_TFBS_cad
3L	7330678	3L_7330678_SNP [dm3] 3L_7337578_SNP [dm6]	T	C	4.208e^-5	0.732	SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	5648003	3R_5648003_SNP [dm3] 3R_9822281_SNP [dm6]	A	G	4.235e^-5	0.732	DOWNSTREAM CG34302 INTERGENIC
2R	16020141	2R_16020141_SNP [dm3] 2R_20132636_SNP [dm6]	C	T	4.243e^-5	0.732	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	18638378	2R_18638378_SNP [dm3] 2R_22750873_SNP [dm6]	G	A	4.255e^-5	0.732	INTRON CG42260	TF binding site mE1_TFBS_inv
2L	5160017	2L_5160017_SNP [dm3] 2L_5160017_SNP [dm6]	G	T	4.313e^-5	0.732	SYNONYMOUS_CODING Msp300 INTRON Msp300
X	14685801	X_14685801_SNP [dm3] X_14791768_SNP [dm6]	C	T	4.358e^-5	0.732	NON_SYNONYMOUS_CODING rut INTRON rut	TF binding site mE1_TFBS_chinmo
2R	14278972	2R_14278972_SNP [dm3] 2R_18391467_SNP [dm6]	G	T	4.386e^-5	0.732	UPSTREAM CG15068 INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	14134595	3L_14134595_DEL [dm3] 3L_14141495_DEL [dm6]	AAA	A	4.399e^-5	0.732	INTERGENIC	regulatory region REDfly_CRMs
3L	10694897	3L_10694897_SNP [dm3] 3L_10701797_SNP [dm6]	T	A	4.405e^-5	0.732	INTERGENIC
3L	9819560	3L_9819560_SNP [dm3] 3L_9826460_SNP [dm6]	A	C	4.436e^-5	0.732	SYNONYMOUS_CODING CG43897 INTRON CG43897
3L	995306	3L_995306_SNP [dm3] 3L_995306_SNP [dm6]	A	C	4.451e^-5	0.732	SYNONYMOUS_CODING CG12038 DOWNSTREAM trio	TF binding site mE1_TFBS_cad
3L	7799451	3L_7799451_SNP [dm3] 3L_7806351_SNP [dm6]	T	G	4.634e^-5	0.743	INTRON CG32369	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	12853279	3L_12853279_SNP [dm3] 3L_12860179_SNP [dm6]	A	G	4.698e^-5	0.743	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	8646763	3L_8646763_SNP [dm3] 3L_8653663_SNP [dm6]	C	T	4.720e^-5	0.743	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	7812421	2L_7812421_SNP [dm3] 2L_7812421_SNP [dm6]	A	G	4.737e^-5	0.743	INTRON LanB1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	3646201	2L_3646201_SNP [dm3] 2L_3646201_SNP [dm6]	A	T	4.800e^-5	0.743	UPSTREAM for INTRON for
3L	12853414	3L_12853414_SNP [dm3] 3L_12860314_SNP [dm6]	A	G	4.839e^-5	0.743	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_sens
2R	10200294	2R_10200294_SNP [dm3] 2R_14312789_SNP [dm6]	G	T	4.912e^-5	0.743	INTRON Shroom	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	10597846	2R_10597846_INS [dm3] 2R_14710341_INS [dm6]	A	AA	4.918e^-5	0.743	INTRON mspo
3L	17219151	3L_17219151_SNP [dm3] 3L_17226051_SNP [dm6]	G	T	4.919e^-5	0.743	INTRON Rbp6
3R	25919178	3R_25919178_SNP [dm3] 3R_30093456_SNP [dm6]	A	G	4.944e^-5	0.743	INTRON sima
2L	9445497	2L_9445497_SNP [dm3] 2L_9445497_SNP [dm6]	C	T	4.979e^-5	0.743	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	15696990	3R_15696990_SNP [dm3] 3R_19871268_SNP [dm6]	A	G	4.992e^-5	0.743	INTRON CG4562	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	17055258	3R_17055258_SNP [dm3] 3R_21229536_SNP [dm6]	T	G	5.153e^-5	0.761	DOWNSTREAM e & 1 other INTERGENIC
3R	17055240	3R_17055240_SNP [dm3] 3R_21229518_SNP [dm6]	A	C	5.251e^-5	0.763	DOWNSTREAM e & 1 other INTERGENIC
X	17243971	X_17243971_SNP [dm3] X_17349938_SNP [dm6]	C	T	5.511e^-5	0.763	INTERGENIC
3R	10215088	3R_10215088_SNP [dm3] 3R_14389366_SNP [dm6]	A	T	5.530e^-5	0.763	INTERGENIC
2R	15038134	2R_15038134_SNP [dm3] 2R_19150629_SNP [dm6]	T	A	5.608e^-5	0.763	INTRON ena	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	14093822	3R_14093822_SNP [dm3] 3R_18268100_SNP [dm6]	C	A	5.673e^-5	0.763	INTRON CG18599	TF binding site mE1_TFBS_HSA mE1_TFBS_run
2R	2121447	2R_2121447_SNP [dm3] 2R_6233942_SNP [dm6]	T	C	5.702e^-5	0.763	SYNONYMOUS_CODING bin3	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	2502058	2L_2502058_SNP [dm3] 2L_2502058_SNP [dm6]	T	A	5.734e^-5	0.763	INTERGENIC
X	6323115	X_6323115_SNP [dm3] X_6429082_SNP [dm6]	T	G	5.735e^-5	0.763	INTRON CG42340
3R	25070301	3R_25070301_SNP [dm3] 3R_29244579_SNP [dm6]	T	C	5.859e^-5	0.763	UPSTREAM CG31445 DOWNSTREAM SP1029 INTRON CG31445
3L	16337267	3L_16337267_SNP [dm3] 3L_16344167_SNP [dm6]	C	T	5.950e^-5	0.763	SYNONYMOUS_CODING CG4998	TF binding site mE1_TFBS_cad
2L	9645124	2L_9645124_SNP [dm3] 2L_9645124_SNP [dm6]	A	C	5.955e^-5	0.763	SYNONYMOUS_CODING Apoltp
2L	9445602	2L_9445602_SNP [dm3] 2L_9445602_SNP [dm6]	A	C	6.154e^-5	0.763	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
2L	8258562	2L_8258562_SNP [dm3] 2L_8258562_SNP [dm6]	T	C	6.174e^-5	0.763	UTR_3_PRIME Btk29A DOWNSTREAM mir-2b-1 & 1 other
2L	2671530	2L_2671530_SNP [dm3] 2L_2671530_SNP [dm6]	C	G	6.373e^-5	0.763	NON_SYNONYMOUS_CODING Gr23a INTRON Gr23a	TF binding site mE1_TFBS_sens
2R	15569392	2R_15569392_DEL [dm3] 2R_19681887_DEL [dm6]	TCTCAAGTAT	T	6.470e^-5	0.763	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
3L	15884156	3L_15884156_INS [dm3] 3L_15891056_INS [dm6]	C	GCATACTATA	6.558e^-5	0.763	INTRON pHCl
2R	8294112	2R_8294112_SNP [dm3] 2R_12406607_SNP [dm6]	T	C	6.578e^-5	0.763	UTR_3_PRIME Cpr49Af DOWNSTREAM Cpr49Af
3L	7335039	3L_7335039_SNP [dm3] 3L_7341939_SNP [dm6]	T	A	6.596e^-5	0.763	UTR_3_PRIME CG8596 DOWNSTREAM lark	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	9269155	2R_9269155_SNP [dm3] 2R_13381650_SNP [dm6]	T	C	6.608e^-5	0.763	INTERGENIC
3L	5523009	3L_5523009_SNP [dm3] 3L_5529909_SNP [dm6]	A	T	6.623e^-5	0.763	UPSTREAM Lkr INTERGENIC
3R	26409360	3R_26409360_SNP [dm3] 3R_30583638_SNP [dm6]	C	A	6.640e^-5	0.763	UTR_5_PRIME Rpt6R DOWNSTREAM CG9717	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
3L	14333618	3L_14333618_SNP [dm3] 3L_14340518_SNP [dm6]	G	T	6.652e^-5	0.763	INTRON fz	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	3865828	3R_3865828_SNP [dm3] 3R_8040106_SNP [dm6]	A	C	6.684e^-5	0.763	DOWNSTREAM CR44936 INTERGENIC
3R	9226420	3R_9226420_SNP [dm3] 3R_13400698_SNP [dm6]	C	T	6.754e^-5	0.763	INTRON CG9796	TF binding site mE1_TFBS_Trl
3R	12957663	3R_12957663_SNP [dm3] 3R_17131941_SNP [dm6]	G	A	6.819e^-5	0.763	SYNONYMOUS_CODING CG4053 UPSTREAM CG31266	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	24204667	3R_24204667_SNP [dm3] 3R_28378945_SNP [dm6]	C	T	6.853e^-5	0.763	INTERGENIC
3L	1414405	3L_1414405_SNP [dm3] 3L_1414405_SNP [dm6]	C	T	6.893e^-5	0.763	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	450240	3L_450240_SNP [dm3] 3L_450240_SNP [dm6]	T	C	6.895e^-5	0.763	INTRON klar
2R	18450347	2R_18450347_SNP [dm3] 2R_22562842_SNP [dm6]	G	A	6.916e^-5	0.763	UTR_3_PRIME CG11362 UPSTREAM px DOWNSTREAM dnr1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	27232436	3R_27232436_SNP [dm3] 3R_31406714_SNP [dm6]	C	T	7.014e^-5	0.763	INTRON Gprk2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	12246604	3R_12246604_DEL [dm3] 3R_16420882_DEL [dm6]	AA	A	7.075e^-5	0.763	INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	2513204	X_2513204_SNP [dm3] X_2619171_SNP [dm6]	T	A	7.079e^-5	0.763	SYNONYMOUS_CODING Tsp3A UPSTREAM Seipin	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	9445624	2L_9445624_SNP [dm3] 2L_9445624_SNP [dm6]	G	T	7.081e^-5	0.763	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
3L	4710296	3L_4710296_SNP [dm3] 3L_4710296_SNP [dm6]	A	C	7.121e^-5	0.763	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3277183	3L_3277183_SNP [dm3] 3L_3277183_SNP [dm6]	C	G	7.136e^-5	0.763	DOWNSTREAM CG14960 INTERGENIC	TF binding site mE1_TFBS_bab1
3L	4710383	3L_4710383_DEL [dm3] 3L_4710383_DEL [dm6]	CAATTCAATTATTC...	C	7.176e^-5	0.763	UPSTREAM CG13712 INTRON RhoGEF64C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	16175596	2R_16175596_SNP [dm3] 2R_20288091_SNP [dm6]	C	T	7.195e^-5	0.763	SYNONYMOUS_CODING CG34199 UPSTREAM CG16868 DOWNSTREAM Cpr56F
2L	2261692	2L_2261692_SNP [dm3] 2L_2261692_SNP [dm6]	A	T	7.251e^-5	0.763	INTERGENIC
3R	14093531	3R_14093531_SNP [dm3] 3R_18267809_SNP [dm6]	G	C	7.309e^-5	0.763	UTR_5_PRIME CG18599	TF binding site mE1_TFBS_run
3R	17618513	3R_17618513_SNP [dm3] 3R_21792791_SNP [dm6]	A	C	7.353e^-5	0.763	INTRON CASK	TF binding site mE1_TFBS_cad
2R	9269131	2R_9269131_SNP [dm3] 2R_13381626_SNP [dm6]	T	C	7.356e^-5	0.763	INTERGENIC
3R	11506117	3R_11506117_INS [dm3] 3R_15680395_INS [dm6]	A	ACA	7.409e^-5	0.763	INTRON pxb
3L	9616749	3L_9616749_SNP [dm3] 3L_9623649_SNP [dm6]	T	C	7.414e^-5	0.763	UTR_3_PRIME LanB2 UPSTREAM CG3335
2R	18638347	2R_18638347_SNP [dm3] 2R_22750842_SNP [dm6]	G	T	7.437e^-5	0.763	INTRON CG42260	TF binding site mE1_TFBS_inv
2L	7493359	2L_7493359_SNP [dm3] 2L_7493359_SNP [dm6]	C	G	7.531e^-5	0.763	INTRON Ziz
2R	10202943	2R_10202943_SNP [dm3] 2R_14315438_SNP [dm6]	T	C	7.603e^-5	0.763	NON_SYNONYMOUS_CODING Shroom	TF binding site mE1_TFBS_cad
3L	8647001	3L_8647001_SNP [dm3] 3L_8653901_SNP [dm6]	C	T	7.616e^-5	0.763	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	11924188	3L_11924188_SNP [dm3] 3L_11931088_SNP [dm6]	T	C	7.678e^-5	0.763	INTRON CG44837 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	3242594	2L_3242594_SNP [dm3] 2L_3242594_SNP [dm6]	G	T	7.729e^-5	0.763	INTERGENIC
3R	10215108	3R_10215108_SNP [dm3] 3R_14389386_SNP [dm6]	C	T	7.767e^-5	0.763	INTERGENIC
3L	2392464	3L_2392464_SNP [dm3] 3L_2392464_SNP [dm6]	A	G	7.844e^-5	0.763	INTRON CG45186
3R	11707146	3R_11707146_SNP [dm3] 3R_15881424_SNP [dm6]	T	G	7.849e^-5	0.763	INTERGENIC
3L	9566611	3L_9566611_SNP [dm3] 3L_9573511_SNP [dm6]	A	C	7.858e^-5	0.763	INTRON CG42673
3R	25919024	3R_25919024_SNP [dm3] 3R_30093302_SNP [dm6]	G	A	7.872e^-5	0.763	INTRON sima
3L	14372394	3L_14372394_SNP [dm3] 3L_14379294_SNP [dm6]	C	T	7.881e^-5	0.763	INTERGENIC
3R	15696996	3R_15696996_SNP [dm3] 3R_19871274_SNP [dm6]	A	G	7.910e^-5	0.763	INTRON CG4562	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	16175408	2R_16175408_SNP [dm3] 2R_20287903_SNP [dm6]	C	A	7.921e^-5	0.763	NON_SYNONYMOUS_CODING CG34199 UPSTREAM CG16868 DOWNSTREAM Cpr56F
3L	15889043	3L_15889043_SNP [dm3] 3L_15895943_SNP [dm6]	T	C	7.925e^-5	0.763	INTRON pHCl
X	3426860	X_3426860_SNP [dm3] X_3532827_SNP [dm6]	T	G	7.937e^-5	0.763	INTRON CG32791
2R	11666081	2R_11666081_SNP [dm3] 2R_15778576_SNP [dm6]	A	G	7.956e^-5	0.763	INTRON Zasp52
3R	23477228	3R_23477228_SNP [dm3] 3R_27651506_SNP [dm6]	G	A	7.994e^-5	0.763	UTR_3_PRIME tau UPSTREAM tau INTRON tau
3L	23043782	3L_23043782_INS [dm3] 3L_23050682_INS [dm6]	C	CCCTCCAGAC	8.000e^-5	0.763	INTERGENIC	transposable element FlyBase
3L	8645748	3L_8645748_SNP [dm3] 3L_8652648_SNP [dm6]	G	A	8.032e^-5	0.763	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_sens
2L	9551241	2L_9551241_SNP [dm3] 2L_9551241_SNP [dm6]	C	G	8.033e^-5	0.763	UPSTREAM jp INTRON jp
2L	2261655	2L_2261655_SNP [dm3] 2L_2261655_SNP [dm6]	G	A	8.036e^-5	0.763	INTERGENIC
3R	21279837	3R_21279837_SNP [dm3] 3R_25454115_SNP [dm6]	T	C	8.041e^-5	0.763	INTRON Fur1
X	16055500	X_16055500_SNP [dm3] X_16161467_SNP [dm6]	G	A	8.071e^-5	0.763	INTERGENIC
3L	12663205	3L_12663205_SNP [dm3] 3L_12670105_SNP [dm6]	G	C	8.091e^-5	0.763	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	7548618	2R_7548618_SNP [dm3] 2R_11661113_SNP [dm6]	G	A	8.124e^-5	0.763	UPSTREAM tRNA:M2:48Bb INTRON Roc2	TF binding site BDTNP1_TFBS_dl
3R	25930717	3R_25930717_INS [dm3] 3R_30104995_INS [dm6]	T	TGTATAAATAGT...	8.156e^-5	0.763	INTRON sima
2L	4523353	2L_4523353_SNP [dm3] 2L_4523353_SNP [dm6]	T	C	8.241e^-5	0.763	SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad
3R	10373078	3R_10373078_SNP [dm3] 3R_14547356_SNP [dm6]	G	T	8.273e^-5	0.763	INTRON Pde6
2L	4505507	2L_4505507_SNP [dm3] 2L_4505507_SNP [dm6]	G	A	8.297e^-5	0.763	SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	15884213	3L_15884213_SNP [dm3] 3L_15891113_SNP [dm6]	C	A	8.342e^-5	0.763	INTRON pHCl
3R	9882250	3R_9882250_SNP [dm3] 3R_14056528_SNP [dm6]	A	G	8.348e^-5	0.763	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	2649508	2L_2649508_SNP [dm3] 2L_2649508_SNP [dm6]	G	A	8.395e^-5	0.763	SYNONYMOUS_CODING CG33125 UTR_3_PRIME CG33125
2L	9551237	2L_9551237_SNP [dm3] 2L_9551237_SNP [dm6]	A	C	8.512e^-5	0.763	UPSTREAM jp INTRON jp
2R	6641274	2R_6641274_SNP [dm3] 2R_10753769_SNP [dm6]	T	G	8.517e^-5	0.763	INTRON CG33144
2L	5159968	2L_5159968_SNP [dm3] 2L_5159968_SNP [dm6]	T	A	8.521e^-5	0.763	NON_SYNONYMOUS_CODING Msp300 INTRON Msp300
3L	7069602	3L_7069602_SNP [dm3] 3L_7076502_SNP [dm6]	C	G	8.537e^-5	0.763	INTRON CG8641
2R	14762153	2R_14762153_SNP [dm3] 2R_18874648_SNP [dm6]	C	A	8.550e^-5	0.763	INTERGENIC
2L	9445547	2L_9445547_SNP [dm3] 2L_9445547_SNP [dm6]	A	T	8.631e^-5	0.763	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	9445562	2L_9445562_SNP [dm3] 2L_9445562_SNP [dm6]	T	A	8.631e^-5	0.763	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
3L	17706215	3L_17706215_SNP [dm3] 3L_17713115_SNP [dm6]	G	A	8.690e^-5	0.763	INTRON Ccn
3L	17706216	3L_17706216_SNP [dm3] 3L_17713116_SNP [dm6]	A	T	8.690e^-5	0.763	INTRON Ccn
2L	2261709	2L_2261709_SNP [dm3] 2L_2261709_SNP [dm6]	G	C	8.810e^-5	0.763	INTERGENIC
X	6277622	X_6277622_SNP [dm3] X_6383589_SNP [dm6]	A	G	8.825e^-5	0.763	UPSTREAM CG33664 INTERGENIC
3R	4931102	3R_4931102_SNP [dm3] 3R_9105380_SNP [dm6]	A	C	8.831e^-5	0.763	INTRON pum
