DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=4.603e^-7)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

1904 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
2L	8523873	2L_8523873_SNP [dm3] 2L_8523873_SNP [dm6]	A	C	1.405e^-8	0.026	SYNONYMOUS_CODING Acer	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	8524383	2L_8524383_SNP [dm3] 2L_8524383_SNP [dm6]	C	T	4.199e^-8	0.027	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	8523948	2L_8523948_SNP [dm3] 2L_8523948_SNP [dm6]	G	C	4.391e^-8	0.027	SYNONYMOUS_CODING Acer	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8521633	2L_8521633_SNP [dm3] 2L_8521633_SNP [dm6]	G	A	9.000e^-8	0.042	UTR_3_PRIME CG13091 UPSTREAM Acer	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2L	8523117	2L_8523117_SNP [dm3] 2L_8523117_SNP [dm6]	A	G	1.279e^-7	0.042	INTRON Acer	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
2L	8524906	2L_8524906_SNP [dm3] 2L_8524906_SNP [dm6]	C	A	1.335e^-7	0.042	UTR_3_PRIME Acer DOWNSTREAM lmgA & 2 others
3R	18535684	3R_18535684_SNP [dm3] 3R_22709962_SNP [dm6]	T	C	1.763e^-7	0.047	NON_SYNONYMOUS_CODING CG4907 SPLICE_SITE_REGION CG4907 DOWNSTREAM wge	TF binding site BDTNP1_TFBS_twi
2L	8521447	2L_8521447_SNP [dm3] 2L_8521447_SNP [dm6]	C	T	3.796e^-7	0.066	UPSTREAM Acer INTRON CG13091	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_sens mE1_TFBS_Ubx
2L	8523762	2L_8523762_SNP [dm3] 2L_8523762_SNP [dm6]	G	T	3.896e^-7	0.066	SYNONYMOUS_CODING Acer	TF binding site mE1_TFBS_cad
2L	8523105	2L_8523105_SNP [dm3] 2L_8523105_SNP [dm6]	G	C	4.011e^-7	0.066	INTRON Acer	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
2L	8523133	2L_8523133_SNP [dm3] 2L_8523133_SNP [dm6]	G	A	4.011e^-7	0.066	INTRON Acer	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
2L	8521314	2L_8521314_SNP [dm3] 2L_8521314_SNP [dm6]	G	C	4.664e^-7	0.066	NON_SYNONYMOUS_CODING CG13091 UPSTREAM Acer	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_sens mE1_TFBS_Ubx
2L	8528842	2L_8528842_SNP [dm3] 2L_8528842_SNP [dm6]	T	G	4.733e^-7	0.066	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8528846	2L_8528846_SNP [dm3] 2L_8528846_SNP [dm6]	T	A	4.905e^-7	0.066	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8529077	2L_8529077_SNP [dm3] 2L_8529077_SNP [dm6]	G	C	6.693e^-7	0.074	UPSTREAM CG17834 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8528865	2L_8528865_SNP [dm3] 2L_8528865_SNP [dm6]	C	T	6.710e^-7	0.074	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8528881	2L_8528881_SNP [dm3] 2L_8528881_SNP [dm6]	A	G	6.710e^-7	0.074	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8525014	2L_8525014_SNP [dm3] 2L_8525014_SNP [dm6]	A	T	7.642e^-7	0.08	UTR_3_PRIME Acer & 2 others DOWNSTREAM lmgA & 2 others
2L	8529062	2L_8529062_SNP [dm3] 2L_8529062_SNP [dm6]	C	T	8.611e^-7	0.084	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8521332	2L_8521332_SNP [dm3] 2L_8521332_SNP [dm6]	A	C	8.935e^-7	0.084	SYNONYMOUS_CODING CG13091 UPSTREAM Acer	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_sens mE1_TFBS_Ubx
2L	8520129	2L_8520129_SNP [dm3] 2L_8520129_SNP [dm6]	C	G	9.530e^-7	0.085	SYNONYMOUS_CODING CG13091 DOWNSTREAM CG13090	TF binding site mE1_TFBS_chinmo
2L	8522458	2L_8522458_SNP [dm3] 2L_8522458_SNP [dm6]	T	C	1.083e^-6	0.092	SYNONYMOUS_CODING Acer DOWNSTREAM CG13091	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	8524563	2L_8524563_SNP [dm3] 2L_8524563_SNP [dm6]	G	T	1.280e^-6	0.1	NON_SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad
2L	8523852	2L_8523852_SNP [dm3] 2L_8523852_SNP [dm6]	C	G	1.329e^-6	0.1	NON_SYNONYMOUS_CODING Acer	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	17612492	3R_17612492_SNP [dm3] 3R_21786770_SNP [dm6]	A	G	1.330e^-6	0.1	SYNONYMOUS_CODING CASK UPSTREAM CRG
2L	8527696	2L_8527696_SNP [dm3] 2L_8527696_SNP [dm6]	C	T	1.474e^-6	0.106	SYNONYMOUS_CODING lmgB UTR_3_PRIME lmgA DOWNSTREAM lmgA	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8528818	2L_8528818_SNP [dm3] 2L_8528818_SNP [dm6]	A	C	1.700e^-6	0.118	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8527621	2L_8527621_SNP [dm3] 2L_8527621_SNP [dm6]	T	C	1.838e^-6	0.123	SYNONYMOUS_CODING lmgB UTR_3_PRIME lmgA DOWNSTREAM lmgA	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8520294	2L_8520294_SNP [dm3] 2L_8520294_SNP [dm6]	G	A	2.096e^-6	0.13	SYNONYMOUS_CODING CG13091	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2L	8528825	2L_8528825_SNP [dm3] 2L_8528825_SNP [dm6]	C	T	2.103e^-6	0.13	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8520050	2L_8520050_SNP [dm3] 2L_8520050_SNP [dm6]	T	C	2.201e^-6	0.13	DOWNSTREAM CG13090 INTRON CG13091	TF binding site mE1_TFBS_chinmo
3R	17612528	3R_17612528_SNP [dm3] 3R_21786806_SNP [dm6]	G	A	2.215e^-6	0.13	SYNONYMOUS_CODING CASK UPSTREAM CRG
2L	8512026	2L_8512026_SNP [dm3] 2L_8512026_SNP [dm6]	G	A	2.819e^-6	0.157	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
3R	17612474	3R_17612474_SNP [dm3] 3R_21786752_SNP [dm6]	G	T	2.837e^-6	0.157	SYNONYMOUS_CODING CASK UPSTREAM CRG
2L	8529069	2L_8529069_SNP [dm3] 2L_8529069_SNP [dm6]	T	C	3.032e^-6	0.163	UPSTREAM CG17834 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	8521004	2L_8521004_SNP [dm3] 2L_8521004_SNP [dm6]	C	A	3.305e^-6	0.17	NON_SYNONYMOUS_CODING CG13091 UPSTREAM Acer	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_sens
2L	2617570	2L_2617570_SNP [dm3] 2L_2617570_SNP [dm6]	T	C	3.361e^-6	0.17	INTERGENIC
2L	8524462	2L_8524462_SNP [dm3] 2L_8524462_SNP [dm6]	C	T	4.217e^-6	0.208	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	25790726	3R_25790726_INS [dm3] 3R_29965004_INS [dm6]	G	GTG	4.407e^-6	0.211	INTRON TkR99D
X	16051095	X_16051095_SNP [dm3] X_16157062_SNP [dm6]	C	G	4.562e^-6	0.211	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	13477342	X_13477342_SNP [dm3] X_13583309_SNP [dm6]	T	G	4.693e^-6	0.211	INTRON Tango13
2L	8524323	2L_8524323_SNP [dm3] 2L_8524323_SNP [dm6]	T	C	4.831e^-6	0.211	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	8522486	2L_8522486_SNP [dm3] 2L_8522486_SNP [dm6]	T	C	4.879e^-6	0.211	SYNONYMOUS_CODING Acer DOWNSTREAM CG13091	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	14330647	3L_14330647_SNP [dm3] 3L_14337547_SNP [dm6]	A	G	5.033e^-6	0.211	INTRON fz
2L	8513188	2L_8513188_SNP [dm3] 2L_8513188_SNP [dm6]	A	G	5.058e^-6	0.211	SYNONYMOUS_CODING CG13097	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	8524326	2L_8524326_SNP [dm3] 2L_8524326_SNP [dm6]	C	T	5.688e^-6	0.228	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	8524431	2L_8524431_SNP [dm3] 2L_8524431_SNP [dm6]	A	T	5.707e^-6	0.228	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	5969915	X_5969915_SNP [dm3] X_6075882_SNP [dm6]	C	G	6.314e^-6	0.247	DOWNSTREAM CG4666 INTERGENIC
2L	8517836	2L_8517836_SNP [dm3] 2L_8517836_SNP [dm6]	A	G	6.864e^-6	0.25	NON_SYNONYMOUS_CODING CG13090 UPSTREAM mRpL51	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	8510992	2L_8510992_SNP [dm3] 2L_8510992_SNP [dm6]	G	T	6.883e^-6	0.25	SYNONYMOUS_CODING CG13096	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8517273	2L_8517273_SNP [dm3] 2L_8517273_SNP [dm6]	A	G	6.888e^-6	0.25	NON_SYNONYMOUS_CODING mRpL51 UPSTREAM CG13090 DOWNSTREAM PIG-U	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2L	12157460	2L_12157460_SNP [dm3] 2L_12157460_SNP [dm6]	C	G	7.170e^-6	0.25	INTRON CG31760
2L	8513770	2L_8513770_SNP [dm3] 2L_8513770_SNP [dm6]	G	A	7.261e^-6	0.25	SYNONYMOUS_CODING CG13097	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8513779	2L_8513779_SNP [dm3] 2L_8513779_SNP [dm6]	T	C	7.261e^-6	0.25	SYNONYMOUS_CODING CG13097	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8514811	2L_8514811_SNP [dm3] 2L_8514811_SNP [dm6]	C	T	7.344e^-6	0.25	UTR_5_PRIME CG13097 UPSTREAM PIG-U	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	19511977	3L_19511977_SNP [dm3] 3L_19518877_SNP [dm6]	T	A	7.509e^-6	0.252	UPSTREAM Cpr76Ba & 1 other INTERGENIC
2L	10515699	2L_10515699_SNP [dm3] 2L_10515699_SNP [dm6]	G	T	8.081e^-6	0.263	INTRON Fatp & 1 other
2L	8529111	2L_8529111_SNP [dm3] 2L_8529111_SNP [dm6]	A	G	8.120e^-6	0.263	UPSTREAM CG17834 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	4623064	2L_4623064_SNP [dm3] 2L_4623064_SNP [dm6]	C	T	8.753e^-6	0.278	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	1706828	3R_1706828_SNP [dm3] 3R_5881106_SNP [dm6]	G	C	9.181e^-6	0.287	INTRON CG34113	TF binding site mE1_TFBS_cad
3R	2457128	3R_2457128_SNP [dm3] 3R_6631406_SNP [dm6]	C	G	9.796e^-6	0.301	DOWNSTREAM sunz INTERGENIC
3L	14330714	3L_14330714_SNP [dm3] 3L_14337614_SNP [dm6]	T	A	9.973e^-6	0.302	INTRON fz
X	16051099	X_16051099_SNP [dm3] X_16157066_SNP [dm6]	T	C	1.109e^-5	0.33	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	8528886	2L_8528886_SNP [dm3] 2L_8528886_SNP [dm6]	T	C	1.179e^-5	0.343	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	25761459	3R_25761459_SNP [dm3] 3R_29935737_SNP [dm6]	A	G	1.188e^-5	0.343	SPLICE_SITE_REGION eIF2B-alpha UPSTREAM CG15523 INTRON eIF2B-alpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	25772060	3R_25772060_SNP [dm3] 3R_29946338_SNP [dm6]	G	A	1.233e^-5	0.351	SYNONYMOUS_CODING CG15523	TF binding site mE1_TFBS_cad
2L	8513479	2L_8513479_SNP [dm3] 2L_8513479_SNP [dm6]	G	A	1.270e^-5	0.351	SYNONYMOUS_CODING CG13097	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8515387	2L_8515387_SNP [dm3] 2L_8515387_SNP [dm6]	C	T	1.272e^-5	0.351	SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	25761377	3R_25761377_SNP [dm3] 3R_29935655_SNP [dm6]	T	G	1.332e^-5	0.362	SYNONYMOUS_CODING eIF2B-alpha UPSTREAM CG15523	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	20411855	3R_20411855_SNP [dm3] 3R_24586133_SNP [dm6]	C	G	1.369e^-5	0.367	UPSTREAM CG13625 INTRON mld	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_Trl
3L	1264293	3L_1264293_SNP [dm3] 3L_1264293_SNP [dm6]	C	T	1.408e^-5	0.372	INTRON CG9134
3R	2457129	3R_2457129_SNP [dm3] 3R_6631407_SNP [dm6]	A	C	1.653e^-5	0.431	DOWNSTREAM sunz INTERGENIC
3R	25786776	3R_25786776_SNP [dm3] 3R_29961054_SNP [dm6]	G	C	1.719e^-5	0.442	INTRON TkR99D
2L	8520273	2L_8520273_SNP [dm3] 2L_8520273_SNP [dm6]	T	C	1.816e^-5	0.46	SYNONYMOUS_CODING CG13091	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	26604971	3R_26604971_SNP [dm3] 3R_30779249_SNP [dm6]	G	A	1.885e^-5	0.471	INTRON zfh1
