DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=5.056e^-20)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_2L_t	54.3202	1.6015e-12

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

4580 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2L	5074858	2L_5074858_DEL [dm3] 2L_5074858_DEL [dm6]	AA	A	1.758e^-8	0.033	INTRON pgant5
2L	2687538	2L_2687538_SNP [dm3] 2L_2687538_SNP [dm6]	C	T	8.225e^-8	0.06	INTRON CG31690
3R	1206780	3R_1206780_DEL [dm3] 3R_5381058_DEL [dm6]	AA	A	1.133e^-7	0.06	INTRON kkv
3R	20661039	3R_20661039_SNP [dm3] 3R_24835317_SNP [dm6]	T	C	1.554e^-7	0.06	UPSTREAM CR45216 & 1 other INTRON sosie	TF binding site BDTNP1_TFBS_dl
2L	4819399	2L_4819399_DEL [dm3] 2L_4819399_DEL [dm6]	AA	A	1.597e^-7	0.06	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	3217742	2L_3217742_DEL [dm3] 2L_3217742_DEL [dm6]	TA	T	4.707e^-7	0.147	INTERGENIC
2L	4820028	2L_4820028_DEL [dm3] 2L_4820028_DEL [dm6]	CATTGTC	C	6.349e^-7	0.148	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
X	19496052	X_19496052_INS [dm3] X_19602019_INS [dm6]	T	TTT	6.369e^-7	0.148	UPSTREAM CG14220 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	19895004	3R_19895004_SNP [dm3] 3R_24069282_SNP [dm6]	T	C	7.528e^-7	0.148	INTRON 4EHP
3R	20652144	3R_20652144_DEL [dm3] 3R_24826422_DEL [dm6]	ATATTTA	A	8.347e^-7	0.148	CODON_DELETION CG43166 UPSTREAM niki DOWNSTREAM RabX4
2L	2827074	2L_2827074_SNP [dm3] 2L_2827074_SNP [dm6]	A	G	9.721e^-7	0.148	INTRON Duox
3R	13166803	3R_13166803_SNP [dm3] 3R_17341081_SNP [dm6]	T	C	1.101e^-6	0.148	INTRON beat-IIa
2L	12279048	2L_12279048_SNP [dm3] 2L_12279048_SNP [dm6]	G	A	1.349e^-6	0.148	INTRON aret
2L	12283056	2L_12283056_SNP [dm3] 2L_12283056_SNP [dm6]	G	T	1.478e^-6	0.148	INTRON aret
2R	16762358	2R_16762358_SNP [dm3] 2R_20874853_SNP [dm6]	C	T	1.510e^-6	0.148	NON_SYNONYMOUS_CODING Ipk1 INTRON Ipk1
2L	2804588	2L_2804588_SNP [dm3] 2L_2804588_SNP [dm6]	C	G	1.683e^-6	0.148	UPSTREAM daw INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	13355483	3L_13355483_DEL [dm3] 3L_13362383_DEL [dm6]	AT	A	1.695e^-6	0.148	INTERGENIC
2R	6828776	2R_6828776_SNP [dm3] 2R_10941271_SNP [dm6]	T	C	1.752e^-6	0.148	SYNONYMOUS_CODING Spn47C
2L	2827081	2L_2827081_DEL [dm3] 2L_2827081_DEL [dm6]	GTTAG	G	2.117e^-6	0.148	INTRON Duox
3R	20476089	3R_20476089_DEL [dm3] 3R_24650367_DEL [dm6]	TT	T	2.197e^-6	0.148	UPSTREAM puf & 1 other INTRON ash2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
2L	2625695	2L_2625695_SNP [dm3] 2L_2625695_SNP [dm6]	C	A	2.206e^-6	0.148	EXON CR45705
2L	4861953	2L_4861953_DEL [dm3] 2L_4861953_DEL [dm6]	GG	G	2.227e^-6	0.148	INTRON pog
3R	20653625	3R_20653625_SNP [dm3] 3R_24827903_SNP [dm6]	C	T	2.336e^-6	0.148	SYNONYMOUS_CODING RabX4 DOWNSTREAM CG31357
3R	15489993	3R_15489993_SNP [dm3] 3R_19664271_SNP [dm6]	C	A	2.344e^-6	0.148	UPSTREAM CG7432 DOWNSTREAM ort INTERGENIC
2L	14846877	2L_14846877_SNP [dm3] 2L_14846877_SNP [dm6]	T	C	2.374e^-6	0.148	NON_SYNONYMOUS_CODING CG15279 INTRON CG15279
2L	10072028	2L_10072028_SNP [dm3] 2L_10072028_SNP [dm6]	G	C	2.510e^-6	0.148	INTRON CG44153
2L	2628645	2L_2628645_SNP [dm3] 2L_2628645_SNP [dm6]	C	G	2.697e^-6	0.148	UPSTREAM CR45705 INTERGENIC
2L	12289242	2L_12289242_SNP [dm3] 2L_12289242_SNP [dm6]	T	C	2.733e^-6	0.148	UTR_5_PRIME aret INTRON aret	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	4621187	2L_4621187_SNP [dm3] 2L_4621187_SNP [dm6]	A	G	2.776e^-6	0.148	DOWNSTREAM CR44609 INTERGENIC
2L	4830920	2L_4830920_SNP [dm3] 2L_4830920_SNP [dm6]	G	C	2.812e^-6	0.148	UTR_3_PRIME Ir25a UPSTREAM mir-4912 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA
2R	18066920	2R_18066920_DEL [dm3] 2R_22179415_DEL [dm6]	TT	T	2.831e^-6	0.148	UPSTREAM CG11170 & 1 other INTRON CG11170	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	4679336	2L_4679336_SNP [dm3] 2L_4679336_SNP [dm6]	A	G	2.996e^-6	0.148	INTERGENIC
2L	6707116	2L_6707116_DEL [dm3] 2L_6707116_DEL [dm6]	TCCC	T	3.126e^-6	0.148	INTRON Tsp
2L	3725084	2L_3725084_SNP [dm3] 2L_3725084_SNP [dm6]	G	A	3.165e^-6	0.148	UTR_3_PRIME Shaw INTRON Shaw
3R	13270270	3R_13270270_DEL [dm3] 3R_17444548_DEL [dm6]	TGT	T	3.397e^-6	0.148	INTRON CG5873
2L	19806150	2L_19806150_SNP [dm3] 2L_19806150_SNP [dm6]	A	G	3.434e^-6	0.148	INTRON sick
2L	2275192	2L_2275192_SNP [dm3] 2L_2275192_SNP [dm6]	G	A	3.546e^-6	0.148	DOWNSTREAM CR43753 INTRON CR43753
2L	3217451	2L_3217451_SNP [dm3] 2L_3217451_SNP [dm6]	G	C	3.614e^-6	0.148	INTERGENIC
2L	2626814	2L_2626814_SNP [dm3] 2L_2626814_SNP [dm6]	T	A	3.624e^-6	0.148	EXON CR45705
2L	4654535	2L_4654535_SNP [dm3] 2L_4654535_SNP [dm6]	G	A	3.666e^-6	0.148	INTERGENIC
2L	6779679	2L_6779679_INS [dm3] 2L_6779679_INS [dm6]	C	TCG	3.813e^-6	0.148	INTRON nrv1
3R	4134760	3R_4134760_SNP [dm3] 3R_8309038_SNP [dm6]	A	G	3.837e^-6	0.148	SYNONYMOUS_CODING CG11693 UPSTREAM mir-4918 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3R	15723694	3R_15723694_SNP [dm3] 3R_19897972_SNP [dm6]	G	A	3.852e^-6	0.148	SYNONYMOUS_CODING CG4733 DOWNSTREAM CG4538 INTRON CG4538
2L	2633508	2L_2633508_SNP [dm3] 2L_2633508_SNP [dm6]	A	T	3.945e^-6	0.148	INTERGENIC
3R	20652456	3R_20652456_SNP [dm3] 3R_24826734_SNP [dm6]	T	A	4.018e^-6	0.148	UTR_3_PRIME RabX4 UPSTREAM CG43166
3R	20652658	3R_20652658_SNP [dm3] 3R_24826936_SNP [dm6]	C	T	4.095e^-6	0.148	UTR_3_PRIME RabX4 UPSTREAM CG43166
X	3656985	X_3656985_INS [dm3] X_3762952_INS [dm6]	A	AAA	4.147e^-6	0.148	INTRON tlk
2L	4679586	2L_4679586_SNP [dm3] 2L_4679586_SNP [dm6]	G	C	4.178e^-6	0.148	INTERGENIC
2L	5196705	2L_5196705_SNP [dm3] 2L_5196705_SNP [dm6]	A	C	4.251e^-6	0.148	DOWNSTREAM snmRNA:128 INTRON Msp300	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA
3R	20652127	3R_20652127_SNP [dm3] 3R_24826405_SNP [dm6]	G	C	4.306e^-6	0.148	NON_SYNONYMOUS_CODING CG43166 UPSTREAM niki DOWNSTREAM RabX4
2L	2638381	2L_2638381_SNP [dm3] 2L_2638381_SNP [dm6]	C	T	4.345e^-6	0.148	INTERGENIC
2L	2998993	2L_2998993_SNP [dm3] 2L_2998993_SNP [dm6]	C	T	4.351e^-6	0.148	UPSTREAM CG17265 DOWNSTREAM CG3558 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_GATAe mE1_TFBS_h
2L	12552342	2L_12552342_SNP [dm3] 2L_12552342_SNP [dm6]	T	A	4.380e^-6	0.148	INTERGENIC
2L	2628627	2L_2628627_SNP [dm3] 2L_2628627_SNP [dm6]	A	G	4.381e^-6	0.148	UPSTREAM CR45705 INTERGENIC
2L	12283030	2L_12283030_SNP [dm3] 2L_12283030_SNP [dm6]	C	T	4.518e^-6	0.148	INTRON aret
2L	19549387	2L_19549387_INS [dm3] 2L_19549387_INS [dm6]	T	TGAAT	4.546e^-6	0.148	UPSTREAM Tep4 INTRON Tep4	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sbb
3R	20647928	3R_20647928_SNP [dm3] 3R_24822206_SNP [dm6]	C	G	4.845e^-6	0.148	UTR_3_PRIME Saf-B DOWNSTREAM niki	TF binding site mE1_TFBS_cad
2L	5026634	2L_5026634_SNP [dm3] 2L_5026634_SNP [dm6]	C	T	4.905e^-6	0.148	INTRON vkg	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
2L	4679653	2L_4679653_SNP [dm3] 2L_4679653_SNP [dm6]	G	A	5.097e^-6	0.148	INTERGENIC
3R	22741710	3R_22741710_SNP [dm3] 3R_26915988_SNP [dm6]	C	T	5.244e^-6	0.148	INTRON sda	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cnc mE1_TFBS_HSA
2L	2635320	2L_2635320_SNP [dm3] 2L_2635320_SNP [dm6]	A	C	5.257e^-6	0.148	INTERGENIC
3R	20652465	3R_20652465_SNP [dm3] 3R_24826743_SNP [dm6]	T	A	5.271e^-6	0.148	UTR_3_PRIME RabX4 UPSTREAM CG43166
3R	20652561	3R_20652561_SNP [dm3] 3R_24826839_SNP [dm6]	C	A	5.271e^-6	0.148	UTR_3_PRIME RabX4 UPSTREAM CG43166
2L	2827068	2L_2827068_SNP [dm3] 2L_2827068_SNP [dm6]	A	T	5.292e^-6	0.148	INTRON Duox
3R	20652517	3R_20652517_INS [dm3] 3R_24826795_INS [dm6]	A	AGTGTACCTTA...	5.333e^-6	0.148	UTR_3_PRIME RabX4 UPSTREAM CG43166
2R	4171853	2R_4171853_SNP [dm3] 2R_8284348_SNP [dm6]	T	A	5.339e^-6	0.148	INTERGENIC
2L	19004441	2L_19004441_SNP [dm3] 2L_19004441_SNP [dm6]	T	A	5.377e^-6	0.148	INTRON CG31793	TF binding site mE1_TFBS_chinmo
3R	24253120	3R_24253120_SNP [dm3] 3R_28427398_SNP [dm6]	T	G	5.391e^-6	0.148	INTRON beat-VI
3L	6293706	3L_6293706_INS [dm3] 3L_6300606_INS [dm6]	T	TAG	5.499e^-6	0.148	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	20652128	3R_20652128_SNP [dm3] 3R_24826406_SNP [dm6]	G	A	5.510e^-6	0.148	SYNONYMOUS_CODING CG43166 UPSTREAM niki DOWNSTREAM RabX4
3R	20647912	3R_20647912_DEL [dm3] 3R_24822190_DEL [dm6]	AGG	A	5.721e^-6	0.151	UTR_3_PRIME Saf-B DOWNSTREAM niki	TF binding site mE1_TFBS_cad
2L	2921664	2L_2921664_SNP [dm3] 2L_2921664_SNP [dm6]	G	C	5.788e^-6	0.151	INTRON lilli
2L	2637971	2L_2637971_SNP [dm3] 2L_2637971_SNP [dm6]	A	G	6.157e^-6	0.155	INTERGENIC
2L	4833550	2L_4833550_SNP [dm3] 2L_4833550_SNP [dm6]	A	G	6.249e^-6	0.155	SYNONYMOUS_CODING Ir25a
3R	22520225	3R_22520225_INS [dm3] 3R_26694503_INS [dm6]	G	GTTGG	6.388e^-6	0.155	UPSTREAM TwdlQ INTERGENIC
3R	25222382	3R_25222382_DEL [dm3] 3R_29396660_DEL [dm6]	AG	A	6.468e^-6	0.155	INTRON Ptp99A
2L	2632286	2L_2632286_SNP [dm3] 2L_2632286_SNP [dm6]	G	A	6.601e^-6	0.155	INTERGENIC
2R	19616121	2R_19616121_DEL [dm3] 2R_23728598_DEL [dm6]	GG	A	6.681e^-6	0.155	INTRON Sesn
2L	12552359	2L_12552359_SNP [dm3] 2L_12552359_SNP [dm6]	G	A	6.780e^-6	0.155	INTERGENIC
2L	12552355	2L_12552355_SNP [dm3] 2L_12552355_SNP [dm6]	T	C	6.845e^-6	0.155	INTERGENIC
3R	20652418	3R_20652418_SNP [dm3] 3R_24826696_SNP [dm6]	C	G	6.860e^-6	0.155	UTR_3_PRIME RabX4 UPSTREAM CG43166
3R	20656469	3R_20656469_SNP [dm3] 3R_24830747_SNP [dm6]	G	A	6.930e^-6	0.155	START_LOST CG43273 NON_SYNONYMOUS_CODING CG43273 UPSTREAM CG31357	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	20651809	3R_20651809_SNP [dm3] 3R_24826087_SNP [dm6]	A	G	6.986e^-6	0.155	UPSTREAM niki DOWNSTREAM RabX4 INTRON CG43166	transposable element FlyBase
3R	20647911	3R_20647911_SNP [dm3] 3R_24822189_SNP [dm6]	G	T	7.008e^-6	0.155	UTR_3_PRIME Saf-B DOWNSTREAM niki	TF binding site mE1_TFBS_cad
2L	4830032	2L_4830032_SNP [dm3] 2L_4830032_SNP [dm6]	C	T	7.055e^-6	0.155	SPLICE_SITE_REGION CG2976 DOWNSTREAM Ir25a INTRON CG2976 EXON mir-4912	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
2L	4861942	2L_4861942_SNP [dm3] 2L_4861942_SNP [dm6]	A	G	7.089e^-6	0.155	INTRON pog
2L	12043031	2L_12043031_DEL [dm3] 2L_12043031_DEL [dm6]	GG	G	7.191e^-6	0.155	UTR_5_PRIME CG6785	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	20660703	3R_20660703_SNP [dm3] 3R_24834981_SNP [dm6]	T	C	7.358e^-6	0.155	UPSTREAM CR45216 & 1 other INTRON sosie
3R	13166776	3R_13166776_SNP [dm3] 3R_17341054_SNP [dm6]	G	C	7.422e^-6	0.155	INTRON beat-IIa
2L	12280905	2L_12280905_SNP [dm3] 2L_12280905_SNP [dm6]	A	C	7.482e^-6	0.155	INTRON aret	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	5664884	2R_5664884_DEL [dm3] 2R_9777379_DEL [dm6]	GCCCAGAACTCAG...	G	7.636e^-6	0.155	INTRON CG1688
2L	12289447	2L_12289447_SNP [dm3] 2L_12289447_SNP [dm6]	T	G	7.661e^-6	0.155	INTRON aret
2L	2276015	2L_2276015_SNP [dm3] 2L_2276015_SNP [dm6]	G	C	7.729e^-6	0.155	INTRON CR43753 EXON CR43753
3R	20655889	3R_20655889_SNP [dm3] 3R_24830167_SNP [dm6]	T	C	7.968e^-6	0.155	UPSTREAM CG43273 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
2L	2617684	2L_2617684_SNP [dm3] 2L_2617684_SNP [dm6]	C	T	8.051e^-6	0.155	INTERGENIC
3L	17023818	3L_17023818_SNP [dm3] 3L_17030718_SNP [dm6]	G	T	8.081e^-6	0.155	SYNONYMOUS_CODING Ilp8 DOWNSTREAM CG7730
X	19011897	X_19011897_INS [dm3] X_19117864_INS [dm6]	G	GG	8.111e^-6	0.155	INTERGENIC
2L	12552322	2L_12552322_SNP [dm3] 2L_12552322_SNP [dm6]	C	T	8.153e^-6	0.155	INTERGENIC
2L	4833523	2L_4833523_SNP [dm3] 2L_4833523_SNP [dm6]	T	C	8.166e^-6	0.155	SYNONYMOUS_CODING Ir25a
2L	4862010	2L_4862010_SNP [dm3] 2L_4862010_SNP [dm6]	T	C	8.368e^-6	0.157	INTRON pog
2L	12552395	2L_12552395_SNP [dm3] 2L_12552395_SNP [dm6]	G	C	8.556e^-6	0.157	INTERGENIC
2L	3405028	2L_3405028_SNP [dm3] 2L_3405028_SNP [dm6]	A	G	8.594e^-6	0.157	UTR_3_PRIME pgant2
2R	16762359	2R_16762359_SNP [dm3] 2R_20874854_SNP [dm6]	C	T	8.597e^-6	0.157	NON_SYNONYMOUS_CODING Ipk1 INTRON Ipk1
X	16519235	X_16519235_DEL [dm3] X_16625202_DEL [dm6]	AA	A	8.902e^-6	0.161	UTR_3_PRIME Rok INTRON Rok
2L	2275942	2L_2275942_SNP [dm3] 2L_2275942_SNP [dm6]	C	G	9.160e^-6	0.162	INTRON CR43753 EXON CR43753
2L	2151471	2L_2151471_DEL [dm3] 2L_2151471_DEL [dm6]	TAATATATATTAATG...	CC	9.167e^-6	0.162	UTR_3_PRIME CG7261 UPSTREAM AIF	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	4679469	2L_4679469_SNP [dm3] 2L_4679469_SNP [dm6]	T	A	9.355e^-6	0.164	INTERGENIC
3R	20656837	3R_20656837_DEL [dm3] 3R_24831115_DEL [dm6]	TTCATTTCGTTTCATT...	T	9.518e^-6	0.164	DOWNSTREAM CG43273 INTERGENIC	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	4678870	2L_4678870_SNP [dm3] 2L_4678870_SNP [dm6]	T	A	9.711e^-6	0.164	INTERGENIC
2L	5022529	2L_5022529_SNP [dm3] 2L_5022529_SNP [dm6]	T	C	9.922e^-6	0.164	INTRON vkg
2R	6437763	2R_6437763_SNP [dm3] 2R_10550258_SNP [dm6]	G	A	9.954e^-6	0.164	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
3R	20655971	3R_20655971_SNP [dm3] 3R_24830249_SNP [dm6]	C	T	1.002e^-5	0.164	UPSTREAM CG43273 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3R	20659218	3R_20659218_SNP [dm3] 3R_24833496_SNP [dm6]	C	G	1.003e^-5	0.164	UPSTREAM sosie INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	7491520	X_7491520_SNP [dm3] X_7597487_SNP [dm6]	G	A	1.016e^-5	0.164	INTERGENIC	regulatory region REDfly_CRMs
3R	20656183	3R_20656183_SNP [dm3] 3R_24830461_SNP [dm6]	G	A	1.020e^-5	0.164	NON_SYNONYMOUS_CODING CG43273 START_GAINED CG43273 UTR_5_PRIME CG43273 UPSTREAM CG31357	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_Ubx
2L	993573	2L_993573_SNP [dm3] 2L_993573_SNP [dm6]	G	A	1.028e^-5	0.164	INTERGENIC
3R	20652318	3R_20652318_SNP [dm3] 3R_24826596_SNP [dm6]	C	A	1.031e^-5	0.164	UPSTREAM niki & 1 other DOWNSTREAM RabX4 INTERGENIC
3R	20652308	3R_20652308_DEL [dm3] 3R_24826586_DEL [dm6]	TTA	T	1.031e^-5	0.164	UPSTREAM niki & 1 other DOWNSTREAM RabX4 INTERGENIC
2L	4833570	2L_4833570_SNP [dm3] 2L_4833570_SNP [dm6]	G	A	1.063e^-5	0.166	SYNONYMOUS_CODING Ir25a
2L	19011676	2L_19011676_INS [dm3] 2L_19011676_INS [dm6]	T	TT	1.064e^-5	0.166	UPSTREAM CR45292 DOWNSTREAM robl37BC INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	4873641	2L_4873641_SNP [dm3] 2L_4873641_SNP [dm6]	A	C	1.135e^-5	0.168	UTR_3_PRIME pog INTRON pog
2L	4873659	2L_4873659_SNP [dm3] 2L_4873659_SNP [dm6]	T	C	1.135e^-5	0.168	UTR_3_PRIME pog INTRON pog
2L	4654529	2L_4654529_SNP [dm3] 2L_4654529_SNP [dm6]	A	G	1.176e^-5	0.168	INTERGENIC
3R	20660826	3R_20660826_SNP [dm3] 3R_24835104_SNP [dm6]	C	A	1.193e^-5	0.168	UPSTREAM CR45216 & 1 other INTRON sosie
2L	5101705	2L_5101705_DEL [dm3] 2L_5101705_DEL [dm6]	GG	G	1.214e^-5	0.168	INTRON Msp300
2L	4688671	2L_4688671_SNP [dm3] 2L_4688671_SNP [dm6]	C	A	1.221e^-5	0.168	SYNONYMOUS_CODING Elba3 DOWNSTREAM CG3251
2R	1689055	2R_1689055_DEL [dm3] 2R_5801550_DEL [dm6]	TATGTACATATGTGTATGT...	T	1.224e^-5	0.168	INTERGENIC