3R	10192460	3R_10192460_SNP [dm3] 3R_14366738_SNP [dm6]	G	A	8.836e^-5	0.763	INTRON NK7.1	TF binding site BDTNP1_TFBS_twi
2L	9445549	2L_9445549_SNP [dm3] 2L_9445549_SNP [dm6]	T	A	8.954e^-5	0.763	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
X	2477618	X_2477618_SNP [dm3] X_2583585_SNP [dm6]	C	G	8.961e^-5	0.763	SYNONYMOUS_CODING CG13759 DOWNSTREAM CG13760	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	9146522	2R_9146522_SNP [dm3] 2R_13259017_SNP [dm6]	C	G	8.988e^-5	0.763	DOWNSTREAM CG10799 INTERGENIC
2R	6037966	2R_6037966_SNP [dm3] 2R_10150461_SNP [dm6]	G	A	8.990e^-5	0.763	INTRON KCNQ
3L	9949025	3L_9949025_SNP [dm3] 3L_9955925_SNP [dm6]	G	T	9.146e^-5	0.763	INTRON CG34356
3L	4174670	3L_4174670_SNP [dm3] 3L_4174670_SNP [dm6]	G	C	9.392e^-5	0.763	SPLICE_SITE_REGION CG18675 DOWNSTREAM Ero1L & 1 other INTRON CG18675
X	8418184	X_8418184_SNP [dm3] X_8524151_SNP [dm6]	T	A	9.399e^-5	0.763	INTRON Nrg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17706304	3L_17706304_SNP [dm3] 3L_17713204_SNP [dm6]	T	C	9.406e^-5	0.763	INTRON Ccn
3R	23337364	3R_23337364_SNP [dm3] 3R_27511642_SNP [dm6]	C	G	9.448e^-5	0.763	INTERGENIC
2L	17620994	2L_17620994_SNP [dm3] 2L_17620994_SNP [dm6]	A	G	9.544e^-5	0.763	INTERGENIC	TF binding site mE1_TFBS_Trl
2L	18501185	2L_18501185_SNP [dm3] 2L_18501185_SNP [dm6]	A	C	9.561e^-5	0.763	UTR_5_PRIME kon UPSTREAM kon	TF binding site BDTNP1_TFBS_da
2R	14272034	2R_14272034_SNP [dm3] 2R_18384529_SNP [dm6]	T	A	9.595e^-5	0.763	UPSTREAM CG18107 DOWNSTREAM CG15067 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	13702736	2L_13702736_SNP [dm3] 2L_13702736_SNP [dm6]	C	T	9.737e^-5	0.763	INTRON CG31814
3L	10117118	3L_10117118_SNP [dm3] 3L_10124018_SNP [dm6]	T	C	9.790e^-5	0.763	INTRON dpr6
2L	8341531	2L_8341531_DEL [dm3] 2L_8341531_DEL [dm6]	AAAAA	T	9.837e^-5	0.763	UTR_3_PRIME CG14274
X	11627399	X_11627399_SNP [dm3] X_11733366_SNP [dm6]	T	A	9.918e^-5	0.763	UPSTREAM inaF-B INTRON CG15221 & 1 other
3R	9764146	3R_9764146_SNP [dm3] 3R_13938424_SNP [dm6]	C	T	9.924e^-5	0.763	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
3R	11598592	3R_11598592_SNP [dm3] 3R_15772870_SNP [dm6]	A	G	9.936e^-5	0.763	INTERGENIC
3L	6383442	3L_6383442_SNP [dm3] 3L_6390342_SNP [dm6]	T	C	9.963e^-5	0.763	INTERGENIC
X	10920126	X_10920126_SNP [dm3] X_11026093_SNP [dm6]	C	T	1.005e^-4	0.763	INTRON CG42339
3L	12858356	3L_12858356_SNP [dm3] 3L_12865256_SNP [dm6]	C	T	1.008e^-4	0.763	INTERGENIC
3R	21311871	3R_21311871_SNP [dm3] 3R_25486149_SNP [dm6]	C	T	1.017e^-4	0.763	UTR_3_PRIME Dhap-at DOWNSTREAM CG42488 & 1 other	TF binding site mE1_TFBS_cad
3L	7799054	3L_7799054_SNP [dm3] 3L_7805954_SNP [dm6]	A	G	1.019e^-4	0.763	INTRON CG32369	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
X	11627415	X_11627415_SNP [dm3] X_11733382_SNP [dm6]	C	T	1.025e^-4	0.763	UPSTREAM inaF-B INTRON CG15221 & 1 other
3R	25795598	3R_25795598_SNP [dm3] 3R_29969876_SNP [dm6]	C	G	1.027e^-4	0.763	UPSTREAM TkR99D INTERGENIC
2L	3269331	2L_3269331_SNP [dm3] 2L_3269331_SNP [dm6]	A	T	1.034e^-4	0.763	UPSTREAM CG3347 DOWNSTREAM CR44484 INTERGENIC
2L	17560184	2L_17560184_SNP [dm3] 2L_17560184_SNP [dm6]	T	A	1.040e^-4	0.763	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
3L	11902637	3L_11902637_SNP [dm3] 3L_11909537_SNP [dm6]	T	A	1.043e^-4	0.763	INTRON CG44837
3L	11675600	3L_11675600_SNP [dm3] 3L_11682500_SNP [dm6]	C	T	1.044e^-4	0.763	SYNONYMOUS_CODING TfIIEalpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	10724632	3L_10724632_SNP [dm3] 3L_10731532_SNP [dm6]	T	A	1.047e^-4	0.763	INTERGENIC
2R	9269138	2R_9269138_SNP [dm3] 2R_13381633_SNP [dm6]	T	C	1.048e^-4	0.763	INTERGENIC
3R	5798597	3R_5798597_SNP [dm3] 3R_9972875_SNP [dm6]	T	A	1.050e^-4	0.763	INTRON Glut4EF
3L	17706167	3L_17706167_SNP [dm3] 3L_17713067_SNP [dm6]	A	T	1.054e^-4	0.763	INTRON Ccn
3L	16721744	3L_16721744_SNP [dm3] 3L_16728644_SNP [dm6]	G	C	1.054e^-4	0.763	SYNONYMOUS_CODING Dbp73D UPSTREAM PGRP-SB1
3R	24194442	3R_24194442_SNP [dm3] 3R_28368720_SNP [dm6]	C	T	1.055e^-4	0.763	INTERGENIC
2R	11152816	2R_11152816_SNP [dm3] 2R_15265311_SNP [dm6]	C	T	1.058e^-4	0.763	SYNONYMOUS_CODING Trpm INTRON Trpm	TF binding site mE1_TFBS_cad
3L	8875006	3L_8875006_DEL [dm3] 3L_8881906_DEL [dm6]	CC	C	1.061e^-4	0.763	INTRON dally
3R	13673851	3R_13673851_SNP [dm3] 3R_17848129_SNP [dm6]	T	C	1.063e^-4	0.763	INTRON tinc
3R	25930070	3R_25930070_SNP [dm3] 3R_30104348_SNP [dm6]	T	C	1.065e^-4	0.763	NON_SYNONYMOUS_CODING sima START_GAINED sima UTR_5_PRIME sima INTRON sima
3L	6669203	3L_6669203_SNP [dm3] 3L_6676103_SNP [dm6]	T	C	1.068e^-4	0.763	INTERGENIC
2L	16293805	2L_16293805_SNP [dm3] 2L_16293805_SNP [dm6]	C	T	1.073e^-4	0.763	UPSTREAM CG13258 & 2 others INTERGENIC
2L	7484924	2L_7484924_SNP [dm3] 2L_7484924_SNP [dm6]	G	C	1.077e^-4	0.763	INTRON Ziz
3R	13528391	3R_13528391_SNP [dm3] 3R_17702669_SNP [dm6]	T	G	1.080e^-4	0.763	INTRON osa	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	11627405	X_11627405_SNP [dm3] X_11733372_SNP [dm6]	G	T	1.080e^-4	0.763	UPSTREAM inaF-B INTRON CG15221 & 1 other
2L	9551242	2L_9551242_SNP [dm3] 2L_9551242_SNP [dm6]	G	T	1.085e^-4	0.763	UPSTREAM jp INTRON jp
2L	7461999	2L_7461999_SNP [dm3] 2L_7461999_SNP [dm6]	T	G	1.095e^-4	0.763	NON_SYNONYMOUS_CODING Gr28b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	18163553	2R_18163553_SNP [dm3] 2R_22276048_SNP [dm6]	T	C	1.095e^-4	0.763	INTRON dve
2R	9145702	2R_9145702_SNP [dm3] 2R_13258197_SNP [dm6]	A	C	1.097e^-4	0.763	NON_SYNONYMOUS_CODING CG10799 DOWNSTREAM CG4716
2L	7459706	2L_7459706_SNP [dm3] 2L_7459706_SNP [dm6]	A	T	1.102e^-4	0.763	UPSTREAM Gr28b INTRON Gr28b
2L	9234502	2L_9234502_SNP [dm3] 2L_9234502_SNP [dm6]	G	A	1.107e^-4	0.763	NON_SYNONYMOUS_CODING tai	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3L	995871	3L_995871_SNP [dm3] 3L_995871_SNP [dm6]	C	G	1.109e^-4	0.763	DOWNSTREAM trio & 1 other INTERGENIC
3L	3369542	3L_3369542_SNP [dm3] 3L_3369542_SNP [dm6]	T	G	1.117e^-4	0.763	UPSTREAM Drs DOWNSTREAM YT521-B INTERGENIC	regulatory region REDfly_CRMs
3R	12961233	3R_12961233_SNP [dm3] 3R_17135511_SNP [dm6]	G	A	1.121e^-4	0.763	UPSTREAM CG5246 DOWNSTREAM CG31267 INTERGENIC
3R	16176619	3R_16176619_SNP [dm3] 3R_20350897_SNP [dm6]	T	G	1.129e^-4	0.763	INTERGENIC
3R	11596080	3R_11596080_SNP [dm3] 3R_15770358_SNP [dm6]	A	T	1.134e^-4	0.763	INTERGENIC
2L	9445552	2L_9445552_SNP [dm3] 2L_9445552_SNP [dm6]	A	C	1.135e^-4	0.763	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
2L	9445566	2L_9445566_SNP [dm3] 2L_9445566_SNP [dm6]	C	T	1.135e^-4	0.763	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
3L	9627306	3L_9627306_SNP [dm3] 3L_9634206_SNP [dm6]	C	A	1.141e^-4	0.763	INTRON fry
3R	25930705	3R_25930705_DEL [dm3] 3R_30104983_DEL [dm6]	ATGGCAACGTA...	A	1.149e^-4	0.763	INTRON sima
3R	17988930	3R_17988930_SNP [dm3] 3R_22163208_SNP [dm6]	C	G	1.150e^-4	0.763	INTRON SKIP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	2671537	2L_2671537_SNP [dm3] 2L_2671537_SNP [dm6]	A	G	1.152e^-4	0.763	SYNONYMOUS_CODING Gr23a INTRON Gr23a	TF binding site mE1_TFBS_sens
3L	11924175	3L_11924175_DEL [dm3] 3L_11931075_DEL [dm6]	TT	T	1.158e^-4	0.763	INTRON CG44837 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	9409008	3L_9409008_SNP [dm3] 3L_9415908_SNP [dm6]	A	G	1.161e^-4	0.763	UTR_3_PRIME CG3982 INTRON CG3967	TF binding site mE1_TFBS_cad
2R	11764104	2R_11764104_SNP [dm3] 2R_15876599_SNP [dm6]	G	T	1.162e^-4	0.763	INTRON sli	TF binding site BDTNP1_TFBS_da
3L	14569458	3L_14569458_SNP [dm3] 3L_14576358_SNP [dm6]	A	G	1.164e^-4	0.763	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	9151092	2R_9151092_SNP [dm3] 2R_13263587_SNP [dm6]	G	C	1.168e^-4	0.763	SYNONYMOUS_CODING CG42319 INTRON CG42319
3L	7798990	3L_7798990_SNP [dm3] 3L_7805890_SNP [dm6]	A	C	1.170e^-4	0.763	INTRON CG32369	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
X	5447236	X_5447236_SNP [dm3] X_5553203_SNP [dm6]	A	G	1.173e^-4	0.763	INTRON Vsx2	TF binding site BDTNP1_TFBS_dl
3R	10216408	3R_10216408_SNP [dm3] 3R_14390686_SNP [dm6]	C	A	1.176e^-4	0.763	DOWNSTREAM cv-c INTERGENIC
2L	2630464	2L_2630464_SNP [dm3] 2L_2630464_SNP [dm6]	T	C	1.178e^-4	0.763	INTERGENIC
3L	3277144	3L_3277144_SNP [dm3] 3L_3277144_SNP [dm6]	C	T	1.181e^-4	0.763	DOWNSTREAM CG14960 INTERGENIC	TF binding site mE1_TFBS_bab1
2R	9269171	2R_9269171_SNP [dm3] 2R_13381666_SNP [dm6]	A	T	1.182e^-4	0.763	INTERGENIC
3R	25919114	3R_25919114_SNP [dm3] 3R_30093392_SNP [dm6]	C	A	1.187e^-4	0.763	INTRON sima
X	8445284	X_8445284_SNP [dm3] X_8551251_SNP [dm6]	T	G	1.188e^-4	0.763	DOWNSTREAM Nrg INTRON Nrg	TF binding site mE1_TFBS_HSA
3R	14196704	3R_14196704_SNP [dm3] 3R_18370982_SNP [dm6]	C	T	1.191e^-4	0.763	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	15250918	3R_15250918_SNP [dm3] 3R_19425196_SNP [dm6]	T	A	1.192e^-4	0.763	UTR_5_PRIME CG3517 INTRON CG31221	TF binding site mE1_TFBS_cad
3L	14569437	3L_14569437_SNP [dm3] 3L_14576337_SNP [dm6]	A	G	1.195e^-4	0.763	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	15837789	3L_15837789_SNP [dm3] 3L_15844689_SNP [dm6]	T	C	1.204e^-4	0.763	UPSTREAM CG32150 INTERGENIC	TF binding site mE1_TFBS_HSA
3R	24205494	3R_24205494_SNP [dm3] 3R_28379772_SNP [dm6]	T	G	1.204e^-4	0.763	INTERGENIC
3L	16721057	3L_16721057_SNP [dm3] 3L_16727957_SNP [dm6]	A	C	1.208e^-4	0.763	NON_SYNONYMOUS_CODING PGRP-SB1 DOWNSTREAM PGRP-SB2 & 1 other	TF binding site mE1_TFBS_cad
X	4908359	X_4908359_SNP [dm3] X_5014326_SNP [dm6]	A	C	1.209e^-4	0.763	INTRON CR44833
2L	3646214	2L_3646214_SNP [dm3] 2L_3646214_SNP [dm6]	G	A	1.213e^-4	0.763	UPSTREAM for INTRON for
3L	14331994	3L_14331994_SNP [dm3] 3L_14338894_SNP [dm6]	T	A	1.217e^-4	0.763	INTRON fz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	8437018	X_8437018_INS [dm3] X_8542985_INS [dm6]	G	GCGCAGT	1.227e^-4	0.767	INTRON Nrg
3R	22197816	3R_22197816_SNP [dm3] 3R_26372094_SNP [dm6]	A	T	1.242e^-4	0.774	INTERGENIC
3R	5799837	3R_5799837_SNP [dm3] 3R_9974115_SNP [dm6]	T	G	1.265e^-4	0.785	INTRON Glut4EF
X	2697963	X_2697963_SNP [dm3] X_2803930_SNP [dm6]	G	T	1.268e^-4	0.785	INTRON kirre
3R	25920552	3R_25920552_SNP [dm3] 3R_30094830_SNP [dm6]	C	T	1.277e^-4	0.786	INTRON sima	TF binding site mE1_TFBS_inv
2L	20682224	2L_20682224_DEL [dm3] 2L_20682224_DEL [dm6]	ATATA	A	1.284e^-4	0.786	UPSTREAM CG2617 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	2317778	3L_2317778_SNP [dm3] 3L_2317778_SNP [dm6]	G	C	1.295e^-4	0.786	UPSTREAM CR45427 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	3236091	2L_3236091_SNP [dm3] 2L_3236091_SNP [dm6]	A	C	1.298e^-4	0.786	INTERGENIC
3L	6687823	3L_6687823_DEL [dm3] 3L_6694723_DEL [dm6]	TTGGGCTCAT	T	1.300e^-4	0.786	INTRON SP1173
3L	9409138	3L_9409138_SNP [dm3] 3L_9416038_SNP [dm6]	T	C	1.302e^-4	0.786	SYNONYMOUS_CODING CG3982 INTRON CG3967	TF binding site mE1_TFBS_cad
3R	12283262	3R_12283262_SNP [dm3] 3R_16457540_SNP [dm6]	T	C	1.304e^-4	0.786	SYNONYMOUS_CODING CG14883 DOWNSTREAM CG42232
2R	19918390	2R_19918390_SNP [dm3] 2R_24030867_SNP [dm6]	A	T	1.308e^-4	0.786	DOWNSTREAM Chi & 1 other INTRON CG30172
3L	14569238	3L_14569238_SNP [dm3] 3L_14576138_SNP [dm6]	T	G	1.308e^-4	0.786	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	13060871	3L_13060871_SNP [dm3] 3L_13067771_SNP [dm6]	G	A	1.324e^-4	0.788	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
3R	628853	3R_628853_DEL [dm3] 3R_4803131_DEL [dm6]	TATTCAACGGGAAAATTTCA...	T	1.325e^-4	0.788	UPSTREAM ctrip INTRON ctrip	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3L	23141225	3L_23141225_SNP [dm3] 3L_23148125_SNP [dm6]	C	T	1.331e^-4	0.788	NON_SYNONYMOUS_CODING CG32350
3L	5774228	3L_5774228_SNP [dm3] 3L_5781128_SNP [dm6]	C	T	1.332e^-4	0.788	START_GAINED PGRP-LD UTR_5_PRIME PGRP-LD UTR_3_PRIME Pmi UPSTREAM PGRP-LD & 1 other INTRON PGRP-LD & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	3530559	2L_3530559_SNP [dm3] 2L_3530559_SNP [dm6]	T	A	1.333e^-4	0.788	UPSTREAM Che-13 & 1 other INTERGENIC	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_zfh1
3L	1738266	3L_1738266_SNP [dm3] 3L_1738266_SNP [dm6]	A	T	1.338e^-4	0.788	UPSTREAM Gk & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_hb
3L	12794878	3L_12794878_SNP [dm3] 3L_12801778_SNP [dm6]	G	C	1.350e^-4	0.788	INTRON Atg1	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	24205346	3R_24205346_SNP [dm3] 3R_28379624_SNP [dm6]	A	T	1.350e^-4	0.788	INTERGENIC
X	5144430	X_5144430_INS [dm3] X_5250397_INS [dm6]	T	TG	1.351e^-4	0.788	INTRON CG15465 & 1 other
2L	2398989	2L_2398989_SNP [dm3] 2L_2398989_SNP [dm6]	G	A	1.359e^-4	0.788	INTRON VGlut
3L	7799050	3L_7799050_SNP [dm3] 3L_7805950_SNP [dm6]	G	C	1.370e^-4	0.788	INTRON CG32369	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
X	8957546	X_8957546_SNP [dm3] X_9063513_SNP [dm6]	A	T	1.371e^-4	0.788	INTRON CG15365
3L	8699375	3L_8699375_SNP [dm3] 3L_8706275_SNP [dm6]	C	T	1.382e^-4	0.788	INTERGENIC	TF binding site mE1_TFBS_cad
3R	12957792	3R_12957792_SNP [dm3] 3R_17132070_SNP [dm6]	T	C	1.382e^-4	0.788	SYNONYMOUS_CODING CG4053 UPSTREAM CG31266	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