2L	8513167	2L_8513167_SNP [dm3] 2L_8513167_SNP [dm6]	C	T	1.923e^-5	0.475	SYNONYMOUS_CODING CG13097	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3R	21182073	3R_21182073_SNP [dm3] 3R_25356351_SNP [dm6]	G	T	1.979e^-5	0.482	INTRON Fur1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	22536985	3R_22536985_SNP [dm3] 3R_26711263_SNP [dm6]	G	T	2.043e^-5	0.491	INTRON amon
2L	3698510	2L_3698510_DEL [dm3] 2L_3698510_DEL [dm6]	AA	A	2.084e^-5	0.495	UTR_3_PRIME CG10031 UPSTREAM CG3604 & 1 other
2L	8515461	2L_8515461_SNP [dm3] 2L_8515461_SNP [dm6]	T	C	2.136e^-5	0.501	SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	20163982	3R_20163982_SNP [dm3] 3R_24338260_SNP [dm6]	A	G	2.262e^-5	0.515	NON_SYNONYMOUS_CODING CG6432 UPSTREAM mir-1015	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	10427903	2L_10427903_SNP [dm3] 2L_10427903_SNP [dm6]	G	A	2.295e^-5	0.515	UTR_3_PRIME KdelR UPSTREAM CG5188
2L	8507808	2L_8507808_SNP [dm3] 2L_8507808_SNP [dm6]	C	A	2.304e^-5	0.515	UPSTREAM Dh31 INTERGENIC
2L	8515362	2L_8515362_SNP [dm3] 2L_8515362_SNP [dm6]	T	G	2.365e^-5	0.515	SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	10515453	2L_10515453_SNP [dm3] 2L_10515453_SNP [dm6]	C	T	2.389e^-5	0.515	INTRON Fatp & 1 other
2L	8526126	2L_8526126_SNP [dm3] 2L_8526126_SNP [dm6]	T	G	2.401e^-5	0.515	UTR_3_PRIME lmgB & 1 other DOWNSTREAM lmgA & 2 others
3R	21261011	3R_21261011_SNP [dm3] 3R_25435289_SNP [dm6]	C	G	2.403e^-5	0.515	INTRON Fur1
3L	8648455	3L_8648455_DEL [dm3] 3L_8655355_DEL [dm6]	AAGTATATCAA...	A	2.441e^-5	0.515	INTERGENIC	TF binding site mE1_TFBS_cad
3L	4003181	3L_4003181_SNP [dm3] 3L_4003181_SNP [dm6]	G	A	2.470e^-5	0.515	UPSTREAM CG14985 INTERGENIC
3R	8213268	3R_8213268_DEL [dm3] 3R_12387546_DEL [dm6]	AGCTA	A	2.473e^-5	0.515	UTR_5_PRIME CG33098 UPSTREAM CG33098 INTRON CG34402	TF binding site mE1_TFBS_cad
X	5509404	X_5509404_SNP [dm3] X_5615371_SNP [dm6]	C	A	2.578e^-5	0.529	NON_SYNONYMOUS_CODING CG34434 UPSTREAM CG34435
3R	22025796	3R_22025796_SNP [dm3] 3R_26200074_SNP [dm6]	C	T	2.637e^-5	0.529	INTRON CR44320	TF binding site BDTNP1_TFBS_twi
2L	3930316	2L_3930316_SNP [dm3] 2L_3930316_SNP [dm6]	T	A	2.677e^-5	0.529	INTRON fred
3L	13682618	3L_13682618_INS [dm3] 3L_13689518_INS [dm6]	A	AACTGGGCA	2.682e^-5	0.529	INTRON bru-3	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	8515658	2L_8515658_SNP [dm3] 2L_8515658_SNP [dm6]	G	A	2.693e^-5	0.529	NON_SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_sens
2R	7743542	2R_7743542_SNP [dm3] 2R_11856037_SNP [dm6]	T	C	2.735e^-5	0.529	SYNONYMOUS_CODING Mtor	TF binding site mE1_TFBS_cad
3R	25764013	3R_25764013_SNP [dm3] 3R_29938291_SNP [dm6]	T	C	2.735e^-5	0.529	SYNONYMOUS_CODING CG15523 UTR_3_PRIME CG15523
3R	25761316	3R_25761316_DEL [dm3] 3R_29935594_DEL [dm6]	TT	T	2.809e^-5	0.538	UPSTREAM CG15523 INTRON eIF2B-alpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	985082	2L_985082_SNP [dm3] 2L_985082_SNP [dm6]	G	A	2.942e^-5	0.552	INTERGENIC
2L	263485	2L_263485_SNP [dm3] 2L_263485_SNP [dm6]	A	C	2.968e^-5	0.552	UTR_3_PRIME CG17075 DOWNSTREAM CR44219 INTRON CG3645	TF binding site mE1_TFBS_cad
3L	12374579	3L_12374579_SNP [dm3] 3L_12381479_SNP [dm6]	G	A	2.972e^-5	0.552	INTRON Ncc69	TF binding site mE1_TFBS_inv
3R	23022406	3R_23022406_SNP [dm3] 3R_27196684_SNP [dm6]	T	C	3.082e^-5	0.557	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2L	10515532	2L_10515532_SNP [dm3] 2L_10515532_SNP [dm6]	C	T	3.145e^-5	0.557	INTRON Fatp & 1 other
3R	10187618	3R_10187618_SNP [dm3] 3R_14361896_SNP [dm6]	T	C	3.162e^-5	0.557	UPSTREAM CG31320 INTRON NK7.1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	13312215	3L_13312215_SNP [dm3] 3L_13319115_SNP [dm6]	G	A	3.169e^-5	0.557	INTERGENIC
2L	8514725	2L_8514725_SNP [dm3] 2L_8514725_SNP [dm6]	C	T	3.198e^-5	0.557	SYNONYMOUS_CODING CG13097 UPSTREAM PIG-U	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2R	3213375	2R_3213375_SNP [dm3] 2R_7325870_SNP [dm6]	C	G	3.218e^-5	0.557	UPSTREAM CR45129 INTRON Dscam1	TF binding site BDTNP1_TFBS_dl
3R	25502011	3R_25502011_SNP [dm3] 3R_29676289_SNP [dm6]	G	A	3.263e^-5	0.557	SYNONYMOUS_CODING Cap-D2 UPSTREAM Bub3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3L	14331242	3L_14331242_SNP [dm3] 3L_14338142_SNP [dm6]	C	G	3.278e^-5	0.557	INTRON fz	TF binding site BDTNP1_TFBS_dl
2L	8525164	2L_8525164_SNP [dm3] 2L_8525164_SNP [dm6]	C	T	3.341e^-5	0.557	UTR_3_PRIME Acer & 2 others DOWNSTREAM lmgA & 2 others
2L	8512136	2L_8512136_INS [dm3] 2L_8512136_INS [dm6]	A	AAAACATTAACATATTAACT...	3.361e^-5	0.557	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
3L	12097294	3L_12097294_SNP [dm3] 3L_12104194_SNP [dm6]	A	C	3.372e^-5	0.557	INTERGENIC
3R	18252460	3R_18252460_SNP [dm3] 3R_22426738_SNP [dm6]	A	G	3.379e^-5	0.557	SPLICE_SITE_REGION CG13847 INTRON CG13847	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	6898844	2L_6898844_SNP [dm3] 2L_6898844_SNP [dm6]	T	C	3.382e^-5	0.557	INTRON Nlg2
2R	2678465	2R_2678465_SNP [dm3] 2R_6790960_SNP [dm6]	A	G	3.429e^-5	0.559	INTRON Epac
3L	6358096	3L_6358096_SNP [dm3] 3L_6364996_SNP [dm6]	C	G	3.520e^-5	0.569	INTERGENIC
3R	1713448	3R_1713448_INS [dm3] 3R_5887726_INS [dm6]	A	ATACA	3.706e^-5	0.588	INTRON CG34113
2L	8520157	2L_8520157_SNP [dm3] 2L_8520157_SNP [dm6]	C	A	3.778e^-5	0.588	NON_SYNONYMOUS_CODING CG13091 DOWNSTREAM CG13090	TF binding site mE1_TFBS_chinmo
3R	25776759	3R_25776759_SNP [dm3] 3R_29951037_SNP [dm6]	A	C	3.792e^-5	0.588	UTR_3_PRIME TkR99D
X	20396950	X_20396950_SNP [dm3] X_20525923_SNP [dm6]	C	A	3.813e^-5	0.588	UPSTREAM Tak1 INTERGENIC	transposable element FlyBase
2L	3930320	2L_3930320_SNP [dm3] 2L_3930320_SNP [dm6]	C	A	3.813e^-5	0.588	INTRON fred
3R	19115656	3R_19115656_SNP [dm3] 3R_23289934_SNP [dm6]	C	T	3.850e^-5	0.588	SYNONYMOUS_CODING CG4434 DOWNSTREAM pnt
X	5747918	X_5747918_SNP [dm3] X_5853885_SNP [dm6]	A	G	3.879e^-5	0.588	SYNONYMOUS_CODING CG43136
3R	25993140	3R_25993140_SNP [dm3] 3R_30167418_SNP [dm6]	A	C	3.887e^-5	0.588	NON_SYNONYMOUS_CODING CG31028 UPSTREAM CG31030
2L	8512119	2L_8512119_INS [dm3] 2L_8512119_INS [dm6]	T	TATTAGTAGAGACAGAC...	4.028e^-5	0.598	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
3R	25771996	3R_25771996_SNP [dm3] 3R_29946274_SNP [dm6]	A	G	4.077e^-5	0.598	NON_SYNONYMOUS_CODING CG15523
3R	25772012	3R_25772012_SNP [dm3] 3R_29946290_SNP [dm6]	C	T	4.077e^-5	0.598	SYNONYMOUS_CODING CG15523
2L	19248240	2L_19248240_SNP [dm3] 2L_19248240_SNP [dm6]	G	T	4.080e^-5	0.598	INTERGENIC
3R	23022381	3R_23022381_SNP [dm3] 3R_27196659_SNP [dm6]	A	T	4.117e^-5	0.599	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Kr
3R	1706794	3R_1706794_SNP [dm3] 3R_5881072_SNP [dm6]	C	T	4.159e^-5	0.6	INTRON CG34113	TF binding site mE1_TFBS_cad
3R	14846613	3R_14846613_SNP [dm3] 3R_19020891_SNP [dm6]	A	C	4.222e^-5	0.604	DOWNSTREAM gukh INTRON gukh	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	677106	2L_677106_SNP [dm3] 2L_677106_SNP [dm6]	A	G	4.285e^-5	0.609	INTRON ds	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	8515266	2L_8515266_SNP [dm3] 2L_8515266_SNP [dm6]	A	G	4.478e^-5	0.623	SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	3930297	2L_3930297_SNP [dm3] 2L_3930297_SNP [dm6]	A	C	4.506e^-5	0.623	INTRON fred
3R	23022388	3R_23022388_SNP [dm3] 3R_27196666_SNP [dm6]	G	A	4.519e^-5	0.623	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Kr
3L	5903378	3L_5903378_SNP [dm3] 3L_5910278_SNP [dm6]	C	T	4.558e^-5	0.623	DOWNSTREAM CG13288 INTRON CG13288
2L	262825	2L_262825_SNP [dm3] 2L_262825_SNP [dm6]	C	A	4.568e^-5	0.623	UTR_3_PRIME CG17075 DOWNSTREAM CG17075 INTRON CG3645 EXON CR44219
2L	8515386	2L_8515386_SNP [dm3] 2L_8515386_SNP [dm6]	T	C	4.615e^-5	0.623	SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	262249	2L_262249_SNP [dm3] 2L_262249_SNP [dm6]	A	T	4.636e^-5	0.623	UTR_3_PRIME CG17075 INTRON CG3645 EXON CR44219
3R	26066816	3R_26066816_SNP [dm3] 3R_30241094_SNP [dm6]	T	A	4.675e^-5	0.623	DOWNSTREAM CG9737 INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	8524608	2L_8524608_SNP [dm3] 2L_8524608_SNP [dm6]	C	T	4.735e^-5	0.623	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad
3R	10187619	3R_10187619_SNP [dm3] 3R_14361897_SNP [dm6]	G	T	4.737e^-5	0.623	UPSTREAM CG31320 INTRON NK7.1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	14119803	2R_14119803_SNP [dm3] 2R_18232298_SNP [dm6]	C	T	4.773e^-5	0.623	UPSTREAM fj INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	2495256	3R_2495256_SNP [dm3] 3R_6669534_SNP [dm6]	T	G	4.784e^-5	0.623	INTRON lab	regulatory region FlyBase REDfly_CRMs
2L	8510360	2L_8510360_SNP [dm3] 2L_8510360_SNP [dm6]	T	A	4.847e^-5	0.627	INTRON CG13096	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	25751604	3R_25751604_SNP [dm3] 3R_29925882_SNP [dm6]	G	A	4.918e^-5	0.632	INTRON Jon99Ci
3R	14846608	3R_14846608_SNP [dm3] 3R_19020886_SNP [dm6]	T	A	5.127e^-5	0.648	DOWNSTREAM gukh INTRON gukh	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	16078640	2R_16078640_SNP [dm3] 2R_20191135_SNP [dm6]	C	G	5.137e^-5	0.648	INTERGENIC
2L	3930304	2L_3930304_SNP [dm3] 2L_3930304_SNP [dm6]	A	C	5.144e^-5	0.648	INTRON fred
X	3167412	X_3167412_SNP [dm3] X_3273379_SNP [dm6]	G	A	5.314e^-5	0.664	INTRON dnc
2L	8515377	2L_8515377_SNP [dm3] 2L_8515377_SNP [dm6]	T	C	5.384e^-5	0.669	SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	8522146	3L_8522146_SNP [dm3] 3L_8529046_SNP [dm6]	T	A	5.498e^-5	0.67	INTRON foi
2L	8617828	2L_8617828_SNP [dm3] 2L_8617828_SNP [dm6]	C	T	5.540e^-5	0.67	INTRON Sema-1a
2L	8525183	2L_8525183_SNP [dm3] 2L_8525183_SNP [dm6]	G	T	5.606e^-5	0.67	UTR_3_PRIME Acer & 2 others DOWNSTREAM lmgA & 2 others
3L	7997859	3L_7997859_SNP [dm3] 3L_8004759_SNP [dm6]	A	T	5.607e^-5	0.67	INTRON nmo
3R	1701313	3R_1701313_SNP [dm3] 3R_5875591_SNP [dm6]	C	T	5.639e^-5	0.67	INTRON CG34113
2L	4400596	2L_4400596_SNP [dm3] 2L_4400596_SNP [dm6]	T	G	5.648e^-5	0.67	UPSTREAM CG33003 DOWNSTREAM l_2_k05819 INTERGENIC
3R	18535783	3R_18535783_SNP [dm3] 3R_22710061_SNP [dm6]	T	A	5.653e^-5	0.67	NON_SYNONYMOUS_CODING CG4907 DOWNSTREAM wge	TF binding site BDTNP1_TFBS_twi mE1_TFBS_sens
X	15731771	X_15731771_SNP [dm3] X_15837738_SNP [dm6]	T	G	5.681e^-5	0.67	UPSTREAM CG8565 DOWNSTREAM CG32582 INTERGENIC