2L	12254195	2L_12254195_SNP [dm3] 2L_12254195_SNP [dm6]	T	C	1.238e^-5	0.168	INTRON aret
3R	25222390	3R_25222390_SNP [dm3] 3R_29396668_SNP [dm6]	A	T	1.240e^-5	0.168	INTRON Ptp99A
3R	20652525	3R_20652525_SNP [dm3] 3R_24826803_SNP [dm6]	C	T	1.240e^-5	0.168	UTR_3_PRIME RabX4 UPSTREAM CG43166
2L	2443910	2L_2443910_DEL [dm3] 2L_2443910_DEL [dm6]	TATAAATGCAAGTGA...	T	1.251e^-5	0.168	INTRON dpp	enhancer FlyBase regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
2L	12282959	2L_12282959_SNP [dm3] 2L_12282959_SNP [dm6]	T	G	1.262e^-5	0.168	INTRON aret
2L	4059197	2L_4059197_SNP [dm3] 2L_4059197_SNP [dm6]	C	T	1.265e^-5	0.168	INTRON ed
2L	16110782	2L_16110782_SNP [dm3] 2L_16110782_SNP [dm6]	A	G	1.273e^-5	0.168	INTERGENIC
3R	25222387	3R_25222387_INS [dm3] 3R_29396665_INS [dm6]	GC	AGATA	1.274e^-5	0.168	INTRON Ptp99A
3R	25222391	3R_25222391_SNP [dm3] 3R_29396669_SNP [dm6]	C	G	1.291e^-5	0.168	INTRON Ptp99A
2R	765916	2R_765916_DEL [dm3] 2R_4878411_DEL [dm6]	AGA	A	1.306e^-5	0.168	INTERGENIC
3R	20662293	3R_20662293_INS [dm3] 3R_24836571_INS [dm6]	A	ACTCA	1.320e^-5	0.168	UPSTREAM sosie DOWNSTREAM CR45216 INTRON sosie
2L	1102984	2L_1102984_DEL [dm3] 2L_1102984_DEL [dm6]	AA	A	1.322e^-5	0.168	UPSTREAM CG4629 DOWNSTREAM mtRNApol INTERGENIC
2L	2687405	2L_2687405_SNP [dm3] 2L_2687405_SNP [dm6]	C	A	1.331e^-5	0.168	INTRON CG31690
2L	2075830	2L_2075830_SNP [dm3] 2L_2075830_SNP [dm6]	A	G	1.336e^-5	0.168	INTRON dpr3
3R	20659073	3R_20659073_SNP [dm3] 3R_24833351_SNP [dm6]	C	T	1.342e^-5	0.168	UPSTREAM sosie INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	2635424	2L_2635424_SNP [dm3] 2L_2635424_SNP [dm6]	A	G	1.348e^-5	0.168	INTERGENIC
2L	19715057	2L_19715057_DEL [dm3] 2L_19715057_DEL [dm6]	CACCGGGC	C	1.353e^-5	0.168	INTRON Lar	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
2L	3726103	2L_3726103_DEL [dm3] 2L_3726103_DEL [dm6]	CCCC	A	1.359e^-5	0.168	INTRON Shaw
3R	25210361	3R_25210361_SNP [dm3] 3R_29384639_SNP [dm6]	G	T	1.375e^-5	0.168	INTRON Ptp99A
2L	12126417	2L_12126417_SNP [dm3] 2L_12126417_SNP [dm6]	G	T	1.383e^-5	0.168	SYNONYMOUS_CODING CG17211
2R	16862028	2R_16862028_SNP [dm3] 2R_20974523_SNP [dm6]	A	G	1.387e^-5	0.168	UPSTREAM CG15649 & 1 other INTERGENIC
2L	13975947	2L_13975947_DEL [dm3] 2L_13975947_DEL [dm6]	ATAA	A	1.399e^-5	0.168	INTRON NimC1
2L	4621171	2L_4621171_SNP [dm3] 2L_4621171_SNP [dm6]	G	T	1.402e^-5	0.168	DOWNSTREAM CR44609 INTERGENIC
2R	7280573	2R_7280573_DEL [dm3] 2R_11393068_DEL [dm6]	CAAGTGATC	C	1.434e^-5	0.168	INTRON sprt
2L	2921056	2L_2921056_DEL [dm3] 2L_2921056_DEL [dm6]	CGGAGT	C	1.435e^-5	0.168	INTRON lilli
2L	5075134	2L_5075134_SNP [dm3] 2L_5075134_SNP [dm6]	G	T	1.447e^-5	0.168	INTRON pgant5
3R	20652320	3R_20652320_SNP [dm3] 3R_24826598_SNP [dm6]	C	T	1.452e^-5	0.168	UPSTREAM niki & 1 other DOWNSTREAM RabX4 INTERGENIC
2L	21064263	2L_21064263_SNP [dm3] 2L_21064263_SNP [dm6]	T	C	1.453e^-5	0.168	INTRON CG9265	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
3R	20652534	3R_20652534_SNP [dm3] 3R_24826812_SNP [dm6]	T	C	1.455e^-5	0.168	UTR_3_PRIME RabX4 UPSTREAM CG43166
2L	12513733	2L_12513733_SNP [dm3] 2L_12513733_SNP [dm6]	T	C	1.458e^-5	0.168	INTRON bun
2L	4861684	2L_4861684_SNP [dm3] 2L_4861684_SNP [dm6]	C	A	1.461e^-5	0.168	INTRON pog
3R	25222566	3R_25222566_SNP [dm3] 3R_29396844_SNP [dm6]	C	T	1.480e^-5	0.168	INTRON Ptp99A
2L	4831046	2L_4831046_SNP [dm3] 2L_4831046_SNP [dm6]	C	G	1.482e^-5	0.168	SYNONYMOUS_CODING Ir25a UPSTREAM CG2976	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	10393778	2L_10393778_SNP [dm3] 2L_10393778_SNP [dm6]	G	A	1.487e^-5	0.168	UTR_3_PRIME Mdh1 DOWNSTREAM da & 1 other	TF binding site mE1_TFBS_cad
2L	13109843	2L_13109843_SNP [dm3] 2L_13109843_SNP [dm6]	C	A	1.507e^-5	0.168	DOWNSTREAM CG5142 INTERGENIC
3R	17398104	3R_17398104_SNP [dm3] 3R_21572382_SNP [dm6]	G	T	1.513e^-5	0.168	UTR_3_PRIME InR
2L	13157086	2L_13157086_SNP [dm3] 2L_13157086_SNP [dm6]	A	G	1.514e^-5	0.168	INTERGENIC
2L	2634891	2L_2634891_SNP [dm3] 2L_2634891_SNP [dm6]	A	T	1.515e^-5	0.168	INTERGENIC
3R	20651432	3R_20651432_SNP [dm3] 3R_24825710_SNP [dm6]	T	C	1.530e^-5	0.168	UPSTREAM niki DOWNSTREAM CG43166 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad
2R	4879898	2R_4879898_DEL [dm3] 2R_8992393_DEL [dm6]	AATTCGTGTAA...	A	1.553e^-5	0.168	DOWNSTREAM Np INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_zfh1
2L	2695673	2L_2695673_SNP [dm3] 2L_2695673_SNP [dm6]	G	A	1.558e^-5	0.168	SYNONYMOUS_CODING CG15398 INTRON CG31690	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	3726053	2L_3726053_SNP [dm3] 2L_3726053_SNP [dm6]	A	T	1.561e^-5	0.168	INTRON Shaw
3R	25210366	3R_25210366_SNP [dm3] 3R_29384644_SNP [dm6]	G	C	1.565e^-5	0.168	INTRON Ptp99A
3R	24741850	3R_24741850_SNP [dm3] 3R_28916128_SNP [dm6]	G	T	1.571e^-5	0.168	INTRON Doa
2L	1821840	2L_1821840_SNP [dm3] 2L_1821840_SNP [dm6]	G	T	1.575e^-5	0.168	SYNONYMOUS_CODING CG31933
2L	2276448	2L_2276448_SNP [dm3] 2L_2276448_SNP [dm6]	G	T	1.586e^-5	0.168	INTRON CR43753
X	16679364	X_16679364_DEL [dm3] X_16785331_DEL [dm6]	CGGATGTTTCTGAACGCAAA...	C	1.590e^-5	0.168	UTR_3_PRIME CG9609 DOWNSTREAM mRpL22
2L	4617239	2L_4617239_DEL [dm3] 2L_4617239_DEL [dm6]	TTAATACAAGAAAACTTTCT...	T	1.603e^-5	0.168	INTERGENIC
2R	18341642	2R_18341642_DEL [dm3] 2R_22454137_DEL [dm6]	GGAG	G	1.609e^-5	0.168	UPSTREAM CG10384 INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	21861112	3L_21861112_SNP [dm3] 3L_21868012_SNP [dm6]	A	C	1.610e^-5	0.168	INTRON mub	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20655929	3R_20655929_SNP [dm3] 3R_24830207_SNP [dm6]	T	C	1.616e^-5	0.168	UPSTREAM CG43273 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3R	20652655	3R_20652655_SNP [dm3] 3R_24826933_SNP [dm6]	T	A	1.619e^-5	0.168	UTR_3_PRIME RabX4 UPSTREAM CG43166
2L	9918493	2L_9918493_DEL [dm3] 2L_9918493_DEL [dm6]	GGCTTACTGGG...	AACTACC	1.620e^-5	0.168	UPSTREAM CG4598 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_HSA
2L	1711319	2L_1711319_SNP [dm3] 2L_1711319_SNP [dm6]	T	A	1.622e^-5	0.168	UTR_3_PRIME mRpL48 & 1 other UPSTREAM CG17660 DOWNSTREAM frtz	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	4718056	2L_4718056_SNP [dm3] 2L_4718056_SNP [dm6]	T	C	1.645e^-5	0.17	INTRON CG34351
3R	20652545	3R_20652545_SNP [dm3] 3R_24826823_SNP [dm6]	C	T	1.657e^-5	0.17	UTR_3_PRIME RabX4 UPSTREAM CG43166
2L	2998925	2L_2998925_SNP [dm3] 2L_2998925_SNP [dm6]	T	C	1.664e^-5	0.17	UPSTREAM CG17265 DOWNSTREAM CG3558 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_GATAe mE1_TFBS_h
3R	20652374	3R_20652374_SNP [dm3] 3R_24826652_SNP [dm6]	A	G	1.682e^-5	0.17	UPSTREAM CG43166 DOWNSTREAM RabX4 INTERGENIC
2L	1102987	2L_1102987_SNP [dm3] 2L_1102987_SNP [dm6]	C	A	1.682e^-5	0.17	UPSTREAM CG4629 DOWNSTREAM mtRNApol INTERGENIC
2L	13466591	2L_13466591_SNP [dm3] 2L_13466591_SNP [dm6]	G	A	1.705e^-5	0.17	INTRON CG42784
2L	650366	2L_650366_SNP [dm3] 2L_650366_SNP [dm6]	A	C	1.711e^-5	0.17	INTRON ds
2L	12277245	2L_12277245_SNP [dm3] 2L_12277245_SNP [dm6]	G	A	1.719e^-5	0.17	INTRON aret
2R	6820388	2R_6820388_DEL [dm3] 2R_10932883_DEL [dm6]	TACAAAAACTTTAAGTCGTA...	T	1.732e^-5	0.17	INTERGENIC
2L	2880060	2L_2880060_SNP [dm3] 2L_2880060_SNP [dm6]	C	T	1.738e^-5	0.17	SYNONYMOUS_CODING betaggt-II DOWNSTREAM NTPase	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo
2L	2077403	2L_2077403_SNP [dm3] 2L_2077403_SNP [dm6]	T	C	1.763e^-5	0.17	INTRON dpr3	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	2581852	2L_2581852_SNP [dm3] 2L_2581852_SNP [dm6]	T	C	1.763e^-5	0.17	DOWNSTREAM Arpc5 INTRON Drp1	TF binding site mE1_TFBS_sens
2L	4256555	2L_4256555_DEL [dm3] 2L_4256555_DEL [dm6]	TT	T	1.765e^-5	0.17	UPSTREAM CR45294 & 1 other DOWNSTREAM CR45296 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1
X	3658363	X_3658363_INS [dm3] X_3764330_INS [dm6]	A	AA	1.774e^-5	0.17	INTRON tlk	TF binding site BDTNP1_TFBS_dl
X	4472554	X_4472554_INS [dm3] X_4578521_INS [dm6]	C	CA	1.777e^-5	0.17	INTRON CR32773	TF binding site BDTNP1_TFBS_da
2L	2643184	2L_2643184_INS [dm3] 2L_2643184_INS [dm6]	G	GTTGGCAGTTT...	1.782e^-5	0.17	INTERGENIC
X	8016611	X_8016611_SNP [dm3] X_8122578_SNP [dm6]	T	A	1.803e^-5	0.171	INTRON cyr
2L	2086814	2L_2086814_SNP [dm3] 2L_2086814_SNP [dm6]	A	G	1.833e^-5	0.171	INTRON dpr3
2L	12552334	2L_12552334_SNP [dm3] 2L_12552334_SNP [dm6]	A	C	1.838e^-5	0.171	INTERGENIC
3R	20653991	3R_20653991_SNP [dm3] 3R_24828269_SNP [dm6]	C	A	1.841e^-5	0.171	UTR_5_PRIME RabX4 DOWNSTREAM CG31357
3R	20652559	3R_20652559_SNP [dm3] 3R_24826837_SNP [dm6]	T	A	1.841e^-5	0.171	UTR_3_PRIME RabX4 UPSTREAM CG43166
2L	10427278	2L_10427278_SNP [dm3] 2L_10427278_SNP [dm6]	G	C	1.863e^-5	0.172	SYNONYMOUS_CODING KdelR UPSTREAM SmB	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	6293700	3L_6293700_SNP [dm3] 3L_6300600_SNP [dm6]	T	A	1.903e^-5	0.172	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	18329829	3L_18329829_INS [dm3] 3L_18336729_INS [dm6]	T	TT	1.907e^-5	0.172	INTERGENIC
3R	15263753	3R_15263753_SNP [dm3] 3R_19438031_SNP [dm6]	T	C	1.915e^-5	0.172	INTRON CG31221
3R	21410608	3R_21410608_SNP [dm3] 3R_25584886_SNP [dm6]	T	G	1.955e^-5	0.172	INTRON msi	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	16996015	3R_16996015_SNP [dm3] 3R_21170293_SNP [dm6]	T	A	1.957e^-5	0.172	INTRON SNF4Agamma
3R	20659210	3R_20659210_SNP [dm3] 3R_24833488_SNP [dm6]	A	T	1.962e^-5	0.172	UPSTREAM sosie INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	25222291	3R_25222291_SNP [dm3] 3R_29396569_SNP [dm6]	C	A	1.970e^-5	0.172	INTRON Ptp99A
3R	26707055	3R_26707055_SNP [dm3] 3R_30881333_SNP [dm6]	T	A	1.980e^-5	0.172	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	2276396	2L_2276396_SNP [dm3] 2L_2276396_SNP [dm6]	A	T	1.984e^-5	0.172	INTRON CR43753
2L	2276405	2L_2276405_SNP [dm3] 2L_2276405_SNP [dm6]	T	G	1.984e^-5	0.172	INTRON CR43753
2L	12552337	2L_12552337_INS [dm3] 2L_12552337_INS [dm6]	A	AT	1.988e^-5	0.172	INTERGENIC
3R	26707030	3R_26707030_SNP [dm3] 3R_30881308_SNP [dm6]	T	A	1.988e^-5	0.172	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	802276	2L_802276_DEL [dm3] 2L_802276_DEL [dm6]	ACTA	A	1.994e^-5	0.172	INTERGENIC
2L	2632264	2L_2632264_SNP [dm3] 2L_2632264_SNP [dm6]	C	A	1.996e^-5	0.172	INTERGENIC
2L	4654519	2L_4654519_SNP [dm3] 2L_4654519_SNP [dm6]	C	T	1.997e^-5	0.172	INTERGENIC
2L	16632557	2L_16632557_INS [dm3] 2L_16632557_INS [dm6]	A	ACATGTA	2.031e^-5	0.173	INTRON CG42389
3R	20655999	3R_20655999_SNP [dm3] 3R_24830277_SNP [dm6]	G	A	2.032e^-5	0.173	UPSTREAM CG43273 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
2L	6631112	2L_6631112_SNP [dm3] 2L_6631112_SNP [dm6]	G	A	2.040e^-5	0.173	INTRON Oatp26F
3R	15169676	3R_15169676_SNP [dm3] 3R_19343954_SNP [dm6]	A	G	2.075e^-5	0.175	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
X	7997438	X_7997438_DEL [dm3] X_8103405_DEL [dm6]	CTTCGCC	C	2.077e^-5	0.175	UTR_3_PRIME Gclc
2L	12299882	2L_12299882_SNP [dm3] 2L_12299882_SNP [dm6]	G	T	2.087e^-5	0.175	INTRON aret
2L	4617438	2L_4617438_SNP [dm3] 2L_4617438_SNP [dm6]	C	T	2.098e^-5	0.175	INTERGENIC
2R	11769496	2R_11769496_DEL [dm3] 2R_15881991_DEL [dm6]	TATTC	T	2.117e^-5	0.176	INTRON sli
2R	11772275	2R_11772275_INS [dm3] 2R_15884770_INS [dm6]	G	GATGTG	2.133e^-5	0.176	INTRON sli
2L	6707121	2L_6707121_SNP [dm3] 2L_6707121_SNP [dm6]	A	T	2.164e^-5	0.178	INTRON Tsp
3R	24743357	3R_24743357_SNP [dm3] 3R_28917635_SNP [dm6]	A	T	2.233e^-5	0.179	NON_SYNONYMOUS_CODING Doa INTRON Doa	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15472880	2R_15472880_SNP [dm3] 2R_19585375_SNP [dm6]	C	T	2.233e^-5	0.179	INTRON sm
2R	15472892	2R_15472892_SNP [dm3] 2R_19585387_SNP [dm6]	G	A	2.233e^-5	0.179	INTRON sm
3R	20652657	3R_20652657_SNP [dm3] 3R_24826935_SNP [dm6]	G	A	2.238e^-5	0.179	UTR_3_PRIME RabX4 UPSTREAM CG43166
2L	2429475	2L_2429475_INS [dm3] 2L_2429475_INS [dm6]	T	TCAAT	2.244e^-5	0.179	INTRON dpp
3R	20660824	3R_20660824_SNP [dm3] 3R_24835102_SNP [dm6]	T	C	2.244e^-5	0.179	UPSTREAM CR45216 & 1 other INTRON sosie
3R	26709662	3R_26709662_SNP [dm3] 3R_30883940_SNP [dm6]	A	G	2.262e^-5	0.179	UPSTREAM CG15547 INTRON Sap-r	TF binding site mE1_TFBS_cad
3R	26174550	3R_26174550_SNP [dm3] 3R_30348828_SNP [dm6]	A	T	2.264e^-5	0.179	INTRON hdc
2L	4617301	2L_4617301_SNP [dm3] 2L_4617301_SNP [dm6]	C	T	2.279e^-5	0.179	INTERGENIC
2L	4617343	2L_4617343_SNP [dm3] 2L_4617343_SNP [dm6]	A	T	2.279e^-5	0.179	INTERGENIC
2L	2610843	2L_2610843_SNP [dm3] 2L_2610843_SNP [dm6]	G	A	2.293e^-5	0.179	SYNONYMOUS_CODING CG15395	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
3L	17025857	3L_17025857_DEL [dm3] 3L_17032757_DEL [dm6]	CTC	C	2.296e^-5	0.179	UPSTREAM Ilp8 & 1 other DOWNSTREAM CR43250 INTERGENIC	TF binding site mE1_TFBS_Trl
3R	20652379	3R_20652379_SNP [dm3] 3R_24826657_SNP [dm6]	C	A	2.337e^-5	0.182	UPSTREAM CG43166 DOWNSTREAM RabX4 INTERGENIC
2L	802257	2L_802257_SNP [dm3] 2L_802257_SNP [dm6]	G	A	2.375e^-5	0.184	INTERGENIC
3L	473509	3L_473509_INS [dm3] 3L_473509_INS [dm6]	C	CTTTTC	2.384e^-5	0.184	INTRON klar
3L	14380645	3L_14380645_SNP [dm3] 3L_14387545_SNP [dm6]	G	A	2.402e^-5	0.184	INTERGENIC
3R	25462331	3R_25462331_SNP [dm3] 3R_29636609_SNP [dm6]	C	G	2.436e^-5	0.184	INTRON Dop1R2	TF binding site mE1_TFBS_chinmo
3R	20658780	3R_20658780_DEL [dm3] 3R_24833058_DEL [dm6]	TA	T	2.448e^-5	0.184	UPSTREAM sosie INTERGENIC
2L	3327217	2L_3327217_DEL [dm3] 2L_3327217_DEL [dm6]	CC	C	2.461e^-5	0.184	UPSTREAM CG33282 DOWNSTREAM CG33281 INTERGENIC
2L	2385313	2L_2385313_SNP [dm3] 2L_2385313_SNP [dm6]	T	C	2.467e^-5	0.184	NON_SYNONYMOUS_CODING CG3557 DOWNSTREAM CG9870
3R	20667801	3R_20667801_SNP [dm3] 3R_24842079_SNP [dm6]	T	C	2.476e^-5	0.184	UTR_5_PRIME Esp UPSTREAM CG33658
3R	25210358	3R_25210358_SNP [dm3] 3R_29384636_SNP [dm6]	T	C	2.485e^-5	0.184	INTRON Ptp99A
2L	7153675	2L_7153675_SNP [dm3] 2L_7153675_SNP [dm6]	G	A	2.488e^-5	0.184	INTRON Pvf3
3L	15785290	3L_15785290_SNP [dm3] 3L_15792190_SNP [dm6]	G	A	2.492e^-5	0.184	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	1602621	3L_1602621_SNP [dm3] 3L_1602621_SNP [dm6]	G	T	2.492e^-5	0.184	UTR_5_PRIME CG12104 UPSTREAM CG33791 & 2 others	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
2L	18044757	2L_18044757_DEL [dm3] 2L_18044757_DEL [dm6]	GGCCCTG	G	2.497e^-5	0.184	INTRON rdo
3R	17319504	3R_17319504_SNP [dm3] 3R_21493782_SNP [dm6]	C	A	2.499e^-5	0.184	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	21933009	2L_21933009_DEL [dm3] 2L_21933009_DEL [dm6]	CC	C	2.510e^-5	0.184	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	12282953	2L_12282953_DEL [dm3] 2L_12282953_DEL [dm6]	TATAA	T	2.520e^-5	0.184	INTRON aret
3R	23238977	3R_23238977_SNP [dm3] 3R_27413255_SNP [dm6]	T	C	2.538e^-5	0.184	INTRON side