X	8466240	X_8466240_SNP [dm3] X_8572207_SNP [dm6]	G	A	1.383e^-4	0.788	SYNONYMOUS_CODING spirit	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3L	15889292	3L_15889292_SNP [dm3] 3L_15896192_SNP [dm6]	T	G	1.384e^-4	0.788	INTRON pHCl
2L	9447072	2L_9447072_SNP [dm3] 2L_9447072_SNP [dm6]	C	A	1.392e^-4	0.788	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_Trl
X	16155306	X_16155306_SNP [dm3] X_16261273_SNP [dm6]	T	C	1.400e^-4	0.788	INTERGENIC
3L	15837750	3L_15837750_SNP [dm3] 3L_15844650_SNP [dm6]	G	T	1.405e^-4	0.788	UPSTREAM CG32150 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	14954367	3L_14954367_SNP [dm3] 3L_14961267_SNP [dm6]	G	C	1.406e^-4	0.788	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	24300918	3L_24300918_SNP [dm3] 3L_24307818_SNP [dm6]	G	A	1.409e^-4	0.788	INTERGENIC
3L	7968774	3L_7968774_SNP [dm3] 3L_7975674_SNP [dm6]	A	T	1.411e^-4	0.788	NON_SYNONYMOUS_CODING HP4 UTR_3_PRIME HP4 UPSTREAM CG8042 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
X	13440131	X_13440131_SNP [dm3] X_13546098_SNP [dm6]	A	G	1.424e^-4	0.788	INTERGENIC
3L	9248812	3L_9248812_SNP [dm3] 3L_9255712_SNP [dm6]	A	G	1.428e^-4	0.788	INTRON GluRIB
2R	17721362	2R_17721362_SNP [dm3] 2R_21833857_SNP [dm6]	A	G	1.428e^-4	0.788	UPSTREAM CG34040 DOWNSTREAM CG4363 INTERGENIC
2R	15569340	2R_15569340_SNP [dm3] 2R_19681835_SNP [dm6]	A	C	1.430e^-4	0.788	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
3R	6072111	3R_6072111_SNP [dm3] 3R_10246389_SNP [dm6]	T	C	1.431e^-4	0.788	NON_SYNONYMOUS_CODING CG42795
3L	2643721	3L_2643721_SNP [dm3] 3L_2643721_SNP [dm6]	T	A	1.431e^-4	0.788	UPSTREAM CG14949 INTERGENIC
2R	15569439	2R_15569439_SNP [dm3] 2R_19681934_SNP [dm6]	A	G	1.435e^-4	0.788	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
X	8875030	X_8875030_SNP [dm3] X_8980997_SNP [dm6]	T	C	1.442e^-4	0.788	INTRON rdgA & 1 other
2L	7455935	2L_7455935_SNP [dm3] 2L_7455935_SNP [dm6]	A	G	1.444e^-4	0.788	SYNONYMOUS_CODING Gr28b INTRON Gr28b	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	9566619	3L_9566619_SNP [dm3] 3L_9573519_SNP [dm6]	G	T	1.446e^-4	0.788	INTRON CG42673
X	14265360	X_14265360_SNP [dm3] X_14371327_SNP [dm6]	G	A	1.466e^-4	0.797	INTRON dpr8
3L	8874976	3L_8874976_MNP [dm3] 3L_8881876_MNP [dm6]	CAT	TGA	1.474e^-4	0.797	INTRON dally
3L	8875004	3L_8875004_SNP [dm3] 3L_8881904_SNP [dm6]	T	C	1.474e^-4	0.797	INTRON dally
2R	9419457	2R_9419457_SNP [dm3] 2R_13531952_SNP [dm6]	C	T	1.487e^-4	0.798	INTRON Vmat
2L	7808830	2L_7808830_SNP [dm3] 2L_7808830_SNP [dm6]	A	G	1.492e^-4	0.798	INTRON cdc14	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	13806482	2L_13806482_SNP [dm3] 2L_13806482_SNP [dm6]	C	T	1.501e^-4	0.798	INTRON CAH1
3R	5881791	3R_5881791_SNP [dm3] 3R_10056069_SNP [dm6]	T	C	1.505e^-4	0.798	NON_SYNONYMOUS_CODING Npc2d
3L	3368510	3L_3368510_SNP [dm3] 3L_3368510_SNP [dm6]	C	T	1.507e^-4	0.798	DOWNSTREAM kst INTERGENIC
2R	15569407	2R_15569407_DEL [dm3] 2R_19681902_DEL [dm6]	ATTAAACTT	G	1.507e^-4	0.798	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
2R	15569417	2R_15569417_SNP [dm3] 2R_19681912_SNP [dm6]	G	A	1.507e^-4	0.798	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
X	11159805	X_11159805_SNP [dm3] X_11265772_SNP [dm6]	T	C	1.511e^-4	0.798	INTRON CG44422	TF binding site mE1_TFBS_inv
3R	14662759	3R_14662759_SNP [dm3] 3R_18837037_SNP [dm6]	G	A	1.520e^-4	0.798	INTRON CG18208
2R	9419460	2R_9419460_SNP [dm3] 2R_13531955_SNP [dm6]	G	A	1.549e^-4	0.798	INTRON Vmat
2L	14138128	2L_14138128_SNP [dm3] 2L_14138128_SNP [dm6]	T	C	1.554e^-4	0.798	INTRON CG17341	TF binding site mE1_TFBS_cad
2R	15143960	2R_15143960_SNP [dm3] 2R_19256455_SNP [dm6]	G	A	1.561e^-4	0.798	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA
3L	7799243	3L_7799243_SNP [dm3] 3L_7806143_SNP [dm6]	T	G	1.562e^-4	0.798	INTRON CG32369	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
2R	15569309	2R_15569309_SNP [dm3] 2R_19681804_SNP [dm6]	T	C	1.567e^-4	0.798	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
2R	7549434	2R_7549434_SNP [dm3] 2R_11661929_SNP [dm6]	T	G	1.569e^-4	0.798	INTRON Roc2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	11598605	3R_11598605_SNP [dm3] 3R_15772883_SNP [dm6]	T	A	1.573e^-4	0.798	INTERGENIC
3L	5899376	3L_5899376_SNP [dm3] 3L_5906276_SNP [dm6]	T	G	1.581e^-4	0.798	SYNONYMOUS_CODING CG10486
X	16009935	X_16009935_SNP [dm3] X_16115902_SNP [dm6]	G	A	1.592e^-4	0.798	INTERGENIC
2R	14303689	2R_14303689_SNP [dm3] 2R_18416184_SNP [dm6]	C	T	1.600e^-4	0.798	SYNONYMOUS_CODING Dp1	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	15569312	2R_15569312_SNP [dm3] 2R_19681807_SNP [dm6]	T	C	1.601e^-4	0.798	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
3L	4436036	3L_4436036_SNP [dm3] 3L_4436036_SNP [dm6]	C	T	1.608e^-4	0.798	UPSTREAM CG15021 DOWNSTREAM nAChRbeta1 INTERGENIC
3L	9252365	3L_9252365_SNP [dm3] 3L_9259265_SNP [dm6]	G	A	1.616e^-4	0.798	INTRON GluRIB	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	8925526	2R_8925526_SNP [dm3] 2R_13038021_SNP [dm6]	C	A	1.623e^-4	0.798	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	9445539	2L_9445539_SNP [dm3] 2L_9445539_SNP [dm6]	C	G	1.630e^-4	0.798	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	11598630	3R_11598630_SNP [dm3] 3R_15772908_SNP [dm6]	A	T	1.633e^-4	0.798	INTERGENIC
2L	7812811	2L_7812811_SNP [dm3] 2L_7812811_SNP [dm6]	A	T	1.636e^-4	0.798	INTRON LanB1	TF binding site BDTNP1_TFBS_twi
2L	7456653	2L_7456653_INS [dm3] 2L_7456653_INS [dm6]	T	TTAGATTGGCTT...	1.638e^-4	0.798	UPSTREAM Gr28b INTRON Gr28b	TF binding site mE1_TFBS_HSA
3L	6391561	3L_6391561_SNP [dm3] 3L_6398461_SNP [dm6]	C	A	1.639e^-4	0.798	INTERGENIC
3R	11452683	3R_11452683_SNP [dm3] 3R_15626961_SNP [dm6]	C	A	1.641e^-4	0.798	INTERGENIC
2R	7526499	2R_7526499_SNP [dm3] 2R_11638994_SNP [dm6]	C	T	1.643e^-4	0.798	INTRON CG9005	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	9882364	3R_9882364_SNP [dm3] 3R_14056642_SNP [dm6]	T	C	1.647e^-4	0.798	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	10699105	2L_10699105_SNP [dm3] 2L_10699105_SNP [dm6]	G	A	1.652e^-4	0.798	DOWNSTREAM CR44181 & 1 other INTERGENIC
3R	25929573	3R_25929573_SNP [dm3] 3R_30103851_SNP [dm6]	G	A	1.658e^-4	0.798	INTRON sima
3R	10880752	3R_10880752_INS [dm3] 3R_15055030_INS [dm6]	T	TT	1.660e^-4	0.798	UTR_3_PRIME dpr9
3R	24205454	3R_24205454_SNP [dm3] 3R_28379732_SNP [dm6]	C	T	1.662e^-4	0.798	INTERGENIC
3L	995303	3L_995303_SNP [dm3] 3L_995303_SNP [dm6]	C	T	1.662e^-4	0.798	SYNONYMOUS_CODING CG12038 DOWNSTREAM trio	TF binding site mE1_TFBS_cad
2L	7664189	2L_7664189_SNP [dm3] 2L_7664189_SNP [dm6]	G	A	1.665e^-4	0.798	INTRON Slob
3L	9824838	3L_9824838_SNP [dm3] 3L_9831738_SNP [dm6]	A	T	1.667e^-4	0.798	INTRON CG43897
3L	992195	3L_992195_SNP [dm3] 3L_992195_SNP [dm6]	A	G	1.668e^-4	0.798	UTR_3_PRIME Glut1 DOWNSTREAM Glut1
2R	15569323	2R_15569323_SNP [dm3] 2R_19681818_SNP [dm6]	C	A	1.668e^-4	0.798	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
2L	3411118	2L_3411118_SNP [dm3] 2L_3411118_SNP [dm6]	T	C	1.677e^-4	0.798	UTR_3_PRIME CG8840 INTRON pgant2
3R	14168715	3R_14168715_SNP [dm3] 3R_18342993_SNP [dm6]	T	C	1.679e^-4	0.798	INTRON CG15803
2L	9445625	2L_9445625_SNP [dm3] 2L_9445625_SNP [dm6]	C	T	1.680e^-4	0.798	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sbb
2R	6641256	2R_6641256_SNP [dm3] 2R_10753751_SNP [dm6]	A	C	1.681e^-4	0.798	INTRON CG33144
3L	15056822	3L_15056822_SNP [dm3] 3L_15063722_SNP [dm6]	A	C	1.684e^-4	0.798	INTRON Sytbeta
3L	11393813	3L_11393813_SNP [dm3] 3L_11400713_SNP [dm6]	T	C	1.690e^-4	0.798	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	3269315	2L_3269315_SNP [dm3] 2L_3269315_SNP [dm6]	C	T	1.691e^-4	0.798	UPSTREAM CG3347 DOWNSTREAM CR44484 INTERGENIC
3L	12851997	3L_12851997_SNP [dm3] 3L_12858897_SNP [dm6]	C	A	1.692e^-4	0.798	NON_SYNONYMOUS_CODING CG32107
3R	25919173	3R_25919173_SNP [dm3] 3R_30093451_SNP [dm6]	T	C	1.707e^-4	0.798	INTRON sima
2L	7812400	2L_7812400_SNP [dm3] 2L_7812400_SNP [dm6]	T	C	1.714e^-4	0.798	INTRON LanB1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	13113053	X_13113053_SNP [dm3] X_13219020_SNP [dm6]	G	T	1.719e^-4	0.798	INTRON mew
2R	18370650	2R_18370650_SNP [dm3] 2R_22483145_SNP [dm6]	T	G	1.724e^-4	0.798	UPSTREAM CG4554 DOWNSTREAM CG4752 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	14568570	3L_14568570_SNP [dm3] 3L_14575470_SNP [dm6]	C	T	1.726e^-4	0.798	INTERGENIC	regulatory region REDfly_CRMs
X	3142787	X_3142787_INS [dm3] X_3248754_INS [dm6]	G	GCTG	1.742e^-4	0.798	CODON_INSERTION Pig1 UPSTREAM Sgs4 INTRON dnc
X	11051264	X_11051264_SNP [dm3] X_11157231_SNP [dm6]	G	A	1.744e^-4	0.798	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_sens
3R	5362338	3R_5362338_SNP [dm3] 3R_9536616_SNP [dm6]	G	T	1.746e^-4	0.798	UTR_3_PRIME mura
3R	9764150	3R_9764150_SNP [dm3] 3R_13938428_SNP [dm6]	C	T	1.747e^-4	0.798	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
2R	19847592	2R_19847592_SNP [dm3] 2R_23960069_SNP [dm6]	G	A	1.748e^-4	0.798	NON_SYNONYMOUS_CODING alpha-catenin-related	TF binding site mE1_TFBS_chinmo
3R	11598585	3R_11598585_SNP [dm3] 3R_15772863_SNP [dm6]	A	T	1.753e^-4	0.798	INTERGENIC
3L	2392197	3L_2392197_SNP [dm3] 3L_2392197_SNP [dm6]	C	A	1.756e^-4	0.798	INTRON CG45186
3L	2318985	3L_2318985_SNP [dm3] 3L_2318985_SNP [dm6]	A	G	1.760e^-4	0.798	DOWNSTREAM CR45426 INTERGENIC
3L	10415838	3L_10415838_SNP [dm3] 3L_10422738_SNP [dm6]	A	G	1.764e^-4	0.798	INTERGENIC
X	21283478	X_21283478_SNP [dm3] X_21412451_SNP [dm6]	A	G	1.770e^-4	0.798	INTERGENIC
3R	11015110	3R_11015110_SNP [dm3] 3R_15189388_SNP [dm6]	C	A	1.776e^-4	0.798	NON_SYNONYMOUS_CODING Gyc88E	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	10617505	2R_10617505_DEL [dm3] 2R_14730000_DEL [dm6]	AGTCGGCTTCTA...	A	1.777e^-4	0.798	INTERGENIC
2R	7729053	2R_7729053_SNP [dm3] 2R_11841548_SNP [dm6]	A	T	1.781e^-4	0.798	UPSTREAM CG34229 DOWNSTREAM S2P INTERGENIC
2R	18372002	2R_18372002_SNP [dm3] 2R_22484497_SNP [dm6]	A	T	1.786e^-4	0.798	SYNONYMOUS_CODING CG4554	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	14767929	2L_14767929_INS [dm3] 2L_14767929_INS [dm6]	T	TTTAT	1.788e^-4	0.798	DOWNSTREAM CG4701 INTERGENIC
3L	7026807	3L_7026807_SNP [dm3] 3L_7033707_SNP [dm6]	G	A	1.792e^-4	0.798	INTRON Mp
3R	25528976	3R_25528976_SNP [dm3] 3R_29703254_SNP [dm6]	T	C	1.794e^-4	0.798	INTERGENIC
3R	10270462	3R_10270462_DEL [dm3] 3R_14444740_DEL [dm6]	CT	C	1.795e^-4	0.798	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	9777329	3L_9777329_SNP [dm3] 3L_9784229_SNP [dm6]	T	G	1.798e^-4	0.798	SYNONYMOUS_CODING CG8177	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	2392244	3L_2392244_SNP [dm3] 3L_2392244_SNP [dm6]	A	C	1.803e^-4	0.798	INTRON CG45186
2R	6058187	2R_6058187_SNP [dm3] 2R_10170682_SNP [dm6]	G	T	1.803e^-4	0.798	INTRON KCNQ
2L	7567254	2L_7567254_INS [dm3] 2L_7567254_INS [dm6]	A	AT	1.805e^-4	0.798	INTRON RapGAP1
2L	3322271	2L_3322271_SNP [dm3] 2L_3322271_SNP [dm6]	A	T	1.808e^-4	0.798	INTRON CG8837	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	2731210	X_2731210_SNP [dm3] X_2837177_SNP [dm6]	G	T	1.813e^-4	0.798	INTRON kirre
2R	15569322	2R_15569322_SNP [dm3] 2R_19681817_SNP [dm6]	C	A	1.814e^-4	0.798	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
2R	12637185	2R_12637185_SNP [dm3] 2R_16749680_SNP [dm6]	G	A	1.814e^-4	0.798	UPSTREAM Acp53C14b DOWNSTREAM Acp53Ea INTERGENIC
2L	11313522	2L_11313522_SNP [dm3] 2L_11313522_SNP [dm6]	T	C	1.826e^-4	0.799	INTERGENIC
3R	22279197	3R_22279197_DEL [dm3] 3R_26453475_DEL [dm6]	AGTGATCGT	A	1.839e^-4	0.799	INTRON CG5447
X	17156647	X_17156647_SNP [dm3] X_17262614_SNP [dm6]	A	T	1.848e^-4	0.799	UPSTREAM f INTRON f	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	11723243	2R_11723243_SNP [dm3] 2R_15835738_SNP [dm6]	T	A	1.850e^-4	0.799	UPSTREAM Poxn INTRON tun	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Trl
2L	3322277	2L_3322277_SNP [dm3] 2L_3322277_SNP [dm6]	G	A	1.850e^-4	0.799	INTRON CG8837	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	25522770	3R_25522770_SNP [dm3] 3R_29697048_SNP [dm6]	G	T	1.858e^-4	0.799	DOWNSTREAM dmrt99B INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	5822064	3R_5822064_SNP [dm3] 3R_9996342_SNP [dm6]	T	A	1.862e^-4	0.799	NON_SYNONYMOUS_CODING Gr85a UPSTREAM Spn85F DOWNSTREAM Glut4EF	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	15811723	X_15811723_SNP [dm3] X_15917690_SNP [dm6]	A	T	1.867e^-4	0.799	SYNONYMOUS_CODING CG8909	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	9108813	3L_9108813_SNP [dm3] 3L_9115713_SNP [dm6]	G	A	1.874e^-4	0.799	INTRON bol
2R	10956583	2R_10956583_SNP [dm3] 2R_15069078_SNP [dm6]	G	C	1.876e^-4	0.799	INTERGENIC
2L	9157681	2L_9157681_SNP [dm3] 2L_9157681_SNP [dm6]	A	G	1.885e^-4	0.799	INTRON CG32982	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	23477229	3R_23477229_SNP [dm3] 3R_27651507_SNP [dm6]	T	G	1.901e^-4	0.799	UTR_3_PRIME tau UPSTREAM tau INTRON tau