3R	13906841	3R_13906841_SNP [dm3] 3R_18081119_SNP [dm6]	C	T	5.744e^-5	0.673	UTR_5_PRIME CG14317	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	13898549	3R_13898549_SNP [dm3] 3R_18072827_SNP [dm6]	T	G	5.802e^-5	0.675	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	10515724	2L_10515724_SNP [dm3] 2L_10515724_SNP [dm6]	C	G	5.829e^-5	0.675	INTRON Fatp & 1 other
3R	25761338	3R_25761338_SNP [dm3] 3R_29935616_SNP [dm6]	T	C	5.886e^-5	0.677	UPSTREAM CG15523 INTRON eIF2B-alpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	14523152	3L_14523152_SNP [dm3] 3L_14530052_SNP [dm6]	C	T	5.999e^-5	0.685	INTRON bbg
3L	14330298	3L_14330298_SNP [dm3] 3L_14337198_SNP [dm6]	G	T	6.037e^-5	0.685	INTRON fz
2L	3813093	2L_3813093_SNP [dm3] 2L_3813093_SNP [dm6]	T	C	6.073e^-5	0.685	SYNONYMOUS_CODING CG3407	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	25973777	3R_25973777_SNP [dm3] 3R_30148055_SNP [dm6]	G	C	6.140e^-5	0.685	INTRON AdoR
3R	25777085	3R_25777085_SNP [dm3] 3R_29951363_SNP [dm6]	G	A	6.165e^-5	0.685	UTR_3_PRIME TkR99D	TF binding site mE1_TFBS_chinmo
3R	25770433	3R_25770433_SNP [dm3] 3R_29944711_SNP [dm6]	C	T	6.168e^-5	0.685	NON_SYNONYMOUS_CODING CG15523
3L	4003125	3L_4003125_SNP [dm3] 3L_4003125_SNP [dm6]	G	T	6.253e^-5	0.69	UPSTREAM CG14985 INTERGENIC
3L	5560458	3L_5560458_SNP [dm3] 3L_5567358_SNP [dm6]	T	C	6.485e^-5	0.707	UTR_3_PRIME Msr-110 DOWNSTREAM bc10 & 1 other
3R	21183471	3R_21183471_INS [dm3] 3R_25357749_INS [dm6]	G	GAA	6.505e^-5	0.707	UPSTREAM CG11913 INTRON Fur1
2R	18595000	2R_18595000_SNP [dm3] 2R_22707495_SNP [dm6]	A	G	6.521e^-5	0.707	SYNONYMOUS_CODING Obp58d UPSTREAM Obp58c & 1 other DOWNSTREAM CR43735
2L	9084599	2L_9084599_SNP [dm3] 2L_9084599_SNP [dm6]	G	A	6.557e^-5	0.707	INTRON Toll-4
2L	6901540	2L_6901540_SNP [dm3] 2L_6901540_SNP [dm6]	G	C	6.606e^-5	0.708	UPSTREAM mir-932 INTRON Nlg2
2L	17419353	2L_17419353_SNP [dm3] 2L_17419353_SNP [dm6]	A	T	6.825e^-5	0.725	INTRON Dif
3R	21183473	3R_21183473_SNP [dm3] 3R_25357751_SNP [dm6]	T	A	6.845e^-5	0.725	UPSTREAM CG11913 INTRON Fur1
2L	8512102	2L_8512102_SNP [dm3] 2L_8512102_SNP [dm6]	T	C	6.961e^-5	0.732	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
3R	21183488	3R_21183488_SNP [dm3] 3R_25357766_SNP [dm6]	C	T	6.982e^-5	0.732	UPSTREAM CG11913 INTRON Fur1
2L	8512024	2L_8512024_SNP [dm3] 2L_8512024_SNP [dm6]	T	G	7.039e^-5	0.734	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
2L	2464258	2L_2464258_SNP [dm3] 2L_2464258_SNP [dm6]	C	A	7.095e^-5	0.735	INTERGENIC	enhancer FlyBase TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2R	7349462	2R_7349462_SNP [dm3] 2R_11461957_SNP [dm6]	C	A	7.159e^-5	0.738	UTR_3_PRIME E_Pc_	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	8424196	3L_8424196_SNP [dm3] 3L_8431096_SNP [dm6]	A	G	7.203e^-5	0.738	UTR_3_PRIME Cbl
X	5485775	X_5485775_DEL [dm3] X_5591742_DEL [dm6]	ATA	A	7.439e^-5	0.758	INTERGENIC
2L	8512125	2L_8512125_INS [dm3] 2L_8512125_INS [dm6]	T	TCGATTCAAACTCATGCTAA...	7.559e^-5	0.766	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
2R	17150778	2R_17150778_SNP [dm3] 2R_21263273_SNP [dm6]	T	A	7.637e^-5	0.769	INTRON Rgk3
2R	15593338	2R_15593338_SNP [dm3] 2R_19705833_SNP [dm6]	A	G	7.668e^-5	0.769	INTERGENIC	regulatory region REDfly_CRMs
3L	11177440	3L_11177440_SNP [dm3] 3L_11184340_SNP [dm6]	G	C	7.732e^-5	0.769	INTRON GlcAT-P
3R	18252478	3R_18252478_SNP [dm3] 3R_22426756_SNP [dm6]	A	T	7.744e^-5	0.769	INTRON CG13847	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8510267	2L_8510267_SNP [dm3] 2L_8510267_SNP [dm6]	C	T	7.794e^-5	0.769	INTRON CG13096	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	3757763	2L_3757763_SNP [dm3] 2L_3757763_SNP [dm6]	G	A	8.019e^-5	0.774	UTR_5_PRIME CG43707
2R	16825014	2R_16825014_SNP [dm3] 2R_20937509_SNP [dm6]	C	A	8.022e^-5	0.774	DOWNSTREAM Rx INTERGENIC
2L	2614378	2L_2614378_SNP [dm3] 2L_2614378_SNP [dm6]	T	C	8.037e^-5	0.774	INTERGENIC
2L	9389502	2L_9389502_SNP [dm3] 2L_9389502_SNP [dm6]	C	G	8.040e^-5	0.774	INTRON Shawl & 1 other
2L	8515600	2L_8515600_SNP [dm3] 2L_8515600_SNP [dm6]	T	C	8.047e^-5	0.774	NON_SYNONYMOUS_CODING PIG-U UPSTREAM CG13097	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	19770255	3R_19770255_SNP [dm3] 3R_23944533_SNP [dm6]	G	A	8.133e^-5	0.777	SYNONYMOUS_CODING CG12268	TF binding site mE1_TFBS_cad
3R	25761322	3R_25761322_SNP [dm3] 3R_29935600_SNP [dm6]	T	A	8.159e^-5	0.777	UPSTREAM CG15523 INTRON eIF2B-alpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8512163	2L_8512163_DEL [dm3] 2L_8512163_DEL [dm6]	AA	A	8.288e^-5	0.777	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	8512075	2L_8512075_SNP [dm3] 2L_8512075_SNP [dm6]	A	T	8.363e^-5	0.777	UPSTREAM CG13096 DOWNSTREAM CG13097 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA
3L	18952071	3L_18952071_SNP [dm3] 3L_18958971_SNP [dm6]	T	C	8.416e^-5	0.777	INTERGENIC
3L	19137737	3L_19137737_SNP [dm3] 3L_19144637_SNP [dm6]	G	A	8.467e^-5	0.777	SYNONYMOUS_CODING fz2	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	8640824	3L_8640824_SNP [dm3] 3L_8647724_SNP [dm6]	T	C	8.498e^-5	0.777	SYNONYMOUS_CODING Arr2 UPSTREAM CG13305 INTRON Pex7	TF binding site mE1_TFBS_sens
3R	21183431	3R_21183431_SNP [dm3] 3R_25357709_SNP [dm6]	A	T	8.601e^-5	0.777	UPSTREAM CG11913 INTRON Fur1
3R	21183446	3R_21183446_SNP [dm3] 3R_25357724_SNP [dm6]	C	T	8.601e^-5	0.777	UPSTREAM CG11913 INTRON Fur1
3R	21183536	3R_21183536_DEL [dm3] 3R_25357814_DEL [dm6]	TTTTGC	T	8.601e^-5	0.777	UPSTREAM CG11913 INTRON Fur1
3R	21183555	3R_21183555_DEL [dm3] 3R_25357833_DEL [dm6]	TAA	T	8.601e^-5	0.777	UPSTREAM CG11913 INTRON Fur1
2L	8512797	2L_8512797_SNP [dm3] 2L_8512797_SNP [dm6]	G	T	8.620e^-5	0.777	UPSTREAM CG13096 INTRON CG13097	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	11180837	2L_11180837_SNP [dm3] 2L_11180837_SNP [dm6]	T	C	8.622e^-5	0.777	DOWNSTREAM CG4788 INTRON Ca-beta	TF binding site mE1_TFBS_cad
X	16154780	X_16154780_SNP [dm3] X_16260747_SNP [dm6]	T	A	8.747e^-5	0.781	INTERGENIC
3R	17612837	3R_17612837_SNP [dm3] 3R_21787115_SNP [dm6]	T	G	8.780e^-5	0.781	UPSTREAM CRG INTRON CASK
2R	18795552	2R_18795552_SNP [dm3] 2R_22908029_SNP [dm6]	G	A	8.790e^-5	0.781	INTRON nahoda	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	6496098	X_6496098_SNP [dm3] X_6602065_SNP [dm6]	T	G	8.949e^-5	0.785	UPSTREAM pigs INTRON pigs	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
2L	3596094	2L_3596094_SNP [dm3] 2L_3596094_SNP [dm6]	C	A	8.993e^-5	0.785	INTERGENIC
3R	14945061	3R_14945061_SNP [dm3] 3R_19119339_SNP [dm6]	G	A	9.070e^-5	0.785	INTRON CG6040
2L	8514835	2L_8514835_SNP [dm3] 2L_8514835_SNP [dm6]	A	T	9.090e^-5	0.785	UTR_5_PRIME CG13097 UPSTREAM PIG-U	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
X	17472300	X_17472300_SNP [dm3] X_17578267_SNP [dm6]	G	T	9.101e^-5	0.785	UPSTREAM CR44124 INTRON l_1_G0222	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z
3L	2159586	3L_2159586_SNP [dm3] 3L_2159586_SNP [dm6]	A	T	9.190e^-5	0.785	INTRON CG15822	TF binding site mE1_TFBS_inv
3R	19910238	3R_19910238_SNP [dm3] 3R_24084516_SNP [dm6]	A	G	9.193e^-5	0.785	INTRON 4EHP
2L	262257	2L_262257_SNP [dm3] 2L_262257_SNP [dm6]	T	G	9.193e^-5	0.785	UTR_3_PRIME CG17075 INTRON CG3645 EXON CR44219
3R	17612175	3R_17612175_SNP [dm3] 3R_21786453_SNP [dm6]	T	G	9.213e^-5	0.785	UTR_3_PRIME CASK UPSTREAM CRG
3R	25768239	3R_25768239_SNP [dm3] 3R_29942517_SNP [dm6]	T	A	9.302e^-5	0.788	INTRON CG15523
2R	15378257	2R_15378257_SNP [dm3] 2R_19490752_SNP [dm6]	T	A	9.362e^-5	0.788	INTRON Oseg6	TF binding site mE1_TFBS_inv
3R	26388176	3R_26388176_SNP [dm3] 3R_30562454_SNP [dm6]	G	C	9.438e^-5	0.788	UPSTREAM tmod INTRON tmod	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
2R	17046325	2R_17046325_SNP [dm3] 2R_21158820_SNP [dm6]	A	T	9.468e^-5	0.788	UPSTREAM CG30389 INTRON CG30389	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens mE1_TFBS_Trl
3L	9189300	3L_9189300_SNP [dm3] 3L_9196200_SNP [dm6]	G	A	9.517e^-5	0.788	INTERGENIC
3R	22271116	3R_22271116_SNP [dm3] 3R_26445394_SNP [dm6]	G	A	9.560e^-5	0.788	INTRON tx
3L	10768189	3L_10768189_SNP [dm3] 3L_10775089_SNP [dm6]	T	A	9.568e^-5	0.788	INTERGENIC
2R	7378830	2R_7378830_INS [dm3] 2R_11491325_INS [dm6]	C	CGAC	9.574e^-5	0.788	INTRON inv
2L	8182276	2L_8182276_SNP [dm3] 2L_8182276_SNP [dm6]	G	T	9.701e^-5	0.795	DOWNSTREAM Piezo INTRON Piezo
2L	10904222	2L_10904222_DEL [dm3] 2L_10904222_DEL [dm6]	TT	T	9.791e^-5	0.796	UPSTREAM CR45724 INTERGENIC
3R	17610750	3R_17610750_SNP [dm3] 3R_21785028_SNP [dm6]	A	C	9.806e^-5	0.796	UTR_3_PRIME CASK DOWNSTREAM CASK EXON CRG	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2R	15593947	2R_15593947_SNP [dm3] 2R_19706442_SNP [dm6]	A	T	9.903e^-5	0.801	INTERGENIC	regulatory region REDfly_CRMs
2L	8530374	2L_8530374_SNP [dm3] 2L_8530374_SNP [dm6]	T	C	1.008e^-4	0.808	INTRON CG17834	TF binding site mE1_TFBS_HSA
2L	8510259	2L_8510259_SNP [dm3] 2L_8510259_SNP [dm6]	A	T	1.008e^-4	0.808	INTRON CG13096	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	21183563	3R_21183563_SNP [dm3] 3R_25357841_SNP [dm6]	A	G	1.025e^-4	0.817	UPSTREAM CG11913 INTRON Fur1
2R	16067980	2R_16067980_SNP [dm3] 2R_20180475_SNP [dm6]	T	G	1.031e^-4	0.817	INTERGENIC
X	8553467	X_8553467_SNP [dm3] X_8659434_SNP [dm6]	A	T	1.037e^-4	0.817	INTERGENIC	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2L	8524089	2L_8524089_SNP [dm3] 2L_8524089_SNP [dm6]	G	A	1.041e^-4	0.817	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	8524455	2L_8524455_SNP [dm3] 2L_8524455_SNP [dm6]	T	C	1.042e^-4	0.817	SYNONYMOUS_CODING Acer DOWNSTREAM lmgA & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	17269417	X_17269417_INS [dm3] X_17375384_INS [dm6]	A	AGACAAA	1.045e^-4	0.817	INTERGENIC
3L	7997858	3L_7997858_SNP [dm3] 3L_8004758_SNP [dm6]	C	T	1.050e^-4	0.817	INTRON nmo
3R	19659500	3R_19659500_SNP [dm3] 3R_23833778_SNP [dm6]	T	A	1.066e^-4	0.82	INTRON CG34355
2L	8529738	2L_8529738_SNP [dm3] 2L_8529738_SNP [dm6]	A	C	1.070e^-4	0.82	INTRON CG17834	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	8792730	3L_8792730_SNP [dm3] 3L_8799630_SNP [dm6]	T	C	1.073e^-4	0.82	DOWNSTREAM Fhos INTRON CG13310
2R	13407535	2R_13407535_SNP [dm3] 2R_17520030_SNP [dm6]	C	T	1.077e^-4	0.82	UTR_3_PRIME Patronin DOWNSTREAM Patronin
2L	8509953	2L_8509953_SNP [dm3] 2L_8509953_SNP [dm6]	G	A	1.078e^-4	0.82	SYNONYMOUS_CODING CG13096	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	12678571	X_12678571_SNP [dm3] X_12784538_SNP [dm6]	T	G	1.079e^-4	0.82	INTRON CG32647
2L	8507783	2L_8507783_SNP [dm3] 2L_8507783_SNP [dm6]	G	T	1.086e^-4	0.821	UPSTREAM Dh31 INTERGENIC