2L	4824350	2L_4824350_SNP [dm3] 2L_4824350_SNP [dm6]	T	A	2.553e^-5	0.185	INTRON CG15628	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	15169853	3R_15169853_SNP [dm3] 3R_19344131_SNP [dm6]	G	T	2.566e^-5	0.185	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
2L	5205348	2L_5205348_SNP [dm3] 2L_5205348_SNP [dm6]	A	G	2.583e^-5	0.185	UTR_3_PRIME Msp300 UPSTREAM snmRNA:158
2L	2074478	2L_2074478_SNP [dm3] 2L_2074478_SNP [dm6]	C	A	2.592e^-5	0.185	INTRON dpr3
2L	6765722	2L_6765722_SNP [dm3] 2L_6765722_SNP [dm6]	C	T	2.595e^-5	0.185	SYNONYMOUS_CODING CG11321	TF binding site mE1_TFBS_cad
3L	11652581	3L_11652581_SNP [dm3] 3L_11659481_SNP [dm6]	G	A	2.604e^-5	0.185	INTRON CG32085
3R	25219002	3R_25219002_DEL [dm3] 3R_29393280_DEL [dm6]	GATTTTCGCA	G	2.621e^-5	0.185	INTRON Ptp99A
2R	12367468	2R_12367468_INS [dm3] 2R_16479963_INS [dm6]	C	CA	2.624e^-5	0.185	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15512379	3R_15512379_INS [dm3] 3R_19686657_INS [dm6]	A	AA	2.649e^-5	0.186	UPSTREAM Naam INTRON Naam
3R	20658785	3R_20658785_DEL [dm3] 3R_24833063_DEL [dm6]	AATGAAATGCGGCTA...	C	2.692e^-5	0.188	UPSTREAM sosie INTERGENIC
3R	20647768	3R_20647768_SNP [dm3] 3R_24822046_SNP [dm6]	C	T	2.709e^-5	0.188	SYNONYMOUS_CODING Saf-B UTR_3_PRIME Saf-B DOWNSTREAM niki	TF binding site mE1_TFBS_cad
2L	2443969	2L_2443969_SNP [dm3] 2L_2443969_SNP [dm6]	T	C	2.713e^-5	0.188	INTRON dpp	enhancer FlyBase regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
2L	17597830	2L_17597830_DEL [dm3] 2L_17597830_DEL [dm6]	TAT	A	2.728e^-5	0.188	INTRON Sytalpha
3R	26707108	3R_26707108_SNP [dm3] 3R_30881386_SNP [dm6]	C	A	2.735e^-5	0.188	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA
2L	4691730	2L_4691730_SNP [dm3] 2L_4691730_SNP [dm6]	A	G	2.748e^-5	0.188	INTERGENIC
2L	13156998	2L_13156998_SNP [dm3] 2L_13156998_SNP [dm6]	A	C	2.757e^-5	0.188	INTERGENIC
3R	10628531	3R_10628531_SNP [dm3] 3R_14802809_SNP [dm6]	C	A	2.763e^-5	0.188	SYNONYMOUS_CODING CG14857
2L	5408027	2L_5408027_SNP [dm3] 2L_5408027_SNP [dm6]	A	T	2.769e^-5	0.188	INTRON H15	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	13643345	2L_13643345_SNP [dm3] 2L_13643345_SNP [dm6]	T	C	2.813e^-5	0.189	UPSTREAM ics DOWNSTREAM CR44726 INTERGENIC
3R	20475902	3R_20475902_SNP [dm3] 3R_24650180_SNP [dm6]	T	A	2.827e^-5	0.189	UTR_5_PRIME ash2 UPSTREAM puf & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
2R	18284264	2R_18284264_SNP [dm3] 2R_22396759_SNP [dm6]	A	G	2.839e^-5	0.189	INTRON babos	TF binding site BDTNP1_TFBS_dl
3L	19558376	3L_19558376_SNP [dm3] 3L_19565276_SNP [dm6]	A	G	2.881e^-5	0.189	DOWNSTREAM mir-9a INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_disco mE1_TFBS_HSA
3R	20647948	3R_20647948_SNP [dm3] 3R_24822226_SNP [dm6]	C	A	2.882e^-5	0.189	UTR_3_PRIME Saf-B DOWNSTREAM niki	TF binding site mE1_TFBS_cad
3R	20652359	3R_20652359_SNP [dm3] 3R_24826637_SNP [dm6]	A	C	2.883e^-5	0.189	UPSTREAM niki & 1 other DOWNSTREAM RabX4 INTERGENIC
2L	4859510	2L_4859510_SNP [dm3] 2L_4859510_SNP [dm6]	A	G	2.883e^-5	0.189	INTRON pog
2L	4684645	2L_4684645_SNP [dm3] 2L_4684645_SNP [dm6]	A	T	2.888e^-5	0.189	SYNONYMOUS_CODING CG11929 UPSTREAM Bsg25A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	7778770	2L_7778770_DEL [dm3] 2L_7778770_DEL [dm6]	ATGAGATTAA	GG	2.890e^-5	0.189	UPSTREAM CG7179 INTERGENIC
2L	2151509	2L_2151509_SNP [dm3] 2L_2151509_SNP [dm6]	T	A	2.891e^-5	0.189	UTR_3_PRIME CG7261 UPSTREAM AIF	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
X	3665405	X_3665405_INS [dm3] X_3771372_INS [dm6]	G	GG	2.931e^-5	0.189	INTRON tlk	TF binding site BDTNP1_TFBS_dl
2R	10484092	2R_10484092_DEL [dm3] 2R_14596587_DEL [dm6]	TG	T	2.956e^-5	0.189	DOWNSTREAM CG12869 INTRON RpI1	TF binding site mE1_TFBS_cad
2L	6708831	2L_6708831_SNP [dm3] 2L_6708831_SNP [dm6]	G	A	2.966e^-5	0.189	START_GAINED Tsp UTR_5_PRIME Tsp UPSTREAM Tsp INTRON Tsp	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	6565875	X_6565875_DEL [dm3] X_6671842_DEL [dm6]	TTGT	T	2.968e^-5	0.189	UTR_3_PRIME CG3198	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	26707073	3R_26707073_SNP [dm3] 3R_30881351_SNP [dm6]	T	C	2.969e^-5	0.189	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA
2L	19859344	2L_19859344_DEL [dm3] 2L_19859344_DEL [dm6]	TG	T	2.972e^-5	0.189	INTRON sick
2L	3731205	2L_3731205_DEL [dm3] 2L_3731205_DEL [dm6]	CTA	C	2.974e^-5	0.189	INTRON CG10019
2R	6175206	2R_6175206_INS [dm3] 2R_10287701_INS [dm6]	A	AA	2.983e^-5	0.189	UPSTREAM CAP INTRON CAP
2L	4719506	2L_4719506_SNP [dm3] 2L_4719506_SNP [dm6]	G	A	2.984e^-5	0.189	INTRON CG34351
2L	12552392	2L_12552392_SNP [dm3] 2L_12552392_SNP [dm6]	A	G	2.999e^-5	0.189	INTERGENIC
2L	12552394	2L_12552394_SNP [dm3] 2L_12552394_SNP [dm6]	A	T	2.999e^-5	0.189	INTERGENIC
3L	6650285	3L_6650285_INS [dm3] 3L_6657185_INS [dm6]	A	AA	3.005e^-5	0.189	INTERGENIC
2L	3634210	2L_3634210_SNP [dm3] 2L_3634210_SNP [dm6]	T	C	3.016e^-5	0.189	INTRON for	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_hkb mE1_TFBS_HSA
3L	11438052	3L_11438052_SNP [dm3] 3L_11444952_SNP [dm6]	A	C	3.031e^-5	0.189	UPSTREAM CG7557 EXON CR44549
2L	12267664	2L_12267664_SNP [dm3] 2L_12267664_SNP [dm6]	G	A	3.087e^-5	0.191	INTRON aret
X	9387528	X_9387528_DEL [dm3] X_9493495_DEL [dm6]	CC	C	3.098e^-5	0.191	INTRON mgl
3R	17321242	3R_17321242_SNP [dm3] 3R_21495520_SNP [dm6]	T	C	3.099e^-5	0.191	INTERGENIC
X	8720401	X_8720401_DEL [dm3] X_8826368_DEL [dm6]	TGGT	T	3.101e^-5	0.191	INTERGENIC
X	19592947	X_19592947_DEL [dm3] X_19698914_DEL [dm6]	CCA	TG	3.111e^-5	0.191	UTR_3_PRIME Cdc42 DOWNSTREAM CG14231	TF binding site BDTNP1_TFBS_dl
3L	11652526	3L_11652526_SNP [dm3] 3L_11659426_SNP [dm6]	C	T	3.115e^-5	0.191	INTRON CG32085
2L	3786894	2L_3786894_SNP [dm3] 2L_3786894_SNP [dm6]	C	T	3.128e^-5	0.191	UPSTREAM CG3921 DOWNSTREAM CG31958 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2R	20403002	2R_20403002_INS [dm3] 2R_24515479_INS [dm6]	A	ATGTATGTA	3.176e^-5	0.193	UPSTREAM Ir60b & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens
2L	3561785	2L_3561785_SNP [dm3] 2L_3561785_SNP [dm6]	T	A	3.193e^-5	0.194	UPSTREAM CR44309 INTERGENIC	TF binding site mE1_TFBS_HSA
2L	12294205	2L_12294205_SNP [dm3] 2L_12294205_SNP [dm6]	G	C	3.203e^-5	0.194	INTRON aret
2L	3580563	2L_3580563_SNP [dm3] 2L_3580563_SNP [dm6]	G	C	3.276e^-5	0.197	UTR_5_PRIME sob	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
2R	14477442	2R_14477442_INS [dm3] 2R_18589937_INS [dm6]	C	CT	3.281e^-5	0.197	INTRON GEFmeso
X	13582763	X_13582763_SNP [dm3] X_13688730_SNP [dm6]	C	T	3.290e^-5	0.197	INTRON CG9940	TF binding site BDTNP1_TFBS_twi
2L	17595876	2L_17595876_SNP [dm3] 2L_17595876_SNP [dm6]	C	G	3.304e^-5	0.197	INTRON Sytalpha
2L	12283044	2L_12283044_SNP [dm3] 2L_12283044_SNP [dm6]	A	T	3.308e^-5	0.197	INTRON aret
2L	989437	2L_989437_SNP [dm3] 2L_989437_SNP [dm6]	C	T	3.388e^-5	0.199	EXON CR44801	TF binding site mE1_TFBS_chinmo
3L	24116199	3L_24116199_DEL [dm3] 3L_24123099_DEL [dm6]	ATCCCGGCCGTT...	A	3.390e^-5	0.199	INTRON Snap25
3R	10628954	3R_10628954_SNP [dm3] 3R_14803232_SNP [dm6]	C	T	3.398e^-5	0.199	SPLICE_SITE_REGION CG14857 DOWNSTREAM btsz INTRON CG14857	TF binding site mE1_TFBS_cad
3L	5733948	3L_5733948_SNP [dm3] 3L_5740848_SNP [dm6]	C	G	3.408e^-5	0.199	SYNONYMOUS_CODING sif INTRON sif	TF binding site mE1_TFBS_chinmo
3R	26820751	3R_26820751_SNP [dm3] 3R_30995029_SNP [dm6]	C	A	3.409e^-5	0.199	INTRON 5-HT7
2L	18587275	2L_18587275_SNP [dm3] 2L_18587275_SNP [dm6]	T	G	3.415e^-5	0.199	INTRON Pde11
2R	15472699	2R_15472699_SNP [dm3] 2R_19585194_SNP [dm6]	G	T	3.425e^-5	0.199	INTRON sm
3L	1010701	3L_1010701_SNP [dm3] 3L_1010701_SNP [dm6]	T	G	3.453e^-5	0.2	INTRON trio
2L	3327230	2L_3327230_SNP [dm3] 2L_3327230_SNP [dm6]	G	T	3.456e^-5	0.2	UPSTREAM CG33282 DOWNSTREAM CG33281 INTERGENIC
X	2458133	X_2458133_SNP [dm3] X_2564100_SNP [dm6]	T	C	3.486e^-5	0.201	INTRON Pdfr	TF binding site mE1_TFBS_inv
X	13583077	X_13583077_SNP [dm3] X_13689044_SNP [dm6]	G	A	3.513e^-5	0.201	INTRON CG9940
2L	12428135	2L_12428135_SNP [dm3] 2L_12428135_SNP [dm6]	G	C	3.533e^-5	0.201	SPLICE_SITE_REGION CG6388 UPSTREAM CG5446 INTRON CG6388	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2R	1329977	2R_1329977_SNP [dm3] 2R_5442472_SNP [dm6]	T	A	3.539e^-5	0.201	INTRON laccase2	transposable element FlyBase
3R	20636014	3R_20636014_SNP [dm3] 3R_24810292_SNP [dm6]	C	G	3.546e^-5	0.201	INTRON CG5807	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2L	4835291	2L_4835291_SNP [dm3] 2L_4835291_SNP [dm6]	G	A	3.550e^-5	0.201	UTR_5_PRIME Ir25a UPSTREAM Ir25a DOWNSTREAM tank
3R	13170076	3R_13170076_SNP [dm3] 3R_17344354_SNP [dm6]	T	A	3.550e^-5	0.201	INTRON beat-IIa
3R	27166311	3R_27166311_SNP [dm3] 3R_31340589_SNP [dm6]	T	A	3.580e^-5	0.202	SPLICE_SITE_REGION CG34347 INTRON CG34347
2L	20924052	2L_20924052_SNP [dm3] 2L_20924052_SNP [dm6]	T	C	3.604e^-5	0.203	DOWNSTREAM RPA2 EXON CR33318
2L	9940631	2L_9940631_SNP [dm3] 2L_9940631_SNP [dm6]	A	G	3.638e^-5	0.204	SPLICE_SITE_REGION CG4619 SYNONYMOUS_CODING CG4619 DOWNSTREAM CG5853
3R	26710866	3R_26710866_SNP [dm3] 3R_30885144_SNP [dm6]	G	C	3.652e^-5	0.204	SYNONYMOUS_CODING Sap-r	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	4819792	2L_4819792_SNP [dm3] 2L_4819792_SNP [dm6]	G	A	3.657e^-5	0.204	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3R	24664576	3R_24664576_SNP [dm3] 3R_28838854_SNP [dm6]	C	T	3.666e^-5	0.204	SYNONYMOUS_CODING Apc	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	3531243	2L_3531243_SNP [dm3] 2L_3531243_SNP [dm6]	T	A	3.698e^-5	0.205	UPSTREAM Spindly INTRON Che-13
3L	5173120	3L_5173120_SNP [dm3] 3L_5180020_SNP [dm6]	A	G	3.722e^-5	0.205	INTRON shep
3L	15785053	3L_15785053_SNP [dm3] 3L_15791953_SNP [dm6]	A	C	3.783e^-5	0.205	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	13157066	2L_13157066_SNP [dm3] 2L_13157066_SNP [dm6]	A	C	3.788e^-5	0.205	INTERGENIC
3R	20475906	3R_20475906_SNP [dm3] 3R_24650184_SNP [dm6]	A	T	3.794e^-5	0.205	UTR_5_PRIME ash2 UPSTREAM puf & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
2L	12280872	2L_12280872_SNP [dm3] 2L_12280872_SNP [dm6]	C	T	3.805e^-5	0.205	INTRON aret	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	15450921	3R_15450921_SNP [dm3] 3R_19625199_SNP [dm6]	T	G	3.810e^-5	0.205	UPSTREAM CG6231 INTRON CG6231
2L	4826539	2L_4826539_SNP [dm3] 2L_4826539_SNP [dm6]	C	G	3.817e^-5	0.205	SYNONYMOUS_CODING CG15628	TF binding site mE1_TFBS_cad
3R	25605188	3R_25605188_SNP [dm3] 3R_29779466_SNP [dm6]	C	T	3.834e^-5	0.205	SYNONYMOUS_CODING fig INTRON kay	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	16997405	3R_16997405_SNP [dm3] 3R_21171683_SNP [dm6]	A	T	3.837e^-5	0.205	INTRON SNF4Agamma
2L	4619454	2L_4619454_SNP [dm3] 2L_4619454_SNP [dm6]	G	T	3.865e^-5	0.205	UPSTREAM CR44609 INTERGENIC
2L	2904372	2L_2904372_SNP [dm3] 2L_2904372_SNP [dm6]	A	C	3.866e^-5	0.205	INTRON lilli
2L	12250720	2L_12250720_SNP [dm3] 2L_12250720_SNP [dm6]	G	C	3.896e^-5	0.205	INTRON aret
2L	12250755	2L_12250755_SNP [dm3] 2L_12250755_SNP [dm6]	T	G	3.912e^-5	0.205	INTRON aret
2L	3440924	2L_3440924_SNP [dm3] 2L_3440924_SNP [dm6]	T	G	3.912e^-5	0.205	INTERGENIC
2L	4873733	2L_4873733_SNP [dm3] 2L_4873733_SNP [dm6]	A	G	3.926e^-5	0.205	UTR_3_PRIME pog INTRON pog
2R	18524741	2R_18524741_INS [dm3] 2R_22637236_INS [dm6]	T	TAT	3.943e^-5	0.205	UPSTREAM bonsai INTRON Cdk9	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	18389087	2L_18389087_DEL [dm3] 2L_18389087_DEL [dm6]	AAGACTTAAAGCTGATGTGT...	A	3.962e^-5	0.205	UTR_3_PRIME Fas3 INTRON Fas3
3R	20475899	3R_20475899_SNP [dm3] 3R_24650177_SNP [dm6]	C	G	3.972e^-5	0.205	UTR_5_PRIME ash2 UPSTREAM puf	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
3R	22047559	3R_22047559_SNP [dm3] 3R_26221837_SNP [dm6]	A	C	3.986e^-5	0.205	INTERGENIC
3R	19750711	3R_19750711_INS [dm3] 3R_23924989_INS [dm6]	C	CC	3.986e^-5	0.205	DOWNSTREAM CG31141 INTRON Ndc1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2L	4827023	2L_4827023_SNP [dm3] 2L_4827023_SNP [dm6]	G	A	4.000e^-5	0.205	SYNONYMOUS_CODING CG15628	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	13583088	X_13583088_SNP [dm3] X_13689055_SNP [dm6]	T	C	4.000e^-5	0.205	INTRON CG9940
X	20356166	X_20356166_DEL [dm3] X_20485139_DEL [dm6]	TT	T	4.001e^-5	0.205	INTRON RhoGAP19D
3L	12623403	3L_12623403_SNP [dm3] 3L_12630303_SNP [dm6]	A	G	4.003e^-5	0.205	INTRON CR32111
3L	2155820	3L_2155820_INS [dm3] 3L_2155820_INS [dm6]	A	AGGA	4.010e^-5	0.205	INTRON CG15822
3R	24667244	3R_24667244_SNP [dm3] 3R_28841522_SNP [dm6]	A	C	4.024e^-5	0.205	INTRON Apc	TF binding site BDTNP1_TFBS_twi
2L	5427420	2L_5427420_SNP [dm3] 2L_5427420_SNP [dm6]	T	C	4.042e^-5	0.205	INTERGENIC
2L	5942077	2L_5942077_DEL [dm3] 2L_5942077_DEL [dm6]	CCACACTCACCCACCAAAAC...	C	4.059e^-5	0.205	UPSTREAM CR45289 DOWNSTREAM Sfp26Ad EXON CR45289
2R	13163427	2R_13163427_SNP [dm3] 2R_17275922_SNP [dm6]	G	A	4.061e^-5	0.205	SYNONYMOUS_CODING mbl	TF binding site mE1_TFBS_HSA
3L	15056527	3L_15056527_INS [dm3] 3L_15063427_INS [dm6]	T	TCCTTGCT	4.092e^-5	0.205	UPSTREAM CR43684 INTRON Sytbeta
3L	14380650	3L_14380650_SNP [dm3] 3L_14387550_SNP [dm6]	G	A	4.096e^-5	0.205	INTERGENIC
3R	24681140	3R_24681140_SNP [dm3] 3R_28855418_SNP [dm6]	T	A	4.105e^-5	0.205	INTRON spg & 1 other
2L	3853378	2L_3853378_INS [dm3] 2L_3853378_INS [dm6]	G	GGAAT	4.105e^-5	0.205	DOWNSTREAM CR45451 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	1782654	2L_1782654_SNP [dm3] 2L_1782654_SNP [dm6]	G	A	4.109e^-5	0.205	INTERGENIC	regulatory region REDfly_CRMs
2L	6779685	2L_6779685_SNP [dm3] 2L_6779685_SNP [dm6]	C	G	4.110e^-5	0.205	INTRON nrv1
3R	20647759	3R_20647759_SNP [dm3] 3R_24822037_SNP [dm6]	C	T	4.112e^-5	0.205	SYNONYMOUS_CODING Saf-B UTR_3_PRIME Saf-B DOWNSTREAM niki	TF binding site mE1_TFBS_cad
2L	12275284	2L_12275284_INS [dm3] 2L_12275284_INS [dm6]	A	AAAA	4.124e^-5	0.205	INTRON aret
2R	20367528	2R_20367528_DEL [dm3] 2R_24480005_DEL [dm6]	TCTCTCATCT	T	4.132e^-5	0.205	INTRON CG13579
2R	18034872	2R_18034872_SNP [dm3] 2R_22147367_SNP [dm6]	A	G	4.139e^-5	0.205	INTRON a	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	2095032	3R_2095032_SNP [dm3] 3R_6269310_SNP [dm6]	T	G	4.151e^-5	0.205	UPSTREAM Osi11 INTERGENIC
2L	2804823	2L_2804823_SNP [dm3] 2L_2804823_SNP [dm6]	C	T	4.163e^-5	0.205	UPSTREAM daw INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	20667879	3R_20667879_DEL [dm3] 3R_24842157_DEL [dm6]	GTGCATTTCGGCAGTGATTT...	G	4.206e^-5	0.205	UTR_5_PRIME Esp UPSTREAM CG33658
2L	5194734	2L_5194734_SNP [dm3] 2L_5194734_SNP [dm6]	A	G	4.208e^-5	0.205	SYNONYMOUS_CODING Msp300	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	2869563	2L_2869563_DEL [dm3] 2L_2869563_DEL [dm6]	AA	G	4.208e^-5	0.205	UPSTREAM CG8813 INTRON CG31694	TF binding site mE1_TFBS_cad