2R	15797275	2R_15797275_SNP [dm3] 2R_19909770_SNP [dm6]	C	G	1.904e^-4	0.799	DOWNSTREAM CR44573 INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	5688780	3L_5688780_SNP [dm3] 3L_5695680_SNP [dm6]	G	T	1.905e^-4	0.799	UTR_5_PRIME sif INTRON sif	TF binding site mE1_TFBS_chinmo
3L	9574353	3L_9574353_SNP [dm3] 3L_9581253_SNP [dm6]	G	T	1.908e^-4	0.799	INTRON CG42673
3L	9408807	3L_9408807_SNP [dm3] 3L_9415707_SNP [dm6]	G	A	1.910e^-4	0.799	DOWNSTREAM CG3982 INTRON CG3967
X	3921932	X_3921932_SNP [dm3] X_4027899_SNP [dm6]	G	T	1.928e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	15477355	3L_15477355_SNP [dm3] 3L_15484255_SNP [dm6]	C	A	1.931e^-4	0.799	DOWNSTREAM Ran-like INTERGENIC
3L	16512129	3L_16512129_SNP [dm3] 3L_16519029_SNP [dm6]	T	C	1.935e^-4	0.799	INTRON CG43373
3L	10690739	3L_10690739_SNP [dm3] 3L_10697639_SNP [dm6]	T	A	1.937e^-4	0.799	UPSTREAM NijA INTERGENIC
3R	11598617	3R_11598617_SNP [dm3] 3R_15772895_SNP [dm6]	A	T	1.954e^-4	0.799	INTERGENIC
2L	7455948	2L_7455948_SNP [dm3] 2L_7455948_SNP [dm6]	G	A	1.962e^-4	0.799	NON_SYNONYMOUS_CODING Gr28b INTRON Gr28b	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	5853531	3R_5853531_SNP [dm3] 3R_10027809_SNP [dm6]	G	C	1.964e^-4	0.799	INTRON Mical
3R	22615468	3R_22615468_SNP [dm3] 3R_26789746_SNP [dm6]	A	C	1.965e^-4	0.799	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_twi
2L	2430940	2L_2430940_SNP [dm3] 2L_2430940_SNP [dm6]	T	C	1.968e^-4	0.799	INTRON dpp
3L	7330450	3L_7330450_SNP [dm3] 3L_7337350_SNP [dm6]	G	A	1.968e^-4	0.799	SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	14460614	3R_14460614_INS [dm3] 3R_18634892_INS [dm6]	A	AA	1.974e^-4	0.799	INTRON qin & 1 other
3L	14569108	3L_14569108_SNP [dm3] 3L_14576008_SNP [dm6]	C	A	1.978e^-4	0.799	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da
3L	3538043	3L_3538043_SNP [dm3] 3L_3538043_SNP [dm6]	C	T	1.985e^-4	0.799	INTRON Eip63E
3L	6384647	3L_6384647_SNP [dm3] 3L_6391547_SNP [dm6]	G	T	2.000e^-4	0.799	INTERGENIC
2R	14383296	2R_14383296_SNP [dm3] 2R_18495791_SNP [dm6]	A	C	2.001e^-4	0.799	INTRON CG30116
3L	10093553	3L_10093553_SNP [dm3] 3L_10100453_SNP [dm6]	G	C	2.004e^-4	0.799	NON_SYNONYMOUS_CODING CG42826 INTRON dpr6
2R	7549768	2R_7549768_SNP [dm3] 2R_11662263_SNP [dm6]	A	G	2.017e^-4	0.799	INTRON Roc2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	1310321	2L_1310321_SNP [dm3] 2L_1310321_SNP [dm6]	T	G	2.017e^-4	0.799	INTERGENIC
3R	17618700	3R_17618700_SNP [dm3] 3R_21792978_SNP [dm6]	T	A	2.021e^-4	0.799	INTRON CASK	TF binding site mE1_TFBS_cad
2R	11144147	2R_11144147_SNP [dm3] 2R_15256642_SNP [dm6]	G	A	2.025e^-4	0.799	INTRON scb	TF binding site mE1_TFBS_cad
3L	10092919	3L_10092919_SNP [dm3] 3L_10099819_SNP [dm6]	C	T	2.036e^-4	0.799	SYNONYMOUS_CODING CG42826 INTRON dpr6
3R	9884122	3R_9884122_SNP [dm3] 3R_14058400_SNP [dm6]	A	C	2.044e^-4	0.799	INTRON foxo
3L	11452718	3L_11452718_SNP [dm3] 3L_11459618_SNP [dm6]	G	T	2.051e^-4	0.799	UTR_3_PRIME CG7551	TF binding site mE1_TFBS_inv
2R	14762141	2R_14762141_SNP [dm3] 2R_18874636_SNP [dm6]	G	C	2.055e^-4	0.799	INTERGENIC
3R	14196642	3R_14196642_SNP [dm3] 3R_18370920_SNP [dm6]	A	G	2.056e^-4	0.799	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
X	15970356	X_15970356_SNP [dm3] X_16076323_SNP [dm6]	C	T	2.057e^-4	0.799	UTR_3_PRIME Tob	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
3R	12035476	3R_12035476_SNP [dm3] 3R_16209754_SNP [dm6]	G	T	2.069e^-4	0.799	UPSTREAM CR45639 & 1 other DOWNSTREAM CR45640 EXON CR45637
X	7908805	X_7908805_SNP [dm3] X_8014772_SNP [dm6]	C	A	2.075e^-4	0.799	INTRON Tbh
2L	6147546	2L_6147546_SNP [dm3] 2L_6147546_SNP [dm6]	C	T	2.081e^-4	0.799	INTERGENIC
3L	4177766	3L_4177766_SNP [dm3] 3L_4177766_SNP [dm6]	G	A	2.082e^-4	0.799	UTR_5_PRIME Teh4 INTRON CG18675	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	19478797	2L_19478797_SNP [dm3] 2L_19478797_SNP [dm6]	A	T	2.084e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
3R	22446117	3R_22446117_SNP [dm3] 3R_26620395_SNP [dm6]	C	A	2.090e^-4	0.799	DOWNSTREAM TwdlP & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	2393411	3L_2393411_SNP [dm3] 3L_2393411_SNP [dm6]	G	A	2.091e^-4	0.799	INTRON CG45186	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	4635622	2L_4635622_SNP [dm3] 2L_4635622_SNP [dm6]	T	A	2.093e^-4	0.799	INTERGENIC
2R	13466902	2R_13466902_SNP [dm3] 2R_17579397_SNP [dm6]	C	A	2.096e^-4	0.799	INTRON Dcr-2	TF binding site BDTNP1_TFBS_prd
2R	17116081	2R_17116081_SNP [dm3] 2R_21228576_SNP [dm6]	G	A	2.106e^-4	0.799	INTRON ASPP
2R	7806659	2R_7806659_SNP [dm3] 2R_11919154_SNP [dm6]	A	T	2.106e^-4	0.799	DOWNSTREAM CR44305 INTERGENIC
3L	24253898	3L_24253898_SNP [dm3] 3L_24260798_SNP [dm6]	G	A	2.107e^-4	0.799	INTRON Snap25
3R	9542553	3R_9542553_SNP [dm3] 3R_13716831_SNP [dm6]	G	T	2.108e^-4	0.799	DOWNSTREAM CG9602 INTRON CG34383	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad
3R	14196623	3R_14196623_SNP [dm3] 3R_18370901_SNP [dm6]	A	G	2.112e^-4	0.799	INTRON gl	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	995867	3L_995867_SNP [dm3] 3L_995867_SNP [dm6]	G	A	2.113e^-4	0.799	DOWNSTREAM trio & 1 other INTERGENIC
3L	958731	3L_958731_SNP [dm3] 3L_958731_SNP [dm6]	C	A	2.117e^-4	0.799	UPSTREAM Glut1 INTRON Glut1	TF binding site mE1_TFBS_Trl
2L	19478799	2L_19478799_SNP [dm3] 2L_19478799_SNP [dm6]	G	C	2.119e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
2R	16211890	2R_16211890_SNP [dm3] 2R_20324385_SNP [dm6]	C	A	2.121e^-4	0.799	SYNONYMOUS_CODING CG8920
2L	4346911	2L_4346911_SNP [dm3] 2L_4346911_SNP [dm6]	A	C	2.126e^-4	0.799	UPSTREAM CR44697 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	6297005	2R_6297005_SNP [dm3] 2R_10409500_SNP [dm6]	T	G	2.129e^-4	0.799	SYNONYMOUS_CODING CG33477 UPSTREAM CG43177 DOWNSTREAM CG33476 INTRON CG42732
2L	2261719	2L_2261719_SNP [dm3] 2L_2261719_SNP [dm6]	A	T	2.134e^-4	0.799	INTERGENIC
2L	2261738	2L_2261738_SNP [dm3] 2L_2261738_SNP [dm6]	T	A	2.134e^-4	0.799	INTERGENIC
2L	2261740	2L_2261740_SNP [dm3] 2L_2261740_SNP [dm6]	G	A	2.134e^-4	0.799	INTERGENIC
2L	2261743	2L_2261743_DEL [dm3] 2L_2261743_DEL [dm6]	ATTGTTTGGCTTCAAATTCA...	A	2.134e^-4	0.799	INTERGENIC
2R	12653896	2R_12653896_SNP [dm3] 2R_16766391_SNP [dm6]	C	T	2.135e^-4	0.799	UPSTREAM CG5348 & 2 others INTRON unc-104
2R	14340005	2R_14340005_SNP [dm3] 2R_18452500_SNP [dm6]	A	G	2.146e^-4	0.799	SYNONYMOUS_CODING CG5190 DOWNSTREAM CG17669	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	11246384	X_11246384_SNP [dm3] X_11352351_SNP [dm6]	A	T	2.147e^-4	0.799	SYNONYMOUS_CODING CG1737	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	17608507	2L_17608507_SNP [dm3] 2L_17608507_SNP [dm6]	C	T	2.149e^-4	0.799	INTERGENIC
3L	15898098	3L_15898098_SNP [dm3] 3L_15904998_SNP [dm6]	G	A	2.150e^-4	0.799	INTRON sff
3L	5305311	3L_5305311_SNP [dm3] 3L_5312211_SNP [dm6]	G	C	2.151e^-4	0.799	INTERGENIC
2L	16177192	2L_16177192_SNP [dm3] 2L_16177192_SNP [dm6]	T	C	2.151e^-4	0.799	SYNONYMOUS_CODING Ca-alpha1D
X	8875046	X_8875046_SNP [dm3] X_8981013_SNP [dm6]	A	T	2.153e^-4	0.799	INTRON rdgA & 1 other
3R	24205215	3R_24205215_SNP [dm3] 3R_28379493_SNP [dm6]	T	A	2.156e^-4	0.799	INTERGENIC
3R	25006674	3R_25006674_SNP [dm3] 3R_29180952_SNP [dm6]	A	G	2.158e^-4	0.799	INTRON CG14509
3L	8633767	3L_8633767_SNP [dm3] 3L_8640667_SNP [dm6]	G	A	2.164e^-4	0.799	SYNONYMOUS_CODING Cpr66D
3L	10694966	3L_10694966_SNP [dm3] 3L_10701866_SNP [dm6]	C	A	2.177e^-4	0.799	INTERGENIC
3L	16343226	3L_16343226_SNP [dm3] 3L_16350126_SNP [dm6]	C	T	2.178e^-4	0.799	NON_SYNONYMOUS_CODING CG4925 DOWNSTREAM tRNA:CR32357
2L	6229416	2L_6229416_SNP [dm3] 2L_6229416_SNP [dm6]	T	C	2.179e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA
3R	24205532	3R_24205532_SNP [dm3] 3R_28379810_SNP [dm6]	T	G	2.188e^-4	0.799	INTERGENIC
2R	9798910	2R_9798910_SNP [dm3] 2R_13911405_SNP [dm6]	C	A	2.192e^-4	0.799	UPSTREAM shot INTRON shot	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	11598628	3R_11598628_SNP [dm3] 3R_15772906_SNP [dm6]	T	A	2.193e^-4	0.799	INTERGENIC
3L	8634366	3L_8634366_INS [dm3] 3L_8641266_INS [dm6]	A	AA	2.197e^-4	0.799	INTRON Cpr66D
3R	11598597	3R_11598597_SNP [dm3] 3R_15772875_SNP [dm6]	C	T	2.220e^-4	0.799	INTERGENIC
3L	18952059	3L_18952059_DEL [dm3] 3L_18958959_DEL [dm6]	GA	G	2.231e^-4	0.799	INTERGENIC
3L	14372390	3L_14372390_SNP [dm3] 3L_14379290_SNP [dm6]	T	A	2.234e^-4	0.799	INTERGENIC
3L	5868206	3L_5868206_SNP [dm3] 3L_5875106_SNP [dm6]	C	A	2.238e^-4	0.799	SYNONYMOUS_CODING CG18586
2L	9445495	2L_9445495_SNP [dm3] 2L_9445495_SNP [dm6]	T	C	2.238e^-4	0.799	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	17644064	2L_17644064_SNP [dm3] 2L_17644064_SNP [dm6]	T	A	2.243e^-4	0.799	DOWNSTREAM CR45699 INTERGENIC
3R	10216370	3R_10216370_SNP [dm3] 3R_14390648_SNP [dm6]	A	G	2.247e^-4	0.799	INTERGENIC
3R	25918808	3R_25918808_SNP [dm3] 3R_30093086_SNP [dm6]	T	C	2.250e^-4	0.799	INTRON sima
3R	24228602	3R_24228602_SNP [dm3] 3R_28402880_SNP [dm6]	T	C	2.256e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_inv
2R	10956560	2R_10956560_INS [dm3] 2R_15069055_INS [dm6]	A	AA	2.265e^-4	0.799	INTERGENIC
3L	11393816	3L_11393816_DEL [dm3] 3L_11400716_DEL [dm6]	CCA	C	2.271e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	11393821	3L_11393821_DEL [dm3] 3L_11400721_DEL [dm6]	TCAC	T	2.271e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	11598640	3R_11598640_SNP [dm3] 3R_15772918_SNP [dm6]	A	G	2.272e^-4	0.799	INTERGENIC
3L	14994761	3L_14994761_SNP [dm3] 3L_15001661_SNP [dm6]	G	T	2.282e^-4	0.799	UTR_3_PRIME Reck DOWNSTREAM Prosbeta2
X	10066204	X_10066204_SNP [dm3] X_10172171_SNP [dm6]	T	G	2.286e^-4	0.799	INTRON CG43902 & 1 other
2R	18370728	2R_18370728_SNP [dm3] 2R_22483223_SNP [dm6]	G	A	2.296e^-4	0.799	UPSTREAM CG4554 DOWNSTREAM CG4752 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	7452798	2L_7452798_SNP [dm3] 2L_7452798_SNP [dm6]	C	T	2.297e^-4	0.799	SYNONYMOUS_CODING Gr28a	TF binding site mE1_TFBS_HSA
2R	10956567	2R_10956567_SNP [dm3] 2R_15069062_SNP [dm6]	T	G	2.307e^-4	0.799	INTERGENIC
3L	18205263	3L_18205263_SNP [dm3] 3L_18212163_SNP [dm6]	C	T	2.311e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_cnc
3R	9882392	3R_9882392_INS [dm3] 3R_14056670_INS [dm6]	T	TGT	2.332e^-4	0.799	UPSTREAM foxo INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	18574885	3R_18574885_SNP [dm3] 3R_22749163_SNP [dm6]	G	A	2.335e^-4	0.799	UTR_3_PRIME rumi UPSTREAM CG31139
3R	22198421	3R_22198421_SNP [dm3] 3R_26372699_SNP [dm6]	A	T	2.336e^-4	0.799	INTERGENIC
X	771004	X_771004_SNP [dm3] X_876971_SNP [dm6]	T	A	2.340e^-4	0.799	DOWNSTREAM CG11664 INTRON CG43867
3R	17379085	3R_17379085_SNP [dm3] 3R_21553363_SNP [dm6]	A	G	2.348e^-4	0.799	INTRON slou
X	19014109	X_19014109_SNP [dm3] X_19120076_SNP [dm6]	T	G	2.349e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_inv
3R	10766223	3R_10766223_SNP [dm3] 3R_14940501_SNP [dm6]	C	A	2.353e^-4	0.799	INTERGENIC
3R	25393565	3R_25393565_SNP [dm3] 3R_29567843_SNP [dm6]	C	A	2.354e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_cad
3R	4899851	3R_4899851_SNP [dm3] 3R_9074129_SNP [dm6]	G	A	2.355e^-4	0.799	INTRON pum
3L	9248790	3L_9248790_SNP [dm3] 3L_9255690_SNP [dm6]	T	A	2.356e^-4	0.799	INTRON GluRIB
X	2698889	X_2698889_SNP [dm3] X_2804856_SNP [dm6]	G	T	2.356e^-4	0.799	INTRON kirre	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	16448543	3L_16448543_SNP [dm3] 3L_16455443_SNP [dm6]	C	A	2.364e^-4	0.799	INTRON CG33158	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2261729	2L_2261729_SNP [dm3] 2L_2261729_SNP [dm6]	T	G	2.367e^-4	0.799	INTERGENIC
2L	10137758	2L_10137758_SNP [dm3] 2L_10137758_SNP [dm6]	T	A	2.367e^-4	0.799	INTRON CG44153
2L	4346464	2L_4346464_SNP [dm3] 2L_4346464_SNP [dm6]	C	G	2.368e^-4	0.799	DOWNSTREAM Atet INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	6868664	2R_6868664_DEL [dm3] 2R_10981159_DEL [dm6]	TACTG	T	2.371e^-4	0.799	UTR_3_PRIME luna
3L	18446458	3L_18446458_SNP [dm3] 3L_18453358_SNP [dm6]	C	G	2.386e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	1484967	3L_1484967_SNP [dm3] 3L_1484967_SNP [dm6]	T	C	2.387e^-4	0.799	INTRON stet	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
3L	5774645	3L_5774645_SNP [dm3] 3L_5781545_SNP [dm6]	T	A	2.392e^-4	0.799	SPLICE_SITE_REGION PGRP-LD & 1 other UTR_5_PRIME PGRP-LD UTR_3_PRIME Pmi UPSTREAM CR45026 INTRON PGRP-LD & 1 other
2R	12665740	2R_12665740_SNP [dm3] 2R_16778235_SNP [dm6]	A	G	2.393e^-4	0.799	UPSTREAM Vkor INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	2140306	3L_2140306_SNP [dm3] 3L_2140306_SNP [dm6]	C	T	2.394e^-4	0.799	SYNONYMOUS_CODING zormin	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	4564948	X_4564948_SNP [dm3] X_4670915_SNP [dm6]	A	C	2.398e^-4	0.799	INTRON rap
2L	10931938	2L_10931938_SNP [dm3] 2L_10931938_SNP [dm6]	T	C	2.399e^-4	0.799	INTRON dpr2
3R	11543653	3R_11543653_SNP [dm3] 3R_15717931_SNP [dm6]	G	C	2.401e^-4	0.799	INTERGENIC