3L	10768190	3L_10768190_SNP [dm3] 3L_10775090_SNP [dm6]	G	A	1.093e^-4	0.821	INTERGENIC
3L	14330963	3L_14330963_SNP [dm3] 3L_14337863_SNP [dm6]	C	A	1.095e^-4	0.821	INTRON fz
2L	8515035	2L_8515035_SNP [dm3] 2L_8515035_SNP [dm6]	G	T	1.104e^-4	0.823	UPSTREAM PIG-U & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2L	6908819	2L_6908819_SNP [dm3] 2L_6908819_SNP [dm6]	T	C	1.108e^-4	0.823	SYNONYMOUS_CODING Rat1 UPSTREAM CG13773	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	25887383	3R_25887383_DEL [dm3] 3R_30061661_DEL [dm6]	TT	A	1.110e^-4	0.823	INTRON sima	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	23247012	3R_23247012_SNP [dm3] 3R_27421290_SNP [dm6]	G	T	1.123e^-4	0.826	INTRON side
2L	8511667	2L_8511667_SNP [dm3] 2L_8511667_SNP [dm6]	C	G	1.125e^-4	0.826	SYNONYMOUS_CODING CG13096 DOWNSTREAM CG13097	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8522729	3L_8522729_SNP [dm3] 3L_8529629_SNP [dm6]	T	C	1.130e^-4	0.826	INTRON foi
3R	21183928	3R_21183928_SNP [dm3] 3R_25358206_SNP [dm6]	C	T	1.131e^-4	0.826	UPSTREAM CG11913 INTRON Fur1
3L	14330979	3L_14330979_SNP [dm3] 3L_14337879_SNP [dm6]	C	T	1.142e^-4	0.827	INTRON fz
3R	25787774	3R_25787774_SNP [dm3] 3R_29962052_SNP [dm6]	G	T	1.142e^-4	0.827	INTRON TkR99D
3R	13144931	3R_13144931_SNP [dm3] 3R_17319209_SNP [dm6]	A	C	1.146e^-4	0.827	DOWNSTREAM beat-IIa INTERGENIC
X	6323115	X_6323115_SNP [dm3] X_6429082_SNP [dm6]	T	G	1.156e^-4	0.831	INTRON CG42340
X	15421596	X_15421596_SNP [dm3] X_15527563_SNP [dm6]	C	T	1.175e^-4	0.841	INTRON Ac13E
2R	9203429	2R_9203429_SNP [dm3] 2R_13315924_SNP [dm6]	T	A	1.180e^-4	0.842	INTERGENIC
3R	20105688	3R_20105688_SNP [dm3] 3R_24279966_SNP [dm6]	T	G	1.193e^-4	0.843	NON_SYNONYMOUS_CODING CG13611	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	17610733	3R_17610733_SNP [dm3] 3R_21785011_SNP [dm6]	T	C	1.196e^-4	0.843	UTR_3_PRIME CASK DOWNSTREAM CASK EXON CRG	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3R	19398121	3R_19398121_SNP [dm3] 3R_23572399_SNP [dm6]	C	A	1.202e^-4	0.843	INTRON beat-IV
3R	25786496	3R_25786496_SNP [dm3] 3R_29960774_SNP [dm6]	C	G	1.208e^-4	0.843	INTRON TkR99D
X	9918763	X_9918763_INS [dm3] X_10024730_INS [dm6]	A	AA	1.209e^-4	0.843	INTRON Cht6
3R	25754573	3R_25754573_SNP [dm3] 3R_29928851_SNP [dm6]	G	A	1.212e^-4	0.843	SYNONYMOUS_CODING CG31202 DOWNSTREAM CG15522
3R	19770207	3R_19770207_SNP [dm3] 3R_23944485_SNP [dm6]	C	T	1.214e^-4	0.843	SYNONYMOUS_CODING CG12268	TF binding site mE1_TFBS_cad
3R	25789094	3R_25789094_SNP [dm3] 3R_29963372_SNP [dm6]	T	G	1.231e^-4	0.848	INTRON TkR99D
3L	19522433	3L_19522433_SNP [dm3] 3L_19529333_SNP [dm6]	G	A	1.246e^-4	0.848	INTERGENIC
3L	12289983	3L_12289983_SNP [dm3] 3L_12296883_SNP [dm6]	T	C	1.254e^-4	0.848	UPSTREAM CG4328 INTERGENIC
3L	18254876	3L_18254876_SNP [dm3] 3L_18261776_SNP [dm6]	G	A	1.257e^-4	0.848	INTERGENIC
2L	7440894	2L_7440894_SNP [dm3] 2L_7440894_SNP [dm6]	A	G	1.261e^-4	0.848	UTR_5_PRIME CG5973 INTRON CG5973
X	4768483	X_4768483_SNP [dm3] X_4874450_SNP [dm6]	T	A	1.268e^-4	0.848	UPSTREAM CR43495 INTRON CG42594
2L	19248258	2L_19248258_SNP [dm3] 2L_19248258_SNP [dm6]	A	C	1.268e^-4	0.848	INTERGENIC
2L	313440	2L_313440_SNP [dm3] 2L_313440_SNP [dm6]	A	G	1.275e^-4	0.848	INTRON Plc21C
3L	2854296	3L_2854296_SNP [dm3] 3L_2854296_SNP [dm6]	A	C	1.282e^-4	0.848	INTRON CG43444
3L	18254736	3L_18254736_SNP [dm3] 3L_18261636_SNP [dm6]	A	T	1.286e^-4	0.848	INTERGENIC
2R	18753835	2R_18753835_SNP [dm3] 2R_22866312_SNP [dm6]	G	A	1.287e^-4	0.848	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	8507797	2L_8507797_MNP [dm3] 2L_8507797_MNP [dm6]	AAT	TCC	1.288e^-4	0.848	UPSTREAM Dh31 INTERGENIC
3R	3202451	3R_3202451_SNP [dm3] 3R_7376729_SNP [dm6]	G	A	1.289e^-4	0.848	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	25784965	3R_25784965_SNP [dm3] 3R_29959243_SNP [dm6]	A	T	1.291e^-4	0.848	NON_SYNONYMOUS_CODING TkR99D
2L	10515816	2L_10515816_SNP [dm3] 2L_10515816_SNP [dm6]	A	T	1.292e^-4	0.848	INTRON Fatp & 1 other
3L	5799191	3L_5799191_SNP [dm3] 3L_5806091_SNP [dm6]	A	C	1.293e^-4	0.848	SYNONYMOUS_CODING S6k DOWNSTREAM CG42272	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2L	1229613	2L_1229613_SNP [dm3] 2L_1229613_SNP [dm6]	C	T	1.299e^-4	0.848	UTR_3_PRIME CG42329
3R	18252458	3R_18252458_SNP [dm3] 3R_22426736_SNP [dm6]	A	G	1.303e^-4	0.848	SPLICE_SITE_REGION CG13847 INTRON CG13847	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	6357995	3L_6357995_SNP [dm3] 3L_6364895_SNP [dm6]	G	T	1.311e^-4	0.848	INTERGENIC
3L	2076086	3L_2076086_SNP [dm3] 3L_2076086_SNP [dm6]	T	C	1.315e^-4	0.848	INTRON sls
2L	17418927	2L_17418927_SNP [dm3] 2L_17418927_SNP [dm6]	C	T	1.319e^-4	0.848	SYNONYMOUS_CODING Dif	TF binding site mE1_TFBS_cad
2L	6908807	2L_6908807_SNP [dm3] 2L_6908807_SNP [dm6]	T	C	1.323e^-4	0.848	SYNONYMOUS_CODING Rat1 UPSTREAM CG13773	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	24352502	3R_24352502_SNP [dm3] 3R_28526780_SNP [dm6]	C	T	1.325e^-4	0.848	SYNONYMOUS_CODING Ppn	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15262935	2R_15262935_SNP [dm3] 2R_19375430_SNP [dm6]	C	A	1.329e^-4	0.848	UTR_5_PRIME CG10062	TF binding site mE1_TFBS_inv
3L	8684146	3L_8684146_SNP [dm3] 3L_8691046_SNP [dm6]	T	C	1.345e^-4	0.851	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	1242884	3L_1242884_SNP [dm3] 3L_1242884_SNP [dm6]	A	T	1.347e^-4	0.851	SYNONYMOUS_CODING Klp61F DOWNSTREAM CG9194	TF binding site mE1_TFBS_sens
3R	746651	3R_746651_SNP [dm3] 3R_4920929_SNP [dm6]	C	A	1.354e^-4	0.851	INTRON Cdep
3R	5123656	3R_5123656_SNP [dm3] 3R_9297934_SNP [dm6]	A	G	1.356e^-4	0.851	INTRON CG8861
X	17236479	X_17236479_SNP [dm3] X_17342446_SNP [dm6]	G	C	1.364e^-4	0.851	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	3930289	2L_3930289_SNP [dm3] 2L_3930289_SNP [dm6]	A	G	1.365e^-4	0.851	INTRON fred
3L	6577970	3L_6577970_SNP [dm3] 3L_6584870_SNP [dm6]	A	T	1.369e^-4	0.851	INTRON CG18769 & 1 other
3R	25785282	3R_25785282_SNP [dm3] 3R_29959560_SNP [dm6]	C	G	1.371e^-4	0.851	INTRON TkR99D
3L	12374596	3L_12374596_SNP [dm3] 3L_12381496_SNP [dm6]	C	A	1.383e^-4	0.855	INTRON Ncc69	TF binding site mE1_TFBS_inv
3R	18534717	3R_18534717_SNP [dm3] 3R_22708995_SNP [dm6]	A	G	1.385e^-4	0.855	SYNONYMOUS_CODING CG4907	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	14981433	2L_14981433_SNP [dm3] 2L_14981433_SNP [dm6]	G	C	1.404e^-4	0.864	INTRON mol
3L	19105816	3L_19105816_SNP [dm3] 3L_19112716_SNP [dm6]	G	A	1.418e^-4	0.869	INTRON CG14082
3L	8648609	3L_8648609_SNP [dm3] 3L_8655509_SNP [dm6]	A	G	1.424e^-4	0.87	INTERGENIC
3L	14330690	3L_14330690_INS [dm3] 3L_14337590_INS [dm6]	T	ATCCAA	1.431e^-4	0.871	INTRON fz
3R	25769051	3R_25769051_SNP [dm3] 3R_29943329_SNP [dm6]	G	C	1.439e^-4	0.873	NON_SYNONYMOUS_CODING CG15523
3L	8648526	3L_8648526_SNP [dm3] 3L_8655426_SNP [dm6]	G	T	1.455e^-4	0.875	INTERGENIC	TF binding site mE1_TFBS_cad
2R	3428044	2R_3428044_SNP [dm3] 2R_7540539_SNP [dm6]	A	T	1.461e^-4	0.875	UPSTREAM CG1598 INTRON Corin
3R	26060102	3R_26060102_SNP [dm3] 3R_30234380_SNP [dm6]	G	T	1.461e^-4	0.875	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	8648542	3L_8648542_SNP [dm3] 3L_8655442_SNP [dm6]	T	C	1.468e^-4	0.875	INTERGENIC	TF binding site mE1_TFBS_cad
3R	19769136	3R_19769136_SNP [dm3] 3R_23943414_SNP [dm6]	A	G	1.469e^-4	0.875	UPSTREAM Gdh DOWNSTREAM CG12268 INTERGENIC
2L	313403	2L_313403_SNP [dm3] 2L_313403_SNP [dm6]	A	T	1.470e^-4	0.875	INTRON Plc21C
3L	8684285	3L_8684285_SNP [dm3] 3L_8691185_SNP [dm6]	A	T	1.481e^-4	0.877	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	15731730	X_15731730_SNP [dm3] X_15837697_SNP [dm6]	T	C	1.482e^-4	0.877	UPSTREAM CG8565 DOWNSTREAM CG32582 INTERGENIC
3R	25204180	3R_25204180_SNP [dm3] 3R_29378458_SNP [dm6]	T	G	1.497e^-4	0.883	INTRON Ptp99A
2L	3930288	2L_3930288_SNP [dm3] 2L_3930288_SNP [dm6]	C	A	1.516e^-4	0.886	INTRON fred
3R	9681057	3R_9681057_SNP [dm3] 3R_13855335_SNP [dm6]	C	T	1.521e^-4	0.886	INTRON CG14362
X	9111590	X_9111590_SNP [dm3] X_9217557_SNP [dm6]	G	T	1.535e^-4	0.886	DOWNSTREAM t & 1 other INTERGENIC
X	5578921	X_5578921_INS [dm3] X_5684888_INS [dm6]	A	ACCATAAGCGATACGTTA...	1.536e^-4	0.886	DOWNSTREAM CG3160 & 1 other INTERGENIC
2L	10515691	2L_10515691_SNP [dm3] 2L_10515691_SNP [dm6]	T	A	1.567e^-4	0.886	INTRON Fatp & 1 other
3L	19512034	3L_19512034_SNP [dm3] 3L_19518934_SNP [dm6]	G	T	1.574e^-4	0.886	UPSTREAM Cpr76Ba & 1 other INTERGENIC
X	5509440	X_5509440_MNP [dm3] X_5615407_MNP [dm6]	TTCC	CAGT	1.590e^-4	0.886	NON_SYNONYMOUS_CODING CG34434 UPSTREAM CG34435
2L	6898946	2L_6898946_SNP [dm3] 2L_6898946_SNP [dm6]	T	A	1.590e^-4	0.886	INTRON Nlg2
3L	7593180	3L_7593180_SNP [dm3] 3L_7600080_SNP [dm6]	T	G	1.590e^-4	0.886	INTRON CG33275
2R	14416127	2R_14416127_SNP [dm3] 2R_18528622_SNP [dm6]	T	A	1.590e^-4	0.886	INTRON CG10924	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	10362779	3L_10362779_SNP [dm3] 3L_10369679_SNP [dm6]	G	T	1.592e^-4	0.886	INTERGENIC
2L	10498542	2L_10498542_INS [dm3] 2L_10498542_INS [dm6]	T	TTTTGGTT	1.615e^-4	0.886	INTRON Myo31DF
3R	25777364	3R_25777364_SNP [dm3] 3R_29951642_SNP [dm6]	G	C	1.628e^-4	0.886	NON_SYNONYMOUS_CODING TkR99D	TF binding site mE1_TFBS_chinmo
3R	25998155	3R_25998155_SNP [dm3] 3R_30172433_SNP [dm6]	C	T	1.628e^-4	0.886	UTR_3_PRIME Mlc2
3R	10535264	3R_10535264_SNP [dm3] 3R_14709542_SNP [dm6]	A	C	1.631e^-4	0.886	INTRON kibra
3R	15901587	3R_15901587_SNP [dm3] 3R_20075865_SNP [dm6]	G	C	1.637e^-4	0.886	INTERGENIC
3L	2181723	3L_2181723_SNP [dm3] 3L_2181723_SNP [dm6]	C	T	1.641e^-4	0.886	INTERGENIC
2L	16107437	2L_16107437_SNP [dm3] 2L_16107437_SNP [dm6]	C	G	1.642e^-4	0.886	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	2457466	3R_2457466_SNP [dm3] 3R_6631744_SNP [dm6]	C	T	1.642e^-4	0.886	DOWNSTREAM sunz INTERGENIC
2L	10515411	2L_10515411_DEL [dm3] 2L_10515411_DEL [dm6]	AGCCGTCTTCAAAATACATA...	A	1.642e^-4	0.886	INTRON Fatp & 1 other
3R	22538319	3R_22538319_SNP [dm3] 3R_26712597_SNP [dm6]	C	T	1.642e^-4	0.886	INTRON amon	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	14160357	3L_14160357_SNP [dm3] 3L_14167257_SNP [dm6]	T	C	1.644e^-4	0.886	INTERGENIC	regulatory region REDfly_CRMs
2L	8510361	2L_8510361_SNP [dm3] 2L_8510361_SNP [dm6]	C	A	1.649e^-4	0.886	INTRON CG13096	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	15083745	3L_15083745_SNP [dm3] 3L_15090645_SNP [dm6]	A	T	1.652e^-4	0.886	UPSTREAM cp309 DOWNSTREAM CG6945 INTRON cp309	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_Trl