3R	20654318	3R_20654318_SNP [dm3] 3R_24828596_SNP [dm6]	T	C	4.214e^-5	0.205	UTR_3_PRIME CG31357 UPSTREAM RabX4	TF binding site mE1_TFBS_chinmo
2R	20378584	2R_20378584_DEL [dm3] 2R_24491061_DEL [dm6]	TT	T	4.215e^-5	0.205	DOWNSTREAM CG13579 INTERGENIC
3R	20051147	3R_20051147_DEL [dm3] 3R_24225425_DEL [dm6]	GCTG	G	4.225e^-5	0.205	CODON_DELETION Spps	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	4682753	2L_4682753_SNP [dm3] 2L_4682753_SNP [dm6]	T	G	4.242e^-5	0.205	START_GAINED CG11929 UTR_5_PRIME CG11929 DOWNSTREAM Bsg25A
3R	16242189	3R_16242189_INS [dm3] 3R_20416467_INS [dm6]	C	CG	4.243e^-5	0.205	INTRON Gfrl
2L	4822366	2L_4822366_SNP [dm3] 2L_4822366_SNP [dm6]	T	C	4.269e^-5	0.205	UTR_5_PRIME CG15628	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
X	9165919	X_9165919_INS [dm3] X_9271886_INS [dm6]	G	GGGGTC	4.278e^-5	0.205	INTRON Cfp1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	19959009	X_19959009_SNP [dm3] X_20064976_SNP [dm6]	C	T	4.298e^-5	0.205	INTERGENIC
3R	20651556	3R_20651556_DEL [dm3] 3R_24825834_DEL [dm6]	TT	T	4.315e^-5	0.205	UTR_3_PRIME CG43166 UPSTREAM niki DOWNSTREAM RabX4
3L	3867643	3L_3867643_SNP [dm3] 3L_3867643_SNP [dm6]	G	C	4.323e^-5	0.205	INTERGENIC
2L	801843	2L_801843_SNP [dm3] 2L_801843_SNP [dm6]	G	T	4.327e^-5	0.205	INTERGENIC
2L	4683467	2L_4683467_SNP [dm3] 2L_4683467_SNP [dm6]	G	C	4.328e^-5	0.205	SYNONYMOUS_CODING Bsg25A INTRON CG11929	TF binding site BDTNP1_TFBS_dl
3R	14974159	3R_14974159_SNP [dm3] 3R_19148437_SNP [dm6]	G	A	4.333e^-5	0.205	UPSTREAM Ppcs & 1 other DOWNSTREAM CG5835 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Ubx
2L	12265022	2L_12265022_SNP [dm3] 2L_12265022_SNP [dm6]	T	G	4.343e^-5	0.205	INTRON aret
3R	20651430	3R_20651430_SNP [dm3] 3R_24825708_SNP [dm6]	G	T	4.344e^-5	0.205	UPSTREAM niki DOWNSTREAM CG43166 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad
2R	6820701	2R_6820701_DEL [dm3] 2R_10933196_DEL [dm6]	ACGAA	A	4.353e^-5	0.205	INTERGENIC
2L	4742706	2L_4742706_SNP [dm3] 2L_4742706_SNP [dm6]	G	A	4.368e^-5	0.205	INTRON CG15630
2L	12279600	2L_12279600_DEL [dm3] 2L_12279600_DEL [dm6]	GCCTCG	G	4.383e^-5	0.206	INTRON aret
3R	20651424	3R_20651424_SNP [dm3] 3R_24825702_SNP [dm6]	A	C	4.416e^-5	0.206	UPSTREAM niki DOWNSTREAM CG43166 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad
3R	26707039	3R_26707039_INS [dm3] 3R_30881317_INS [dm6]	A	AGA	4.425e^-5	0.206	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	26707048	3R_26707048_INS [dm3] 3R_30881326_INS [dm6]	A	ATAGT	4.425e^-5	0.206	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	6770471	2L_6770471_SNP [dm3] 2L_6770471_SNP [dm6]	A	G	4.452e^-5	0.207	SYNONYMOUS_CODING CG11321
3R	18471743	3R_18471743_SNP [dm3] 3R_22646021_SNP [dm6]	G	C	4.459e^-5	0.207	INTRON CG45058
2L	4694566	2L_4694566_SNP [dm3] 2L_4694566_SNP [dm6]	G	A	4.490e^-5	0.207	UPSTREAM CG34351 INTERGENIC
2R	11309942	2R_11309942_DEL [dm3] 2R_15422437_DEL [dm6]	TT	T	4.497e^-5	0.207	DOWNSTREAM CG30472 INTRON CG43729	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	3581409	2L_3581409_INS [dm3] 2L_3581409_INS [dm6]	T	TACTATTAATTAA...	4.504e^-5	0.207	UPSTREAM sob INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	26707044	3R_26707044_INS [dm3] 3R_30881322_INS [dm6]	A	ATTCCTTATC	4.507e^-5	0.207	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	4859501	2L_4859501_SNP [dm3] 2L_4859501_SNP [dm6]	C	T	4.543e^-5	0.208	INTRON pog
3R	25210868	3R_25210868_SNP [dm3] 3R_29385146_SNP [dm6]	T	A	4.556e^-5	0.208	INTRON Ptp99A
3R	20475919	3R_20475919_SNP [dm3] 3R_24650197_SNP [dm6]	C	G	4.584e^-5	0.208	UTR_5_PRIME ash2 UPSTREAM puf & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
2L	987180	2L_987180_SNP [dm3] 2L_987180_SNP [dm6]	A	T	4.586e^-5	0.208	DOWNSTREAM CR44801 INTERGENIC
2L	10646906	2L_10646906_SNP [dm3] 2L_10646906_SNP [dm6]	T	A	4.588e^-5	0.208	SYNONYMOUS_CODING CG17097	TF binding site mE1_TFBS_inv mE1_TFBS_run
2L	6461666	2L_6461666_INS [dm3] 2L_6461666_INS [dm6]	C	CATTGAGC	4.605e^-5	0.208	INTRON CG16947
X	3920530	X_3920530_DEL [dm3] X_4026497_DEL [dm6]	GAAG	G	4.628e^-5	0.209	INTERGENIC	TF binding site BDTNP1_TFBS_hb
2L	5152085	2L_5152085_DEL [dm3] 2L_5152085_DEL [dm6]	CAGCAAC	C	4.650e^-5	0.209	UTR_5_PRIME Msp300 INTRON Msp300	TF binding site mE1_TFBS_inv
2L	12309657	2L_12309657_SNP [dm3] 2L_12309657_SNP [dm6]	G	T	4.655e^-5	0.209	INTRON aret	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	16560477	3L_16560477_DEL [dm3] 3L_16567377_DEL [dm6]	GT	G	4.722e^-5	0.211	DOWNSTREAM CG43206 INTRON Mipp1
3L	13357109	3L_13357109_SNP [dm3] 3L_13364009_SNP [dm6]	T	G	4.734e^-5	0.211	INTERGENIC
2L	2958527	2L_2958527_SNP [dm3] 2L_2958527_SNP [dm6]	A	C	4.743e^-5	0.211	UPSTREAM Rbp9 INTRON Rbp9	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	15241503	3R_15241503_SNP [dm3] 3R_19415781_SNP [dm6]	T	C	4.746e^-5	0.211	UTR_5_PRIME CG31221
3R	13172195	3R_13172195_SNP [dm3] 3R_17346473_SNP [dm6]	C	T	4.776e^-5	0.211	UPSTREAM beat-IIa INTRON beat-IIa
2R	14264653	2R_14264653_DEL [dm3] 2R_18377148_DEL [dm6]	ACA	A	4.784e^-5	0.211	UPSTREAM CR42736 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	21441875	X_21441875_INS [dm3] X_21570848_INS [dm6]	C	CA	4.785e^-5	0.211	INTERGENIC
2L	1340247	2L_1340247_INS [dm3] 2L_1340247_INS [dm6]	C	CC	4.798e^-5	0.211	INTERGENIC
X	17481255	X_17481255_DEL [dm3] X_17587222_DEL [dm6]	TACAT	T	4.829e^-5	0.212	INTRON CG12991
2L	5205344	2L_5205344_SNP [dm3] 2L_5205344_SNP [dm6]	G	T	4.837e^-5	0.212	SYNONYMOUS_CODING Msp300 UPSTREAM snmRNA:158
2L	8125112	2L_8125112_SNP [dm3] 2L_8125112_SNP [dm6]	G	A	4.838e^-5	0.212	SYNONYMOUS_CODING CG8673 DOWNSTREAM CG12375	TF binding site mE1_TFBS_sens
2L	20855019	2L_20855019_SNP [dm3] 2L_20855019_SNP [dm6]	A	G	4.860e^-5	0.212	INTRON twit
3R	23923437	3R_23923437_DEL [dm3] 3R_28097715_DEL [dm6]	AGTGCAGTCGAGTGGCACAG...	TGAGTGCAGTCG...	4.869e^-5	0.212	INTERGENIC
2L	4819643	2L_4819643_SNP [dm3] 2L_4819643_SNP [dm6]	G	A	4.895e^-5	0.212	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	20662298	3R_20662298_DEL [dm3] 3R_24836576_DEL [dm6]	GTGGCAGGTGGGAG...	G	4.898e^-5	0.212	UPSTREAM sosie DOWNSTREAM CR45216 INTRON sosie
2L	4830538	2L_4830538_SNP [dm3] 2L_4830538_SNP [dm6]	C	T	4.960e^-5	0.214	NON_SYNONYMOUS_CODING CG2976 UPSTREAM mir-4912 DOWNSTREAM Ir25a	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA
2L	1998802	2L_1998802_SNP [dm3] 2L_1998802_SNP [dm6]	A	G	4.962e^-5	0.214	INTRON CG33543
2L	18005567	2L_18005567_DEL [dm3] 2L_18005567_DEL [dm6]	CC	C	4.963e^-5	0.214	INTERGENIC
2L	11144098	2L_11144098_DEL [dm3] 2L_11144098_DEL [dm6]	TGATACAGGAGT...	T	4.982e^-5	0.214	DOWNSTREAM CG31867 INTRON Gyc32E	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	6000299	X_6000299_DEL [dm3] X_6106266_DEL [dm6]	GG	G	5.028e^-5	0.215	UTR_3_PRIME Ca-alpha1T	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	3665462	X_3665462_SNP [dm3] X_3771429_SNP [dm6]	T	C	5.038e^-5	0.215	INTRON tlk
2L	6986001	2L_6986001_DEL [dm3] 2L_6986001_DEL [dm6]	TGTAT	T	5.041e^-5	0.215	INTRON uif EXON CR44326
2L	747896	2L_747896_SNP [dm3] 2L_747896_SNP [dm6]	G	C	5.088e^-5	0.216	INTERGENIC
2L	5195632	2L_5195632_SNP [dm3] 2L_5195632_SNP [dm6]	C	A	5.088e^-5	0.216	UPSTREAM snmRNA:128 INTRON Msp300	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	4110941	2L_4110941_SNP [dm3] 2L_4110941_SNP [dm6]	A	C	5.126e^-5	0.216	INTRON ed	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	5606514	2L_5606514_INS [dm3] 2L_5606514_INS [dm6]	A	ACAA	5.140e^-5	0.216	INTRON CG14010
2L	12209977	2L_12209977_SNP [dm3] 2L_12209977_SNP [dm6]	G	C	5.155e^-5	0.216	UTR_3_PRIME CG31759 INTRON aret
3R	26707052	3R_26707052_SNP [dm3] 3R_30881330_SNP [dm6]	A	T	5.164e^-5	0.216	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	25219015	3R_25219015_SNP [dm3] 3R_29393293_SNP [dm6]	A	G	5.175e^-5	0.216	INTRON Ptp99A
2L	17595883	2L_17595883_SNP [dm3] 2L_17595883_SNP [dm6]	C	T	5.187e^-5	0.216	INTRON Sytalpha
2L	13753184	2L_13753184_DEL [dm3] 2L_13753184_DEL [dm6]	GAGG	G	5.188e^-5	0.216	INTRON CR44846 & 1 other
X	17636382	X_17636382_INS [dm3] X_17742349_INS [dm6]	C	CCTTGATTCTGC...	5.195e^-5	0.216	INTRON CG42684	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_Trl
2L	2822837	2L_2822837_DEL [dm3] 2L_2822837_DEL [dm6]	TGAGT	T	5.200e^-5	0.216	DOWNSTREAM CG3123 INTRON Duox
3L	11652607	3L_11652607_SNP [dm3] 3L_11659507_SNP [dm6]	C	G	5.221e^-5	0.216	INTRON CG32085
3L	6293702	3L_6293702_SNP [dm3] 3L_6300602_SNP [dm6]	T	G	5.223e^-5	0.216	INTERGENIC	TF binding site mE1_TFBS_HSA
2R	9556409	2R_9556409_INS [dm3] 2R_13668904_INS [dm6]	G	GACCGGGAACCAGAAAACG...	5.245e^-5	0.216	CODON_INSERTION CG18368 INTRON fas	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
3R	9766846	3R_9766846_SNP [dm3] 3R_13941124_SNP [dm6]	C	T	5.246e^-5	0.216	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
2L	9926564	2L_9926564_SNP [dm3] 2L_9926564_SNP [dm6]	C	T	5.311e^-5	0.218	SPLICE_SITE_REGION CG42366 INTRON CG42366	TF binding site mE1_TFBS_cad
3R	21456553	3R_21456553_SNP [dm3] 3R_25630831_SNP [dm6]	A	G	5.330e^-5	0.219	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	18296977	3R_18296977_SNP [dm3] 3R_22471255_SNP [dm6]	C	T	5.339e^-5	0.219	SYNONYMOUS_CODING Nrx-1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	3817308	3L_3817308_SNP [dm3] 3L_3817308_SNP [dm6]	G	C	5.405e^-5	0.219	UPSTREAM Acp63F INTRON Scsalpha
2L	14179074	2L_14179074_SNP [dm3] 2L_14179074_SNP [dm6]	T	C	5.437e^-5	0.219	INTRON CG43333
2L	18580089	2L_18580089_SNP [dm3] 2L_18580089_SNP [dm6]	C	T	5.455e^-5	0.219	INTRON Pde11
2L	7777848	2L_7777848_SNP [dm3] 2L_7777848_SNP [dm6]	G	A	5.462e^-5	0.219	SYNONYMOUS_CODING CG7179	TF binding site mE1_TFBS_cad
X	2458002	X_2458002_SNP [dm3] X_2563969_SNP [dm6]	G	A	5.466e^-5	0.219	INTRON Pdfr	TF binding site mE1_TFBS_inv
3R	20651381	3R_20651381_DEL [dm3] 3R_24825659_DEL [dm6]	GTTAATTTCTGAGTTTCAAG...	G	5.467e^-5	0.219	UPSTREAM niki DOWNSTREAM CG43166 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad
2L	4826194	2L_4826194_SNP [dm3] 2L_4826194_SNP [dm6]	C	G	5.473e^-5	0.219	INTRON CG15628
2L	4690721	2L_4690721_SNP [dm3] 2L_4690721_SNP [dm6]	T	C	5.513e^-5	0.219	UPSTREAM CG3251 INTERGENIC
3R	20651839	3R_20651839_SNP [dm3] 3R_24826117_SNP [dm6]	C	T	5.520e^-5	0.219	UPSTREAM niki DOWNSTREAM RabX4 INTRON CG43166	transposable element FlyBase
2L	13157221	2L_13157221_SNP [dm3] 2L_13157221_SNP [dm6]	G	C	5.537e^-5	0.219	INTERGENIC
2L	802093	2L_802093_SNP [dm3] 2L_802093_SNP [dm6]	G	A	5.551e^-5	0.219	INTERGENIC
3R	20475903	3R_20475903_SNP [dm3] 3R_24650181_SNP [dm6]	A	G	5.552e^-5	0.219	START_GAINED ash2 UTR_5_PRIME ash2 UPSTREAM puf & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
2L	5195268	2L_5195268_SNP [dm3] 2L_5195268_SNP [dm6]	C	T	5.553e^-5	0.219	SYNONYMOUS_CODING Msp300 UPSTREAM snmRNA:128	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	25744907	3R_25744907_SNP [dm3] 3R_29919185_SNP [dm6]	C	T	5.555e^-5	0.219	INTRON trp
X	3658906	X_3658906_DEL [dm3] X_3764873_DEL [dm6]	AAATTT	A	5.594e^-5	0.219	INTRON tlk
2L	2998970	2L_2998970_SNP [dm3] 2L_2998970_SNP [dm6]	G	T	5.599e^-5	0.219	UPSTREAM CG17265 DOWNSTREAM CG3558 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_GATAe mE1_TFBS_h
2L	4620622	2L_4620622_SNP [dm3] 2L_4620622_SNP [dm6]	T	A	5.602e^-5	0.219	EXON CR44609
2L	13956401	2L_13956401_SNP [dm3] 2L_13956401_SNP [dm6]	G	A	5.603e^-5	0.219	DOWNSTREAM Ance-3 INTERGENIC
3R	13166355	3R_13166355_SNP [dm3] 3R_17340633_SNP [dm6]	A	T	5.608e^-5	0.219	INTRON beat-IIa
X	14507334	X_14507334_DEL [dm3] X_14613301_DEL [dm6]	TT	G	5.611e^-5	0.219	INTRON NetA
2L	3501084	2L_3501084_DEL [dm3] 2L_3501084_DEL [dm6]	TTA	T	5.617e^-5	0.219	UTR_3_PRIME tim INTRON tim
2L	3786896	2L_3786896_SNP [dm3] 2L_3786896_SNP [dm6]	C	G	5.617e^-5	0.219	UPSTREAM CG3921 DOWNSTREAM CG31958 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3R	26850855	3R_26850855_DEL [dm3] 3R_31025133_DEL [dm6]	CC	C	5.675e^-5	0.22	INTERGENIC
3R	20651572	3R_20651572_SNP [dm3] 3R_24825850_SNP [dm6]	C	A	5.697e^-5	0.22	UTR_3_PRIME CG43166 UPSTREAM niki DOWNSTREAM RabX4
3R	2094973	3R_2094973_SNP [dm3] 3R_6269251_SNP [dm6]	A	G	5.703e^-5	0.22	UPSTREAM Osi11 INTERGENIC
2L	5561911	2L_5561911_DEL [dm3] 2L_5561911_DEL [dm6]	ATACTTTAAGA...	A	5.705e^-5	0.22	INTRON GluRIIB
3R	20651559	3R_20651559_SNP [dm3] 3R_24825837_SNP [dm6]	G	T	5.722e^-5	0.22	UTR_3_PRIME CG43166 UPSTREAM niki DOWNSTREAM RabX4
3R	16112953	3R_16112953_SNP [dm3] 3R_20287231_SNP [dm6]	C	A	5.736e^-5	0.22	INTRON cic	TF binding site BDTNP1_TFBS_twi
X	2458153	X_2458153_SNP [dm3] X_2564120_SNP [dm6]	T	C	5.745e^-5	0.22	INTRON Pdfr
2L	20125599	2L_20125599_DEL [dm3] 2L_20125599_DEL [dm6]	TC	T	5.750e^-5	0.22	INTERGENIC
2L	8610422	2L_8610422_SNP [dm3] 2L_8610422_SNP [dm6]	A	T	5.773e^-5	0.22	INTRON Sema-1a
2L	19766271	2L_19766271_SNP [dm3] 2L_19766271_SNP [dm6]	T	A	5.796e^-5	0.22	UTR_3_PRIME bsh DOWNSTREAM bsh
X	3752707	X_3752707_DEL [dm3] X_3858674_DEL [dm6]	AA	A	5.805e^-5	0.22	DOWNSTREAM roX1 EXON roX1
X	16679166	X_16679166_DEL [dm3] X_16785133_DEL [dm6]	AGGA	A	5.813e^-5	0.22	UTR_3_PRIME CG9609 DOWNSTREAM mRpL22
2L	4687043	2L_4687043_SNP [dm3] 2L_4687043_SNP [dm6]	A	T	5.850e^-5	0.22	NON_SYNONYMOUS_CODING CG11929 UPSTREAM Elba3	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	14380597	3L_14380597_SNP [dm3] 3L_14387497_SNP [dm6]	A	C	5.858e^-5	0.22	INTERGENIC
2L	3714629	2L_3714629_SNP [dm3] 2L_3714629_SNP [dm6]	G	T	5.865e^-5	0.22	INTRON CG2818	TF binding site mE1_TFBS_sens
3R	25744932	3R_25744932_SNP [dm3] 3R_29919210_SNP [dm6]	G	T	5.906e^-5	0.22	INTRON trp
2L	21944642	2L_21944642_INS [dm3] 2L_21944642_INS [dm6]	C	CTTAAGCT	5.919e^-5	0.22	INTERGENIC
2L	21944643	2L_21944643_DEL [dm3] 2L_21944643_DEL [dm6]	AC	A	5.919e^-5	0.22	INTERGENIC
2L	3731213	2L_3731213_DEL [dm3] 2L_3731213_DEL [dm6]	ATCT	G	5.924e^-5	0.22	INTRON CG10019
3R	25333142	3R_25333142_SNP [dm3] 3R_29507420_SNP [dm6]	G	T	5.925e^-5	0.22	INTERGENIC
2L	5194167	2L_5194167_SNP [dm3] 2L_5194167_SNP [dm6]	C	T	5.930e^-5	0.22	SYNONYMOUS_CODING Msp300 DOWNSTREAM snmRNA:765	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	706978	2L_706978_SNP [dm3] 2L_706978_SNP [dm6]	T	C	5.934e^-5	0.22	SYNONYMOUS_CODING ds	TF binding site mE1_TFBS_HSA
3L	9726774	3L_9726774_SNP [dm3] 3L_9733674_SNP [dm6]	A	G	5.950e^-5	0.22	SYNONYMOUS_CODING CG6749 DOWNSTREAM mir-4986 & 1 other EXON mir-4986
3R	20476322	3R_20476322_SNP [dm3] 3R_24650600_SNP [dm6]	A	T	5.967e^-5	0.22	UPSTREAM puf & 1 other INTRON ash2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
2L	3218525	2L_3218525_SNP [dm3] 2L_3218525_SNP [dm6]	A	C	5.970e^-5	0.22	INTERGENIC
3R	385292	3R_385292_INS [dm3] 3R_4559570_INS [dm6]	C	CGTATGTATATAC...	5.973e^-5	0.22	INTERGENIC