3L	13192935	3L_13192935_SNP [dm3] 3L_13199835_SNP [dm6]	C	T	2.410e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	11452722	3L_11452722_SNP [dm3] 3L_11459622_SNP [dm6]	T	C	2.417e^-4	0.799	UTR_3_PRIME CG7551	TF binding site mE1_TFBS_inv
3R	25918811	3R_25918811_DEL [dm3] 3R_30093089_DEL [dm6]	CA	C	2.417e^-4	0.799	INTRON sima
2R	10204038	2R_10204038_SNP [dm3] 2R_14316533_SNP [dm6]	A	C	2.422e^-4	0.799	INTRON Shroom
3R	18746416	3R_18746416_SNP [dm3] 3R_22920694_SNP [dm6]	G	A	2.428e^-4	0.799	INTRON klg
3L	9715958	3L_9715958_SNP [dm3] 3L_9722858_SNP [dm6]	A	G	2.432e^-4	0.799	SYNONYMOUS_CODING nbs UPSTREAM defl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2R	17116102	2R_17116102_SNP [dm3] 2R_21228597_SNP [dm6]	A	G	2.441e^-4	0.799	INTRON ASPP
3R	16915135	3R_16915135_SNP [dm3] 3R_21089413_SNP [dm6]	C	T	2.445e^-4	0.799	INTRON RhoGAP93B & 1 other
3L	17896352	3L_17896352_SNP [dm3] 3L_17903252_SNP [dm6]	T	A	2.450e^-4	0.799	INTRON Prestin
2L	6148076	2L_6148076_SNP [dm3] 2L_6148076_SNP [dm6]	A	C	2.453e^-4	0.799	INTERGENIC
3L	11452752	3L_11452752_SNP [dm3] 3L_11459652_SNP [dm6]	A	T	2.470e^-4	0.799	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
3L	1370069	3L_1370069_SNP [dm3] 3L_1370069_SNP [dm6]	T	A	2.473e^-4	0.799	UPSTREAM ru INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
3L	8646468	3L_8646468_SNP [dm3] 3L_8653368_SNP [dm6]	C	T	2.473e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	24508193	3R_24508193_SNP [dm3] 3R_28682471_SNP [dm6]	C	T	2.478e^-4	0.799	UTR_5_PRIME CG9990 INTRON CG9990	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z
X	13773008	X_13773008_SNP [dm3] X_13878975_SNP [dm6]	G	T	2.485e^-4	0.799	INTRON mamo
3L	6687841	3L_6687841_SNP [dm3] 3L_6694741_SNP [dm6]	T	G	2.507e^-4	0.799	INTRON SP1173
3R	27232146	3R_27232146_SNP [dm3] 3R_31406424_SNP [dm6]	T	A	2.510e^-4	0.799	UPSTREAM CG11337 INTRON Gprk2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_Trl
2R	19027591	2R_19027591_SNP [dm3] 2R_23140068_SNP [dm6]	T	C	2.518e^-4	0.799	SYNONYMOUS_CODING CG13544 DOWNSTREAM CG30192	TF binding site BDTNP1_TFBS_sna
3L	11452749	3L_11452749_INS [dm3] 3L_11459649_INS [dm6]	A	AA	2.524e^-4	0.799	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
X	5290043	X_5290043_SNP [dm3] X_5396010_SNP [dm6]	T	C	2.531e^-4	0.799	INTRON SK
3L	20088088	3L_20088088_SNP [dm3] 3L_20094988_SNP [dm6]	C	A	2.531e^-4	0.799	INTERGENIC
2L	6335458	2L_6335458_SNP [dm3] 2L_6335458_SNP [dm6]	C	G	2.536e^-4	0.799	SYNONYMOUS_CODING Pez	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	15884210	3L_15884210_SNP [dm3] 3L_15891110_SNP [dm6]	T	G	2.536e^-4	0.799	INTRON pHCl
3R	14455070	3R_14455070_INS [dm3] 3R_18629348_INS [dm6]	A	AGA	2.538e^-4	0.799	UTR_3_PRIME CG14301 UPSTREAM tRNA:CR31228 INTRON qin
2R	18370282	2R_18370282_SNP [dm3] 2R_22482777_SNP [dm6]	G	A	2.544e^-4	0.799	NON_SYNONYMOUS_CODING CG4752 UPSTREAM CG4554	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	18370803	2R_18370803_SNP [dm3] 2R_22483298_SNP [dm6]	C	T	2.544e^-4	0.799	UPSTREAM CG4554 DOWNSTREAM CG4752 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	18370808	2R_18370808_SNP [dm3] 2R_22483303_SNP [dm6]	G	A	2.544e^-4	0.799	UTR_5_PRIME CG4554 DOWNSTREAM CG4752	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	5147044	3L_5147044_SNP [dm3] 3L_5153944_SNP [dm6]	C	T	2.548e^-4	0.799	SYNONYMOUS_CODING Srp54k	TF binding site mE1_TFBS_sens
2L	8323686	2L_8323686_SNP [dm3] 2L_8323686_SNP [dm6]	C	T	2.551e^-4	0.799	INTRON CG7781
2R	11144103	2R_11144103_SNP [dm3] 2R_15256598_SNP [dm6]	G	A	2.551e^-4	0.799	SPLICE_SITE_REGION scb INTRON scb	TF binding site mE1_TFBS_cad
2R	11144108	2R_11144108_SNP [dm3] 2R_15256603_SNP [dm6]	G	T	2.551e^-4	0.799	SPLICE_SITE_REGION scb INTRON scb	TF binding site mE1_TFBS_cad
3R	15254317	3R_15254317_DEL [dm3] 3R_19428595_DEL [dm6]	GAT	G	2.558e^-4	0.799	INTRON CG31221
3L	16137545	3L_16137545_SNP [dm3] 3L_16144445_SNP [dm6]	A	C	2.558e^-4	0.799	UPSTREAM CG5151 & 1 other INTRON CG5151
2R	4685722	2R_4685722_SNP [dm3] 2R_8798217_SNP [dm6]	G	A	2.561e^-4	0.799	UPSTREAM sns INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3L	7800181	3L_7800181_SNP [dm3] 3L_7807081_SNP [dm6]	G	C	2.567e^-4	0.799	INTRON CG32369	TF binding site mE1_TFBS_sens
2R	12388918	2R_12388918_SNP [dm3] 2R_16501413_SNP [dm6]	T	C	2.567e^-4	0.799	INTRON Sema-2a	TF binding site BDTNP1_TFBS_twi
3R	11598622	3R_11598622_SNP [dm3] 3R_15772900_SNP [dm6]	C	T	2.569e^-4	0.799	INTERGENIC
2L	8258233	2L_8258233_SNP [dm3] 2L_8258233_SNP [dm6]	A	G	2.576e^-4	0.799	UPSTREAM CG8086 DOWNSTREAM Btk29A & 1 other INTERGENIC	insulator Insulator_Class_II.mE01
2L	8258238	2L_8258238_SNP [dm3] 2L_8258238_SNP [dm6]	T	A	2.576e^-4	0.799	UPSTREAM CG8086 DOWNSTREAM Btk29A & 1 other INTERGENIC	insulator Insulator_Class_II.mE01
3R	5802465	3R_5802465_SNP [dm3] 3R_9976743_SNP [dm6]	G	C	2.579e^-4	0.799	INTRON Glut4EF
3L	11452792	3L_11452792_DEL [dm3] 3L_11459692_DEL [dm6]	GGCACAAAG	G	2.581e^-4	0.799	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
2L	7814071	2L_7814071_SNP [dm3] 2L_7814071_SNP [dm6]	T	C	2.589e^-4	0.799	UPSTREAM LanB1 INTRON LanB1
3L	450468	3L_450468_SNP [dm3] 3L_450468_SNP [dm6]	G	T	2.591e^-4	0.799	INTRON klar
2R	17745867	2R_17745867_SNP [dm3] 2R_21858362_SNP [dm6]	C	G	2.594e^-4	0.799	INTERGENIC
3L	6394458	3L_6394458_SNP [dm3] 3L_6401358_SNP [dm6]	A	T	2.597e^-4	0.799	INTRON CG42747	TF binding site BDTNP1_TFBS_z mE1_TFBS_sens
3L	5771288	3L_5771288_SNP [dm3] 3L_5778188_SNP [dm6]	A	G	2.602e^-4	0.799	SYNONYMOUS_CODING Myt1 UPSTREAM vito
3R	26420743	3R_26420743_SNP [dm3] 3R_30595021_SNP [dm6]	T	A	2.604e^-4	0.799	INTRON CG2246
2R	16175402	2R_16175402_SNP [dm3] 2R_20287897_SNP [dm6]	C	T	2.610e^-4	0.799	NON_SYNONYMOUS_CODING CG34199 UPSTREAM CG16868 DOWNSTREAM Cpr56F
3R	10766469	3R_10766469_SNP [dm3] 3R_14940747_SNP [dm6]	A	T	2.616e^-4	0.799	INTERGENIC
2R	16924311	2R_16924311_SNP [dm3] 2R_21036806_SNP [dm6]	G	T	2.629e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10415518	3L_10415518_SNP [dm3] 3L_10422418_SNP [dm6]	T	C	2.629e^-4	0.799	INTERGENIC
3L	16723767	3L_16723767_SNP [dm3] 3L_16730667_SNP [dm6]	A	T	2.636e^-4	0.799	INTRON Dbp73D	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	9948936	3L_9948936_SNP [dm3] 3L_9955836_SNP [dm6]	C	T	2.638e^-4	0.799	INTRON CG34356
3L	10899159	3L_10899159_DEL [dm3] 3L_10906059_DEL [dm6]	AA	G	2.639e^-4	0.799	INTERGENIC
3R	2307512	3R_2307512_SNP [dm3] 3R_6481790_SNP [dm6]	T	C	2.640e^-4	0.799	UPSTREAM CG15186 INTRON CG15186
3L	4174699	3L_4174699_SNP [dm3] 3L_4174699_SNP [dm6]	T	C	2.640e^-4	0.799	DOWNSTREAM Ero1L & 1 other INTRON CG18675
2L	7472163	2L_7472163_SNP [dm3] 2L_7472163_SNP [dm6]	G	A	2.642e^-4	0.799	SYNONYMOUS_CODING CG6055 DOWNSTREAM Ziz
3L	9948924	3L_9948924_SNP [dm3] 3L_9955824_SNP [dm6]	C	T	2.643e^-4	0.799	INTRON CG34356
3L	8636075	3L_8636075_DEL [dm3] 3L_8642975_DEL [dm6]	TTACTCAT	T	2.643e^-4	0.799	INTRON Cpr66D	TF binding site mE1_TFBS_cad mE1_TFBS_inv
3L	9626596	3L_9626596_SNP [dm3] 3L_9633496_SNP [dm6]	C	T	2.647e^-4	0.799	SYNONYMOUS_CODING fry	TF binding site mE1_TFBS_cad
3R	26420746	3R_26420746_SNP [dm3] 3R_30595024_SNP [dm6]	T	A	2.653e^-4	0.799	INTRON CG2246
3L	6577186	3L_6577186_SNP [dm3] 3L_6584086_SNP [dm6]	A	T	2.655e^-4	0.799	INTRON CG18769 & 1 other	TF binding site mE1_TFBS_inv
2R	7806609	2R_7806609_SNP [dm3] 2R_11919104_SNP [dm6]	T	A	2.659e^-4	0.799	DOWNSTREAM CR44305 INTERGENIC
3L	11452759	3L_11452759_SNP [dm3] 3L_11459659_SNP [dm6]	C	T	2.666e^-4	0.799	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
2L	14159090	2L_14159090_SNP [dm3] 2L_14159090_SNP [dm6]	G	A	2.681e^-4	0.799	UTR_3_PRIME CG17341
2L	8609026	2L_8609026_SNP [dm3] 2L_8609026_SNP [dm6]	T	G	2.695e^-4	0.799	INTRON Sema-1a
3L	5756891	3L_5756891_SNP [dm3] 3L_5763791_SNP [dm6]	A	G	2.696e^-4	0.799	UPSTREAM snoRNA:Psi18S-1397 & 1 other DOWNSTREAM snoRNA:Psi28S-1837c & 2 others INTRON CG10576	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	11339275	3L_11339275_SNP [dm3] 3L_11346175_SNP [dm6]	A	G	2.697e^-4	0.799	INTERGENIC
X	5189953	X_5189953_SNP [dm3] X_5295920_SNP [dm6]	T	A	2.698e^-4	0.799	UPSTREAM CG42749 INTERGENIC
3L	8667656	3L_8667656_SNP [dm3] 3L_8674556_SNP [dm6]	A	T	2.704e^-4	0.799	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3L	8888646	3L_8888646_SNP [dm3] 3L_8895546_SNP [dm6]	G	A	2.707e^-4	0.799	SPLICE_SITE_REGION TrpA1 INTRON TrpA1
X	15269693	X_15269693_SNP [dm3] X_15375660_SNP [dm6]	T	C	2.713e^-4	0.799	INTRON acj6
X	18645418	X_18645418_SNP [dm3] X_18751385_SNP [dm6]	T	A	2.715e^-4	0.799	INTERGENIC
3R	24205719	3R_24205719_SNP [dm3] 3R_28379997_SNP [dm6]	G	A	2.720e^-4	0.799	INTERGENIC
3L	8645756	3L_8645756_SNP [dm3] 3L_8652656_SNP [dm6]	G	A	2.732e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2L	882129	2L_882129_SNP [dm3] 2L_882129_SNP [dm6]	T	A	2.749e^-4	0.799	SYNONYMOUS_CODING CG15824	TF binding site mE1_TFBS_cad
3L	10200074	3L_10200074_SNP [dm3] 3L_10206974_SNP [dm6]	C	G	2.759e^-4	0.799	DOWNSTREAM CR44538 INTERGENIC
2L	8150892	2L_8150892_SNP [dm3] 2L_8150892_SNP [dm6]	C	A	2.764e^-4	0.799	INTRON CG8552 & 1 other
2L	17608438	2L_17608438_SNP [dm3] 2L_17608438_SNP [dm6]	A	T	2.770e^-4	0.799	INTERGENIC
2L	3269345	2L_3269345_SNP [dm3] 2L_3269345_SNP [dm6]	T	C	2.770e^-4	0.799	UPSTREAM CG3347 DOWNSTREAM CR44484 INTERGENIC
2R	14278357	2R_14278357_DEL [dm3] 2R_18390852_DEL [dm6]	TTATTCGAT	T	2.777e^-4	0.799	UPSTREAM CG15068 DOWNSTREAM CG15065 INTERGENIC
2R	9190138	2R_9190138_SNP [dm3] 2R_13302633_SNP [dm6]	T	C	2.780e^-4	0.799	INTERGENIC
3R	5802792	3R_5802792_SNP [dm3] 3R_9977070_SNP [dm6]	G	T	2.781e^-4	0.799	INTRON Glut4EF
3R	9766072	3R_9766072_SNP [dm3] 3R_13940350_SNP [dm6]	C	T	2.792e^-4	0.799	INTERGENIC
2R	14192641	2R_14192641_SNP [dm3] 2R_18305136_SNP [dm6]	C	T	2.795e^-4	0.799	INTRON sbb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
3R	7011984	3R_7011984_SNP [dm3] 3R_11186262_SNP [dm6]	T	A	2.795e^-4	0.799	INTERGENIC
3L	11452598	3L_11452598_SNP [dm3] 3L_11459498_SNP [dm6]	C	T	2.799e^-4	0.799	SYNONYMOUS_CODING CG7551	TF binding site mE1_TFBS_inv
2L	14164457	2L_14164457_SNP [dm3] 2L_14164457_SNP [dm6]	T	C	2.803e^-4	0.799	SYNONYMOUS_CODING CG43333
3L	9654840	3L_9654840_SNP [dm3] 3L_9661740_SNP [dm6]	A	G	2.805e^-4	0.799	INTRON fry	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	6323061	X_6323061_DEL [dm3] X_6429028_DEL [dm6]	AAA	G	2.808e^-4	0.799	INTRON CG42340
3L	10110677	3L_10110677_INS [dm3] 3L_10117577_INS [dm6]	G	GT	2.812e^-4	0.799	INTRON dpr6
3L	4700971	3L_4700971_SNP [dm3] 3L_4700971_SNP [dm6]	C	A	2.820e^-4	0.799	INTRON RhoGEF64C
X	2184217	X_2184217_SNP [dm3] X_2290184_SNP [dm6]	A	G	2.823e^-4	0.799	INTRON CG2865	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	13689804	3L_13689804_SNP [dm3] 3L_13696704_SNP [dm6]	T	A	2.830e^-4	0.799	INTRON bru-3
X	2874521	X_2874521_DEL [dm3] X_2980488_DEL [dm6]	TTTA	T	2.833e^-4	0.799	INTRON kirre	regulatory region REDfly_CRMs
3R	21361247	3R_21361247_SNP [dm3] 3R_25535525_SNP [dm6]	A	T	2.833e^-4	0.799	INTRON msi
3L	995138	3L_995138_SNP [dm3] 3L_995138_SNP [dm6]	C	T	2.834e^-4	0.799	SYNONYMOUS_CODING CG12038 DOWNSTREAM trio	TF binding site mE1_TFBS_cad
2L	7458649	2L_7458649_SNP [dm3] 2L_7458649_SNP [dm6]	C	A	2.839e^-4	0.799	NON_SYNONYMOUS_CODING Gr28b INTRON Gr28b
3R	15432992	3R_15432992_SNP [dm3] 3R_19607270_SNP [dm6]	T	C	2.844e^-4	0.799	UTR_5_PRIME CG17751 DOWNSTREAM CG7342
3R	15363310	3R_15363310_SNP [dm3] 3R_19537588_SNP [dm6]	G	A	2.852e^-4	0.799	INTRON Dys
2R	14303713	2R_14303713_SNP [dm3] 2R_18416208_SNP [dm6]	G	C	2.857e^-4	0.799	SYNONYMOUS_CODING Dp1	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	9151059	2R_9151059_SNP [dm3] 2R_13263554_SNP [dm6]	T	C	2.862e^-4	0.799	SYNONYMOUS_CODING CG42319 INTRON CG42319
3L	11452726	3L_11452726_SNP [dm3] 3L_11459626_SNP [dm6]	A	T	2.864e^-4	0.799	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
X	4547630	X_4547630_SNP [dm3] X_4653597_SNP [dm6]	T	G	2.868e^-4	0.799	NON_SYNONYMOUS_CODING CG15473 INTRON Cbp80	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9381726	3L_9381726_SNP [dm3] 3L_9388626_SNP [dm6]	A	G	2.873e^-4	0.799	SYNONYMOUS_CODING CG4080	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	10699099	2L_10699099_SNP [dm3] 2L_10699099_SNP [dm6]	A	G	2.876e^-4	0.799	DOWNSTREAM CR44181 & 1 other INTERGENIC
3L	6828135	3L_6828135_SNP [dm3] 3L_6835035_SNP [dm6]	C	A	2.878e^-4	0.799	INTERGENIC
3L	7329397	3L_7329397_SNP [dm3] 3L_7336297_SNP [dm6]	C	T	2.879e^-4	0.799	SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	15889351	3L_15889351_SNP [dm3] 3L_15896251_SNP [dm6]	T	G	2.882e^-4	0.799	INTRON pHCl
3L	970792	3L_970792_SNP [dm3] 3L_970792_SNP [dm6]	G	A	2.882e^-4	0.799	INTRON Glut1
3L	2247177	3L_2247177_SNP [dm3] 3L_2247177_SNP [dm6]	T	C	2.892e^-4	0.799	SYNONYMOUS_CODING CG32301 UTR_3_PRIME CG32301	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	17156658	X_17156658_INS [dm3] X_17262625_INS [dm6]	C	CC	2.895e^-4	0.799	UPSTREAM f INTRON f	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	11452758	3L_11452758_SNP [dm3] 3L_11459658_SNP [dm6]	A	C	2.895e^-4	0.799	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