2R	14873647	2R_14873647_SNP [dm3] 2R_18986142_SNP [dm6]	G	A	1.656e^-4	0.886	INTERGENIC
3R	3147415	3R_3147415_INS [dm3] 3R_7321693_INS [dm6]	T	TGTTCAT	1.658e^-4	0.886	INTERGENIC
3R	25790694	3R_25790694_SNP [dm3] 3R_29964972_SNP [dm6]	A	T	1.660e^-4	0.886	INTRON TkR99D
2R	11847373	2R_11847373_SNP [dm3] 2R_15959868_SNP [dm6]	C	A	1.660e^-4	0.886	SYNONYMOUS_CODING Strn-Mlck UTR_3_PRIME Strn-Mlck
2L	6136349	2L_6136349_INS [dm3] 2L_6136349_INS [dm6]	G	GGG	1.661e^-4	0.886	INTERGENIC
2L	488487	2L_488487_SNP [dm3] 2L_488487_SNP [dm6]	C	T	1.667e^-4	0.886	INTRON ush	TF binding site mE1_TFBS_Trl
3L	4320228	3L_4320228_SNP [dm3] 3L_4320228_SNP [dm6]	G	C	1.674e^-4	0.886	NON_SYNONYMOUS_CODING CG32250 DOWNSTREAM CG15014	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
X	8837173	X_8837173_SNP [dm3] X_8943140_SNP [dm6]	A	T	1.676e^-4	0.886	INTRON rdgA
3R	25775887	3R_25775887_SNP [dm3] 3R_29950165_SNP [dm6]	C	A	1.678e^-4	0.886	DOWNSTREAM TkR99D INTERGENIC
2L	9077000	2L_9077000_SNP [dm3] 2L_9077000_SNP [dm6]	G	A	1.681e^-4	0.886	UPSTREAM CG12439 INTERGENIC
2L	1252198	2L_1252198_SNP [dm3] 2L_1252198_SNP [dm6]	G	C	1.683e^-4	0.886	INTERGENIC
3R	22954563	3R_22954563_DEL [dm3] 3R_27128841_DEL [dm6]	CGCTTTCCCGCTTTTTGCCC...	C	1.688e^-4	0.886	INTRON CG6051	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	12712581	3R_12712581_SNP [dm3] 3R_16886859_SNP [dm6]	C	A	1.695e^-4	0.886	INTRON iab-8	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
3R	25786343	3R_25786343_SNP [dm3] 3R_29960621_SNP [dm6]	A	C	1.702e^-4	0.886	INTRON TkR99D
3L	8197807	3L_8197807_DEL [dm3] 3L_8204707_DEL [dm6]	CGCATTCCAATCCGAACCGC...	G	1.705e^-4	0.886	INTERGENIC
3R	17610728	3R_17610728_SNP [dm3] 3R_21785006_SNP [dm6]	C	A	1.706e^-4	0.886	UTR_3_PRIME CASK DOWNSTREAM CASK EXON CRG	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	3930283	2L_3930283_SNP [dm3] 2L_3930283_SNP [dm6]	T	C	1.708e^-4	0.886	INTRON fred
2L	4166188	2L_4166188_SNP [dm3] 2L_4166188_SNP [dm6]	T	G	1.708e^-4	0.886	UPSTREAM Or24a INTERGENIC
2L	16183848	2L_16183848_SNP [dm3] 2L_16183848_SNP [dm6]	A	T	1.710e^-4	0.886	INTRON Ca-alpha1D
3R	25204178	3R_25204178_SNP [dm3] 3R_29378456_SNP [dm6]	G	C	1.717e^-4	0.886	INTRON Ptp99A
2R	19940886	2R_19940886_SNP [dm3] 2R_24053363_SNP [dm6]	G	A	1.720e^-4	0.886	DOWNSTREAM sei INTRON ppk29
2R	18751132	2R_18751132_SNP [dm3] 2R_22863609_SNP [dm6]	C	A	1.723e^-4	0.886	INTERGENIC
3L	18264172	3L_18264172_SNP [dm3] 3L_18271072_SNP [dm6]	A	G	1.724e^-4	0.886	INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_sens
2L	15779227	2L_15779227_SNP [dm3] 2L_15779227_SNP [dm6]	C	T	1.734e^-4	0.886	INTERGENIC
2L	9078594	2L_9078594_SNP [dm3] 2L_9078594_SNP [dm6]	A	C	1.734e^-4	0.886	DOWNSTREAM CG12439 INTERGENIC
3L	12660609	3L_12660609_SNP [dm3] 3L_12667509_SNP [dm6]	C	T	1.743e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	13594255	2R_13594255_SNP [dm3] 2R_17706750_SNP [dm6]	G	T	1.746e^-4	0.887	SYNONYMOUS_CODING CG6424	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	26388204	3R_26388204_SNP [dm3] 3R_30562482_SNP [dm6]	A	T	1.755e^-4	0.888	UPSTREAM tmod INTRON tmod	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
X	14138420	X_14138420_SNP [dm3] X_14244387_SNP [dm6]	G	A	1.756e^-4	0.888	INTRON CG32599
2L	262065	2L_262065_SNP [dm3] 2L_262065_SNP [dm6]	A	C	1.762e^-4	0.888	UTR_3_PRIME CG17075 UPSTREAM CR44219 INTRON CG3645
3R	25776747	3R_25776747_SNP [dm3] 3R_29951025_SNP [dm6]	A	C	1.767e^-4	0.888	UTR_3_PRIME TkR99D
3L	19512027	3L_19512027_SNP [dm3] 3L_19518927_SNP [dm6]	G	A	1.773e^-4	0.888	UPSTREAM Cpr76Ba & 1 other INTERGENIC
3L	19520275	3L_19520275_SNP [dm3] 3L_19527175_SNP [dm6]	C	A	1.776e^-4	0.888	UTR_3_PRIME Cpr76Bc
2R	14117810	2R_14117810_SNP [dm3] 2R_18230305_SNP [dm6]	G	C	1.791e^-4	0.891	EXON CR45311	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_Trl
3L	2180552	3L_2180552_SNP [dm3] 3L_2180552_SNP [dm6]	A	G	1.792e^-4	0.891	INTERGENIC
2R	2688115	2R_2688115_SNP [dm3] 2R_6800610_SNP [dm6]	A	G	1.795e^-4	0.891	INTERGENIC
2L	2617256	2L_2617256_SNP [dm3] 2L_2617256_SNP [dm6]	T	C	1.806e^-4	0.894	INTERGENIC
3L	7997836	3L_7997836_SNP [dm3] 3L_8004736_SNP [dm6]	A	T	1.814e^-4	0.896	INTRON nmo
2L	4629873	2L_4629873_INS [dm3] 2L_4629873_INS [dm6]	A	TGC	1.845e^-4	0.903	INTERGENIC
X	8590249	X_8590249_SNP [dm3] X_8696216_SNP [dm6]	C	T	1.847e^-4	0.903	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	4806341	2L_4806341_SNP [dm3] 2L_4806341_SNP [dm6]	C	A	1.851e^-4	0.903	INTERGENIC
X	13272841	X_13272841_SNP [dm3] X_13378808_SNP [dm6]	T	C	1.860e^-4	0.903	SYNONYMOUS_CODING CG1640
2R	17048654	2R_17048654_SNP [dm3] 2R_21161149_SNP [dm6]	A	T	1.865e^-4	0.903	UPSTREAM CG30389 & 2 others DOWNSTREAM tRNA:G3:57BCa & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3L	3330394	3L_3330394_SNP [dm3] 3L_3330394_SNP [dm6]	A	G	1.873e^-4	0.903	NON_SYNONYMOUS_CODING CG14961 DOWNSTREAM CR45380	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	7898598	2L_7898598_SNP [dm3] 2L_7898598_SNP [dm6]	A	C	1.874e^-4	0.903	INTRON Snoo
2L	11943305	2L_11943305_SNP [dm3] 2L_11943305_SNP [dm6]	C	A	1.879e^-4	0.903	UPSTREAM Cry INTERGENIC	regulatory region REDfly_CRMs
3R	19935642	3R_19935642_SNP [dm3] 3R_24109920_SNP [dm6]	A	T	1.881e^-4	0.903	UTR_3_PRIME CG18428 UPSTREAM 4EHP DOWNSTREAM CG13605	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	25789336	3R_25789336_SNP [dm3] 3R_29963614_SNP [dm6]	T	C	1.881e^-4	0.903	INTRON TkR99D
3L	2179324	3L_2179324_SNP [dm3] 3L_2179324_SNP [dm6]	G	A	1.883e^-4	0.903	INTERGENIC
3R	23165564	3R_23165564_SNP [dm3] 3R_27339842_SNP [dm6]	G	A	1.890e^-4	0.905	UPSTREAM CG42534 INTERGENIC
2L	9345433	2L_9345433_SNP [dm3] 2L_9345433_SNP [dm6]	C	T	1.904e^-4	0.909	DOWNSTREAM CG3748 INTERGENIC
2L	7247510	2L_7247510_SNP [dm3] 2L_7247510_SNP [dm6]	C	A	1.911e^-4	0.91	INTRON Ndae1	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4806347	2L_4806347_SNP [dm3] 2L_4806347_SNP [dm6]	A	G	1.926e^-4	0.915	INTERGENIC
2L	260081	2L_260081_SNP [dm3] 2L_260081_SNP [dm6]	G	T	1.939e^-4	0.916	UTR_3_PRIME CG17075 INTRON CG3645
3L	14232058	3L_14232058_SNP [dm3] 3L_14238958_SNP [dm6]	A	G	1.942e^-4	0.916	DOWNSTREAM CG7906 EXON CR45399
X	4768484	X_4768484_INS [dm3] X_4874451_INS [dm6]	A	AC	1.943e^-4	0.916	UPSTREAM CR43495 INTRON CG42594
3R	16838169	3R_16838169_SNP [dm3] 3R_21012447_SNP [dm6]	G	C	1.977e^-4	0.927	INTRON Calx
3R	2453845	3R_2453845_SNP [dm3] 3R_6628123_SNP [dm6]	C	A	1.980e^-4	0.927	UPSTREAM sowi DOWNSTREAM CG15177 INTERGENIC
3R	26176820	3R_26176820_SNP [dm3] 3R_30351098_SNP [dm6]	T	C	1.983e^-4	0.927	INTRON hdc	TF binding site mE1_TFBS_chinmo
2R	12266465	2R_12266465_SNP [dm3] 2R_16378960_SNP [dm6]	C	G	2.020e^-4	0.934	DOWNSTREAM CR45317 EXON CR45316
3L	14391889	3L_14391889_SNP [dm3] 3L_14398789_SNP [dm6]	T	G	2.021e^-4	0.934	INTERGENIC
X	12433308	X_12433308_INS [dm3] X_12539275_INS [dm6]	C	CTAC	2.022e^-4	0.934	INTRON CG43921
2R	17047767	2R_17047767_SNP [dm3] 2R_21160262_SNP [dm6]	A	G	2.023e^-4	0.934	UTR_5_PRIME CG30389 DOWNSTREAM tRNA:CR30206 INTRON CG30389	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
2R	17047921	2R_17047921_SNP [dm3] 2R_21160416_SNP [dm6]	A	C	2.023e^-4	0.934	UPSTREAM CG30389 DOWNSTREAM tRNA:CR30206 & 1 other INTRON CG30389	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
2R	14415599	2R_14415599_SNP [dm3] 2R_18528094_SNP [dm6]	A	T	2.027e^-4	0.934	INTRON CG10924	TF binding site mE1_TFBS_Trl
3L	5779541	3L_5779541_DEL [dm3] 3L_5786441_DEL [dm6]	CC	C	2.046e^-4	0.938	UTR_5_PRIME Cralbp
3R	25762651	3R_25762651_SNP [dm3] 3R_29936929_SNP [dm6]	G	C	2.052e^-4	0.938	SYNONYMOUS_CODING CG15523	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3L	9006388	3L_9006388_SNP [dm3] 3L_9013288_SNP [dm6]	G	C	2.059e^-4	0.938	NON_SYNONYMOUS_CODING Doc2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo
X	20397986	X_20397986_SNP [dm3] X_20526959_SNP [dm6]	A	T	2.074e^-4	0.938	UPSTREAM CG42579 INTERGENIC
2L	2879909	2L_2879909_SNP [dm3] 2L_2879909_SNP [dm6]	C	T	2.081e^-4	0.938	DOWNSTREAM CG31950 & 1 other INTRON betaggt-II	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo
3R	26053698	3R_26053698_SNP [dm3] 3R_30227976_SNP [dm6]	G	A	2.083e^-4	0.938	INTERGENIC
X	5610659	X_5610659_SNP [dm3] X_5716626_SNP [dm6]	G	A	2.083e^-4	0.938	INTRON CG33080
2R	18702933	2R_18702933_SNP [dm3] 2R_22815428_SNP [dm6]	C	T	2.084e^-4	0.938	SYNONYMOUS_CODING stl	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
2L	4049110	2L_4049110_SNP [dm3] 2L_4049110_SNP [dm6]	G	T	2.084e^-4	0.938	INTRON ed
3R	25630383	3R_25630383_SNP [dm3] 3R_29804661_SNP [dm6]	C	T	2.089e^-4	0.938	SYNONYMOUS_CODING ncd DOWNSTREAM CG7789	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	14873651	2R_14873651_SNP [dm3] 2R_18986146_SNP [dm6]	G	A	2.097e^-4	0.938	INTERGENIC
2L	4764001	2L_4764001_SNP [dm3] 2L_4764001_SNP [dm6]	T	G	2.100e^-4	0.938	DOWNSTREAM CG42523 INTRON CG15630
2L	8528806	2L_8528806_SNP [dm3] 2L_8528806_SNP [dm6]	A	C	2.111e^-4	0.938	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	5562704	3L_5562704_SNP [dm3] 3L_5569604_SNP [dm6]	G	A	2.118e^-4	0.938	INTRON Msr-110
3L	8699166	3L_8699166_SNP [dm3] 3L_8706066_SNP [dm6]	C	A	2.119e^-4	0.938	INTERGENIC	TF binding site mE1_TFBS_cad
3L	13669407	3L_13669407_SNP [dm3] 3L_13676307_SNP [dm6]	T	A	2.122e^-4	0.938	INTRON bru-3	TF binding site mE1_TFBS_chinmo
3L	18603096	3L_18603096_SNP [dm3] 3L_18609996_SNP [dm6]	T	C	2.129e^-4	0.938	SYNONYMOUS_CODING CG32201 DOWNSTREAM CG18231 INTRON CG4174 & 1 other
2R	3525765	2R_3525765_SNP [dm3] 2R_7638260_SNP [dm6]	C	A	2.131e^-4	0.938	UTR_5_PRIME CG43340 UPSTREAM CG43340 INTRON CG43340
2L	6901520	2L_6901520_INS [dm3] 2L_6901520_INS [dm6]	A	AATC	2.133e^-4	0.938	UPSTREAM mir-932 INTRON Nlg2
3R	11869884	3R_11869884_SNP [dm3] 3R_16044162_SNP [dm6]	G	A	2.136e^-4	0.938	SYNONYMOUS_CODING CG10264 DOWNSTREAM CG10407
3R	27404969	3R_27404969_SNP [dm3] 3R_31579247_SNP [dm6]	A	G	2.164e^-4	0.941	SYNONYMOUS_CODING pygo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
X	569338	X_569338_SNP [dm3] X_675305_SNP [dm6]	G	A	2.169e^-4	0.941	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	19577575	3L_19577575_DEL [dm3] 3L_19584475_DEL [dm6]	GGG	G	2.175e^-4	0.941	UTR_5_PRIME Shal DOWNSTREAM CG9231	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	914195	2R_914195_SNP [dm3] 2R_5026690_SNP [dm6]	A	C	2.181e^-4	0.941	INTERGENIC	transposable element FlyBase