3R	12569684	3R_12569684_SNP [dm3] 3R_16743962_SNP [dm6]	T	C	5.986e^-5	0.22	INTRON bxd EXON bxd	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3R	18471548	3R_18471548_SNP [dm3] 3R_22645826_SNP [dm6]	A	G	5.988e^-5	0.22	INTRON CG45058
2L	4712976	2L_4712976_INS [dm3] 2L_4712976_INS [dm6]	G	CA	5.991e^-5	0.22	INTRON CG34351
2L	5473046	2L_5473046_SNP [dm3] 2L_5473046_SNP [dm6]	A	C	5.998e^-5	0.22	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_twi mE1_TFBS_cad
2L	5204649	2L_5204649_SNP [dm3] 2L_5204649_SNP [dm6]	C	A	5.999e^-5	0.22	INTRON Msp300
2L	4685767	2L_4685767_DEL [dm3] 2L_4685767_DEL [dm6]	TGGAAGTTCTAGCAAAGAC...	T	6.015e^-5	0.22	CODON_DELETION CG11929
2L	7777863	2L_7777863_SNP [dm3] 2L_7777863_SNP [dm6]	G	T	6.022e^-5	0.22	SYNONYMOUS_CODING CG7179	TF binding site mE1_TFBS_cad
3R	24667230	3R_24667230_SNP [dm3] 3R_28841508_SNP [dm6]	G	T	6.025e^-5	0.22	INTRON Apc	TF binding site BDTNP1_TFBS_twi
3R	26709682	3R_26709682_SNP [dm3] 3R_30883960_SNP [dm6]	T	A	6.029e^-5	0.22	UPSTREAM CG15547 INTRON Sap-r	TF binding site mE1_TFBS_cad
3R	8768435	3R_8768435_SNP [dm3] 3R_12942713_SNP [dm6]	A	G	6.039e^-5	0.22	INTERGENIC
2L	13115254	2L_13115254_SNP [dm3] 2L_13115254_SNP [dm6]	G	A	6.072e^-5	0.22	INTERGENIC
3R	16242192	3R_16242192_SNP [dm3] 3R_20416470_SNP [dm6]	C	G	6.077e^-5	0.22	INTRON Gfrl
2L	5105831	2L_5105831_SNP [dm3] 2L_5105831_SNP [dm6]	A	C	6.082e^-5	0.22	INTRON Msp300
3R	25462394	3R_25462394_SNP [dm3] 3R_29636672_SNP [dm6]	C	T	6.107e^-5	0.22	INTRON Dop1R2	TF binding site mE1_TFBS_chinmo
X	2214175	X_2214175_INS [dm3] X_2320142_INS [dm6]	G	GCTGAG	6.141e^-5	0.221	INTRON phl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	13170417	3R_13170417_SNP [dm3] 3R_17344695_SNP [dm6]	A	G	6.166e^-5	0.221	INTRON beat-IIa
2L	8886750	2L_8886750_SNP [dm3] 2L_8886750_SNP [dm6]	G	T	6.173e^-5	0.221	DOWNSTREAM CR44415 INTERGENIC	TF binding site mE1_TFBS_cnc
X	19556572	X_19556572_SNP [dm3] X_19662539_SNP [dm6]	T	C	6.183e^-5	0.221	UPSTREAM CG14223 INTRON CG14223	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	7293956	X_7293956_DEL [dm3] X_7399923_DEL [dm6]	TTTT	G	6.197e^-5	0.221	INTRON CG1677 & 1 other	TF binding site BDTNP1_TFBS_prd mE1_TFBS_sbb
2L	4715495	2L_4715495_SNP [dm3] 2L_4715495_SNP [dm6]	T	C	6.244e^-5	0.222	INTRON CG34351
3R	17827034	3R_17827034_SNP [dm3] 3R_22001312_SNP [dm6]	C	T	6.246e^-5	0.222	INTRON Eip93F	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sbb
2L	19718155	2L_19718155_SNP [dm3] 2L_19718155_SNP [dm6]	G	A	6.284e^-5	0.223	INTRON Lar	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	14522684	X_14522684_DEL [dm3] X_14628651_DEL [dm6]	CG	C	6.295e^-5	0.223	INTRON NetA	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
2L	4617231	2L_4617231_SNP [dm3] 2L_4617231_SNP [dm6]	T	C	6.297e^-5	0.223	INTERGENIC
3R	13174393	3R_13174393_SNP [dm3] 3R_17348671_SNP [dm6]	G	A	6.400e^-5	0.224	INTRON beat-IIa
2L	802025	2L_802025_SNP [dm3] 2L_802025_SNP [dm6]	G	A	6.400e^-5	0.224	INTERGENIC
2L	20760907	2L_20760907_SNP [dm3] 2L_20760907_SNP [dm6]	A	G	6.403e^-5	0.224	UTR_3_PRIME dia INTRON dia	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2L	3218520	2L_3218520_SNP [dm3] 2L_3218520_SNP [dm6]	C	T	6.411e^-5	0.224	INTERGENIC
3R	20635962	3R_20635962_SNP [dm3] 3R_24810240_SNP [dm6]	T	A	6.411e^-5	0.224	INTRON CG5807	TF binding site mE1_TFBS_HSA mE1_TFBS_kn
2L	3980074	2L_3980074_SNP [dm3] 2L_3980074_SNP [dm6]	A	C	6.414e^-5	0.224	INTRON fred
2L	8614393	2L_8614393_SNP [dm3] 2L_8614393_SNP [dm6]	A	G	6.424e^-5	0.224	INTRON Sema-1a
3R	26707100	3R_26707100_SNP [dm3] 3R_30881378_SNP [dm6]	A	T	6.461e^-5	0.225	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA
2L	17402102	2L_17402102_SNP [dm3] 2L_17402102_SNP [dm6]	A	T	6.461e^-5	0.225	DOWNSTREAM CLIP-190 INTRON CLIP-190
3R	25395959	3R_25395959_SNP [dm3] 3R_29570237_SNP [dm6]	T	A	6.484e^-5	0.225	INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	15723610	3R_15723610_SNP [dm3] 3R_19897888_SNP [dm6]	G	A	6.498e^-5	0.225	SYNONYMOUS_CODING CG4733 DOWNSTREAM CG4538 INTRON CG4538
3R	15450924	3R_15450924_SNP [dm3] 3R_19625202_SNP [dm6]	G	T	6.502e^-5	0.225	UPSTREAM CG6231 INTRON CG6231
2L	2902962	2L_2902962_SNP [dm3] 2L_2902962_SNP [dm6]	C	T	6.533e^-5	0.225	INTRON lilli	TF binding site mE1_TFBS_chinmo
2L	12301082	2L_12301082_SNP [dm3] 2L_12301082_SNP [dm6]	T	C	6.536e^-5	0.225	INTRON aret
2L	4670176	2L_4670176_SNP [dm3] 2L_4670176_SNP [dm6]	C	T	6.556e^-5	0.226	INTERGENIC
2L	2538445	2L_2538445_INS [dm3] 2L_2538445_INS [dm6]	T	TATATATCATCATCATAAAT...	6.601e^-5	0.226	INTERGENIC
2R	19460488	2R_19460488_SNP [dm3] 2R_23572965_SNP [dm6]	G	C	6.605e^-5	0.226	INTRON apt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_Trl
2L	4643241	2L_4643241_SNP [dm3] 2L_4643241_SNP [dm6]	T	C	6.645e^-5	0.227	SYNONYMOUS_CODING CG15635 DOWNSTREAM BG642163
2L	3015610	2L_3015610_SNP [dm3] 2L_3015610_SNP [dm6]	C	G	6.648e^-5	0.227	UTR_3_PRIME CG17265 DOWNSTREAM CG17224	TF binding site BDTNP1_TFBS_twi
X	21262377	X_21262377_DEL [dm3] X_21391350_DEL [dm6]	AAACAA	A	6.657e^-5	0.227	UTR_3_PRIME mst DOWNSTREAM mst
2L	4683680	2L_4683680_SNP [dm3] 2L_4683680_SNP [dm6]	G	A	6.696e^-5	0.228	SYNONYMOUS_CODING Bsg25A INTRON CG11929	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi
2L	4680197	2L_4680197_SNP [dm3] 2L_4680197_SNP [dm6]	G	A	6.735e^-5	0.228	INTERGENIC
2L	12280873	2L_12280873_SNP [dm3] 2L_12280873_SNP [dm6]	G	T	6.748e^-5	0.228	INTRON aret	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	8946704	3L_8946704_SNP [dm3] 3L_8953604_SNP [dm6]	A	T	6.751e^-5	0.228	UPSTREAM orb2 & 1 other INTRON orb2 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_ttk mE1_TFBS_Ubx
2L	19766353	2L_19766353_SNP [dm3] 2L_19766353_SNP [dm6]	G	A	6.754e^-5	0.228	UTR_3_PRIME bsh
3R	13167279	3R_13167279_SNP [dm3] 3R_17341557_SNP [dm6]	T	G	6.762e^-5	0.228	INTRON beat-IIa
2L	4855512	2L_4855512_SNP [dm3] 2L_4855512_SNP [dm6]	G	A	6.775e^-5	0.228	INTRON pog
2L	19002284	2L_19002284_SNP [dm3] 2L_19002284_SNP [dm6]	C	T	6.790e^-5	0.228	NON_SYNONYMOUS_CODING CG31792	TF binding site mE1_TFBS_cad
2R	9482143	2R_9482143_SNP [dm3] 2R_13594638_SNP [dm6]	C	T	6.799e^-5	0.228	SYNONYMOUS_CODING CG6197	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
X	10178371	X_10178371_SNP [dm3] X_10284338_SNP [dm6]	A	G	6.810e^-5	0.228	INTRON alpha-Man-I
2R	5143989	2R_5143989_SNP [dm3] 2R_9256484_SNP [dm6]	G	A	6.839e^-5	0.228	UPSTREAM Pkn INTRON Pkn
2L	3754890	2L_3754890_SNP [dm3] 2L_3754890_SNP [dm6]	G	T	6.842e^-5	0.228	DOWNSTREAM CG10019 INTERGENIC
2L	2781670	2L_2781670_DEL [dm3] 2L_2781670_DEL [dm6]	ACAATA	A	6.850e^-5	0.228	UTR_3_PRIME Syt1
2L	4820139	2L_4820139_SNP [dm3] 2L_4820139_SNP [dm6]	G	A	6.856e^-5	0.228	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	3772581	2L_3772581_SNP [dm3] 2L_3772581_SNP [dm6]	A	T	6.876e^-5	0.228	START_GAINED bowl UTR_5_PRIME bowl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3R	22792355	3R_22792355_SNP [dm3] 3R_26966633_SNP [dm6]	A	T	6.906e^-5	0.228	UPSTREAM CG5521 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4819844	2L_4819844_SNP [dm3] 2L_4819844_SNP [dm6]	C	T	6.915e^-5	0.228	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	4820137	2L_4820137_SNP [dm3] 2L_4820137_SNP [dm6]	A	G	6.915e^-5	0.228	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	12306660	2L_12306660_SNP [dm3] 2L_12306660_SNP [dm6]	A	C	6.921e^-5	0.228	INTRON aret
2L	8884973	2L_8884973_SNP [dm3] 2L_8884973_SNP [dm6]	G	A	6.926e^-5	0.228	INTERGENIC
X	2218340	X_2218340_SNP [dm3] X_2324307_SNP [dm6]	C	G	6.932e^-5	0.228	DOWNSTREAM CG14050 INTRON phl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	4829444	2L_4829444_SNP [dm3] 2L_4829444_SNP [dm6]	A	C	6.957e^-5	0.228	UTR_3_PRIME CG2976 DOWNSTREAM CG15628 & 1 other	TF binding site BDTNP1_TFBS_dl
3R	25609177	3R_25609177_SNP [dm3] 3R_29783455_SNP [dm6]	A	C	6.995e^-5	0.229	INTRON kay	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
2R	19460486	2R_19460486_SNP [dm3] 2R_23572963_SNP [dm6]	T	G	7.018e^-5	0.229	INTRON apt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_Trl
2L	2060585	2L_2060585_SNP [dm3] 2L_2060585_SNP [dm6]	C	T	7.022e^-5	0.229	INTRON dpr3
2L	2060588	2L_2060588_SNP [dm3] 2L_2060588_SNP [dm6]	A	T	7.022e^-5	0.229	INTRON dpr3
2L	787020	2L_787020_SNP [dm3] 2L_787020_SNP [dm6]	G	A	7.030e^-5	0.229	SYNONYMOUS_CODING Pkg21D UTR_3_PRIME CG3544 DOWNSTREAM CG3544	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	5194056	2L_5194056_SNP [dm3] 2L_5194056_SNP [dm6]	C	A	7.061e^-5	0.229	SYNONYMOUS_CODING Msp300 DOWNSTREAM snmRNA:765	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	12118684	2L_12118684_SNP [dm3] 2L_12118684_SNP [dm6]	T	G	7.064e^-5	0.229	INTRON CG17211	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	11652522	3L_11652522_SNP [dm3] 3L_11659422_SNP [dm6]	T	C	7.091e^-5	0.229	INTRON CG32085
3R	19124815	3R_19124815_SNP [dm3] 3R_23299093_SNP [dm6]	T	A	7.117e^-5	0.229	INTRON pnt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	4775620	2L_4775620_SNP [dm3] 2L_4775620_SNP [dm6]	T	C	7.118e^-5	0.229	INTRON CG15630
2L	4684253	2L_4684253_SNP [dm3] 2L_4684253_SNP [dm6]	T	C	7.120e^-5	0.229	SYNONYMOUS_CODING Bsg25A INTRON CG11929	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	3820504	2L_3820504_SNP [dm3] 2L_3820504_SNP [dm6]	T	C	7.180e^-5	0.231	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_sens
2L	4680286	2L_4680286_SNP [dm3] 2L_4680286_SNP [dm6]	T	G	7.208e^-5	0.231	INTERGENIC
2L	2003973	2L_2003973_INS [dm3] 2L_2003973_INS [dm6]	T	TT	7.226e^-5	0.231	DOWNSTREAM CR43464 INTRON CG33543
3L	16432848	3L_16432848_SNP [dm3] 3L_16439748_SNP [dm6]	C	T	7.234e^-5	0.231	INTRON CG33158 & 1 other
3R	23039631	3R_23039631_INS [dm3] 3R_27213909_INS [dm6]	T	TGTAT	7.271e^-5	0.232	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	848071	3R_848071_INS [dm3] 3R_5022349_INS [dm6]	T	TTT	7.291e^-5	0.232	DOWNSTREAM CR45585 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	16212900	2L_16212900_SNP [dm3] 2L_16212900_SNP [dm6]	G	A	7.306e^-5	0.232	SYNONYMOUS_CODING CG31819
3R	19465064	3R_19465064_SNP [dm3] 3R_23639342_SNP [dm6]	A	G	7.313e^-5	0.232	INTRON CG31145	TF binding site mE1_TFBS_inv
2L	4658252	2L_4658252_SNP [dm3] 2L_4658252_SNP [dm6]	C	G	7.388e^-5	0.234	INTERGENIC
2L	2017293	2L_2017293_INS [dm3] 2L_2017293_INS [dm6]	G	TTAAA	7.431e^-5	0.234	UPSTREAM CG4238 INTRON CG4238
3R	14971945	3R_14971945_SNP [dm3] 3R_19146223_SNP [dm6]	C	A	7.433e^-5	0.234	INTRON Ppcs
2L	12306645	2L_12306645_DEL [dm3] 2L_12306645_DEL [dm6]	TCTGTAGGATTGTG...	T	7.449e^-5	0.234	INTRON aret
2L	3962752	2L_3962752_SNP [dm3] 2L_3962752_SNP [dm6]	A	T	7.449e^-5	0.234	INTRON fred	TF binding site mE1_TFBS_bab1
3L	1012236	3L_1012236_SNP [dm3] 3L_1012236_SNP [dm6]	G	A	7.466e^-5	0.234	INTRON trio
2L	12200054	2L_12200054_SNP [dm3] 2L_12200054_SNP [dm6]	C	T	7.469e^-5	0.234	INTRON aret
3L	19563552	3L_19563552_SNP [dm3] 3L_19570452_SNP [dm6]	C	A	7.470e^-5	0.234	INTRON Shal	TF binding site mE1_TFBS_cad
3L	13211186	3L_13211186_SNP [dm3] 3L_13218086_SNP [dm6]	C	A	7.470e^-5	0.234	DOWNSTREAM CR45098 & 1 other INTERGENIC
2L	2056784	2L_2056784_SNP [dm3] 2L_2056784_SNP [dm6]	G	A	7.502e^-5	0.234	INTRON Or22c
2L	4120373	2L_4120373_SNP [dm3] 2L_4120373_SNP [dm6]	T	C	7.507e^-5	0.234	NON_SYNONYMOUS_CODING Sr-CIII
2L	5071179	2L_5071179_SNP [dm3] 2L_5071179_SNP [dm6]	T	C	7.545e^-5	0.234	UPSTREAM CR45305 DOWNSTREAM qtc & 1 other INTRON RpL37A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
3L	6494033	3L_6494033_SNP [dm3] 3L_6500933_SNP [dm6]	C	T	7.547e^-5	0.234	INTRON sfl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA
2L	4819797	2L_4819797_SNP [dm3] 2L_4819797_SNP [dm6]	C	T	7.554e^-5	0.234	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
2L	994688	2L_994688_SNP [dm3] 2L_994688_SNP [dm6]	G	T	7.555e^-5	0.234	INTERGENIC
2L	3786951	2L_3786951_SNP [dm3] 2L_3786951_SNP [dm6]	G	A	7.576e^-5	0.234	UPSTREAM CG3921 DOWNSTREAM CG31958 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
2L	2050123	2L_2050123_SNP [dm3] 2L_2050123_SNP [dm6]	G	T	7.643e^-5	0.235	INTERGENIC
2L	2385402	2L_2385402_SNP [dm3] 2L_2385402_SNP [dm6]	T	G	7.649e^-5	0.235	SYNONYMOUS_CODING CG3557 DOWNSTREAM CG9870
2L	12051967	2L_12051967_SNP [dm3] 2L_12051967_SNP [dm6]	C	T	7.654e^-5	0.235	UTR_3_PRIME CG14945 & 1 other
X	14923823	X_14923823_DEL [dm3] X_15029790_DEL [dm6]	CAC	C	7.714e^-5	0.237	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20651527	3R_20651527_SNP [dm3] 3R_24825805_SNP [dm6]	T	A	7.742e^-5	0.237	UTR_3_PRIME CG43166 UPSTREAM niki DOWNSTREAM RabX4
2L	6733163	2L_6733163_SNP [dm3] 2L_6733163_SNP [dm6]	A	G	7.748e^-5	0.237	UTR_5_PRIME TTLL3B DOWNSTREAM Liprin-alpha	TF binding site mE1_TFBS_cad
2L	12351161	2L_12351161_SNP [dm3] 2L_12351161_SNP [dm6]	C	T	7.767e^-5	0.237	INTRON bru-2
2L	5592780	2L_5592780_INS [dm3] 2L_5592780_INS [dm6]	C	CC	7.772e^-5	0.237	INTERGENIC
3L	975783	3L_975783_SNP [dm3] 3L_975783_SNP [dm6]	A	G	7.817e^-5	0.238	INTRON Glut1
3R	13799776	3R_13799776_INS [dm3] 3R_17974054_INS [dm6]	G	GAAAAGG	7.825e^-5	0.238	INTRON cpo
2L	7222939	2L_7222939_SNP [dm3] 2L_7222939_SNP [dm6]	T	C	7.838e^-5	0.238	SYNONYMOUS_CODING ico DOWNSTREAM Ndae1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3R	26707154	3R_26707154_SNP [dm3] 3R_30881432_SNP [dm6]	G	A	7.858e^-5	0.238	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC
2L	13108034	2L_13108034_SNP [dm3] 2L_13108034_SNP [dm6]	T	A	7.871e^-5	0.238	SYNONYMOUS_CODING CG5142	TF binding site mE1_TFBS_chinmo
2R	16762366	2R_16762366_SNP [dm3] 2R_20874861_SNP [dm6]	G	T	7.886e^-5	0.238	SYNONYMOUS_CODING Ipk1 INTRON Ipk1
3L	8947896	3L_8947896_DEL [dm3] 3L_8954796_DEL [dm6]	TACTTTTTATTTT...	T	7.890e^-5	0.238	UPSTREAM GNBP3 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Ubx
3L	22305087	3L_22305087_DEL [dm3] 3L_22311987_DEL [dm6]	TCAAC	CT	7.922e^-5	0.238	INTRON Ten-m
2L	12210943	2L_12210943_DEL [dm3] 2L_12210943_DEL [dm6]	TTGCTTTAGCTCCT...	T	7.925e^-5	0.238	DOWNSTREAM CG31759 INTRON aret
2L	2067129	2L_2067129_SNP [dm3] 2L_2067129_SNP [dm6]	T	A	7.953e^-5	0.239	NON_SYNONYMOUS_CODING dpr3
2L	7798440	2L_7798440_SNP [dm3] 2L_7798440_SNP [dm6]	C	T	7.977e^-5	0.239	NON_SYNONYMOUS_CODING Herp
2L	12153278	2L_12153278_SNP [dm3] 2L_12153278_SNP [dm6]	G	A	8.002e^-5	0.239	INTRON CG31760
2L	3910905	2L_3910905_SNP [dm3] 2L_3910905_SNP [dm6]	C	T	8.020e^-5	0.239	DOWNSTREAM CG31773 INTRON fred
2L	4643592	2L_4643592_SNP [dm3] 2L_4643592_SNP [dm6]	A	G	8.033e^-5	0.239	SYNONYMOUS_CODING CG15635 DOWNSTREAM BG642163	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	8751672	2L_8751672_SNP [dm3] 2L_8751672_SNP [dm6]	G	A	8.036e^-5	0.239	UPSTREAM CG12438 DOWNSTREAM CG45307 INTERGENIC
3L	12471824	3L_12471824_SNP [dm3] 3L_12478724_SNP [dm6]	A	G	8.061e^-5	0.239	INTRON CG10663