2L	7493513	2L_7493513_SNP [dm3] 2L_7493513_SNP [dm6]	G	A	2.895e^-4	0.799	INTRON Ziz
X	10110446	X_10110446_SNP [dm3] X_10216413_SNP [dm6]	T	G	2.895e^-4	0.799	UTR_3_PRIME l_1_G0230 INTRON CG2962
2L	3939669	2L_3939669_SNP [dm3] 2L_3939669_SNP [dm6]	C	A	2.905e^-4	0.799	INTRON fred
3R	21032611	3R_21032611_SNP [dm3] 3R_25206889_SNP [dm6]	G	T	2.906e^-4	0.799	INTRON CG13654 & 1 other
3L	16720890	3L_16720890_SNP [dm3] 3L_16727790_SNP [dm6]	A	T	2.924e^-4	0.799	SYNONYMOUS_CODING PGRP-SB1 DOWNSTREAM PGRP-SB2 & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	15736319	3R_15736319_SNP [dm3] 3R_19910597_SNP [dm6]	A	T	2.931e^-4	0.799	START_GAINED RhoGAP92B UTR_5_PRIME RhoGAP92B UPSTREAM CR45048 INTRON RhoGAP92B	TF binding site mE1_TFBS_HSA
2L	8258829	2L_8258829_SNP [dm3] 2L_8258829_SNP [dm6]	G	T	2.933e^-4	0.799	UTR_3_PRIME Btk29A UPSTREAM mir-2b-1 DOWNSTREAM Btk29A
2L	21898750	2L_21898750_SNP [dm3] 2L_21898750_SNP [dm6]	T	C	2.933e^-4	0.799	UPSTREAM CG11629 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_Trl
3R	15416677	3R_15416677_SNP [dm3] 3R_19590955_SNP [dm6]	C	T	2.938e^-4	0.799	SPLICE_SITE_REGION Dys INTRON Dys	TF binding site mE1_TFBS_cad
3L	11571673	3L_11571673_SNP [dm3] 3L_11578573_SNP [dm6]	T	C	2.941e^-4	0.799	UTR_5_PRIME CG33270
2L	7493493	2L_7493493_SNP [dm3] 2L_7493493_SNP [dm6]	T	C	2.943e^-4	0.799	INTRON Ziz
2L	9398460	2L_9398460_SNP [dm3] 2L_9398460_SNP [dm6]	G	A	2.945e^-4	0.799	UPSTREAM CG4438 INTRON Shawl
3L	589755	3L_589755_SNP [dm3] 3L_589755_SNP [dm6]	C	T	2.953e^-4	0.799	UPSTREAM Kah INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	16722053	3L_16722053_SNP [dm3] 3L_16728953_SNP [dm6]	A	G	2.954e^-4	0.799	SYNONYMOUS_CODING Dbp73D UPSTREAM PGRP-SB1	TF binding site mE1_TFBS_sens
2L	7493441	2L_7493441_DEL [dm3] 2L_7493441_DEL [dm6]	TTTGAAATATTTCCTA...	T	2.956e^-4	0.799	INTRON Ziz
3L	2232604	3L_2232604_SNP [dm3] 3L_2232604_SNP [dm6]	A	T	2.959e^-4	0.799	SYNONYMOUS_CODING Oseg2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	10849237	2L_10849237_SNP [dm3] 2L_10849237_SNP [dm6]	C	A	2.965e^-4	0.799	UPSTREAM porin & 1 other INTRON porin
3L	2487942	3L_2487942_SNP [dm3] 3L_2487942_SNP [dm6]	G	A	2.966e^-4	0.799	UPSTREAM CG1146 INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	15569646	2R_15569646_SNP [dm3] 2R_19682141_SNP [dm6]	C	G	2.978e^-4	0.799	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
X	10920150	X_10920150_SNP [dm3] X_11026117_SNP [dm6]	G	A	2.979e^-4	0.799	INTRON CG42339
3L	16279230	3L_16279230_INS [dm3] 3L_16286130_INS [dm6]	G	GTG	2.984e^-4	0.799	UPSTREAM CG13047 INTERGENIC
X	17154992	X_17154992_SNP [dm3] X_17260959_SNP [dm6]	A	G	2.988e^-4	0.799	INTRON f
3L	2643720	3L_2643720_SNP [dm3] 3L_2643720_SNP [dm6]	A	G	2.989e^-4	0.799	UPSTREAM CG14949 INTERGENIC
3L	6394845	3L_6394845_SNP [dm3] 3L_6401745_SNP [dm6]	C	A	2.992e^-4	0.799	INTRON CG42747	TF binding site BDTNP1_TFBS_z
2R	2903119	2R_2903119_INS [dm3] 2R_7015614_INS [dm6]	C	CTAA	2.997e^-4	0.799	INTRON Tsp42Ee	TF binding site BDTNP1_TFBS_twi
3R	15253011	3R_15253011_SNP [dm3] 3R_19427289_SNP [dm6]	G	T	3.000e^-4	0.799	INTRON CG31221
3L	8253674	3L_8253674_SNP [dm3] 3L_8260574_SNP [dm6]	T	G	3.000e^-4	0.799	INTRON Dscam4
2R	8925520	2R_8925520_INS [dm3] 2R_13038015_INS [dm6]	T	TT	3.002e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	3840120	2R_3840120_SNP [dm3] 2R_7952615_SNP [dm6]	T	C	3.004e^-4	0.799	INTRON CG14764
2R	10096818	2R_10096818_SNP [dm3] 2R_14209313_SNP [dm6]	T	C	3.005e^-4	0.799	INTRON Sox15	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl
X	14264736	X_14264736_SNP [dm3] X_14370703_SNP [dm6]	A	G	3.006e^-4	0.799	INTRON dpr8
3L	24220261	3L_24220261_SNP [dm3] 3L_24227161_SNP [dm6]	T	A	3.007e^-4	0.799	INTRON Snap25
X	6402668	X_6402668_SNP [dm3] X_6508635_SNP [dm6]	T	G	3.008e^-4	0.799	INTRON CG42340
3R	14057321	3R_14057321_SNP [dm3] 3R_18231599_SNP [dm6]	T	C	3.025e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	19311366	2L_19311366_SNP [dm3] 2L_19311366_SNP [dm6]	T	C	3.026e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_cad
3R	20703001	3R_20703001_SNP [dm3] 3R_24877279_SNP [dm6]	C	A	3.035e^-4	0.799	UTR_5_PRIME CG31381 UPSTREAM CG3744 INTRON CG11089	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
X	8466174	X_8466174_SNP [dm3] X_8572141_SNP [dm6]	A	C	3.040e^-4	0.799	SYNONYMOUS_CODING spirit	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
3L	4411246	3L_4411246_SNP [dm3] 3L_4411246_SNP [dm6]	G	T	3.042e^-4	0.799	INTRON DOR
X	11869377	X_11869377_SNP [dm3] X_11975344_SNP [dm6]	T	C	3.046e^-4	0.799	INTRON cac
3R	24204534	3R_24204534_SNP [dm3] 3R_28378812_SNP [dm6]	C	T	3.047e^-4	0.799	INTERGENIC
2R	12638757	2R_12638757_SNP [dm3] 2R_16751252_SNP [dm6]	G	A	3.050e^-4	0.799	UTR_5_PRIME Acp53C14c UPSTREAM Acp53Ea DOWNSTREAM unc-104
3L	14569281	3L_14569281_SNP [dm3] 3L_14576181_SNP [dm6]	C	G	3.051e^-4	0.799	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	10029994	2R_10029994_SNP [dm3] 2R_14142489_SNP [dm6]	T	A	3.053e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_ttk
3L	11452608	3L_11452608_SNP [dm3] 3L_11459508_SNP [dm6]	T	C	3.058e^-4	0.799	SYNONYMOUS_CODING CG7551	TF binding site mE1_TFBS_inv
3R	17619164	3R_17619164_SNP [dm3] 3R_21793442_SNP [dm6]	T	A	3.062e^-4	0.799	INTRON CASK	TF binding site mE1_TFBS_cad
3L	7330858	3L_7330858_SNP [dm3] 3L_7337758_SNP [dm6]	C	T	3.064e^-4	0.799	SYNONYMOUS_CODING eco	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	9382951	3L_9382951_SNP [dm3] 3L_9389851_SNP [dm6]	T	C	3.069e^-4	0.799	INTRON CG4080	TF binding site BDTNP1_TFBS_twi
3R	14196634	3R_14196634_SNP [dm3] 3R_18370912_SNP [dm6]	A	C	3.071e^-4	0.799	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
2R	18125998	2R_18125998_DEL [dm3] 2R_22238493_DEL [dm6]	GCTG	G	3.074e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	14895641	3L_14895641_SNP [dm3] 3L_14902541_SNP [dm6]	G	A	3.081e^-4	0.799	INTERGENIC
3L	14134571	3L_14134571_SNP [dm3] 3L_14141471_SNP [dm6]	G	T	3.082e^-4	0.799	INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
2R	11665562	2R_11665562_SNP [dm3] 2R_15778057_SNP [dm6]	T	A	3.083e^-4	0.799	INTRON Zasp52
3L	4751647	3L_4751647_SNP [dm3] 3L_4751647_SNP [dm6]	T	C	3.088e^-4	0.799	DOWNSTREAM CG12493 INTRON RhoGEF64C
3R	18813750	3R_18813750_SNP [dm3] 3R_22988028_SNP [dm6]	A	G	3.121e^-4	0.799	INTRON Nha2 & 1 other
3R	12035704	3R_12035704_SNP [dm3] 3R_16209982_SNP [dm6]	G	T	3.128e^-4	0.799	UPSTREAM CR45638 DOWNSTREAM CR45640 & 1 other INTERGENIC
3L	921902	3L_921902_SNP [dm3] 3L_921902_SNP [dm6]	T	C	3.130e^-4	0.799	INTRON Glut1
3R	24204967	3R_24204967_SNP [dm3] 3R_28379245_SNP [dm6]	G	C	3.130e^-4	0.799	INTERGENIC
2L	7493065	2L_7493065_SNP [dm3] 2L_7493065_SNP [dm6]	A	G	3.134e^-4	0.799	INTRON Ziz
3R	9638406	3R_9638406_SNP [dm3] 3R_13812684_SNP [dm6]	C	T	3.134e^-4	0.799	UPSTREAM tal-AA & 3 others INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	2952157	3L_2952157_SNP [dm3] 3L_2952157_SNP [dm6]	A	T	3.148e^-4	0.799	UPSTREAM CG32846 INTRON Shab	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
2R	10957853	2R_10957853_SNP [dm3] 2R_15070348_SNP [dm6]	A	C	3.149e^-4	0.799	INTERGENIC
2L	2625892	2L_2625892_SNP [dm3] 2L_2625892_SNP [dm6]	C	T	3.149e^-4	0.799	EXON CR45705
3L	11452731	3L_11452731_SNP [dm3] 3L_11459631_SNP [dm6]	A	G	3.151e^-4	0.799	DOWNSTREAM CG7551 INTERGENIC	TF binding site mE1_TFBS_inv
X	5290044	X_5290044_SNP [dm3] X_5396011_SNP [dm6]	G	A	3.152e^-4	0.799	INTRON SK
X	5290049	X_5290049_SNP [dm3] X_5396016_SNP [dm6]	A	G	3.152e^-4	0.799	INTRON SK
X	14686693	X_14686693_SNP [dm3] X_14792660_SNP [dm6]	C	G	3.158e^-4	0.799	INTRON rut
2R	15569375	2R_15569375_SNP [dm3] 2R_19681870_SNP [dm6]	A	G	3.158e^-4	0.799	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
2R	6378225	2R_6378225_SNP [dm3] 2R_10490720_SNP [dm6]	C	G	3.162e^-4	0.799	SYNONYMOUS_CODING lola DOWNSTREAM lola INTRON lola	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
X	6279531	X_6279531_SNP [dm3] X_6385498_SNP [dm6]	C	A	3.164e^-4	0.799	DOWNSTREAM CG33664 INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	21330598	3R_21330598_SNP [dm3] 3R_25504876_SNP [dm6]	A	C	3.166e^-4	0.799	UPSTREAM CG5107 DOWNSTREAM CR45651 INTERGENIC	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	4377238	3L_4377238_SNP [dm3] 3L_4377238_SNP [dm6]	A	T	3.166e^-4	0.799	DOWNSTREAM CR44360 INTRON DopEcR
3L	10097946	3L_10097946_SNP [dm3] 3L_10104846_SNP [dm6]	G	T	3.175e^-4	0.799	INTRON dpr6
3L	9824836	3L_9824836_SNP [dm3] 3L_9831736_SNP [dm6]	T	G	3.177e^-4	0.799	INTRON CG43897
3L	22494511	3L_22494511_SNP [dm3] 3L_22501411_SNP [dm6]	G	T	3.184e^-4	0.799	UPSTREAM CG43312 INTERGENIC
3R	14196902	3R_14196902_SNP [dm3] 3R_18371180_SNP [dm6]	A	G	3.192e^-4	0.799	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	16054881	2L_16054881_SNP [dm3] 2L_16054881_SNP [dm6]	G	A	3.192e^-4	0.799	INTRON beat-Ia
3L	3263234	3L_3263234_SNP [dm3] 3L_3263234_SNP [dm6]	T	C	3.205e^-4	0.799	INTRON ckd
2L	16794374	2L_16794374_SNP [dm3] 2L_16794374_SNP [dm6]	A	G	3.207e^-4	0.799	NON_SYNONYMOUS_CODING Ugt36Ba DOWNSTREAM CG17928	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2R	7688455	2R_7688455_SNP [dm3] 2R_11800950_SNP [dm6]	C	T	3.210e^-4	0.799	INTRON ths	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	4377231	3L_4377231_SNP [dm3] 3L_4377231_SNP [dm6]	G	A	3.221e^-4	0.799	DOWNSTREAM CR44360 INTRON DopEcR
2R	15569305	2R_15569305_SNP [dm3] 2R_19681800_SNP [dm6]	C	T	3.233e^-4	0.799	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
3R	11598642	3R_11598642_SNP [dm3] 3R_15772920_SNP [dm6]	T	A	3.243e^-4	0.799	INTERGENIC
3R	14196633	3R_14196633_SNP [dm3] 3R_18370911_SNP [dm6]	G	A	3.244e^-4	0.799	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo
3L	5774224	3L_5774224_SNP [dm3] 3L_5781124_SNP [dm6]	C	T	3.245e^-4	0.799	START_GAINED PGRP-LD UTR_5_PRIME PGRP-LD UTR_3_PRIME Pmi UPSTREAM PGRP-LD & 1 other INTRON PGRP-LD & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	10130706	2R_10130706_SNP [dm3] 2R_14243201_SNP [dm6]	T	G	3.245e^-4	0.799	SYNONYMOUS_CODING CG8494 UPSTREAM CG8503	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad
3L	16668697	3L_16668697_SNP [dm3] 3L_16675597_SNP [dm6]	C	T	3.245e^-4	0.799	SPLICE_SITE_REGION CG13032 DOWNSTREAM Lasp INTRON CG13032	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	7493460	2L_7493460_DEL [dm3] 2L_7493460_DEL [dm6]	TTTTTCGACAGTTCGCAGC...	T	3.249e^-4	0.799	INTRON Ziz
3L	9944059	3L_9944059_SNP [dm3] 3L_9950959_SNP [dm6]	C	T	3.253e^-4	0.799	INTRON CG34356
2L	6146563	2L_6146563_SNP [dm3] 2L_6146563_SNP [dm6]	A	G	3.257e^-4	0.799	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
X	16825843	X_16825843_SNP [dm3] X_16931810_SNP [dm6]	A	T	3.265e^-4	0.799	INTRON CG4928
3L	14569271	3L_14569271_SNP [dm3] 3L_14576171_SNP [dm6]	T	G	3.267e^-4	0.799	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	17126933	X_17126933_SNP [dm3] X_17232900_SNP [dm6]	A	C	3.283e^-4	0.799	UPSTREAM f INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	10962109	2L_10962109_DEL [dm3] 2L_10962109_DEL [dm6]	ACCCA	A	3.283e^-4	0.799	INTRON dpr2
3L	11452719	3L_11452719_SNP [dm3] 3L_11459619_SNP [dm6]	G	C	3.283e^-4	0.799	UTR_3_PRIME CG7551	TF binding site mE1_TFBS_inv
2R	14910352	2R_14910352_SNP [dm3] 2R_19022847_SNP [dm6]	G	T	3.291e^-4	0.799	UTR_3_PRIME 5-HT1B DOWNSTREAM 5-HT1B
2R	19128632	2R_19128632_DEL [dm3] 2R_23241109_DEL [dm6]	CTTTGCGGC	C	3.293e^-4	0.799	INTERGENIC
3R	26420230	3R_26420230_SNP [dm3] 3R_30594508_SNP [dm6]	C	A	3.298e^-4	0.799	INTRON CG2246
3R	11269111	3R_11269111_SNP [dm3] 3R_15443389_SNP [dm6]	G	T	3.300e^-4	0.799	INTRON AdamTS-A	TF binding site mE1_TFBS_cad
2R	15569376	2R_15569376_SNP [dm3] 2R_19681871_SNP [dm6]	C	T	3.303e^-4	0.799	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
X	16198813	X_16198813_SNP [dm3] X_16304780_SNP [dm6]	C	T	3.306e^-4	0.799	SYNONYMOUS_CODING CG3679
3R	15340648	3R_15340648_SNP [dm3] 3R_19514926_SNP [dm6]	G	A	3.306e^-4	0.799	INTRON Dys
3R	15253241	3R_15253241_SNP [dm3] 3R_19427519_SNP [dm6]	C	T	3.317e^-4	0.799	INTRON CG31221
X	22140568	X_22140568_SNP [dm3] X_22738732_SNP [dm6]	G	A	3.318e^-4	0.799	INTRON CR44997	transposable element FlyBase
3L	12853447	3L_12853447_SNP [dm3] 3L_12860347_SNP [dm6]	G	A	3.318e^-4	0.799	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_sens
2R	6960668	2R_6960668_SNP [dm3] 2R_11073163_SNP [dm6]	C	T	3.329e^-4	0.799	INTRON luna	TF binding site mE1_TFBS_HSA
2R	15569129	2R_15569129_DEL [dm3] 2R_19681624_DEL [dm6]	CATTGGCTCA	C	3.334e^-4	0.799	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
3L	7533468	3L_7533468_SNP [dm3] 3L_7540368_SNP [dm6]	T	C	3.341e^-4	0.799	SYNONYMOUS_CODING CG32374 UPSTREAM CG16998 DOWNSTREAM lqf
2L	9445837	2L_9445837_SNP [dm3] 2L_9445837_SNP [dm6]	A	C	3.347e^-4	0.799	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_HSA
3R	15254315	3R_15254315_INS [dm3] 3R_19428593_INS [dm6]	G	GA	3.355e^-4	0.799	INTRON CG31221