2R	14570464	2R_14570464_SNP [dm3] 2R_18682959_SNP [dm6]	T	A	2.186e^-4	0.941	SYNONYMOUS_CODING CG44434 UTR_5_PRIME CG44435
2R	18284225	2R_18284225_SNP [dm3] 2R_22396720_SNP [dm6]	A	G	2.211e^-4	0.941	INTRON babos	TF binding site BDTNP1_TFBS_dl
2L	4148045	2L_4148045_SNP [dm3] 2L_4148045_SNP [dm6]	A	T	2.211e^-4	0.941	INTERGENIC
3L	8684042	3L_8684042_SNP [dm3] 3L_8690942_SNP [dm6]	T	C	2.213e^-4	0.941	INTERGENIC
2L	465672	2L_465672_SNP [dm3] 2L_465672_SNP [dm6]	T	C	2.221e^-4	0.941	INTRON CG4297
2R	11933732	2R_11933732_SNP [dm3] 2R_16046227_SNP [dm6]	C	G	2.229e^-4	0.941	UTR_3_PRIME SP2353
2L	10528086	2L_10528086_SNP [dm3] 2L_10528086_SNP [dm6]	A	G	2.231e^-4	0.941	INTRON Lip4	TF binding site BDTNP1_TFBS_dl
2L	11943323	2L_11943323_INS [dm3] 2L_11943323_INS [dm6]	A	GTTTTGGTCGGTTGTAG...	2.239e^-4	0.941	UPSTREAM Cry INTERGENIC	regulatory region REDfly_CRMs
3L	17219665	3L_17219665_SNP [dm3] 3L_17226565_SNP [dm6]	C	T	2.246e^-4	0.941	INTRON Rbp6
3L	17219667	3L_17219667_SNP [dm3] 3L_17226567_SNP [dm6]	A	C	2.246e^-4	0.941	INTRON Rbp6
3R	25776480	3R_25776480_SNP [dm3] 3R_29950758_SNP [dm6]	G	A	2.247e^-4	0.941	DOWNSTREAM TkR99D INTERGENIC
2L	11867037	2L_11867037_SNP [dm3] 2L_11867037_SNP [dm6]	T	A	2.247e^-4	0.941	INTRON Pde1c
3R	20631455	3R_20631455_SNP [dm3] 3R_24805733_SNP [dm6]	G	T	2.251e^-4	0.941	UTR_3_PRIME CG5807 UPSTREAM polybromo INTRON CG5807	TF binding site BDTNP1_TFBS_dl
2L	1578690	2L_1578690_SNP [dm3] 2L_1578690_SNP [dm6]	T	C	2.252e^-4	0.941	INTRON haf	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	12295102	3L_12295102_SNP [dm3] 3L_12302002_SNP [dm6]	G	T	2.254e^-4	0.941	DOWNSTREAM CR44551 & 1 other INTERGENIC
3L	521494	3L_521494_SNP [dm3] 3L_521494_SNP [dm6]	C	G	2.254e^-4	0.941	INTRON klar
3L	12294811	3L_12294811_SNP [dm3] 3L_12301711_SNP [dm6]	C	G	2.263e^-4	0.941	DOWNSTREAM CR44551 EXON CR44550
3L	12294816	3L_12294816_SNP [dm3] 3L_12301716_SNP [dm6]	A	T	2.263e^-4	0.941	DOWNSTREAM CR44551 EXON CR44550
2L	19228552	2L_19228552_SNP [dm3] 2L_19228552_SNP [dm6]	T	C	2.272e^-4	0.941	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sbb
2R	11475078	2R_11475078_SNP [dm3] 2R_15587573_SNP [dm6]	C	G	2.279e^-4	0.941	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	18284283	2R_18284283_SNP [dm3] 2R_22396778_SNP [dm6]	G	A	2.289e^-4	0.941	INTRON babos	TF binding site BDTNP1_TFBS_dl
2R	14426681	2R_14426681_SNP [dm3] 2R_18539176_SNP [dm6]	G	C	2.294e^-4	0.941	UTR_3_PRIME CG45087 & 1 other UPSTREAM Rgk2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	23022125	3R_23022125_SNP [dm3] 3R_27196403_SNP [dm6]	C	A	2.298e^-4	0.941	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_twi
3R	25770440	3R_25770440_SNP [dm3] 3R_29944718_SNP [dm6]	A	G	2.302e^-4	0.941	SYNONYMOUS_CODING CG15523
3R	13733941	3R_13733941_SNP [dm3] 3R_17908219_SNP [dm6]	C	A	2.307e^-4	0.941	DOWNSTREAM CG12347 INTRON Rim
2R	17710971	2R_17710971_SNP [dm3] 2R_21823466_SNP [dm6]	G	A	2.308e^-4	0.941	SYNONYMOUS_CODING CG13492	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	1705851	3R_1705851_SNP [dm3] 3R_5880129_SNP [dm6]	G	A	2.318e^-4	0.941	INTRON CG34113
3R	13648604	3R_13648604_SNP [dm3] 3R_17822882_SNP [dm6]	A	G	2.321e^-4	0.941	INTRON tinc	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5328244	2L_5328244_SNP [dm3] 2L_5328244_SNP [dm6]	T	A	2.321e^-4	0.941	DOWNSTREAM cype INTRON CG14022
3L	8424109	3L_8424109_SNP [dm3] 3L_8431009_SNP [dm6]	A	G	2.328e^-4	0.941	UTR_3_PRIME Cbl
X	20396684	X_20396684_SNP [dm3] X_20525657_SNP [dm6]	C	G	2.332e^-4	0.941	UPSTREAM Tak1 INTERGENIC	TF binding site mE1_TFBS_zfh1
3L	2184229	3L_2184229_SNP [dm3] 3L_2184229_SNP [dm6]	G	A	2.334e^-4	0.941	INTERGENIC
2L	1229615	2L_1229615_SNP [dm3] 2L_1229615_SNP [dm6]	T	A	2.334e^-4	0.941	UTR_3_PRIME CG42329
3R	2301528	3R_2301528_SNP [dm3] 3R_6475806_SNP [dm6]	A	G	2.335e^-4	0.941	INTERGENIC
3L	12067170	3L_12067170_SNP [dm3] 3L_12074070_SNP [dm6]	T	C	2.347e^-4	0.941	INTRON Sema-5c
2L	1231116	2L_1231116_SNP [dm3] 2L_1231116_SNP [dm6]	A	G	2.358e^-4	0.941	INTERGENIC
3R	25766105	3R_25766105_SNP [dm3] 3R_29940383_SNP [dm6]	G	C	2.358e^-4	0.941	NON_SYNONYMOUS_CODING CG15523
3R	25973484	3R_25973484_SNP [dm3] 3R_30147762_SNP [dm6]	T	A	2.364e^-4	0.941	INTRON AdoR
3R	14954365	3R_14954365_DEL [dm3] 3R_19128643_DEL [dm6]	AAATGCAGAAA...	A	2.368e^-4	0.941	INTRON CG6040
2L	477754	2L_477754_SNP [dm3] 2L_477754_SNP [dm6]	G	A	2.374e^-4	0.941	NON_SYNONYMOUS_CODING cbt INTRON ush	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	485935	2L_485935_SNP [dm3] 2L_485935_SNP [dm6]	G	A	2.374e^-4	0.941	INTRON ush	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2L	485954	2L_485954_SNP [dm3] 2L_485954_SNP [dm6]	C	T	2.374e^-4	0.941	INTRON ush	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
X	6323061	X_6323061_DEL [dm3] X_6429028_DEL [dm6]	AAA	G	2.381e^-4	0.941	INTRON CG42340
3R	25783282	3R_25783282_SNP [dm3] 3R_29957560_SNP [dm6]	A	G	2.383e^-4	0.941	INTRON TkR99D
3R	22399001	3R_22399001_SNP [dm3] 3R_26573279_SNP [dm6]	G	A	2.401e^-4	0.942	INTRON scrib
3R	13648596	3R_13648596_SNP [dm3] 3R_17822874_SNP [dm6]	T	A	2.406e^-4	0.942	INTRON tinc	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	11943300	2L_11943300_SNP [dm3] 2L_11943300_SNP [dm6]	T	G	2.412e^-4	0.942	UPSTREAM Cry INTERGENIC	regulatory region REDfly_CRMs
X	10183073	X_10183073_DEL [dm3] X_10289040_DEL [dm6]	GG	G	2.415e^-4	0.942	INTRON alpha-Man-I
2R	14211929	2R_14211929_DEL [dm3] 2R_18324424_DEL [dm6]	GGCAACG	G	2.424e^-4	0.942	INTRON sbb
2L	5373054	2L_5373054_SNP [dm3] 2L_5373054_SNP [dm6]	A	G	2.427e^-4	0.942	INTERGENIC
3L	2159583	3L_2159583_SNP [dm3] 3L_2159583_SNP [dm6]	A	G	2.427e^-4	0.942	INTRON CG15822	TF binding site mE1_TFBS_inv
2L	10515826	2L_10515826_SNP [dm3] 2L_10515826_SNP [dm6]	G	A	2.435e^-4	0.942	INTRON Fatp & 1 other
2L	9078603	2L_9078603_SNP [dm3] 2L_9078603_SNP [dm6]	T	A	2.437e^-4	0.942	DOWNSTREAM CG12439 INTERGENIC
3L	18644162	3L_18644162_SNP [dm3] 3L_18651062_SNP [dm6]	T	C	2.450e^-4	0.942	INTRON MYPT-75D
3L	7084245	3L_7084245_SNP [dm3] 3L_7091145_SNP [dm6]	G	A	2.457e^-4	0.942	INTERGENIC
2L	313845	2L_313845_SNP [dm3] 2L_313845_SNP [dm6]	C	T	2.466e^-4	0.942	INTRON Plc21C	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	6989938	2L_6989938_SNP [dm3] 2L_6989938_SNP [dm6]	C	A	2.469e^-4	0.942	INTRON uif
2L	260113	2L_260113_INS [dm3] 2L_260113_INS [dm6]	A	AA	2.471e^-4	0.942	UTR_3_PRIME CG17075 INTRON CG3645
2R	17649831	2R_17649831_DEL [dm3] 2R_21762326_DEL [dm6]	TCA	T	2.472e^-4	0.942	DOWNSTREAM CR43983 INTERGENIC
3R	13960400	3R_13960400_SNP [dm3] 3R_18134678_SNP [dm6]	A	T	2.476e^-4	0.942	UTR_3_PRIME sr DOWNSTREAM sr
2L	8343989	2L_8343989_SNP [dm3] 2L_8343989_SNP [dm6]	A	G	2.480e^-4	0.942	INTRON CG14273 & 1 other
3L	2380308	3L_2380308_SNP [dm3] 3L_2380308_SNP [dm6]	A	G	2.481e^-4	0.942	INTRON CG45186
3L	14329341	3L_14329341_SNP [dm3] 3L_14336241_SNP [dm6]	C	A	2.483e^-4	0.942	INTRON fz
3R	25787085	3R_25787085_SNP [dm3] 3R_29961363_SNP [dm6]	G	C	2.488e^-4	0.942	INTRON TkR99D
2L	8343953	2L_8343953_SNP [dm3] 2L_8343953_SNP [dm6]	C	G	2.492e^-4	0.942	INTRON CG14273 EXON CR45371
2L	16293481	2L_16293481_SNP [dm3] 2L_16293481_SNP [dm6]	G	A	2.503e^-4	0.944	UPSTREAM CG13258 & 1 other EXON CR44899
2R	18284275	2R_18284275_SNP [dm3] 2R_22396770_SNP [dm6]	G	T	2.508e^-4	0.944	INTRON babos	TF binding site BDTNP1_TFBS_dl
2L	8523537	2L_8523537_SNP [dm3] 2L_8523537_SNP [dm6]	C	A	2.539e^-4	0.945	NON_SYNONYMOUS_CODING Acer	TF binding site mE1_TFBS_cad
3R	18417140	3R_18417140_SNP [dm3] 3R_22591418_SNP [dm6]	C	T	2.552e^-4	0.945	INTRON Efa6	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3R	16029632	3R_16029632_SNP [dm3] 3R_20203910_SNP [dm6]	G	A	2.554e^-4	0.945	UPSTREAM Nlg4 INTERGENIC
3R	21230222	3R_21230222_SNP [dm3] 3R_25404500_SNP [dm6]	T	G	2.554e^-4	0.945	INTRON Fur1
2L	8529353	2L_8529353_DEL [dm3] 2L_8529353_DEL [dm6]	ATAAAAA	A	2.561e^-4	0.945	UTR_5_PRIME CG17834 UPSTREAM lmgA & 1 other	TF binding site BDTNP1_TFBS_prd
X	10788228	X_10788228_SNP [dm3] X_10894195_SNP [dm6]	C	T	2.566e^-4	0.945	DOWNSTREAM CR44524 & 1 other INTERGENIC
3R	25770691	3R_25770691_SNP [dm3] 3R_29944969_SNP [dm6]	G	T	2.571e^-4	0.945	NON_SYNONYMOUS_CODING CG15523
3R	25464450	3R_25464450_SNP [dm3] 3R_29638728_SNP [dm6]	T	C	2.573e^-4	0.945	INTRON Dop1R2
3R	1714285	3R_1714285_SNP [dm3] 3R_5888563_SNP [dm6]	C	T	2.575e^-4	0.945	INTRON CG34113
X	8602687	X_8602687_SNP [dm3] X_8708654_SNP [dm6]	A	T	2.583e^-4	0.945	UPSTREAM CR44507 & 1 other DOWNSTREAM CR44508 INTERGENIC
2R	19447046	2R_19447046_SNP [dm3] 2R_23559523_SNP [dm6]	C	G	2.586e^-4	0.945	NON_SYNONYMOUS_CODING ItgalphaPS5 UPSTREAM Pi3K59F	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	6253069	3R_6253069_SNP [dm3] 3R_10427347_SNP [dm6]	C	T	2.587e^-4	0.945	INTERGENIC
2L	3867314	2L_3867314_SNP [dm3] 2L_3867314_SNP [dm6]	T	C	2.598e^-4	0.945	UTR_3_PRIME CG3964 UPSTREAM Cep97	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	21174267	3R_21174267_DEL [dm3] 3R_25348545_DEL [dm6]	GAA	G	2.609e^-4	0.945	DOWNSTREAM Fur1 INTRON Fur1
3R	26057580	3R_26057580_SNP [dm3] 3R_30231858_SNP [dm6]	C	G	2.610e^-4	0.945	INTERGENIC	TF binding site BDTNP1_TFBS_prd mE1_TFBS_inv
3L	14327987	3L_14327987_INS [dm3] 3L_14334887_INS [dm6]	T	TTTTATTTTATTTT...	2.613e^-4	0.945	INTRON fz	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	8054886	2L_8054886_SNP [dm3] 2L_8054886_SNP [dm6]	A	C	2.617e^-4	0.945	NON_SYNONYMOUS_CODING poe DOWNSTREAM CG7466	TF binding site mE1_TFBS_cad
2L	8507763	2L_8507763_SNP [dm3] 2L_8507763_SNP [dm6]	A	G	2.619e^-4	0.945	UPSTREAM Dh31 INTERGENIC
3R	17180594	3R_17180594_SNP [dm3] 3R_21354872_SNP [dm6]	T	A	2.629e^-4	0.945	DOWNSTREAM mod_mdg4_ & 6 others INTRON mod_mdg4_
X	10183077	X_10183077_SNP [dm3] X_10289044_SNP [dm6]	C	A	2.636e^-4	0.945	INTRON alpha-Man-I
2L	7158880	2L_7158880_SNP [dm3] 2L_7158880_SNP [dm6]	C	T	2.650e^-4	0.945	INTERGENIC
2R	9430323	2R_9430323_SNP [dm3] 2R_13542818_SNP [dm6]	T	A	2.654e^-4	0.945	INTRON CG6145
3R	20630930	3R_20630930_DEL [dm3] 3R_24805208_DEL [dm6]	AA	A	2.659e^-4	0.945	UTR_5_PRIME polybromo DOWNSTREAM CG5807	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	10996593	2L_10996593_SNP [dm3] 2L_10996593_SNP [dm6]	G	C	2.666e^-4	0.945	UTR_3_PRIME CG16833 DOWNSTREAM CG16833 INTRON CG16833