2L	4687976	2L_4687976_SNP [dm3] 2L_4687976_SNP [dm6]	G	A	8.072e^-5	0.239	NON_SYNONYMOUS_CODING Elba3 DOWNSTREAM CG11929 & 1 other	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	16242752	3R_16242752_SNP [dm3] 3R_20417030_SNP [dm6]	G	A	8.079e^-5	0.239	INTRON Gfrl
3R	20668144	3R_20668144_SNP [dm3] 3R_24842422_SNP [dm6]	T	C	8.081e^-5	0.239	UTR_5_PRIME Esp
3L	3872854	3L_3872854_SNP [dm3] 3L_3872854_SNP [dm6]	A	T	8.097e^-5	0.239	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2R	10505776	2R_10505776_SNP [dm3] 2R_14618271_SNP [dm6]	T	C	8.173e^-5	0.24	UPSTREAM Sec61beta & 1 other INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	4685757	2L_4685757_SNP [dm3] 2L_4685757_SNP [dm6]	G	C	8.185e^-5	0.24	NON_SYNONYMOUS_CODING CG11929
2L	21264351	2L_21264351_SNP [dm3] 2L_21264351_SNP [dm6]	G	A	8.195e^-5	0.24	DOWNSTREAM mir-4974 INTRON CG8671	TF binding site BDTNP1_TFBS_dl
2L	3911755	2L_3911755_INS [dm3] 2L_3911755_INS [dm6]	T	TT	8.197e^-5	0.24	DOWNSTREAM CG31773 INTRON fred
3L	6793188	3L_6793188_SNP [dm3] 3L_6800088_SNP [dm6]	C	A	8.198e^-5	0.24	INTERGENIC	enhancer mE1_CBP_Enhancers
2L	3501082	2L_3501082_SNP [dm3] 2L_3501082_SNP [dm6]	G	C	8.234e^-5	0.241	UTR_3_PRIME tim INTRON tim
3R	19576136	3R_19576136_SNP [dm3] 3R_23750414_SNP [dm6]	C	G	8.240e^-5	0.241	DOWNSTREAM RanBP3 INTRON Hmgcr	TF binding site mE1_TFBS_cad
3R	20668189	3R_20668189_SNP [dm3] 3R_24842467_SNP [dm6]	A	G	8.261e^-5	0.241	UTR_5_PRIME Esp
2L	15088451	2L_15088451_DEL [dm3] 2L_15088451_DEL [dm6]	CATGTAGAAAT...	C	8.312e^-5	0.241	INTRON CG15270
2L	21291021	2L_21291021_SNP [dm3] 2L_21291021_SNP [dm6]	T	C	8.318e^-5	0.241	SYNONYMOUS_CODING Gr39a UPSTREAM Gr39a INTRON Mio	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	5101708	2L_5101708_SNP [dm3] 2L_5101708_SNP [dm6]	A	G	8.327e^-5	0.241	INTRON Msp300
3R	24598147	3R_24598147_SNP [dm3] 3R_28772425_SNP [dm6]	T	C	8.336e^-5	0.241	INTERGENIC
2L	20613381	2L_20613381_SNP [dm3] 2L_20613381_SNP [dm6]	C	A	8.344e^-5	0.241	INTRON CR44909
2L	4649583	2L_4649583_SNP [dm3] 2L_4649583_SNP [dm6]	G	A	8.354e^-5	0.241	INTERGENIC
3L	5174705	3L_5174705_DEL [dm3] 3L_5181605_DEL [dm6]	AA	A	8.362e^-5	0.241	INTRON shep
2L	15764369	2L_15764369_SNP [dm3] 2L_15764369_SNP [dm6]	C	T	8.374e^-5	0.241	UTR_5_PRIME CG3793	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	5195532	2L_5195532_SNP [dm3] 2L_5195532_SNP [dm6]	T	C	8.394e^-5	0.241	UPSTREAM snmRNA:128 INTRON Msp300	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	10505531	2R_10505531_SNP [dm3] 2R_14618026_SNP [dm6]	C	G	8.427e^-5	0.242	UTR_5_PRIME Su_var_2-HP2 UPSTREAM Sec61beta	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_sens
2R	7274858	2R_7274858_INS [dm3] 2R_11387353_INS [dm6]	A	AT	8.449e^-5	0.242	INTRON sprt & 1 other
3R	25501210	3R_25501210_SNP [dm3] 3R_29675488_SNP [dm6]	T	C	8.462e^-5	0.242	UPSTREAM Cap-D2 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu
2L	5201067	2L_5201067_SNP [dm3] 2L_5201067_SNP [dm6]	C	A	8.470e^-5	0.242	SYNONYMOUS_CODING Msp300	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	15759517	3R_15759517_SNP [dm3] 3R_19933795_SNP [dm6]	G	A	8.486e^-5	0.242	SYNONYMOUS_CODING mira INTRON Hs6st	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	13165092	3R_13165092_SNP [dm3] 3R_17339370_SNP [dm6]	C	T	8.514e^-5	0.242	INTRON beat-IIa	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	15023659	X_15023659_INS [dm3] X_15129626_INS [dm6]	AA	TTT	8.532e^-5	0.242	INTRON drd
3R	13165159	3R_13165159_INS [dm3] 3R_17339437_INS [dm6]	A	ATGGACCATGA...	8.546e^-5	0.242	INTRON beat-IIa	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	2443879	2L_2443879_SNP [dm3] 2L_2443879_SNP [dm6]	G	A	8.550e^-5	0.242	INTRON dpp	enhancer FlyBase regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA
2L	3839542	2L_3839542_SNP [dm3] 2L_3839542_SNP [dm6]	T	A	8.553e^-5	0.242	DOWNSTREAM slp2 INTERGENIC	regulatory region REDfly_CRMs
2L	2864520	2L_2864520_SNP [dm3] 2L_2864520_SNP [dm6]	T	C	8.581e^-5	0.242	INTRON CG2991
2L	9040934	2L_9040934_DEL [dm3] 2L_9040934_DEL [dm6]	GAGTAAAA	G	8.584e^-5	0.242	INTERGENIC
3R	9467556	3R_9467556_SNP [dm3] 3R_13641834_SNP [dm6]	G	T	8.587e^-5	0.242	UTR_3_PRIME sqd INTRON sqd
3R	19122890	3R_19122890_SNP [dm3] 3R_23297168_SNP [dm6]	C	T	8.604e^-5	0.242	INTRON pnt
3R	23648954	3R_23648954_SNP [dm3] 3R_27823232_SNP [dm6]	C	T	8.623e^-5	0.242	INTRON CG34353
2L	12351173	2L_12351173_SNP [dm3] 2L_12351173_SNP [dm6]	T	C	8.623e^-5	0.242	INTRON bru-2
2L	1330060	2L_1330060_SNP [dm3] 2L_1330060_SNP [dm6]	A	G	8.638e^-5	0.242	DOWNSTREAM a5 INTERGENIC
3L	7741045	3L_7741045_SNP [dm3] 3L_7747945_SNP [dm6]	A	C	8.646e^-5	0.242	NON_SYNONYMOUS_CODING CG13685 INTRON CG32373	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	22979461	3R_22979461_SNP [dm3] 3R_27153739_SNP [dm6]	G	A	8.652e^-5	0.242	INTRON Men-b
2R	15512282	2R_15512282_SNP [dm3] 2R_19624777_SNP [dm6]	G	A	8.669e^-5	0.242	INTRON sm	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	15512326	2R_15512326_SNP [dm3] 2R_19624821_SNP [dm6]	G	T	8.669e^-5	0.242	INTRON sm	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	1472361	3L_1472361_SNP [dm3] 3L_1472361_SNP [dm6]	T	C	8.719e^-5	0.243	UPSTREAM CG32319 INTRON Ptp61F
X	12716697	X_12716697_SNP [dm3] X_12822664_SNP [dm6]	T	C	8.733e^-5	0.243	INTRON Pde9	TF binding site mE1_TFBS_HSA
2L	5084918	2L_5084918_SNP [dm3] 2L_5084918_SNP [dm6]	G	A	8.754e^-5	0.243	INTRON pgant5	TF binding site mE1_TFBS_cad
3R	13807712	3R_13807712_INS [dm3] 3R_17981990_INS [dm6]	C	CC	8.817e^-5	0.243	INTRON cpo
2L	1740543	2L_1740543_INS [dm3] 2L_1740543_INS [dm6]	G	GAG	8.827e^-5	0.243	INTRON CG17646
2L	12153178	2L_12153178_SNP [dm3] 2L_12153178_SNP [dm6]	G	A	8.855e^-5	0.243	INTRON CG31760
3R	24660049	3R_24660049_SNP [dm3] 3R_28834327_SNP [dm6]	C	T	8.859e^-5	0.243	SYNONYMOUS_CODING Apc	TF binding site mE1_TFBS_chinmo
X	11177295	X_11177295_SNP [dm3] X_11283262_SNP [dm6]	C	T	8.868e^-5	0.243	INTRON CG44422
2L	4599708	2L_4599708_DEL [dm3] 2L_4599708_DEL [dm6]	ACGAAGGCAGGCTACCTAT...	C	8.903e^-5	0.243	INTRON dp
2R	10552688	2R_10552688_SNP [dm3] 2R_14665183_SNP [dm6]	G	A	8.928e^-5	0.243	SYNONYMOUS_CODING CG12861 DOWNSTREAM CG12860
3L	4119270	3L_4119270_INS [dm3] 3L_4119270_INS [dm6]	T	TG	8.973e^-5	0.243	INTRON Chd64
2L	9992480	2L_9992480_INS [dm3] 2L_9992480_INS [dm6]	C	CC	8.984e^-5	0.243	INTRON bib	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	17383517	X_17383517_SNP [dm3] X_17489484_SNP [dm6]	A	G	8.994e^-5	0.243	UPSTREAM CG43658 INTRON CG43658
2L	856853	2L_856853_MNP [dm3] 2L_856853_MNP [dm6]	GGT	CAA	9.000e^-5	0.243	UPSTREAM CR45345 & 1 other DOWNSTREAM CG13949 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	15512294	2R_15512294_INS [dm3] 2R_19624789_INS [dm6]	C	CC	9.003e^-5	0.243	INTRON sm	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	2276414	2L_2276414_SNP [dm3] 2L_2276414_SNP [dm6]	G	A	9.004e^-5	0.243	INTRON CR43753
2L	2066884	2L_2066884_SNP [dm3] 2L_2066884_SNP [dm6]	G	C	9.010e^-5	0.243	NON_SYNONYMOUS_CODING dpr3
2L	2066885	2L_2066885_SNP [dm3] 2L_2066885_SNP [dm6]	C	T	9.010e^-5	0.243	NON_SYNONYMOUS_CODING dpr3
2L	12118671	2L_12118671_SNP [dm3] 2L_12118671_SNP [dm6]	G	C	9.020e^-5	0.243	INTRON CG17211	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	12118687	2L_12118687_SNP [dm3] 2L_12118687_SNP [dm6]	A	G	9.020e^-5	0.243	INTRON CG17211	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	2489661	X_2489661_SNP [dm3] X_2595628_SNP [dm6]	T	A	9.027e^-5	0.243	INTRON egh
X	2489676	X_2489676_SNP [dm3] X_2595643_SNP [dm6]	T	G	9.027e^-5	0.243	INTRON egh
X	2489677	X_2489677_SNP [dm3] X_2595644_SNP [dm6]	T	G	9.027e^-5	0.243	INTRON egh
X	2489694	X_2489694_SNP [dm3] X_2595661_SNP [dm6]	T	G	9.027e^-5	0.243	INTRON egh
2L	10504009	2L_10504009_SNP [dm3] 2L_10504009_SNP [dm6]	A	G	9.030e^-5	0.243	INTRON Myo31DF
X	3761239	X_3761239_SNP [dm3] X_3867206_SNP [dm6]	G	A	9.088e^-5	0.243	UPSTREAM yin INTRON yin	TF binding site mE1_TFBS_Trl
2L	9283967	2L_9283967_SNP [dm3] 2L_9283967_SNP [dm6]	C	T	9.094e^-5	0.243	INTRON Ggamma30A
2L	5427907	2L_5427907_SNP [dm3] 2L_5427907_SNP [dm6]	A	C	9.098e^-5	0.243	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	21284038	2L_21284038_SNP [dm3] 2L_21284038_SNP [dm6]	C	A	9.132e^-5	0.244	EXON Cyp6t2Psi
X	20205322	X_20205322_SNP [dm3] X_20334295_SNP [dm6]	G	T	9.135e^-5	0.244	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	18286755	2R_18286755_SNP [dm3] 2R_22399250_SNP [dm6]	C	T	9.205e^-5	0.245	INTRON babos	TF binding site BDTNP1_TFBS_dl
3R	26707089	3R_26707089_DEL [dm3] 3R_30881367_DEL [dm6]	AATATAAC	G	9.288e^-5	0.246	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC	TF binding site mE1_TFBS_HSA
3R	15241936	3R_15241936_SNP [dm3] 3R_19416214_SNP [dm6]	C	T	9.298e^-5	0.246	SYNONYMOUS_CODING CG31221
3L	17746526	3L_17746526_INS [dm3] 3L_17753426_INS [dm6]	C	TG	9.301e^-5	0.246	INTRON Adgf-A
2L	12210043	2L_12210043_DEL [dm3] 2L_12210043_DEL [dm6]	AATTCG	A	9.321e^-5	0.246	UTR_3_PRIME CG31759 DOWNSTREAM CG31759 INTRON aret
2L	1961477	2L_1961477_SNP [dm3] 2L_1961477_SNP [dm6]	T	A	9.347e^-5	0.246	INTRON erm	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12264912	2L_12264912_DEL [dm3] 2L_12264912_DEL [dm6]	ATCCAAGG	A	9.355e^-5	0.246	INTRON aret
2R	7600724	2R_7600724_DEL [dm3] 2R_11713219_DEL [dm6]	ACATA	A	9.361e^-5	0.246	INTRON pyr
2L	13712470	2L_13712470_SNP [dm3] 2L_13712470_SNP [dm6]	C	A	9.373e^-5	0.246	INTRON CG31814
2R	10499046	2R_10499046_DEL [dm3] 2R_14611541_DEL [dm6]	AA	A	9.416e^-5	0.246	INTRON Su_var_2-HP2
2L	4845014	2L_4845014_SNP [dm3] 2L_4845014_SNP [dm6]	G	A	9.428e^-5	0.246	INTRON mxt	TF binding site mE1_TFBS_chinmo
2L	4845586	2L_4845586_SNP [dm3] 2L_4845586_SNP [dm6]	A	C	9.428e^-5	0.246	INTRON mxt	TF binding site mE1_TFBS_chinmo
2L	4846441	2L_4846441_SNP [dm3] 2L_4846441_SNP [dm6]	C	A	9.428e^-5	0.246	UPSTREAM mxt INTRON mxt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi
2L	21127402	2L_21127402_SNP [dm3] 2L_21127402_SNP [dm6]	C	T	9.428e^-5	0.246	INTRON Nhe2
2L	4831614	2L_4831614_SNP [dm3] 2L_4831614_SNP [dm6]	G	A	9.441e^-5	0.246	SYNONYMOUS_CODING Ir25a UPSTREAM CG2976	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	9146685	2R_9146685_SNP [dm3] 2R_13259180_SNP [dm6]	C	T	9.468e^-5	0.246	UPSTREAM CG42319 DOWNSTREAM CG10799 INTERGENIC
3R	20651496	3R_20651496_SNP [dm3] 3R_24825774_SNP [dm6]	T	A	9.485e^-5	0.246	UPSTREAM niki DOWNSTREAM CG43166 & 1 other INTERGENIC
3R	25505597	3R_25505597_SNP [dm3] 3R_29679875_SNP [dm6]	T	C	9.493e^-5	0.246	SYNONYMOUS_CODING Cap-D2 DOWNSTREAM CG7582	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	4825649	2L_4825649_SNP [dm3] 2L_4825649_SNP [dm6]	C	T	9.505e^-5	0.246	NON_SYNONYMOUS_CODING CG15628
3R	13174016	3R_13174016_SNP [dm3] 3R_17348294_SNP [dm6]	A	G	9.506e^-5	0.246	INTRON beat-IIa
3R	19500384	3R_19500384_SNP [dm3] 3R_23674662_SNP [dm6]	A	T	9.508e^-5	0.246	INTERGENIC	TF binding site mE1_TFBS_inv
3L	5172464	3L_5172464_SNP [dm3] 3L_5179364_SNP [dm6]	A	T	9.520e^-5	0.246	INTRON shep
3R	10406892	3R_10406892_SNP [dm3] 3R_14581170_SNP [dm6]	A	G	9.563e^-5	0.247	INTRON stumps
3R	26492779	3R_26492779_INS [dm3] 3R_30667057_INS [dm6]	C	CC	9.575e^-5	0.247	DOWNSTREAM CR45191 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	2276064	2L_2276064_SNP [dm3] 2L_2276064_SNP [dm6]	G	A	9.587e^-5	0.247	INTRON CR43753 EXON CR43753
2L	2017450	2L_2017450_SNP [dm3] 2L_2017450_SNP [dm6]	T	A	9.616e^-5	0.247	UPSTREAM CG4238 INTRON CG4238
2L	12115400	2L_12115400_SNP [dm3] 2L_12115400_SNP [dm6]	T	C	9.625e^-5	0.247	INTRON CG17211
2L	1901190	2L_1901190_SNP [dm3] 2L_1901190_SNP [dm6]	G	T	9.635e^-5	0.247	INTRON CG7337
3R	18297130	3R_18297130_SNP [dm3] 3R_22471408_SNP [dm6]	T	A	9.674e^-5	0.248	INTRON Nrx-1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	13354359	3L_13354359_DEL [dm3] 3L_13361259_DEL [dm6]	CGTCCGAAAAATAAACGTAT...	C	9.682e^-5	0.248	INTERGENIC
3R	26707151	3R_26707151_SNP [dm3] 3R_30881429_SNP [dm6]	G	A	9.686e^-5	0.248	UPSTREAM CG12071 DOWNSTREAM CG15547 INTERGENIC
2L	5292481	2L_5292481_SNP [dm3] 2L_5292481_SNP [dm6]	G	A	9.711e^-5	0.248	INTRON vri	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	5194866	2L_5194866_SNP [dm3] 2L_5194866_SNP [dm6]	G	A	9.736e^-5	0.248	SYNONYMOUS_CODING Msp300	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	2275044	2L_2275044_SNP [dm3] 2L_2275044_SNP [dm6]	T	A	9.739e^-5	0.248	DOWNSTREAM CR43753 INTRON CR43753
2L	2686385	2L_2686385_SNP [dm3] 2L_2686385_SNP [dm6]	G	A	9.770e^-5	0.248	INTRON CG31690
2L	4684241	2L_4684241_SNP [dm3] 2L_4684241_SNP [dm6]	A	T	9.788e^-5	0.248	SYNONYMOUS_CODING Bsg25A INTRON CG11929	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	8608994	2L_8608994_SNP [dm3] 2L_8608994_SNP [dm6]	A	C	9.824e^-5	0.249	INTRON Sema-1a
X	13582821	X_13582821_DEL [dm3] X_13688788_DEL [dm6]	GG	G	9.833e^-5	0.249	INTRON CG9940	TF binding site BDTNP1_TFBS_twi
X	13583113	X_13583113_SNP [dm3] X_13689080_SNP [dm6]	A	T	9.854e^-5	0.249	INTRON CG9940
3R	15481754	3R_15481754_DEL [dm3] 3R_19656032_DEL [dm6]	TT	T	9.895e^-5	0.25	INTRON CG6184	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	1961490	2L_1961490_SNP [dm3] 2L_1961490_SNP [dm6]	T	A	9.909e^-5	0.25	INTRON erm	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
X	14522746	X_14522746_SNP [dm3] X_14628713_SNP [dm6]	T	C	9.931e^-5	0.25	INTRON NetA	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	22532527	3R_22532527_SNP [dm3] 3R_26706805_SNP [dm6]	G	A	9.933e^-5	0.25	INTRON amon
3L	6571082	3L_6571082_INS [dm3] 3L_6577982_INS [dm6]	A	ACTA	9.971e^-5	0.25	INTRON CG18769 & 1 other
3R	12093599	3R_12093599_SNP [dm3] 3R_16267877_SNP [dm6]	C	T	9.988e^-5	0.25	NON_SYNONYMOUS_CODING Mst89B DOWNSTREAM asun & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	7222507	2L_7222507_SNP [dm3] 2L_7222507_SNP [dm6]	C	T	9.999e^-5	0.25	SYNONYMOUS_CODING ico DOWNSTREAM Ndae1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
3L	12313261	3L_12313261_SNP [dm3] 3L_12320161_SNP [dm6]	C	T	1.001e^-4	0.25	INTERGENIC
2L	12518784	2L_12518784_SNP [dm3] 2L_12518784_SNP [dm6]	A	G	1.013e^-4	0.253	INTRON bun
2L	3068193	2L_3068193_SNP [dm3] 2L_3068193_SNP [dm6]	A	T	1.021e^-4	0.254	DOWNSTREAM toc & 1 other INTERGENIC
3R	18297070	3R_18297070_SNP [dm3] 3R_22471348_SNP [dm6]	C	G	1.022e^-4	0.254	SYNONYMOUS_CODING Nrx-1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	17625599	2L_17625599_SNP [dm3] 2L_17625599_SNP [dm6]	G	T	1.022e^-4	0.254	DOWNSTREAM CG15147 EXON CR44413	TF binding site BDTNP1_TFBS_da
2R	11397677	2R_11397677_INS [dm3] 2R_15510172_INS [dm6]	T	TAT	1.023e^-4	0.254	INTERGENIC