2L	5501492	2L_5501492_DEL [dm3] 2L_5501492_DEL [dm6]	ATTTCGTGGGCAGCA...	A	3.357e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_cad
2L	5501508	2L_5501508_SNP [dm3] 2L_5501508_SNP [dm6]	A	G	3.357e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_cad
3L	16665789	3L_16665789_SNP [dm3] 3L_16672689_SNP [dm6]	A	T	3.358e^-4	0.799	INTRON zetaCOP
3L	2319051	3L_2319051_SNP [dm3] 3L_2319051_SNP [dm6]	G	A	3.359e^-4	0.799	DOWNSTREAM CR45426 INTERGENIC
2L	14141763	2L_14141763_SNP [dm3] 2L_14141763_SNP [dm6]	T	C	3.360e^-4	0.799	INTRON CG17341
2R	18913939	2R_18913939_SNP [dm3] 2R_23026416_SNP [dm6]	A	T	3.364e^-4	0.799	INTRON twi & 1 other
3R	15254280	3R_15254280_SNP [dm3] 3R_19428558_SNP [dm6]	A	T	3.365e^-4	0.799	INTRON CG31221
3R	25921931	3R_25921931_SNP [dm3] 3R_30096209_SNP [dm6]	T	A	3.369e^-4	0.799	INTRON sima
3L	18240799	3L_18240799_SNP [dm3] 3L_18247699_SNP [dm6]	C	T	3.373e^-4	0.799	INTERGENIC
3R	12978085	3R_12978085_SNP [dm3] 3R_17152363_SNP [dm6]	C	A	3.374e^-4	0.799	SYNONYMOUS_CODING CG5292 DOWNSTREAM CG5285 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	16432848	3L_16432848_SNP [dm3] 3L_16439748_SNP [dm6]	C	T	3.377e^-4	0.799	INTRON CG33158 & 1 other
2L	10082200	2L_10082200_SNP [dm3] 2L_10082200_SNP [dm6]	C	T	3.386e^-4	0.799	INTRON CG44153	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10847293	X_10847293_SNP [dm3] X_10953260_SNP [dm6]	T	A	3.388e^-4	0.799	UPSTREAM Rab9Fb & 1 other INTRON Myo10A
3R	6463606	3R_6463606_SNP [dm3] 3R_10637884_SNP [dm6]	T	C	3.390e^-4	0.799	INTRON hth
3R	10215078	3R_10215078_SNP [dm3] 3R_14389356_SNP [dm6]	G	A	3.403e^-4	0.799	INTERGENIC
2R	18599202	2R_18599202_SNP [dm3] 2R_22711697_SNP [dm6]	G	A	3.405e^-4	0.799	NON_SYNONYMOUS_CODING CG30275 UTR_3_PRIME CG30275
3L	5633904	3L_5633904_SNP [dm3] 3L_5640804_SNP [dm6]	C	T	3.406e^-4	0.799	INTRON Blimp-1
3R	24205244	3R_24205244_SNP [dm3] 3R_28379522_SNP [dm6]	C	A	3.411e^-4	0.799	INTERGENIC
X	2474864	X_2474864_SNP [dm3] X_2580831_SNP [dm6]	T	C	3.415e^-4	0.799	UPSTREAM CG13759 & 1 other INTERGENIC
2R	11732122	2R_11732122_SNP [dm3] 2R_15844617_SNP [dm6]	A	G	3.415e^-4	0.799	SYNONYMOUS_CODING CG8249 INTRON tun	TF binding site mE1_TFBS_sens
2L	10973384	2L_10973384_SNP [dm3] 2L_10973384_SNP [dm6]	G	C	3.416e^-4	0.799	UTR_3_PRIME CG16743 DOWNSTREAM abo & 1 other
2R	7107370	2R_7107370_SNP [dm3] 2R_11219865_SNP [dm6]	G	A	3.421e^-4	0.799	UPSTREAM Syx6 & 1 other INTRON Syx6	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3L	18950977	3L_18950977_SNP [dm3] 3L_18957877_SNP [dm6]	T	G	3.423e^-4	0.799	INTERGENIC
3L	18951010	3L_18951010_SNP [dm3] 3L_18957910_SNP [dm6]	G	A	3.423e^-4	0.799	INTERGENIC
2R	10376657	2R_10376657_SNP [dm3] 2R_14489152_SNP [dm6]	C	T	3.424e^-4	0.799	INTRON L
X	11869314	X_11869314_SNP [dm3] X_11975281_SNP [dm6]	A	G	3.424e^-4	0.799	INTRON cac
3R	16442765	3R_16442765_SNP [dm3] 3R_20617043_SNP [dm6]	G	A	3.428e^-4	0.799	UPSTREAM CG5466 & 1 other INTERGENIC
3L	16720348	3L_16720348_SNP [dm3] 3L_16727248_SNP [dm6]	A	T	3.433e^-4	0.799	UTR_3_PRIME PGRP-SB2 DOWNSTREAM PGRP-SB1	TF binding site mE1_TFBS_cad
2L	19873399	2L_19873399_SNP [dm3] 2L_19873399_SNP [dm6]	T	G	3.436e^-4	0.799	INTRON sick
2R	10205217	2R_10205217_SNP [dm3] 2R_14317712_SNP [dm6]	C	A	3.439e^-4	0.799	INTRON Shroom
3L	8612720	3L_8612720_SNP [dm3] 3L_8619620_SNP [dm6]	T	C	3.444e^-4	0.799	UPSTREAM S-Lap2 DOWNSTREAM S-Lap1 INTERGENIC
3L	22329941	3L_22329941_SNP [dm3] 3L_22336841_SNP [dm6]	T	C	3.446e^-4	0.799	INTRON Ten-m
2R	16020062	2R_16020062_SNP [dm3] 2R_20132557_SNP [dm6]	G	A	3.446e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	2474861	X_2474861_INS [dm3] X_2580828_INS [dm6]	A	ACGTG	3.448e^-4	0.799	UPSTREAM CG13759 & 1 other INTERGENIC
3L	9628742	3L_9628742_SNP [dm3] 3L_9635642_SNP [dm6]	A	C	3.462e^-4	0.799	INTRON fry
2L	11307489	2L_11307489_DEL [dm3] 2L_11307489_DEL [dm6]	ATGTGGTGA	A	3.466e^-4	0.799	UPSTREAM CR43721 INTERGENIC
3R	10708193	3R_10708193_SNP [dm3] 3R_14882471_SNP [dm6]	A	T	3.468e^-4	0.799	UTR_3_PRIME CG3631 DOWNSTREAM Rrp6
3L	4381380	3L_4381380_SNP [dm3] 3L_4381380_SNP [dm6]	T	C	3.471e^-4	0.799	UPSTREAM DopEcR INTRON CG32240
3R	22197766	3R_22197766_SNP [dm3] 3R_26372044_SNP [dm6]	G	T	3.477e^-4	0.799	INTERGENIC
3L	12607506	3L_12607506_SNP [dm3] 3L_12614406_SNP [dm6]	A	G	3.483e^-4	0.799	INTRON caup	TF binding site mE1_TFBS_Stat92E
3R	14196912	3R_14196912_SNP [dm3] 3R_18371190_SNP [dm6]	T	C	3.484e^-4	0.799	INTRON gl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	10369470	3R_10369470_SNP [dm3] 3R_14543748_SNP [dm6]	C	G	3.485e^-4	0.799	INTRON Pde6
3L	18205256	3L_18205256_SNP [dm3] 3L_18212156_SNP [dm6]	T	A	3.492e^-4	0.799	INTERGENIC	TF binding site mE1_TFBS_cnc
2L	9362077	2L_9362077_SNP [dm3] 2L_9362077_SNP [dm6]	T	A	3.497e^-4	0.799	INTERGENIC
3R	11598632	3R_11598632_SNP [dm3] 3R_15772910_SNP [dm6]	C	T	3.499e^-4	0.799	INTERGENIC
3R	6859385	3R_6859385_SNP [dm3] 3R_11033663_SNP [dm6]	T	G	3.507e^-4	0.799	INTRON CG34114
3L	12853483	3L_12853483_SNP [dm3] 3L_12860383_SNP [dm6]	A	G	3.512e^-4	0.799	SYNONYMOUS_CODING CG32107	TF binding site mE1_TFBS_sens
2L	7455711	2L_7455711_SNP [dm3] 2L_7455711_SNP [dm6]	C	A	3.514e^-4	0.799	SYNONYMOUS_CODING Gr28b	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	477529	3L_477529_SNP [dm3] 3L_477529_SNP [dm6]	A	G	3.517e^-4	0.799	INTRON klar
2R	7806620	2R_7806620_SNP [dm3] 2R_11919115_SNP [dm6]	T	G	3.520e^-4	0.799	DOWNSTREAM CR44305 INTERGENIC
3L	14994551	3L_14994551_SNP [dm3] 3L_15001451_SNP [dm6]	A	T	3.521e^-4	0.799	UTR_3_PRIME Reck DOWNSTREAM Prosbeta2
3L	22669164	3L_22669164_SNP [dm3] 3L_22676064_SNP [dm6]	T	A	3.531e^-4	0.801	INTRON CG14457
X	2874537	X_2874537_SNP [dm3] X_2980504_SNP [dm6]	C	A	3.550e^-4	0.803	INTRON kirre	regulatory region REDfly_CRMs
X	20740524	X_20740524_SNP [dm3] X_20869497_SNP [dm6]	T	G	3.558e^-4	0.803	UPSTREAM CG1314 INTRON shakB
2L	9447384	2L_9447384_SNP [dm3] 2L_9447384_SNP [dm6]	G	A	3.563e^-4	0.803	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_cad mE1_TFBS_sens mE1_TFBS_Trl
3L	4377232	3L_4377232_SNP [dm3] 3L_4377232_SNP [dm6]	C	A	3.565e^-4	0.803	DOWNSTREAM CR44360 INTRON DopEcR
2L	11740849	2L_11740849_SNP [dm3] 2L_11740849_SNP [dm6]	C	T	3.571e^-4	0.803	INTRON Vha100-5	TF binding site mE1_TFBS_cad
3R	10183714	3R_10183714_SNP [dm3] 3R_14357992_SNP [dm6]	C	T	3.571e^-4	0.803	DOWNSTREAM CG31320 INTRON NK7.1
2R	15569288	2R_15569288_SNP [dm3] 2R_19681783_SNP [dm6]	G	A	3.572e^-4	0.803	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC
X	2610450	X_2610450_SNP [dm3] X_2716417_SNP [dm6]	A	G	3.583e^-4	0.803	NON_SYNONYMOUS_CODING CG2694	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	6686496	3L_6686496_SNP [dm3] 3L_6693396_SNP [dm6]	C	T	3.586e^-4	0.803	UPSTREAM SP1173 INTRON SP1173
3L	11444591	3L_11444591_INS [dm3] 3L_11451491_INS [dm6]	A	AA	3.588e^-4	0.803	INTERGENIC
X	3427591	X_3427591_SNP [dm3] X_3533558_SNP [dm6]	G	A	3.589e^-4	0.803	INTRON CG32791
3R	11998893	3R_11998893_SNP [dm3] 3R_16173171_SNP [dm6]	A	G	3.610e^-4	0.805	INTRON CG8925	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	17608523	2L_17608523_SNP [dm3] 2L_17608523_SNP [dm6]	G	T	3.613e^-4	0.805	INTERGENIC
2L	9273635	2L_9273635_SNP [dm3] 2L_9273635_SNP [dm6]	T	G	3.619e^-4	0.805	INTRON Ggamma30A
2L	6146562	2L_6146562_SNP [dm3] 2L_6146562_SNP [dm6]	G	T	3.620e^-4	0.805	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
3R	21840084	3R_21840084_SNP [dm3] 3R_26014362_SNP [dm6]	C	T	3.620e^-4	0.805	UPSTREAM Kaz-m1 INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_prd
2R	7107185	2R_7107185_SNP [dm3] 2R_11219680_SNP [dm6]	A	T	3.621e^-4	0.805	UTR_5_PRIME Syx6 & 1 other UPSTREAM Syx6 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3R	26420742	3R_26420742_SNP [dm3] 3R_30595020_SNP [dm6]	T	A	3.630e^-4	0.806	INTRON CG2246
X	8466203	X_8466203_SNP [dm3] X_8572170_SNP [dm6]	T	G	3.648e^-4	0.807	SYNONYMOUS_CODING spirit	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
2R	17922521	2R_17922521_SNP [dm3] 2R_22035016_SNP [dm6]	T	C	3.654e^-4	0.807	SYNONYMOUS_CODING CG9308 INTRON CG34370
2L	8609059	2L_8609059_DEL [dm3] 2L_8609059_DEL [dm6]	TCTAGGTT	T	3.655e^-4	0.807	INTRON Sema-1a
2L	5518096	2L_5518096_SNP [dm3] 2L_5518096_SNP [dm6]	C	A	3.660e^-4	0.807	SYNONYMOUS_CODING CG14020 DOWNSTREAM CG7382	TF binding site BDTNP1_TFBS_sna
3L	5774065	3L_5774065_SNP [dm3] 3L_5780965_SNP [dm6]	C	T	3.660e^-4	0.807	SYNONYMOUS_CODING Pmi UTR_5_PRIME PGRP-LD UPSTREAM PGRP-LD & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	16721190	3L_16721190_SNP [dm3] 3L_16728090_SNP [dm6]	G	A	3.663e^-4	0.807	UPSTREAM PGRP-SB1 DOWNSTREAM PGRP-SB2 & 1 other INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
3L	16720208	3L_16720208_SNP [dm3] 3L_16727108_SNP [dm6]	C	T	3.668e^-4	0.807	NON_SYNONYMOUS_CODING PGRP-SB2 SYNONYMOUS_CODING PGRP-SB2 UPSTREAM CG13026 DOWNSTREAM PGRP-SB1
3R	12038586	3R_12038586_SNP [dm3] 3R_16212864_SNP [dm6]	G	A	3.678e^-4	0.807	UPSTREAM CR45642 INTERGENIC
2R	6297008	2R_6297008_SNP [dm3] 2R_10409503_SNP [dm6]	G	C	3.682e^-4	0.807	SYNONYMOUS_CODING CG33477 UPSTREAM CG43177 DOWNSTREAM CG33476 INTRON CG42732
2L	9857685	2L_9857685_DEL [dm3] 2L_9857685_DEL [dm6]	AA	A	3.687e^-4	0.807	INTRON nAChRalpha6
3L	9616708	3L_9616708_SNP [dm3] 3L_9623608_SNP [dm6]	C	T	3.688e^-4	0.807	UTR_3_PRIME LanB2 UPSTREAM CG3335
3L	14894908	3L_14894908_SNP [dm3] 3L_14901808_SNP [dm6]	A	C	3.689e^-4	0.807	INTERGENIC
3R	26409313	3R_26409313_SNP [dm3] 3R_30583591_SNP [dm6]	C	T	3.693e^-4	0.807	UTR_5_PRIME Rpt6R DOWNSTREAM CG9717	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2L	7454746	2L_7454746_SNP [dm3] 2L_7454746_SNP [dm6]	T	C	3.707e^-4	0.809	UPSTREAM Gr28a DOWNSTREAM Gr28b INTERGENIC
3L	4701154	3L_4701154_SNP [dm3] 3L_4701154_SNP [dm6]	C	A	3.711e^-4	0.809	INTRON RhoGEF64C
X	5385558	X_5385558_SNP [dm3] X_5491525_SNP [dm6]	T	C	3.737e^-4	0.813	INTRON SPR	TF binding site mE1_TFBS_chinmo
3L	14952909	3L_14952909_SNP [dm3] 3L_14959809_SNP [dm6]	A	G	3.737e^-4	0.813	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	2733673	3R_2733673_SNP [dm3] 3R_6907951_SNP [dm6]	G	C	3.741e^-4	0.813	UTR_3_PRIME Antp INTRON Antp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
3L	4377222	3L_4377222_SNP [dm3] 3L_4377222_SNP [dm6]	C	A	3.745e^-4	0.813	DOWNSTREAM CR44360 INTRON DopEcR
3L	953115	3L_953115_SNP [dm3] 3L_953115_SNP [dm6]	G	T	3.749e^-4	0.813	INTRON Glut1
3L	6391549	3L_6391549_SNP [dm3] 3L_6398449_SNP [dm6]	C	T	3.761e^-4	0.814	INTERGENIC
3L	2529099	3L_2529099_SNP [dm3] 3L_2529099_SNP [dm6]	G	A	3.764e^-4	0.814	INTRON Spn
3R	25888042	3R_25888042_INS [dm3] 3R_30062320_INS [dm6]	A	AA	3.767e^-4	0.814	UPSTREAM sima INTRON sima
2L	1057236	2L_1057236_SNP [dm3] 2L_1057236_SNP [dm6]	G	A	3.774e^-4	0.814	INTRON S	TF binding site mE1_TFBS_sens
3L	10216152	3L_10216152_SNP [dm3] 3L_10223052_SNP [dm6]	C	T	3.778e^-4	0.814	SYNONYMOUS_CODING scramb1 UTR_5_PRIME scramb1 INTRON scramb1
3L	16948762	3L_16948762_SNP [dm3] 3L_16955662_SNP [dm6]	T	C	3.780e^-4	0.814	UPSTREAM Nc73EF INTRON Nc73EF	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	7448522	3L_7448522_SNP [dm3] 3L_7455422_SNP [dm6]	C	T	3.789e^-4	0.815	UPSTREAM ppk26 DOWNSTREAM CG42458 INTERGENIC
2L	7493058	2L_7493058_SNP [dm3] 2L_7493058_SNP [dm6]	G	C	3.800e^-4	0.815	INTRON Ziz
3R	25979031	3R_25979031_SNP [dm3] 3R_30153309_SNP [dm6]	C	G	3.800e^-4	0.815	SYNONYMOUS_CODING CG11498 DOWNSTREAM CG15529	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	15970409	X_15970409_SNP [dm3] X_16076376_SNP [dm6]	C	G	3.802e^-4	0.815	UTR_3_PRIME Tob	TF binding site mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_zfh1
3L	14569253	3L_14569253_SNP [dm3] 3L_14576153_SNP [dm6]	A	C	3.810e^-4	0.816	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	10224592	3R_10224592_SNP [dm3] 3R_14398870_SNP [dm6]	G	A	3.816e^-4	0.816	INTRON cv-c
2R	13136171	2R_13136171_SNP [dm3] 2R_17248666_SNP [dm6]	A	T	3.818e^-4	0.816	INTRON mbl
2R	15852928	2R_15852928_SNP [dm3] 2R_19965423_SNP [dm6]	G	T	3.829e^-4	0.816	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	16000118	2R_16000118_SNP [dm3] 2R_20112613_SNP [dm6]	A	G	3.829e^-4	0.816	SYNONYMOUS_CODING 18w	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	10201200	2R_10201200_SNP [dm3] 2R_14313695_SNP [dm6]	G	A	3.840e^-4	0.818	INTRON Shroom	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	17608511	2L_17608511_SNP [dm3] 2L_17608511_SNP [dm6]	T	A	3.855e^-4	0.818	INTERGENIC
2L	17682564	2L_17682564_SNP [dm3] 2L_17682564_SNP [dm6]	T	C	3.856e^-4	0.818	INTRON CadN
3L	18446551	3L_18446551_INS [dm3] 3L_18453451_INS [dm6]	T	TT	3.863e^-4	0.818	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	7068949	3L_7068949_SNP [dm3] 3L_7075849_SNP [dm6]	A	T	3.864e^-4	0.818	UPSTREAM CG34030 INTRON CG8641
2L	8258294	2L_8258294_SNP [dm3] 2L_8258294_SNP [dm6]	T	A	3.883e^-4	0.818	UPSTREAM CG8086 DOWNSTREAM Btk29A & 1 other INTERGENIC
3L	2319271	3L_2319271_SNP [dm3] 3L_2319271_SNP [dm6]	C	T	3.884e^-4	0.818	DOWNSTREAM CR45426 INTERGENIC