3R	23062084	3R_23062084_SNP [dm3] 3R_27236362_SNP [dm6]	A	C	2.670e^-4	0.945	DOWNSTREAM CG31068 INTRON CG31064
2L	9558317	2L_9558317_SNP [dm3] 2L_9558317_SNP [dm6]	C	T	2.685e^-4	0.945	INTRON jp
2L	472690	2L_472690_SNP [dm3] 2L_472690_SNP [dm6]	A	G	2.689e^-4	0.945	UPSTREAM MED15 & 1 other INTRON CG4297	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	17219649	3L_17219649_SNP [dm3] 3L_17226549_SNP [dm6]	G	C	2.690e^-4	0.945	INTRON Rbp6
2L	7011344	2L_7011344_SNP [dm3] 2L_7011344_SNP [dm6]	G	C	2.699e^-4	0.945	UPSTREAM uif & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
2L	3930446	2L_3930446_SNP [dm3] 2L_3930446_SNP [dm6]	G	C	2.706e^-4	0.945	INTRON fred
2L	489499	2L_489499_DEL [dm3] 2L_489499_DEL [dm6]	GC	G	2.710e^-4	0.945	INTRON ush
2L	8054881	2L_8054881_SNP [dm3] 2L_8054881_SNP [dm6]	G	T	2.710e^-4	0.945	NON_SYNONYMOUS_CODING poe DOWNSTREAM CG7466	TF binding site mE1_TFBS_cad
2R	7349442	2R_7349442_SNP [dm3] 2R_11461937_SNP [dm6]	A	C	2.714e^-4	0.945	UTR_3_PRIME E_Pc_	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	17219540	3L_17219540_SNP [dm3] 3L_17226440_SNP [dm6]	C	G	2.728e^-4	0.945	INTRON Rbp6
3R	21886206	3R_21886206_SNP [dm3] 3R_26060484_SNP [dm6]	T	G	2.729e^-4	0.945	DOWNSTREAM CG14551 INTRON CG14544
3L	7997717	3L_7997717_DEL [dm3] 3L_8004617_DEL [dm6]	CA	C	2.740e^-4	0.945	INTRON nmo
2R	9538009	2R_9538009_SNP [dm3] 2R_13650504_SNP [dm6]	G	T	2.743e^-4	0.945	INTRON fas
X	8815804	X_8815804_SNP [dm3] X_8921771_SNP [dm6]	G	T	2.745e^-4	0.945	INTRON rdgA
3R	10387672	3R_10387672_SNP [dm3] 3R_14561950_SNP [dm6]	A	T	2.747e^-4	0.945	UPSTREAM CG14851 DOWNSTREAM CG14850 INTERGENIC
2R	16825534	2R_16825534_SNP [dm3] 2R_20938029_SNP [dm6]	T	A	2.747e^-4	0.945	DOWNSTREAM Rx INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk mE1_TFBS_zfh1
X	19389120	X_19389120_SNP [dm3] X_19495087_SNP [dm6]	T	C	2.751e^-4	0.945	UPSTREAM CG12204 & 3 others DOWNSTREAM CR44340 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_kn
3L	12307160	3L_12307160_DEL [dm3] 3L_12314060_DEL [dm6]	AATATAGTTATTAAAT...	A	2.755e^-4	0.945	INTERGENIC	regulatory region REDfly_CRMs
2L	4019853	2L_4019853_SNP [dm3] 2L_4019853_SNP [dm6]	G	A	2.755e^-4	0.945	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	3593846	X_3593846_SNP [dm3] X_3699813_SNP [dm6]	A	T	2.760e^-4	0.945	INTRON Mnt
3L	5564722	3L_5564722_SNP [dm3] 3L_5571622_SNP [dm6]	G	A	2.768e^-4	0.945	INTRON Msr-110
3L	10768139	3L_10768139_SNP [dm3] 3L_10775039_SNP [dm6]	C	T	2.778e^-4	0.945	INTERGENIC
2L	2255947	2L_2255947_SNP [dm3] 2L_2255947_SNP [dm6]	T	C	2.787e^-4	0.945	UPSTREAM Send1 INTERGENIC
3R	3121895	3R_3121895_SNP [dm3] 3R_7296173_SNP [dm6]	G	T	2.793e^-4	0.945	INTRON rn
2L	6051153	2L_6051153_SNP [dm3] 2L_6051153_SNP [dm6]	T	C	2.795e^-4	0.945	DOWNSTREAM CG12393 INTRON CG9135	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Trl mE1_TFBS_Ubx
2L	6051631	2L_6051631_SNP [dm3] 2L_6051631_SNP [dm6]	G	T	2.795e^-4	0.945	UTR_5_PRIME CG9135	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	489330	2L_489330_SNP [dm3] 2L_489330_SNP [dm6]	C	T	2.795e^-4	0.945	INTRON ush
2L	489332	2L_489332_DEL [dm3] 2L_489332_DEL [dm6]	GACACA	G	2.795e^-4	0.945	INTRON ush
2L	489339	2L_489339_SNP [dm3] 2L_489339_SNP [dm6]	T	A	2.795e^-4	0.945	INTRON ush
2L	489340	2L_489340_SNP [dm3] 2L_489340_SNP [dm6]	C	T	2.795e^-4	0.945	INTRON ush
X	19388556	X_19388556_SNP [dm3] X_19494523_SNP [dm6]	G	A	2.800e^-4	0.945	UTR_3_PRIME ksh UPSTREAM CG12204 & 2 others DOWNSTREAM CR44340	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	2178774	3L_2178774_SNP [dm3] 3L_2178774_SNP [dm6]	G	C	2.804e^-4	0.945	INTERGENIC
3L	2077298	3L_2077298_SNP [dm3] 3L_2077298_SNP [dm6]	T	C	2.808e^-4	0.945	SYNONYMOUS_CODING sls INTRON sls	TF binding site mE1_TFBS_sens
2L	3876933	2L_3876933_SNP [dm3] 2L_3876933_SNP [dm6]	A	G	2.814e^-4	0.945	INTRON capu
2L	6901592	2L_6901592_SNP [dm3] 2L_6901592_SNP [dm6]	T	A	2.816e^-4	0.945	UPSTREAM mir-932 INTRON Nlg2
3R	15751626	3R_15751626_SNP [dm3] 3R_19925904_SNP [dm6]	A	T	2.823e^-4	0.945	UPSTREAM CG4462 DOWNSTREAM CG4459 INTERGENIC
2L	17998459	2L_17998459_SNP [dm3] 2L_17998459_SNP [dm6]	G	C	2.823e^-4	0.945	INTERGENIC
2R	9896026	2R_9896026_SNP [dm3] 2R_14008521_SNP [dm6]	A	G	2.830e^-4	0.945	UPSTREAM mam INTRON mam	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	3754810	X_3754810_SNP [dm3] X_3860777_SNP [dm6]	C	G	2.833e^-4	0.945	EXON roX1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	11796228	2R_11796228_SNP [dm3] 2R_15908723_SNP [dm6]	C	G	2.836e^-4	0.945	INTRON sli	TF binding site mE1_TFBS_chinmo
3R	25755230	3R_25755230_SNP [dm3] 3R_29929508_SNP [dm6]	T	C	2.842e^-4	0.945	SYNONYMOUS_CODING CG31202 DOWNSTREAM CG15522
2R	18594982	2R_18594982_SNP [dm3] 2R_22707477_SNP [dm6]	T	C	2.842e^-4	0.945	SYNONYMOUS_CODING Obp58d UPSTREAM Obp58c & 1 other DOWNSTREAM CR43735
2L	8507814	2L_8507814_SNP [dm3] 2L_8507814_SNP [dm6]	G	A	2.847e^-4	0.945	UPSTREAM Dh31 INTERGENIC
2L	3930434	2L_3930434_SNP [dm3] 2L_3930434_SNP [dm6]	T	C	2.853e^-4	0.945	INTRON fred
2R	19940891	2R_19940891_SNP [dm3] 2R_24053368_SNP [dm6]	C	A	2.856e^-4	0.945	SPLICE_SITE_REGION ppk29 DOWNSTREAM sei INTRON ppk29
3R	3128543	3R_3128543_SNP [dm3] 3R_7302821_SNP [dm6]	T	A	2.861e^-4	0.945	UPSTREAM rn INTRON rn
2L	7445390	2L_7445390_SNP [dm3] 2L_7445390_SNP [dm6]	G	A	2.888e^-4	0.945	UTR_3_PRIME CG5973 & 1 other DOWNSTREAM CG5973
3L	18255065	3L_18255065_SNP [dm3] 3L_18261965_SNP [dm6]	A	G	2.889e^-4	0.945	INTERGENIC
2L	11020207	2L_11020207_DEL [dm3] 2L_11020207_DEL [dm6]	CC	C	2.897e^-4	0.945	INTRON Samuel
2R	12753996	2R_12753996_SNP [dm3] 2R_16866491_SNP [dm6]	C	T	2.903e^-4	0.945	SYNONYMOUS_CODING Psi	TF binding site mE1_TFBS_chinmo
2L	489326	2L_489326_INS [dm3] 2L_489326_INS [dm6]	C	GT	2.909e^-4	0.945	INTRON ush
2L	489329	2L_489329_SNP [dm3] 2L_489329_SNP [dm6]	A	T	2.909e^-4	0.945	INTRON ush
2L	6908828	2L_6908828_SNP [dm3] 2L_6908828_SNP [dm6]	T	G	2.927e^-4	0.945	SYNONYMOUS_CODING Rat1 UPSTREAM CG13773	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	2455359	3R_2455359_SNP [dm3] 3R_6629637_SNP [dm6]	T	G	2.930e^-4	0.945	UPSTREAM sunz & 1 other INTERGENIC
X	3760648	X_3760648_SNP [dm3] X_3866615_SNP [dm6]	T	C	2.937e^-4	0.945	UTR_5_PRIME yin INTRON yin	TF binding site mE1_TFBS_Trl
2L	2804779	2L_2804779_DEL [dm3] 2L_2804779_DEL [dm6]	TT	T	2.941e^-4	0.945	UPSTREAM daw INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2L	4019850	2L_4019850_SNP [dm3] 2L_4019850_SNP [dm6]	T	C	2.941e^-4	0.945	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	16440936	2R_16440936_SNP [dm3] 2R_20553431_SNP [dm6]	A	C	2.944e^-4	0.945	INTERGENIC
2L	8295528	2L_8295528_DEL [dm3] 2L_8295528_DEL [dm6]	TAATTAAGCAATG...	T	2.953e^-4	0.945	INTRON Btk29A EXON CR43752
X	13432376	X_13432376_SNP [dm3] X_13538343_SNP [dm6]	A	C	2.957e^-4	0.945	INTERGENIC
2R	9841395	2R_9841395_SNP [dm3] 2R_13953890_SNP [dm6]	T	C	2.958e^-4	0.945	UPSTREAM mRpL53 & 1 other INTRON AGO1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2R	18422450	2R_18422450_SNP [dm3] 2R_22534945_SNP [dm6]	A	G	2.970e^-4	0.945	INTRON px
2L	492811	2L_492811_SNP [dm3] 2L_492811_SNP [dm6]	A	G	2.974e^-4	0.945	INTRON ush	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_zfh1
3R	25665730	3R_25665730_SNP [dm3] 3R_29840008_SNP [dm6]	G	A	2.981e^-4	0.945	INTERGENIC	TF binding site mE1_TFBS_inv
X	2734256	X_2734256_SNP [dm3] X_2840223_SNP [dm6]	T	C	2.987e^-4	0.945	INTRON kirre
X	4768412	X_4768412_SNP [dm3] X_4874379_SNP [dm6]	T	C	2.988e^-4	0.945	INTRON CG42594 EXON CR43495
2L	12480446	2L_12480446_SNP [dm3] 2L_12480446_SNP [dm6]	A	G	2.990e^-4	0.945	INTRON bun	TF binding site BDTNP1_TFBS_dl
3L	5903135	3L_5903135_SNP [dm3] 3L_5910035_SNP [dm6]	G	A	3.004e^-4	0.945	DOWNSTREAM CG13288 INTRON CG13288
2L	3930445	2L_3930445_SNP [dm3] 2L_3930445_SNP [dm6]	C	T	3.007e^-4	0.945	INTRON fred
3L	19527880	3L_19527880_SNP [dm3] 3L_19534780_SNP [dm6]	C	T	3.022e^-4	0.945	NON_SYNONYMOUS_CODING Cpr76Bd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	17234483	3R_17234483_SNP [dm3] 3R_21408761_SNP [dm6]	T	C	3.030e^-4	0.945	UPSTREAM CheB93b DOWNSTREAM CheB93a INTERGENIC	TF binding site mE1_TFBS_bab1
2L	8612714	2L_8612714_SNP [dm3] 2L_8612714_SNP [dm6]	A	T	3.032e^-4	0.945	INTRON Sema-1a
2R	16825867	2R_16825867_SNP [dm3] 2R_20938362_SNP [dm6]	T	A	3.045e^-4	0.945	INTERGENIC	silencer mE1_HDAC_PRE TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk mE1_TFBS_zfh1
2R	20561378	2R_20561378_SNP [dm3] 2R_24673855_SNP [dm6]	T	A	3.048e^-4	0.945	DOWNSTREAM Mmp1 INTRON Mmp1
3R	26655606	3R_26655606_SNP [dm3] 3R_30829884_SNP [dm6]	G	A	3.050e^-4	0.945	INTRON CG15544
2R	12754050	2R_12754050_SNP [dm3] 2R_16866545_SNP [dm6]	T	C	3.051e^-4	0.945	SYNONYMOUS_CODING Psi	TF binding site mE1_TFBS_chinmo
2R	14760397	2R_14760397_SNP [dm3] 2R_18872892_SNP [dm6]	C	A	3.058e^-4	0.945	INTERGENIC
2R	16067993	2R_16067993_SNP [dm3] 2R_20180488_SNP [dm6]	G	A	3.064e^-4	0.945	INTERGENIC
X	15421658	X_15421658_SNP [dm3] X_15527625_SNP [dm6]	A	G	3.065e^-4	0.945	INTRON Ac13E
3R	25751732	3R_25751732_SNP [dm3] 3R_29926010_SNP [dm6]	G	A	3.079e^-4	0.945	SYNONYMOUS_CODING Jon99Ci
2L	456513	2L_456513_SNP [dm3] 2L_456513_SNP [dm6]	T	A	3.084e^-4	0.945	INTRON CG4133	TF binding site mE1_TFBS_cad
2L	458606	2L_458606_SNP [dm3] 2L_458606_SNP [dm6]	G	A	3.084e^-4	0.945	UTR_3_PRIME CG4133 DOWNSTREAM CG4297	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	17163604	X_17163604_SNP [dm3] X_17269571_SNP [dm6]	A	T	3.088e^-4	0.945	INTRON f
2L	489244	2L_489244_DEL [dm3] 2L_489244_DEL [dm6]	TT	T	3.096e^-4	0.945	INTRON ush	TF binding site mE1_TFBS_Trl
3R	21228765	3R_21228765_SNP [dm3] 3R_25403043_SNP [dm6]	T	C	3.101e^-4	0.945	INTRON Fur1
X	3012235	X_3012235_SNP [dm3] X_3118202_SNP [dm6]	A	T	3.119e^-4	0.945	INTRON kirre	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	3272741	3R_3272741_SNP [dm3] 3R_7447019_SNP [dm6]	G	C	3.132e^-4	0.945	INTERGENIC
2L	10515745	2L_10515745_SNP [dm3] 2L_10515745_SNP [dm6]	A	G	3.134e^-4	0.945	INTRON Fatp & 1 other
3R	25987785	3R_25987785_SNP [dm3] 3R_30162063_SNP [dm6]	G	A	3.143e^-4	0.945	INTERGENIC
3R	25987794	3R_25987794_SNP [dm3] 3R_30162072_SNP [dm6]	C	A	3.143e^-4	0.945	INTERGENIC
2L	8295563	2L_8295563_SNP [dm3] 2L_8295563_SNP [dm6]	G	T	3.147e^-4	0.945	INTRON Btk29A EXON CR43752
3L	8529702	3L_8529702_SNP [dm3] 3L_8536602_SNP [dm6]	C	G	3.160e^-4	0.945	SYNONYMOUS_CODING ergic53	TF binding site mE1_TFBS_cad