X	16581631	X_16581631_SNP [dm3] X_16687598_SNP [dm6]	G	C	1.027e^-4	0.254	UPSTREAM Sep4 INTRON Sep4	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3L	17022148	3L_17022148_SNP [dm3] 3L_17029048_SNP [dm6]	G	T	1.028e^-4	0.254	SYNONYMOUS_CODING CG7730 DOWNSTREAM Ilp8	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	2385278	2L_2385278_SNP [dm3] 2L_2385278_SNP [dm6]	C	G	1.028e^-4	0.254	NON_SYNONYMOUS_CODING CG3557 DOWNSTREAM CG9870
2L	19855337	2L_19855337_DEL [dm3] 2L_19855337_DEL [dm6]	AT	A	1.028e^-4	0.254	INTRON sick
3L	14081117	3L_14081117_SNP [dm3] 3L_14088017_SNP [dm6]	T	A	1.029e^-4	0.254	INTERGENIC
2L	6778710	2L_6778710_INS [dm3] 2L_6778710_INS [dm6]	G	GTG	1.030e^-4	0.254	UTR_3_PRIME nrv1 DOWNSTREAM nrv1 & 1 other
3R	26837851	3R_26837851_SNP [dm3] 3R_31012129_SNP [dm6]	G	A	1.033e^-4	0.254	INTRON 5-HT7
2L	10534456	2L_10534456_SNP [dm3] 2L_10534456_SNP [dm6]	G	A	1.034e^-4	0.254	UTR_5_PRIME CG18302 DOWNSTREAM CG18301
3R	983913	3R_983913_SNP [dm3] 3R_5158191_SNP [dm6]	T	C	1.039e^-4	0.254	INTRON dpr16
2R	16785804	2R_16785804_SNP [dm3] 2R_20898299_SNP [dm6]	T	A	1.040e^-4	0.254	UPSTREAM otp INTRON otp EXON CR43160	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	2018480	2L_2018480_SNP [dm3] 2L_2018480_SNP [dm6]	C	T	1.040e^-4	0.254	INTRON CG4238	TF binding site BDTNP1_TFBS_da
X	8016634	X_8016634_SNP [dm3] X_8122601_SNP [dm6]	C	A	1.041e^-4	0.254	INTRON cyr
3R	25306188	3R_25306188_SNP [dm3] 3R_29480466_SNP [dm6]	G	A	1.043e^-4	0.254	INTRON Ptp99A	TF binding site mE1_TFBS_cad
3L	13357065	3L_13357065_SNP [dm3] 3L_13363965_SNP [dm6]	C	T	1.044e^-4	0.254	INTERGENIC
3R	13270247	3R_13270247_SNP [dm3] 3R_17444525_SNP [dm6]	G	A	1.045e^-4	0.254	INTRON CG5873
2L	7267421	2L_7267421_DEL [dm3] 2L_7267421_DEL [dm6]	AGCTCCA	A	1.049e^-4	0.255	INTRON Wnt4	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	19500355	3R_19500355_SNP [dm3] 3R_23674633_SNP [dm6]	T	A	1.054e^-4	0.255	INTERGENIC	TF binding site mE1_TFBS_inv
2L	4847112	2L_4847112_SNP [dm3] 2L_4847112_SNP [dm6]	G	C	1.055e^-4	0.255	UPSTREAM mxt & 1 other INTRON mxt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	4651101	2L_4651101_SNP [dm3] 2L_4651101_SNP [dm6]	T	A	1.058e^-4	0.255	UPSTREAM CG3355 INTERGENIC
3R	13559301	3R_13559301_INS [dm3] 3R_17733579_INS [dm6]	C	CC	1.058e^-4	0.255	UPSTREAM CG14321 DOWNSTREAM Lgr1 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
2L	1611892	2L_1611892_SNP [dm3] 2L_1611892_SNP [dm6]	A	C	1.058e^-4	0.255	UPSTREAM CG31935 DOWNSTREAM RFeSP INTRON CG14352	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	4693871	2L_4693871_SNP [dm3] 2L_4693871_SNP [dm6]	T	G	1.059e^-4	0.255	UPSTREAM CG34351 INTERGENIC
3L	12402819	3L_12402819_INS [dm3] 3L_12409719_INS [dm6]	C	CCC	1.060e^-4	0.255	INTRON CG32103
2L	12552399	2L_12552399_SNP [dm3] 2L_12552399_SNP [dm6]	A	G	1.061e^-4	0.255	INTERGENIC
3R	20635335	3R_20635335_SNP [dm3] 3R_24809613_SNP [dm6]	A	G	1.062e^-4	0.255	DOWNSTREAM CG6980 INTRON CG5807
2R	9146664	2R_9146664_SNP [dm3] 2R_13259159_SNP [dm6]	T	C	1.064e^-4	0.255	UPSTREAM CG42319 DOWNSTREAM CG10799 INTERGENIC
2L	3083403	2L_3083403_DEL [dm3] 2L_3083403_DEL [dm6]	CCCAAAATCATGCCTCTTTT...	C	1.065e^-4	0.255	INTRON toc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA
2L	16212987	2L_16212987_SNP [dm3] 2L_16212987_SNP [dm6]	T	C	1.067e^-4	0.256	SYNONYMOUS_CODING CG31819	TF binding site BDTNP1_TFBS_twi
2L	17619907	2L_17619907_SNP [dm3] 2L_17619907_SNP [dm6]	C	T	1.070e^-4	0.256	INTERGENIC	TF binding site mE1_TFBS_inv
2L	4641498	2L_4641498_SNP [dm3] 2L_4641498_SNP [dm6]	A	T	1.073e^-4	0.256	NON_SYNONYMOUS_CODING BG642163
3R	20651486	3R_20651486_SNP [dm3] 3R_24825764_SNP [dm6]	T	A	1.075e^-4	0.256	UPSTREAM niki DOWNSTREAM CG43166 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad
2L	3375404	2L_3375404_SNP [dm3] 2L_3375404_SNP [dm6]	G	A	1.075e^-4	0.256	NON_SYNONYMOUS_CODING CG15412 DOWNSTREAM CG9662	TF binding site mE1_TFBS_inv
2L	2517331	2L_2517331_SNP [dm3] 2L_2517331_SNP [dm6]	A	C	1.076e^-4	0.256	SYNONYMOUS_CODING CG3528
3R	8954331	3R_8954331_SNP [dm3] 3R_13128609_SNP [dm6]	A	G	1.077e^-4	0.256	INTRON timeout & 1 other
2R	7280615	2R_7280615_INS [dm3] 2R_11393110_INS [dm6]	T	TAGGATATATATATATACAA...	1.079e^-4	0.256	INTRON sprt
3R	20651957	3R_20651957_SNP [dm3] 3R_24826235_SNP [dm6]	T	G	1.081e^-4	0.256	UPSTREAM niki DOWNSTREAM RabX4 INTRON CG43166	transposable element FlyBase
2L	11314698	2L_11314698_SNP [dm3] 2L_11314698_SNP [dm6]	T	C	1.085e^-4	0.257	INTERGENIC
3R	19625275	3R_19625275_SNP [dm3] 3R_23799553_SNP [dm6]	T	C	1.091e^-4	0.258	INTRON mbc
2R	18284429	2R_18284429_DEL [dm3] 2R_22396924_DEL [dm6]	TATTCGAT	T	1.092e^-4	0.258	INTRON babos	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	788798	2R_788798_SNP [dm3] 2R_4901293_SNP [dm6]	G	A	1.094e^-4	0.258	INTRON CG44102	transposable element FlyBase
2R	2356853	2R_2356853_SNP [dm3] 2R_6469348_SNP [dm6]	T	C	1.096e^-4	0.258	INTERGENIC	transposable element FlyBase
2L	6477627	2L_6477627_SNP [dm3] 2L_6477627_SNP [dm6]	T	A	1.096e^-4	0.258	UTR_3_PRIME Sec61alpha UPSTREAM CG9536	TF binding site mE1_TFBS_HSA
2L	4104536	2L_4104536_SNP [dm3] 2L_4104536_SNP [dm6]	T	C	1.099e^-4	0.258	INTRON ed
2L	16970192	2L_16970192_SNP [dm3] 2L_16970192_SNP [dm6]	T	A	1.101e^-4	0.258	INTERGENIC
2L	15076139	2L_15076139_SNP [dm3] 2L_15076139_SNP [dm6]	T	A	1.102e^-4	0.258	INTRON CG15270
2L	5185073	2L_5185073_SNP [dm3] 2L_5185073_SNP [dm6]	C	T	1.103e^-4	0.258	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	24078635	3R_24078635_SNP [dm3] 3R_28252913_SNP [dm6]	G	A	1.104e^-4	0.258	INTERGENIC
2L	3579283	2L_3579283_SNP [dm3] 2L_3579283_SNP [dm6]	T	C	1.105e^-4	0.258	SYNONYMOUS_CODING sob	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	5408053	2L_5408053_SNP [dm3] 2L_5408053_SNP [dm6]	T	C	1.106e^-4	0.258	INTRON H15	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	7786336	2L_7786336_SNP [dm3] 2L_7786336_SNP [dm6]	A	T	1.106e^-4	0.258	UTR_3_PRIME CG7149 DOWNSTREAM CG7154
X	9166170	X_9166170_SNP [dm3] X_9272137_SNP [dm6]	C	G	1.107e^-4	0.258	NON_SYNONYMOUS_CODING Cfp1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo
2L	3976388	2L_3976388_SNP [dm3] 2L_3976388_SNP [dm6]	T	C	1.109e^-4	0.258	INTRON fred
2L	4680000	2L_4680000_SNP [dm3] 2L_4680000_SNP [dm6]	G	A	1.113e^-4	0.258	INTERGENIC
2R	1735019	2R_1735019_SNP [dm3] 2R_5847514_SNP [dm6]	T	C	1.116e^-4	0.258	INTRON dpr12	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	5173068	3L_5173068_SNP [dm3] 3L_5179968_SNP [dm6]	A	C	1.116e^-4	0.258	INTRON shep
2R	18059962	2R_18059962_DEL [dm3] 2R_22172457_DEL [dm6]	TATT	T	1.117e^-4	0.258	DOWNSTREAM CG3045 INTRON a
2L	6676605	2L_6676605_INS [dm3] 2L_6676605_INS [dm6]	A	AAA	1.117e^-4	0.258	UTR_5_PRIME cort UPSTREAM cort DOWNSTREAM CG11329
3R	12089609	3R_12089609_SNP [dm3] 3R_16263887_SNP [dm6]	T	G	1.120e^-4	0.258	NON_SYNONYMOUS_CODING bor UPSTREAM asun	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	17747524	2L_17747524_SNP [dm3] 2L_17747524_SNP [dm6]	C	T	1.121e^-4	0.258	INTRON CadN	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	2695207	2L_2695207_SNP [dm3] 2L_2695207_SNP [dm6]	A	C	1.121e^-4	0.258	DOWNSTREAM CG15398 INTRON CG31690
2R	789855	2R_789855_SNP [dm3] 2R_4902350_SNP [dm6]	T	A	1.122e^-4	0.258	INTRON CG44102
2L	10559017	2L_10559017_DEL [dm3] 2L_10559017_DEL [dm6]	ATTTCGAGACCC...	T	1.127e^-4	0.258	INTRON Trim9
2R	3733654	2R_3733654_SNP [dm3] 2R_7846149_SNP [dm6]	G	T	1.129e^-4	0.258	INTRON Dgk
2L	5056049	2L_5056049_DEL [dm3] 2L_5056049_DEL [dm6]	TGT	T	1.132e^-4	0.258	UTR_3_PRIME His3.3A & 1 other DOWNSTREAM His3.3A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	4827156	2L_4827156_SNP [dm3] 2L_4827156_SNP [dm6]	C	T	1.132e^-4	0.258	INTRON CG15628	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	12227609	2L_12227609_SNP [dm3] 2L_12227609_SNP [dm6]	A	T	1.133e^-4	0.258	INTRON aret
2L	4831728	2L_4831728_SNP [dm3] 2L_4831728_SNP [dm6]	C	T	1.133e^-4	0.258	SYNONYMOUS_CODING Ir25a	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	18370050	X_18370050_INS [dm3] X_18476017_INS [dm6]	T	TA	1.133e^-4	0.258	INTRON CG32547	TF binding site mE1_TFBS_HSA
3L	2285041	3L_2285041_INS [dm3] 3L_2285041_INS [dm6]	C	CATCTTTTTTTTTTTTCA...	1.133e^-4	0.258	INTRON MsR2
X	5323943	X_5323943_SNP [dm3] X_5429910_SNP [dm6]	C	T	1.139e^-4	0.259	UTR_5_PRIME CG15784 UPSTREAM CG15784 DOWNSTREAM CR45517
2L	1339871	2L_1339871_SNP [dm3] 2L_1339871_SNP [dm6]	G	C	1.140e^-4	0.259	INTERGENIC	TF binding site mE1_TFBS_cad
3L	6311258	3L_6311258_SNP [dm3] 3L_6318158_SNP [dm6]	G	T	1.140e^-4	0.259	INTERGENIC	regulatory region REDfly_CRMs
3R	22529081	3R_22529081_SNP [dm3] 3R_26703359_SNP [dm6]	T	G	1.144e^-4	0.259	INTRON amon
3R	22035060	3R_22035060_SNP [dm3] 3R_26209338_SNP [dm6]	A	G	1.146e^-4	0.259	INTRON CR44320
2R	19145048	2R_19145048_SNP [dm3] 2R_23257525_SNP [dm6]	C	A	1.147e^-4	0.259	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	3218519	2L_3218519_SNP [dm3] 2L_3218519_SNP [dm6]	G	A	1.147e^-4	0.259	INTERGENIC
2L	4656910	2L_4656910_DEL [dm3] 2L_4656910_DEL [dm6]	GG	G	1.149e^-4	0.259	INTERGENIC
X	17635879	X_17635879_DEL [dm3] X_17741846_DEL [dm6]	CC	C	1.150e^-4	0.259	INTRON CG42684	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	18737149	3L_18737149_SNP [dm3] 3L_18744049_SNP [dm6]	G	T	1.155e^-4	0.26	UPSTREAM CG6885 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk
3R	18588833	3R_18588833_SNP [dm3] 3R_22763111_SNP [dm6]	T	A	1.157e^-4	0.26	NON_SYNONYMOUS_CODING CG4723 DOWNSTREAM CG4721 INTRON Usp12-46 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	26492784	3R_26492784_SNP [dm3] 3R_30667062_SNP [dm6]	C	A	1.159e^-4	0.26	DOWNSTREAM CR45191 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv
2L	1718517	2L_1718517_SNP [dm3] 2L_1718517_SNP [dm6]	G	C	1.160e^-4	0.26	INTRON Rim2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	17820604	3R_17820604_DEL [dm3] 3R_21994882_DEL [dm6]	GG	G	1.164e^-4	0.26	INTRON Eip93F
2L	10555304	2L_10555304_DEL [dm3] 2L_10555304_DEL [dm6]	ATGAACTGTATGAAAAGGCA...	A	1.164e^-4	0.26	INTRON Trim9	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	1992664	2L_1992664_DEL [dm3] 2L_1992664_DEL [dm6]	AA	A	1.165e^-4	0.26	UPSTREAM Obp22a INTERGENIC
2L	7222309	2L_7222309_SNP [dm3] 2L_7222309_SNP [dm6]	G	A	1.168e^-4	0.26	SYNONYMOUS_CODING ico	TF binding site mE1_TFBS_sens
2R	6828338	2R_6828338_SNP [dm3] 2R_10940833_SNP [dm6]	C	T	1.170e^-4	0.261	SYNONYMOUS_CODING Spn47C
3R	24328993	3R_24328993_SNP [dm3] 3R_28503271_SNP [dm6]	C	A	1.173e^-4	0.261	SYNONYMOUS_CODING Dhc98D	TF binding site mE1_TFBS_cad
3R	27252656	3R_27252656_DEL [dm3] 3R_31426934_DEL [dm6]	TCTTGTATTACTAGAGTAAA...	T	1.175e^-4	0.261	INTRON Gprk2
2R	4500500	2R_4500500_SNP [dm3] 2R_8612995_SNP [dm6]	T	C	1.177e^-4	0.261	DOWNSTREAM rgr INTRON CG8642	TF binding site mE1_TFBS_cad
X	21324963	X_21324963_DEL [dm3] X_21453936_DEL [dm6]	TT	T	1.180e^-4	0.261	INTRON CG42343
2R	10072409	2R_10072409_SNP [dm3] 2R_14184904_SNP [dm6]	T	C	1.180e^-4	0.261	UPSTREAM CG30069 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2018595	2L_2018595_SNP [dm3] 2L_2018595_SNP [dm6]	A	G	1.187e^-4	0.262	INTRON CG4238	TF binding site BDTNP1_TFBS_da
2L	12306680	2L_12306680_SNP [dm3] 2L_12306680_SNP [dm6]	G	A	1.188e^-4	0.262	INTRON aret
3R	12621063	3R_12621063_DEL [dm3] 3R_16795341_DEL [dm6]	AAAATTATATTCTGCCAGAA...	A	1.189e^-4	0.262	INTERGENIC
2L	5185388	2L_5185388_SNP [dm3] 2L_5185388_SNP [dm6]	C	A	1.193e^-4	0.263	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	15091274	2L_15091274_DEL [dm3] 2L_15091274_DEL [dm6]	TAGCTCTT	T	1.197e^-4	0.263	INTRON CG15270
2R	4416934	2R_4416934_SNP [dm3] 2R_8529429_SNP [dm6]	C	G	1.197e^-4	0.263	INTRON mtt
2R	14495114	2R_14495114_DEL [dm3] 2R_18607609_DEL [dm6]	CC	C	1.199e^-4	0.263	INTRON GEFmeso	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
3R	19465071	3R_19465071_SNP [dm3] 3R_23639349_SNP [dm6]	T	A	1.201e^-4	0.263	INTRON CG31145	TF binding site mE1_TFBS_inv
2R	9481981	2R_9481981_SNP [dm3] 2R_13594476_SNP [dm6]	C	T	1.204e^-4	0.263	SYNONYMOUS_CODING CG6197	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
3R	20663163	3R_20663163_SNP [dm3] 3R_24837441_SNP [dm6]	A	T	1.205e^-4	0.263	INTRON sosie
2L	324232	2L_324232_SNP [dm3] 2L_324232_SNP [dm6]	C	T	1.206e^-4	0.263	INTRON Plc21C
2L	324240	2L_324240_SNP [dm3] 2L_324240_SNP [dm6]	C	T	1.206e^-4	0.263	INTRON Plc21C
3R	25503719	3R_25503719_SNP [dm3] 3R_29677997_SNP [dm6]	A	G	1.206e^-4	0.263	SYNONYMOUS_CODING Cap-D2	TF binding site mE1_TFBS_cad
2L	996207	2L_996207_DEL [dm3] 2L_996207_DEL [dm6]	CC	T	1.207e^-4	0.263	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	19358438	2R_19358438_INS [dm3] 2R_23470915_INS [dm6]	T	TAGAT	1.207e^-4	0.263	INTRON CG43795 & 1 other
2L	9217194	2L_9217194_SNP [dm3] 2L_9217194_SNP [dm6]	A	C	1.212e^-4	0.263	INTRON tai
2L	17403243	2L_17403243_DEL [dm3] 2L_17403243_DEL [dm6]	TAAAA	CGGC	1.214e^-4	0.263	INTRON CLIP-190
2L	7788501	2L_7788501_DEL [dm3] 2L_7788501_DEL [dm6]	CATTT	C	1.214e^-4	0.263	INTRON CG7149
2L	14228977	2L_14228977_SNP [dm3] 2L_14228977_SNP [dm6]	G	T	1.216e^-4	0.263	INTRON Dyrk2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10613202	X_10613202_DEL [dm3] X_10719169_DEL [dm6]	CTTGACAATTTAATTTAAAC...	C	1.217e^-4	0.263	INTRON CG32676
3R	15433371	3R_15433371_SNP [dm3] 3R_19607649_SNP [dm6]	G	T	1.218e^-4	0.263	NON_SYNONYMOUS_CODING CG17751
2R	17811032	2R_17811032_SNP [dm3] 2R_21923527_SNP [dm6]	G	T	1.219e^-4	0.263	INTRON Fili	TF binding site mE1_TFBS_HSA mE1_TFBS_Kr
2L	14652747	2L_14652747_DEL [dm3] 2L_14652747_DEL [dm6]	ATTAAAGTCAA...	A	1.220e^-4	0.263	INTRON osp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25299520	3R_25299520_SNP [dm3] 3R_29473798_SNP [dm6]	T	C	1.225e^-4	0.264	INTRON Ptp99A
3R	18451115	3R_18451115_SNP [dm3] 3R_22625393_SNP [dm6]	A	G	1.229e^-4	0.264	INTRON loco	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	19702437	2L_19702437_SNP [dm3] 2L_19702437_SNP [dm6]	G	A	1.233e^-4	0.265	INTRON Lar	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3R	17827272	3R_17827272_SNP [dm3] 3R_22001550_SNP [dm6]	T	C	1.235e^-4	0.265	INTRON Eip93F	TF binding site BDTNP1_TFBS_da mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12058224	2L_12058224_SNP [dm3] 2L_12058224_SNP [dm6]	G	C	1.237e^-4	0.265	UTR_3_PRIME RpL7-like & 1 other DOWNSTREAM Rab3-GAP & 1 other
2L	18748926	2L_18748926_SNP [dm3] 2L_18748926_SNP [dm6]	G	A	1.238e^-4	0.265	INTERGENIC
2L	7783290	2L_7783290_DEL [dm3] 2L_7783290_DEL [dm6]	ATA	A	1.239e^-4	0.265	SPLICE_SITE_REGION CG7154 DOWNSTREAM CG7164 INTRON CG7154	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	21050757	2L_21050757_DEL [dm3] 2L_21050757_DEL [dm6]	TTATAGAT	T	1.240e^-4	0.265	INTRON CG42238	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	14847515	2L_14847515_INS [dm3] 2L_14847515_INS [dm6]	G	GG	1.243e^-4	0.265	INTRON CG15279