2L	5160239	2L_5160239_SNP [dm3] 2L_5160239_SNP [dm6]	A	G	3.885e^-4	0.818	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	4516823	2L_4516823_SNP [dm3] 2L_4516823_SNP [dm6]	G	C	3.886e^-4	0.818	SYNONYMOUS_CODING dp	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	5796761	3L_5796761_SNP [dm3] 3L_5803661_SNP [dm6]	C	A	3.887e^-4	0.818	UPSTREAM CG42272 INTRON S6k & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5160237	2L_5160237_SNP [dm3] 2L_5160237_SNP [dm6]	C	G	3.888e^-4	0.818	NON_SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	10872931	3R_10872931_DEL [dm3] 3R_15047209_DEL [dm6]	AA	G	3.897e^-4	0.818	INTERGENIC
3L	24386843	3L_24386843_SNP [dm3] 3L_24393743_SNP [dm6]	T	C	3.899e^-4	0.818	INTRON nvd
3R	15235197	3R_15235197_SNP [dm3] 3R_19409475_SNP [dm6]	G	A	3.906e^-4	0.818	SYNONYMOUS_CODING CG11626
2R	14336664	2R_14336664_SNP [dm3] 2R_18449159_SNP [dm6]	G	C	3.918e^-4	0.818	NON_SYNONYMOUS_CODING CG30120 UTR_3_PRIME CG5189 INTRON Prp19	TF binding site mE1_TFBS_cad
2R	14144667	2R_14144667_SNP [dm3] 2R_18257162_SNP [dm6]	G	A	3.919e^-4	0.818	EXON CR44421	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	16948779	3L_16948779_SNP [dm3] 3L_16955679_SNP [dm6]	T	C	3.923e^-4	0.818	UPSTREAM Nc73EF INTRON Nc73EF	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	5290050	X_5290050_SNP [dm3] X_5396017_SNP [dm6]	A	C	3.928e^-4	0.818	INTRON SK
3L	6072114	3L_6072114_SNP [dm3] 3L_6079014_SNP [dm6]	T	C	3.929e^-4	0.818	SYNONYMOUS_CODING CG6619	TF binding site mE1_TFBS_cad
3L	13699012	3L_13699012_SNP [dm3] 3L_13705912_SNP [dm6]	C	T	3.929e^-4	0.818	INTRON bru-3
X	8437013	X_8437013_DEL [dm3] X_8542980_DEL [dm6]	CTGTT	C	3.941e^-4	0.818	INTRON Nrg
2L	4523680	2L_4523680_SNP [dm3] 2L_4523680_SNP [dm6]	T	A	3.944e^-4	0.818	INTRON dp
3R	9246270	3R_9246270_SNP [dm3] 3R_13420548_SNP [dm6]	A	G	3.953e^-4	0.818	SYNONYMOUS_CODING Ir87a	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	14615644	X_14615644_SNP [dm3] X_14721611_SNP [dm6]	C	T	3.956e^-4	0.818	INTRON NetB
X	10920111	X_10920111_SNP [dm3] X_11026078_SNP [dm6]	C	T	3.957e^-4	0.818	INTRON CG42339
X	10920124	X_10920124_SNP [dm3] X_11026091_SNP [dm6]	T	A	3.967e^-4	0.818	INTRON CG42339
2R	12029115	2R_12029115_SNP [dm3] 2R_16141610_SNP [dm6]	C	T	3.972e^-4	0.818	UTR_3_PRIME Got1 UPSTREAM CG30094
3L	10480108	3L_10480108_SNP [dm3] 3L_10487008_SNP [dm6]	C	T	3.996e^-4	0.818	INTRON A2bp1
2L	14429643	2L_14429643_SNP [dm3] 2L_14429643_SNP [dm6]	A	C	3.999e^-4	0.818	EXON CR44732	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cnc mE1_TFBS_HSA
2R	18189665	2R_18189665_SNP [dm3] 2R_22302160_SNP [dm6]	T	A	4.000e^-4	0.818	UPSTREAM wdp INTRON wdp
3R	23952142	3R_23952142_SNP [dm3] 3R_28126420_SNP [dm6]	T	C	4.005e^-4	0.818	INTERGENIC
3R	4919456	3R_4919456_SNP [dm3] 3R_9093734_SNP [dm6]	C	T	4.005e^-4	0.818	INTRON pum
3R	25919132	3R_25919132_SNP [dm3] 3R_30093410_SNP [dm6]	A	G	4.010e^-4	0.818	INTRON sima
3L	9566829	3L_9566829_SNP [dm3] 3L_9573729_SNP [dm6]	T	C	4.011e^-4	0.818	INTRON CG42673
3R	5806070	3R_5806070_SNP [dm3] 3R_9980348_SNP [dm6]	T	A	4.016e^-4	0.818	INTRON Glut4EF
3R	14455016	3R_14455016_SNP [dm3] 3R_18629294_SNP [dm6]	C	T	4.023e^-4	0.818	UTR_3_PRIME CG14301 UPSTREAM tRNA:CR31228 INTRON qin
3L	14569177	3L_14569177_SNP [dm3] 3L_14576077_SNP [dm6]	G	A	4.025e^-4	0.818	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	953104	3L_953104_SNP [dm3] 3L_953104_SNP [dm6]	C	T	4.027e^-4	0.818	INTRON Glut1
2L	4505340	2L_4505340_SNP [dm3] 2L_4505340_SNP [dm6]	G	A	4.029e^-4	0.818	NON_SYNONYMOUS_CODING dp INTRON dp	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	12473033	3L_12473033_SNP [dm3] 3L_12479933_SNP [dm6]	T	C	4.031e^-4	0.818	INTRON CG10663
2L	16381665	2L_16381665_SNP [dm3] 2L_16381665_SNP [dm6]	T	A	4.032e^-4	0.818	INTERGENIC
X	5522538	X_5522538_SNP [dm3] X_5628505_SNP [dm6]	C	T	4.056e^-4	0.818	UTR_3_PRIME CG42492
2L	7459193	2L_7459193_SNP [dm3] 2L_7459193_SNP [dm6]	A	T	4.060e^-4	0.818	UPSTREAM Gr28b INTRON Gr28b
2R	12610642	2R_12610642_SNP [dm3] 2R_16723137_SNP [dm6]	T	A	4.066e^-4	0.818	INTRON CG30463
2R	1630737	2R_1630737_SNP [dm3] 2R_5743232_SNP [dm6]	A	T	4.079e^-4	0.818	INTERGENIC	regulatory region REDfly_CRMs
3R	24206117	3R_24206117_SNP [dm3] 3R_28380395_SNP [dm6]	T	G	4.082e^-4	0.818	INTERGENIC
2R	7033825	2R_7033825_SNP [dm3] 2R_11146320_SNP [dm6]	G	T	4.084e^-4	0.818	UTR_5_PRIME CG13231 INTRON CG13229
2R	10626272	2R_10626272_SNP [dm3] 2R_14738767_SNP [dm6]	C	T	4.091e^-4	0.818	DOWNSTREAM CG12858 EXON CR43428	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	15811757	X_15811757_SNP [dm3] X_15917724_SNP [dm6]	C	T	4.091e^-4	0.818	SYNONYMOUS_CODING CG8909	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	14569227	3L_14569227_SNP [dm3] 3L_14576127_SNP [dm6]	C	T	4.093e^-4	0.818	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	15569432	2R_15569432_SNP [dm3] 2R_19681927_SNP [dm6]	G	A	4.095e^-4	0.818	UPSTREAM CG15127 DOWNSTREAM CG34198 INTERGENIC	TF binding site mE1_TFBS_cad
2R	10950135	2R_10950135_SNP [dm3] 2R_15062630_SNP [dm6]	A	C	4.101e^-4	0.818	INTERGENIC
2R	7549130	2R_7549130_SNP [dm3] 2R_11661625_SNP [dm6]	A	G	4.114e^-4	0.818	UPSTREAM tRNA:M2:48Bb INTRON Roc2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
2L	2390189	2L_2390189_SNP [dm3] 2L_2390189_SNP [dm6]	C	T	4.121e^-4	0.818	SYNONYMOUS_CODING CG43750
X	16155272	X_16155272_SNP [dm3] X_16261239_SNP [dm6]	T	A	4.122e^-4	0.818	INTERGENIC
3L	14079083	3L_14079083_SNP [dm3] 3L_14085983_SNP [dm6]	T	G	4.124e^-4	0.818	DOWNSTREAM CG8100 INTERGENIC
2R	13598038	2R_13598038_SNP [dm3] 2R_17710533_SNP [dm6]	G	T	4.125e^-4	0.818	INTRON CG6424
2L	7813532	2L_7813532_SNP [dm3] 2L_7813532_SNP [dm6]	T	C	4.126e^-4	0.818	UPSTREAM LanB1 INTRON LanB1	TF binding site BDTNP1_TFBS_twi
2R	6037963	2R_6037963_SNP [dm3] 2R_10150458_SNP [dm6]	A	T	4.132e^-4	0.818	INTRON KCNQ
3L	4377214	3L_4377214_SNP [dm3] 3L_4377214_SNP [dm6]	G	T	4.133e^-4	0.818	DOWNSTREAM CR44360 INTRON DopEcR
3L	4377224	3L_4377224_SNP [dm3] 3L_4377224_SNP [dm6]	C	A	4.133e^-4	0.818	DOWNSTREAM CR44360 INTRON DopEcR
3L	4377226	3L_4377226_MNP [dm3] 3L_4377226_MNP [dm6]	GTA	AAG	4.133e^-4	0.818	DOWNSTREAM CR44360 INTRON DopEcR
2L	6494196	2L_6494196_SNP [dm3] 2L_6494196_SNP [dm6]	G	A	4.134e^-4	0.818	SYNONYMOUS_CODING CG9547 INTRON CG31638	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	8888197	2L_8888197_SNP [dm3] 2L_8888197_SNP [dm6]	C	T	4.134e^-4	0.818	UPSTREAM CR44415 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
3L	14134613	3L_14134613_SNP [dm3] 3L_14141513_SNP [dm6]	T	A	4.144e^-4	0.818	INTERGENIC	regulatory region REDfly_CRMs
2R	14332990	2R_14332990_SNP [dm3] 2R_18445485_SNP [dm6]	T	A	4.144e^-4	0.818	UTR_3_PRIME slim DOWNSTREAM slim	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_HSA
3R	14094198	3R_14094198_SNP [dm3] 3R_18268476_SNP [dm6]	G	A	4.145e^-4	0.818	INTRON CG18599
2R	13466869	2R_13466869_SNP [dm3] 2R_17579364_SNP [dm6]	T	A	4.146e^-4	0.818	INTRON Dcr-2	TF binding site BDTNP1_TFBS_prd
3L	7448507	3L_7448507_SNP [dm3] 3L_7455407_SNP [dm6]	A	G	4.147e^-4	0.818	UPSTREAM ppk26 DOWNSTREAM CG42458 INTERGENIC
2R	10853113	2R_10853113_SNP [dm3] 2R_14965608_SNP [dm6]	A	G	4.149e^-4	0.818	UPSTREAM ckn INTRON ckn	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_Trl
3L	17542768	3L_17542768_SNP [dm3] 3L_17549668_SNP [dm6]	C	T	4.160e^-4	0.818	UPSTREAM CG7542 & 1 other INTERGENIC
3L	5093944	3L_5093944_SNP [dm3] 3L_5093944_SNP [dm6]	C	G	4.171e^-4	0.818	INTERGENIC
2L	5887410	2L_5887410_SNP [dm3] 2L_5887410_SNP [dm6]	T	G	4.173e^-4	0.818	UPSTREAM CR44578 DOWNSTREAM CR44577 & 1 other EXON CR44577
3L	13131722	3L_13131722_SNP [dm3] 3L_13138622_SNP [dm6]	T	C	4.176e^-4	0.818	INTERGENIC
3L	10875196	3L_10875196_SNP [dm3] 3L_10882096_SNP [dm6]	C	T	4.180e^-4	0.818	UTR_5_PRIME CG6409 UPSTREAM CG7949 & 1 other
2L	7810877	2L_7810877_SNP [dm3] 2L_7810877_SNP [dm6]	G	A	4.188e^-4	0.818	UPSTREAM LanB1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
3L	995141	3L_995141_SNP [dm3] 3L_995141_SNP [dm6]	C	G	4.192e^-4	0.818	SYNONYMOUS_CODING CG12038 DOWNSTREAM trio	TF binding site mE1_TFBS_cad
3L	6394343	3L_6394343_SNP [dm3] 3L_6401243_SNP [dm6]	A	T	4.193e^-4	0.818	INTRON CG42747	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_sens
3R	5648105	3R_5648105_SNP [dm3] 3R_9822383_SNP [dm6]	C	A	4.194e^-4	0.818	DOWNSTREAM CG34302 INTERGENIC
3R	25014446	3R_25014446_SNP [dm3] 3R_29188724_SNP [dm6]	G	T	4.207e^-4	0.818	INTRON CG14509
2L	4346139	2L_4346139_SNP [dm3] 2L_4346139_SNP [dm6]	T	C	4.209e^-4	0.818	DOWNSTREAM Atet INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
2L	9692128	2L_9692128_SNP [dm3] 2L_9692128_SNP [dm6]	A	G	4.211e^-4	0.818	INTRON Pka-C1
3R	9738831	3R_9738831_SNP [dm3] 3R_13913109_SNP [dm6]	C	T	4.218e^-4	0.818	INTERGENIC	TF binding site mE1_TFBS_inv
3L	23170479	3L_23170479_SNP [dm3] 3L_23177379_SNP [dm6]	A	G	4.221e^-4	0.818	INTRON CG34031	transposable element FlyBase
2L	14146187	2L_14146187_SNP [dm3] 2L_14146187_SNP [dm6]	A	G	4.221e^-4	0.818	INTRON CG17341
3R	25068827	3R_25068827_SNP [dm3] 3R_29243105_SNP [dm6]	G	A	4.223e^-4	0.818	INTRON CG31445
2L	7454805	2L_7454805_SNP [dm3] 2L_7454805_SNP [dm6]	C	A	4.230e^-4	0.818	UPSTREAM Gr28a DOWNSTREAM Gr28b INTERGENIC
2L	3235299	2L_3235299_SNP [dm3] 2L_3235299_SNP [dm6]	G	A	4.237e^-4	0.818	INTERGENIC
3R	628672	3R_628672_SNP [dm3] 3R_4802950_SNP [dm6]	T	A	4.242e^-4	0.818	UPSTREAM ctrip INTRON ctrip	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2R	9979656	2R_9979656_SNP [dm3] 2R_14092151_SNP [dm6]	A	G	4.258e^-4	0.818	NON_SYNONYMOUS_CODING Prosap DOWNSTREAM CG42288
2L	5502830	2L_5502830_SNP [dm3] 2L_5502830_SNP [dm6]	A	G	4.266e^-4	0.818	INTERGENIC
2L	9338417	2L_9338417_SNP [dm3] 2L_9338417_SNP [dm6]	T	C	4.270e^-4	0.818	INTRON Eaat1
2L	9108562	2L_9108562_DEL [dm3] 2L_9108562_DEL [dm6]	GG	G	4.273e^-4	0.818	INTERGENIC
X	8634894	X_8634894_SNP [dm3] X_8740861_SNP [dm6]	A	G	4.275e^-4	0.818	INTERGENIC
X	2439879	X_2439879_SNP [dm3] X_2545846_SNP [dm6]	G	A	4.283e^-4	0.818	UPSTREAM mir-4955 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
X	11051435	X_11051435_SNP [dm3] X_11157402_SNP [dm6]	C	T	4.284e^-4	0.818	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	11051447	X_11051447_SNP [dm3] X_11157414_SNP [dm6]	G	A	4.284e^-4	0.818	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	11051474	X_11051474_SNP [dm3] X_11157441_SNP [dm6]	G	A	4.284e^-4	0.818	SYNONYMOUS_CODING CG32668 INTRON Dlic	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	16023566	X_16023566_SNP [dm3] X_16129533_SNP [dm6]	A	T	4.288e^-4	0.818	INTRON disco-r
2R	16027979	2R_16027979_SNP [dm3] 2R_20140474_SNP [dm6]	G	C	4.291e^-4	0.818	INTERGENIC
2R	12419799	2R_12419799_SNP [dm3] 2R_16532294_SNP [dm6]	G	T	4.301e^-4	0.818	INTRON Sema-2a
3L	11898795	3L_11898795_SNP [dm3] 3L_11905695_SNP [dm6]	T	A	4.308e^-4	0.818	INTRON CG44837
3L	14569125	3L_14569125_SNP [dm3] 3L_14576025_SNP [dm6]	T	G	4.313e^-4	0.818	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da
2L	7493459	2L_7493459_SNP [dm3] 2L_7493459_SNP [dm6]	G	C	4.313e^-4	0.818	INTRON Ziz
3R	12948688	3R_12948688_SNP [dm3] 3R_17122966_SNP [dm6]	G	T	4.321e^-4	0.818	UPSTREAM cher DOWNSTREAM CG42779 INTRON cher
2L	18242974	2L_18242974_INS [dm3] 2L_18242974_INS [dm6]	A	AT	4.321e^-4	0.818	INTRON CG42750
2R	10617455	2R_10617455_SNP [dm3] 2R_14729950_SNP [dm6]	A	G	4.330e^-4	0.818	INTERGENIC
3L	5689418	3L_5689418_SNP [dm3] 3L_5696318_SNP [dm6]	T	C	4.339e^-4	0.818	UTR_5_PRIME sif INTRON sif	TF binding site mE1_TFBS_chinmo
3L	5910990	3L_5910990_SNP [dm3] 3L_5917890_SNP [dm6]	A	G	4.340e^-4	0.818	UPSTREAM CR45167 DOWNSTREAM CG10483 & 1 other INTERGENIC
2R	17380022	2R_17380022_SNP [dm3] 2R_21492517_SNP [dm6]	T	C	4.341e^-4	0.818	INTRON Fkbp14
2L	8503709	2L_8503709_SNP [dm3] 2L_8503709_SNP [dm6]	T	C	4.344e^-4	0.818	INTRON Dh31
3L	4377164	3L_4377164_INS [dm3] 3L_4377164_INS [dm6]	A	ATATTAAAC	4.346e^-4	0.818	DOWNSTREAM CR44360 INTRON DopEcR
3L	4711874	3L_4711874_SNP [dm3] 3L_4711874_SNP [dm6]	C	A	4.347e^-4	0.818	INTRON RhoGEF64C
2L	7956410	2L_7956410_SNP [dm3] 2L_7956410_SNP [dm6]	A	G	4.361e^-4	0.818	INTRON Snoo	TF binding site mE1_TFBS_inv
X	8098093	X_8098093_SNP [dm3] X_8204060_SNP [dm6]	T	G	4.364e^-4	0.818	INTRON sdt	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	2139528	3L_2139528_SNP [dm3] 3L_2139528_SNP [dm6]	A	T	4.367e^-4	0.818	INTRON zormin	TF binding site mE1_TFBS_chinmo
3L	13060796	3L_13060796_SNP [dm3] 3L_13067696_SNP [dm6]	A	C	4.369e^-4	0.818	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
2R	16103672	2R_16103672_SNP [dm3] 2R_20216167_SNP [dm6]	T	C	4.382e^-4	0.818	INTERGENIC
2R	16103673	2R_16103673_SNP [dm3] 2R_20216168_SNP [dm6]	C	T	4.382e^-4	0.818	INTERGENIC
2R	7551219	2R_7551219_SNP [dm3] 2R_11663714_SNP [dm6]	T	G	4.386e^-4	0.818	INTRON Roc2	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl

By genomic position
Variant impact
Gene name

idx_Surv_10MeHg phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results