2L	7898797	2L_7898797_INS [dm3] 2L_7898797_INS [dm6]	T	TAT	1.244e^-4	0.265	INTRON Snoo	TF binding site mE1_TFBS_cad
2R	7139613	2R_7139613_SNP [dm3] 2R_11252108_SNP [dm6]	G	A	1.250e^-4	0.266	UTR_3_PRIME Cpr47Ea DOWNSTREAM Or47a	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	2063993	2L_2063993_SNP [dm3] 2L_2063993_SNP [dm6]	T	G	1.254e^-4	0.267	INTRON dpr3
2L	4676089	2L_4676089_INS [dm3] 2L_4676089_INS [dm6]	A	ATTCTATTCTA...	1.255e^-4	0.267	INTERGENIC
2L	4598999	2L_4598999_SNP [dm3] 2L_4598999_SNP [dm6]	A	G	1.259e^-4	0.267	INTRON dp	TF binding site mE1_TFBS_sbb
3R	23947018	3R_23947018_SNP [dm3] 3R_28121296_SNP [dm6]	G	C	1.260e^-4	0.267	INTERGENIC
3R	11955831	3R_11955831_SNP [dm3] 3R_16130109_SNP [dm6]	C	G	1.261e^-4	0.267	INTRON Sb
2R	765824	2R_765824_SNP [dm3] 2R_4878319_SNP [dm6]	A	G	1.268e^-4	0.268	INTERGENIC
2L	4846670	2L_4846670_SNP [dm3] 2L_4846670_SNP [dm6]	C	T	1.269e^-4	0.268	UPSTREAM mxt INTRON mxt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	25505594	3R_25505594_SNP [dm3] 3R_29679872_SNP [dm6]	T	G	1.272e^-4	0.268	SYNONYMOUS_CODING Cap-D2 DOWNSTREAM CG7582	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	4120381	2L_4120381_SNP [dm3] 2L_4120381_SNP [dm6]	G	A	1.273e^-4	0.268	NON_SYNONYMOUS_CODING Sr-CIII
3R	10657621	3R_10657621_SNP [dm3] 3R_14831899_SNP [dm6]	C	A	1.275e^-4	0.268	INTRON btsz
2R	16681545	2R_16681545_DEL [dm3] 2R_20794040_DEL [dm6]	TT	T	1.277e^-4	0.268	DOWNSTREAM CG15225 INTERGENIC
3L	15864259	3L_15864259_SNP [dm3] 3L_15871159_SNP [dm6]	A	G	1.279e^-4	0.268	INTRON pHCl
3L	15580951	3L_15580951_SNP [dm3] 3L_15587851_SNP [dm6]	T	C	1.280e^-4	0.268	UTR_5_PRIME CG7656 INTRON CG7656	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_shn mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
2L	12658656	2L_12658656_SNP [dm3] 2L_12658656_SNP [dm6]	T	C	1.281e^-4	0.268	INTRON pdm2
2L	3178971	2L_3178971_DEL [dm3] 2L_3178971_DEL [dm6]	GGCCAGAG	G	1.283e^-4	0.268	INTRON CG34393
2L	8027387	2L_8027387_SNP [dm3] 2L_8027387_SNP [dm6]	T	C	1.284e^-4	0.268	SYNONYMOUS_CODING CG7367 DOWNSTREAM Tg
X	14102983	X_14102983_SNP [dm3] X_14208950_SNP [dm6]	T	A	1.284e^-4	0.268	INTRON l_1_G0007 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	4859723	2L_4859723_SNP [dm3] 2L_4859723_SNP [dm6]	G	T	1.286e^-4	0.268	INTRON pog
2L	16599274	2L_16599274_DEL [dm3] 2L_16599274_DEL [dm6]	AA	A	1.288e^-4	0.268	INTRON CG42389	TF binding site BDTNP1_TFBS_dl
3L	5717361	3L_5717361_DEL [dm3] 3L_5724261_DEL [dm6]	TT	T	1.288e^-4	0.268	INTRON sif
2L	4590655	2L_4590655_DEL [dm3] 2L_4590655_DEL [dm6]	TTT	T	1.291e^-4	0.268	INTRON dp
3R	25100092	3R_25100092_SNP [dm3] 3R_29274370_SNP [dm6]	G	A	1.292e^-4	0.268	INTERGENIC	regulatory region REDfly_CRMs
2L	4834522	2L_4834522_SNP [dm3] 2L_4834522_SNP [dm6]	C	T	1.293e^-4	0.268	UPSTREAM Ir25a DOWNSTREAM tank INTRON Ir25a
3R	25855902	3R_25855902_SNP [dm3] 3R_30030180_SNP [dm6]	G	A	1.295e^-4	0.268	INTRON Axn	TF binding site BDTNP1_TFBS_dl
3R	2242453	3R_2242453_SNP [dm3] 3R_6416731_SNP [dm6]	T	A	1.301e^-4	0.268	INTRON gpp
3L	7844460	3L_7844460_SNP [dm3] 3L_7851360_SNP [dm6]	T	C	1.303e^-4	0.268	INTRON Pdp1	regulatory region REDfly_CRMs TF binding site mE1_TFBS_cad
3R	20656042	3R_20656042_SNP [dm3] 3R_24830320_SNP [dm6]	T	G	1.304e^-4	0.268	UTR_5_PRIME CG43273 UPSTREAM CG31357	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3R	22520451	3R_22520451_SNP [dm3] 3R_26694729_SNP [dm6]	T	A	1.305e^-4	0.268	INTERGENIC
2L	7798089	2L_7798089_SNP [dm3] 2L_7798089_SNP [dm6]	G	C	1.307e^-4	0.268	INTRON Herp
2L	5069554	2L_5069554_SNP [dm3] 2L_5069554_SNP [dm6]	C	T	1.308e^-4	0.268	DOWNSTREAM mir-2495 & 1 other INTRON qtc
2L	2134221	2L_2134221_SNP [dm3] 2L_2134221_SNP [dm6]	C	T	1.308e^-4	0.268	INTRON GlyP
3L	1476844	3L_1476844_SNP [dm3] 3L_1476844_SNP [dm6]	C	A	1.311e^-4	0.268	SYNONYMOUS_CODING stet UPSTREAM robl62A	TF binding site mE1_TFBS_sens
X	18329330	X_18329330_INS [dm3] X_18435297_INS [dm6]	G	GAGCCGGG	1.313e^-4	0.268	DOWNSTREAM CG32548 INTERGENIC
2L	4846334	2L_4846334_SNP [dm3] 2L_4846334_SNP [dm6]	A	C	1.313e^-4	0.268	UTR_5_PRIME mxt INTRON mxt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_sens
2L	18998097	2L_18998097_SNP [dm3] 2L_18998097_SNP [dm6]	T	C	1.314e^-4	0.268	INTRON CG31792	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	19500366	3R_19500366_SNP [dm3] 3R_23674644_SNP [dm6]	T	G	1.314e^-4	0.268	INTERGENIC	TF binding site mE1_TFBS_inv
2R	4220176	2R_4220176_SNP [dm3] 2R_8332671_SNP [dm6]	C	A	1.314e^-4	0.268	INTRON pdm3	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2R	19460339	2R_19460339_INS [dm3] 2R_23572816_INS [dm6]	A	AA	1.316e^-4	0.268	INTRON apt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_Kr mE1_TFBS_Trl
3L	3416959	3L_3416959_SNP [dm3] 3L_3416959_SNP [dm6]	T	C	1.316e^-4	0.268	UTR_5_PRIME sty INTRON sty	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D
X	15555980	X_15555980_DEL [dm3] X_15661947_DEL [dm6]	CTTTTAGTGCAC...	C	1.318e^-4	0.268	UPSTREAM CG8119 DOWNSTREAM CR43299 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3L	12112682	3L_12112682_INS [dm3] 3L_12119582_INS [dm6]	A	AATTTAAA	1.322e^-4	0.269	UTR_3_PRIME ssp UPSTREAM CG11560	TF binding site BDTNP1_TFBS_dl mE1_TFBS_GATAe
2R	16707647	2R_16707647_DEL [dm3] 2R_20820142_DEL [dm6]	ACGCGCACCATA...	A	1.325e^-4	0.269	INTERGENIC
3L	13355328	3L_13355328_SNP [dm3] 3L_13362228_SNP [dm6]	T	A	1.329e^-4	0.269	INTERGENIC
X	13583112	X_13583112_SNP [dm3] X_13689079_SNP [dm6]	A	T	1.333e^-4	0.269	INTRON CG9940
X	3655147	X_3655147_SNP [dm3] X_3761114_SNP [dm6]	A	G	1.335e^-4	0.269	INTRON tlk	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	22035144	3R_22035144_SNP [dm3] 3R_26209422_SNP [dm6]	A	G	1.335e^-4	0.269	INTRON CR44320
3L	13355299	3L_13355299_SNP [dm3] 3L_13362199_SNP [dm6]	T	C	1.337e^-4	0.269	INTERGENIC
2R	18986637	2R_18986637_SNP [dm3] 2R_23099114_SNP [dm6]	G	A	1.338e^-4	0.269	DOWNSTREAM RpL37b INTERGENIC
3L	14908900	3L_14908900_DEL [dm3] 3L_14915800_DEL [dm6]	AA	A	1.340e^-4	0.269	INTRON DCX-EMAP
2R	6587023	2R_6587023_DEL [dm3] 2R_10699518_DEL [dm6]	GT	G	1.341e^-4	0.269	INTRON stan	TF binding site mE1_TFBS_HSA
2L	3633935	2L_3633935_SNP [dm3] 2L_3633935_SNP [dm6]	A	T	1.342e^-4	0.269	INTRON for	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA
2L	3911750	2L_3911750_SNP [dm3] 2L_3911750_SNP [dm6]	T	G	1.342e^-4	0.269	DOWNSTREAM CG31773 INTRON fred
2R	2491094	2R_2491094_SNP [dm3] 2R_6603589_SNP [dm6]	T	C	1.344e^-4	0.269	INTRON jing	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	2517520	2L_2517520_SNP [dm3] 2L_2517520_SNP [dm6]	G	C	1.345e^-4	0.269	SYNONYMOUS_CODING CG3528
2L	16948894	2L_16948894_SNP [dm3] 2L_16948894_SNP [dm6]	G	T	1.346e^-4	0.269	INTRON CR44393
2L	12518858	2L_12518858_SNP [dm3] 2L_12518858_SNP [dm6]	C	T	1.348e^-4	0.269	INTRON bun
2L	6758948	2L_6758948_SNP [dm3] 2L_6758948_SNP [dm6]	T	G	1.355e^-4	0.269	NON_SYNONYMOUS_CODING CG11322 DOWNSTREAM CG11321	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	3741721	X_3741721_DEL [dm3] X_3847688_DEL [dm6]	AA	A	1.355e^-4	0.269	INTRON ec	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	13582911	X_13582911_SNP [dm3] X_13688878_SNP [dm6]	T	C	1.357e^-4	0.269	INTRON CG9940	TF binding site BDTNP1_TFBS_twi
2L	4709248	2L_4709248_SNP [dm3] 2L_4709248_SNP [dm6]	T	A	1.358e^-4	0.269	INTRON CG34351
2L	4710054	2L_4710054_DEL [dm3] 2L_4710054_DEL [dm6]	CCATTA	C	1.358e^-4	0.269	INTRON CG34351
2L	2063349	2L_2063349_SNP [dm3] 2L_2063349_SNP [dm6]	C	G	1.359e^-4	0.269	INTRON dpr3
2L	2385455	2L_2385455_INS [dm3] 2L_2385455_INS [dm6]	C	CA	1.361e^-4	0.269	DOWNSTREAM CG9870 INTRON CG3557
2L	2021160	2L_2021160_SNP [dm3] 2L_2021160_SNP [dm6]	T	C	1.365e^-4	0.269	INTRON CG4238
X	2218339	X_2218339_SNP [dm3] X_2324306_SNP [dm6]	C	A	1.369e^-4	0.269	DOWNSTREAM CG14050 INTRON phl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	20476223	3R_20476223_SNP [dm3] 3R_24650501_SNP [dm6]	T	C	1.369e^-4	0.269	SYNONYMOUS_CODING ash2 UPSTREAM puf & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
2L	21197896	2L_21197896_SNP [dm3] 2L_21197896_SNP [dm6]	T	C	1.369e^-4	0.269	INTRON Ret
3R	21952664	3R_21952664_SNP [dm3] 3R_26126942_SNP [dm6]	G	A	1.369e^-4	0.269	SYNONYMOUS_CODING CG14556 INTRON CG31324
2L	12313169	2L_12313169_SNP [dm3] 2L_12313169_SNP [dm6]	C	T	1.370e^-4	0.269	UTR_3_PRIME aret DOWNSTREAM aret
2L	4682833	2L_4682833_SNP [dm3] 2L_4682833_SNP [dm6]	C	T	1.371e^-4	0.269	NON_SYNONYMOUS_CODING CG11929 DOWNSTREAM Bsg25A
X	16038886	X_16038886_INS [dm3] X_16144853_INS [dm6]	A	AA	1.372e^-4	0.269	INTRON disco-r	TF binding site BDTNP1_TFBS_dl
3L	21980293	3L_21980293_DEL [dm3] 3L_21987193_DEL [dm6]	TCGAACCCAAGT...	T	1.372e^-4	0.269	DOWNSTREAM Act79B INTERGENIC
2L	5195638	2L_5195638_SNP [dm3] 2L_5195638_SNP [dm6]	T	C	1.372e^-4	0.269	UPSTREAM snmRNA:128 INTRON Msp300	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	3980075	2L_3980075_SNP [dm3] 2L_3980075_SNP [dm6]	G	T	1.374e^-4	0.269	INTRON fred
2L	7507870	2L_7507870_SNP [dm3] 2L_7507870_SNP [dm6]	T	C	1.374e^-4	0.269	INTRON RapGAP1	TF binding site BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	5603066	2L_5603066_SNP [dm3] 2L_5603066_SNP [dm6]	C	G	1.376e^-4	0.269	NON_SYNONYMOUS_CODING CG14010	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	24664506	3R_24664506_SNP [dm3] 3R_28838784_SNP [dm6]	A	G	1.376e^-4	0.269	SYNONYMOUS_CODING Apc	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	23593261	3R_23593261_SNP [dm3] 3R_27767539_SNP [dm6]	T	A	1.379e^-4	0.27	DOWNSTREAM CG34353 INTERGENIC
2L	12227598	2L_12227598_SNP [dm3] 2L_12227598_SNP [dm6]	C	T	1.380e^-4	0.27	INTRON aret
3R	26080147	3R_26080147_SNP [dm3] 3R_30254425_SNP [dm6]	T	G	1.382e^-4	0.27	DOWNSTREAM CG18404 INTERGENIC
2L	1006671	2L_1006671_SNP [dm3] 2L_1006671_SNP [dm6]	C	T	1.386e^-4	0.27	INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_ttk
4	1174442	4_1174442_DEL [dm3] 4_1153816_DEL [dm6]	AGAGTGAAAGCA...	A	1.386e^-4	0.27	INTRON CG32017 & 1 other	transposable element FlyBase
3R	11721982	3R_11721982_INS [dm3] 3R_15896260_INS [dm6]	G	GGCTG	1.387e^-4	0.27	UPSTREAM CG14877 DOWNSTREAM glob1 INTERGENIC
3R	2094767	3R_2094767_SNP [dm3] 3R_6269045_SNP [dm6]	A	G	1.390e^-4	0.27	UPSTREAM Osi11 INTERGENIC
X	13583057	X_13583057_SNP [dm3] X_13689024_SNP [dm6]	T	C	1.393e^-4	0.27	INTRON CG9940
2L	21263824	2L_21263824_DEL [dm3] 2L_21263824_DEL [dm6]	CCAAA	C	1.397e^-4	0.271	UPSTREAM mir-4974 INTRON CG8671	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	21067761	3R_21067761_SNP [dm3] 3R_25242039_SNP [dm6]	A	G	1.402e^-4	0.271	START_GAINED CG11854 UTR_5_PRIME CG11854 DOWNSTREAM to & 1 other
2L	17620247	2L_17620247_SNP [dm3] 2L_17620247_SNP [dm6]	T	A	1.402e^-4	0.271	INTERGENIC
2L	5185376	2L_5185376_SNP [dm3] 2L_5185376_SNP [dm6]	C	T	1.409e^-4	0.271	SYNONYMOUS_CODING Msp300 INTRON Msp300	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	19124784	3R_19124784_SNP [dm3] 3R_23299062_SNP [dm6]	T	A	1.409e^-4	0.271	INTRON pnt	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	20651751	3R_20651751_DEL [dm3] 3R_24826029_DEL [dm6]	GATAGCATTCGTCGTGATCC...	G	1.409e^-4	0.271	UPSTREAM niki DOWNSTREAM RabX4 INTRON CG43166	transposable element FlyBase
3R	19500331	3R_19500331_SNP [dm3] 3R_23674609_SNP [dm6]	C	T	1.411e^-4	0.271	INTERGENIC	TF binding site mE1_TFBS_inv
2L	8128338	2L_8128338_SNP [dm3] 2L_8128338_SNP [dm6]	G	A	1.412e^-4	0.271	INTRON CG8668	TF binding site BDTNP1_TFBS_dl
2L	12250747	2L_12250747_SNP [dm3] 2L_12250747_SNP [dm6]	A	C	1.412e^-4	0.271	INTRON aret
3R	12606965	3R_12606965_SNP [dm3] 3R_16781243_SNP [dm6]	G	T	1.412e^-4	0.271	INTERGENIC
2L	21935017	2L_21935017_SNP [dm3] 2L_21935017_SNP [dm6]	A	C	1.417e^-4	0.271	INTERGENIC
2R	6534206	2R_6534206_SNP [dm3] 2R_10646701_SNP [dm6]	C	A	1.418e^-4	0.271	NON_SYNONYMOUS_CODING Elp2	TF binding site mE1_TFBS_sens
X	1568039	X_1568039_INS [dm3] X_1674006_INS [dm6]	G	GTTAG	1.418e^-4	0.271	UTR_3_PRIME CG32809 DOWNSTREAM hfw
3L	13357037	3L_13357037_SNP [dm3] 3L_13363937_SNP [dm6]	G	A	1.419e^-4	0.271	INTERGENIC
2L	8886920	2L_8886920_SNP [dm3] 2L_8886920_SNP [dm6]	A	G	1.420e^-4	0.271	DOWNSTREAM CR44415 EXON CR44415	TF binding site mE1_TFBS_cnc
2L	3974112	2L_3974112_SNP [dm3] 2L_3974112_SNP [dm6]	A	C	1.421e^-4	0.271	INTRON fred	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	16877705	2L_16877705_SNP [dm3] 2L_16877705_SNP [dm6]	C	T	1.421e^-4	0.271	DOWNSTREAM CG32832 EXON CR31781	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	1992654	2L_1992654_SNP [dm3] 2L_1992654_SNP [dm6]	C	T	1.422e^-4	0.271	UPSTREAM Obp22a INTERGENIC
3L	21352995	3L_21352995_DEL [dm3] 3L_21359895_DEL [dm6]	AGA	A	1.422e^-4	0.271	UPSTREAM CG32440 DOWNSTREAM CG32437 INTERGENIC
3R	20663243	3R_20663243_SNP [dm3] 3R_24837521_SNP [dm6]	T	A	1.424e^-4	0.271	INTRON sosie
X	3876130	X_3876130_SNP [dm3] X_3982097_SNP [dm6]	T	G	1.424e^-4	0.271	INTERGENIC
3R	22529127	3R_22529127_SNP [dm3] 3R_26703405_SNP [dm6]	A	G	1.428e^-4	0.271	INTRON amon
2R	18496279	2R_18496279_SNP [dm3] 2R_22608774_SNP [dm6]	C	T	1.429e^-4	0.271	SYNONYMOUS_CODING Vps20 DOWNSTREAM RpS16 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2L	10544428	2L_10544428_SNP [dm3] 2L_10544428_SNP [dm6]	G	C	1.433e^-4	0.272	UPSTREAM CR44618 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
2L	2602116	2L_2602116_DEL [dm3] 2L_2602116_DEL [dm6]	TT	T	1.435e^-4	0.272	UPSTREAM CR44789 INTERGENIC
2L	6477629	2L_6477629_SNP [dm3] 2L_6477629_SNP [dm6]	A	G	1.437e^-4	0.272	UTR_3_PRIME Sec61alpha UPSTREAM CG9536	TF binding site mE1_TFBS_HSA
3L	6293695	3L_6293695_INS [dm3] 3L_6300595_INS [dm6]	A	AAAAAAAAC	1.441e^-4	0.272	INTERGENIC	TF binding site mE1_TFBS_HSA
2L	13074618	2L_13074618_DEL [dm3] 2L_13074618_DEL [dm6]	TG	T	1.441e^-4	0.272	INTERGENIC
2L	7222594	2L_7222594_SNP [dm3] 2L_7222594_SNP [dm6]	A	G	1.441e^-4	0.272	SYNONYMOUS_CODING ico DOWNSTREAM Ndae1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2L	2634907	2L_2634907_SNP [dm3] 2L_2634907_SNP [dm6]	G	A	1.443e^-4	0.272	INTERGENIC
2R	7483650	2R_7483650_SNP [dm3] 2R_11596145_SNP [dm6]	C	G	1.444e^-4	0.272	INTRON tou	TF binding site BDTNP1_TFBS_twi
2L	2958779	2L_2958779_SNP [dm3] 2L_2958779_SNP [dm6]	C	T	1.448e^-4	0.272	UPSTREAM Rbp9 INTRON Rbp9	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	18250807	3R_18250807_SNP [dm3] 3R_22425085_SNP [dm6]	G	A	1.449e^-4	0.272	UPSTREAM pinta DOWNSTREAM CG13847 INTERGENIC
2L	12428152	2L_12428152_SNP [dm3] 2L_12428152_SNP [dm6]	G	C	1.451e^-4	0.272	NON_SYNONYMOUS_CODING CG6388 UPSTREAM CG5446	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad

Missing results

By genomic position
Variant impact
Gene name

SegregVariants_2L phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results