3L	8545978	3L_8545978_SNP [dm3] 3L_8552878_SNP [dm6]	G	T	3.160e^-4	0.945	INTRON rhea
2L	8525341	2L_8525341_SNP [dm3] 2L_8525341_SNP [dm6]	C	A	3.165e^-4	0.945	UTR_3_PRIME Acer & 2 others DOWNSTREAM lmgA & 2 others
X	4867397	X_4867397_SNP [dm3] X_4973364_SNP [dm6]	A	G	3.166e^-4	0.945	INTRON CR44833
2L	3931877	2L_3931877_SNP [dm3] 2L_3931877_SNP [dm6]	A	G	3.168e^-4	0.945	INTRON fred
2L	8629367	2L_8629367_SNP [dm3] 2L_8629367_SNP [dm6]	C	T	3.169e^-4	0.945	INTRON Sema-1a
3R	11689804	3R_11689804_SNP [dm3] 3R_15864082_SNP [dm6]	T	C	3.177e^-4	0.945	INTRON CG31183
2L	8515314	2L_8515314_SNP [dm3] 2L_8515314_SNP [dm6]	A	C	3.184e^-4	0.945	UPSTREAM CG13097 INTRON PIG-U	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3R	25779752	3R_25779752_INS [dm3] 3R_29954030_INS [dm6]	C	CTGGACAC	3.193e^-4	0.945	INTRON TkR99D
2R	16370048	2R_16370048_SNP [dm3] 2R_20482543_SNP [dm6]	G	T	3.197e^-4	0.945	INTERGENIC
2R	2685166	2R_2685166_DEL [dm3] 2R_6797661_DEL [dm6]	GCTTGTGTGTG...	G	3.199e^-4	0.945	INTRON Epac
2L	10514577	2L_10514577_SNP [dm3] 2L_10514577_SNP [dm6]	G	A	3.201e^-4	0.945	INTRON Fatp & 1 other
3L	18255064	3L_18255064_SNP [dm3] 3L_18261964_SNP [dm6]	A	T	3.201e^-4	0.945	INTERGENIC
2L	11155192	2L_11155192_SNP [dm3] 2L_11155192_SNP [dm6]	A	C	3.209e^-4	0.945	DOWNSTREAM Ca-beta INTRON CG6287
3R	14979279	3R_14979279_SNP [dm3] 3R_19153557_SNP [dm6]	C	T	3.209e^-4	0.945	UTR_5_PRIME CG5835 DOWNSTREAM CG11779	TF binding site mE1_TFBS_h mE1_TFBS_HSA
3L	9627943	3L_9627943_SNP [dm3] 3L_9634843_SNP [dm6]	G	T	3.213e^-4	0.945	SYNONYMOUS_CODING fry	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	9127753	3L_9127753_SNP [dm3] 3L_9134653_SNP [dm6]	C	T	3.213e^-4	0.945	UTR_5_PRIME Dhpr UPSTREAM Dhpr & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	19276249	2L_19276249_SNP [dm3] 2L_19276249_SNP [dm6]	T	G	3.216e^-4	0.945	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	767198	2R_767198_SNP [dm3] 2R_4879693_SNP [dm6]	T	C	3.219e^-4	0.945	INTERGENIC
X	19389092	X_19389092_SNP [dm3] X_19495059_SNP [dm6]	G	A	3.225e^-4	0.945	UPSTREAM CG12204 & 3 others DOWNSTREAM CR44340 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_z mE1_TFBS_kn
2R	16825632	2R_16825632_SNP [dm3] 2R_20938127_SNP [dm6]	T	C	3.225e^-4	0.945	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk mE1_TFBS_zfh1
2L	3848024	2L_3848024_SNP [dm3] 2L_3848024_SNP [dm6]	G	T	3.230e^-4	0.945	INTERGENIC
2L	8510271	2L_8510271_SNP [dm3] 2L_8510271_SNP [dm6]	A	G	3.232e^-4	0.945	INTRON CG13096	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	21182313	3R_21182313_SNP [dm3] 3R_25356591_SNP [dm6]	G	A	3.233e^-4	0.945	INTRON Fur1	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	4768491	X_4768491_SNP [dm3] X_4874458_SNP [dm6]	G	C	3.233e^-4	0.945	UPSTREAM CR43495 INTRON CG42594
2L	11943326	2L_11943326_SNP [dm3] 2L_11943326_SNP [dm6]	A	C	3.235e^-4	0.945	UPSTREAM Cry INTERGENIC	regulatory region REDfly_CRMs
2L	14081884	2L_14081884_SNP [dm3] 2L_14081884_SNP [dm6]	A	T	3.237e^-4	0.945	INTRON nAChRalpha5
3R	25783184	3R_25783184_SNP [dm3] 3R_29957462_SNP [dm6]	G	A	3.249e^-4	0.945	INTRON TkR99D
3R	21228210	3R_21228210_SNP [dm3] 3R_25402488_SNP [dm6]	C	T	3.256e^-4	0.945	INTRON Fur1
2L	8345146	2L_8345146_SNP [dm3] 2L_8345146_SNP [dm6]	T	G	3.257e^-4	0.945	UPSTREAM CR45371 DOWNSTREAM CG14273 INTERGENIC
2L	8954058	2L_8954058_SNP [dm3] 2L_8954058_SNP [dm6]	C	T	3.259e^-4	0.945	SYNONYMOUS_CODING CG31886
X	14384632	X_14384632_SNP [dm3] X_14490599_SNP [dm6]	T	C	3.272e^-4	0.945	INTERGENIC
2L	8529328	2L_8529328_SNP [dm3] 2L_8529328_SNP [dm6]	G	A	3.277e^-4	0.945	UTR_5_PRIME CG17834 UPSTREAM lmgA & 1 other
3R	8617844	3R_8617844_SNP [dm3] 3R_12792122_SNP [dm6]	T	A	3.280e^-4	0.945	INTERGENIC
X	3783427	X_3783427_SNP [dm3] X_3889394_SNP [dm6]	C	T	3.281e^-4	0.945	SYNONYMOUS_CODING CG15239	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8295606	2L_8295606_SNP [dm3] 2L_8295606_SNP [dm6]	G	C	3.290e^-4	0.945	INTRON Btk29A EXON CR43752
3L	1064904	3L_1064904_SNP [dm3] 3L_1064904_SNP [dm6]	G	A	3.290e^-4	0.945	INTRON bab1	TF binding site BDTNP1_TFBS_dl
3R	721399	3R_721399_SNP [dm3] 3R_4895677_SNP [dm6]	T	C	3.292e^-4	0.945	UPSTREAM CR45580 INTERGENIC
3R	8705559	3R_8705559_SNP [dm3] 3R_12879837_SNP [dm6]	G	A	3.297e^-4	0.945	INTERGENIC
3R	15190705	3R_15190705_SNP [dm3] 3R_19364983_SNP [dm6]	C	T	3.299e^-4	0.945	INTERGENIC
3R	18246101	3R_18246101_SNP [dm3] 3R_22420379_SNP [dm6]	G	C	3.300e^-4	0.945	UPSTREAM mats INTRON Nop56	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	10133277	2L_10133277_SNP [dm3] 2L_10133277_SNP [dm6]	A	T	3.304e^-4	0.945	INTRON CG44153
2L	3873458	2L_3873458_SNP [dm3] 2L_3873458_SNP [dm6]	A	G	3.313e^-4	0.945	SYNONYMOUS_CODING capu UPSTREAM CG31957	TF binding site mE1_TFBS_chinmo
2L	9077397	2L_9077397_SNP [dm3] 2L_9077397_SNP [dm6]	T	C	3.314e^-4	0.945	SYNONYMOUS_CODING CG12439
3R	2565591	3R_2565591_SNP [dm3] 3R_6739869_SNP [dm6]	C	T	3.317e^-4	0.945	SYNONYMOUS_CODING pb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
3L	19105496	3L_19105496_SNP [dm3] 3L_19112396_SNP [dm6]	C	A	3.320e^-4	0.945	INTRON CG14082
3R	17180541	3R_17180541_DEL [dm3] 3R_21354819_DEL [dm6]	TAAACGTATACATATATT...	T	3.329e^-4	0.946	DOWNSTREAM mod_mdg4_ & 6 others INTRON mod_mdg4_
3L	14447335	3L_14447335_SNP [dm3] 3L_14454235_SNP [dm6]	G	T	3.339e^-4	0.946	INTRON bbg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	483064	2L_483064_SNP [dm3] 2L_483064_SNP [dm6]	G	A	3.339e^-4	0.946	INTRON ush	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	5199794	X_5199794_SNP [dm3] X_5305761_SNP [dm6]	G	T	3.354e^-4	0.949	UPSTREAM CG3323 DOWNSTREAM CG17764 INTRON CG42749
3R	26604892	3R_26604892_SNP [dm3] 3R_30779170_SNP [dm6]	G	A	3.367e^-4	0.95	INTRON zfh1
3R	25016805	3R_25016805_SNP [dm3] 3R_29191083_SNP [dm6]	T	A	3.379e^-4	0.95	INTRON CG14509
2L	17118646	2L_17118646_SNP [dm3] 2L_17118646_SNP [dm6]	A	C	3.386e^-4	0.95	INTERGENIC
2L	13623423	2L_13623423_SNP [dm3] 2L_13623423_SNP [dm6]	A	C	3.387e^-4	0.95	INTRON kuz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	18253165	3L_18253165_SNP [dm3] 3L_18260065_SNP [dm6]	C	G	3.393e^-4	0.95	INTERGENIC
X	3747618	X_3747618_SNP [dm3] X_3853585_SNP [dm6]	T	C	3.397e^-4	0.95	SYNONYMOUS_CODING ec	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	452915	2L_452915_SNP [dm3] 2L_452915_SNP [dm6]	G	A	3.398e^-4	0.95	UTR_5_PRIME crq UPSTREAM CG4164 & 1 other INTRON crq	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Ubx
3L	4947246	3L_4947246_SNP [dm3] 3L_4947246_SNP [dm6]	T	C	3.400e^-4	0.95	INTRON Con
3R	18246104	3R_18246104_SNP [dm3] 3R_22420382_SNP [dm6]	G	A	3.403e^-4	0.95	SPLICE_SITE_REGION Nop56 UPSTREAM mats INTRON Nop56	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	13512233	2R_13512233_SNP [dm3] 2R_17624728_SNP [dm6]	C	T	3.438e^-4	0.956	INTRON CG10936
3L	14232154	3L_14232154_SNP [dm3] 3L_14239054_SNP [dm6]	T	C	3.447e^-4	0.956	DOWNSTREAM CG7906 EXON CR45399
3R	17929158	3R_17929158_SNP [dm3] 3R_22103436_SNP [dm6]	A	G	3.447e^-4	0.956	NON_SYNONYMOUS_CODING CG13407 INTRON CG5778
2L	8528721	2L_8528721_SNP [dm3] 2L_8528721_SNP [dm6]	A	G	3.448e^-4	0.956	UPSTREAM lmgB & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	11019842	2L_11019842_SNP [dm3] 2L_11019842_SNP [dm6]	C	A	3.451e^-4	0.956	INTRON Samuel
3R	20928345	3R_20928345_SNP [dm3] 3R_25102623_SNP [dm6]	C	T	3.456e^-4	0.956	SYNONYMOUS_CODING CG45095 DOWNSTREAM CG33095 & 1 other
3L	2180793	3L_2180793_SNP [dm3] 3L_2180793_SNP [dm6]	G	C	3.463e^-4	0.957	INTERGENIC
2L	1477028	2L_1477028_SNP [dm3] 2L_1477028_SNP [dm6]	T	A	3.481e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_sens
3R	13655312	3R_13655312_SNP [dm3] 3R_17829590_SNP [dm6]	G	A	3.490e^-4	0.959	INTRON tinc
3R	5208175	3R_5208175_SNP [dm3] 3R_9382453_SNP [dm6]	C	T	3.498e^-4	0.959	INTRON FER
3L	15277798	3L_15277798_SNP [dm3] 3L_15284698_SNP [dm6]	A	T	3.509e^-4	0.959	INTERGENIC
2L	8295602	2L_8295602_INS [dm3] 2L_8295602_INS [dm6]	A	AAAACAAAGGTGATAAAG...	3.511e^-4	0.959	INTRON Btk29A EXON CR43752
3R	3272716	3R_3272716_DEL [dm3] 3R_7446994_DEL [dm6]	GCCTGGGACTTTATGTC...	AA	3.514e^-4	0.959	INTERGENIC
2R	5625252	2R_5625252_SNP [dm3] 2R_9737747_SNP [dm6]	T	C	3.518e^-4	0.959	INTRON sqa
3R	19916538	3R_19916538_SNP [dm3] 3R_24090816_SNP [dm6]	T	G	3.528e^-4	0.959	INTRON 4EHP
3R	26377518	3R_26377518_SNP [dm3] 3R_30551796_SNP [dm6]	G	A	3.534e^-4	0.959	INTRON tmod
2R	11264245	2R_11264245_SNP [dm3] 2R_15376740_SNP [dm6]	T	A	3.540e^-4	0.959	UTR_3_PRIME dup UPSTREAM CR43186	TF binding site mE1_TFBS_cad
3R	8704205	3R_8704205_SNP [dm3] 3R_12878483_SNP [dm6]	T	C	3.546e^-4	0.959	INTERGENIC
3L	4590908	3L_4590908_SNP [dm3] 3L_4590908_SNP [dm6]	A	G	3.548e^-4	0.959	UTR_3_PRIME CG42540 DOWNSTREAM CG42540
2R	731487	2R_731487_DEL [dm3] 2R_4843982_DEL [dm6]	ATTCGACGCAATTCTCGGCA...	A	3.549e^-4	0.959	INTERGENIC	transposable element FlyBase
2L	15097054	2L_15097054_SNP [dm3] 2L_15097054_SNP [dm6]	T	G	3.554e^-4	0.959	DOWNSTREAM CG15270 INTERGENIC
3R	3121860	3R_3121860_INS [dm3] 3R_7296138_INS [dm6]	T	TAGTTA	3.568e^-4	0.959	INTRON rn
3R	21181247	3R_21181247_SNP [dm3] 3R_25355525_SNP [dm6]	C	T	3.572e^-4	0.959	SYNONYMOUS_CODING Fur1 INTRON Fur1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	3136956	3L_3136956_SNP [dm3] 3L_3136956_SNP [dm6]	C	A	3.608e^-4	0.959	INTRON CG11537
2L	15206306	2L_15206306_SNP [dm3] 2L_15206306_SNP [dm6]	G	A	3.608e^-4	0.959	INTERGENIC
3R	20011874	3R_20011874_SNP [dm3] 3R_24186152_SNP [dm6]	T	C	3.609e^-4	0.959	UPSTREAM CHORD INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
2R	13447287	2R_13447287_SNP [dm3] 2R_17559782_SNP [dm6]	G	A	3.614e^-4	0.959	INTRON Klp54D
2L	10481726	2L_10481726_SNP [dm3] 2L_10481726_SNP [dm6]	G	A	3.616e^-4	0.959	INTRON RluA-2
3L	2202523	3L_2202523_SNP [dm3] 3L_2202523_SNP [dm6]	T	A	3.638e^-4	0.959	INTERGENIC
2L	310727	2L_310727_SNP [dm3] 2L_310727_SNP [dm6]	T	C	3.645e^-4	0.959	INTRON Plc21C	TF binding site mE1_TFBS_Trl
2L	4874572	2L_4874572_SNP [dm3] 2L_4874572_SNP [dm6]	T	G	3.647e^-4	0.959	UTR_3_PRIME pog INTRON pog
3R	25762183	3R_25762183_SNP [dm3] 3R_29936461_SNP [dm6]	T	C	3.648e^-4	0.959	SYNONYMOUS_CODING CG15523 UPSTREAM eIF2B-alpha	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	9918834	X_9918834_SNP [dm3] X_10024801_SNP [dm6]	G	A	3.649e^-4	0.959	INTRON Cht6
3R	22871551	3R_22871551_SNP [dm3] 3R_27045829_SNP [dm6]	T	C	3.653e^-4	0.959	INTRON RYa-R
2L	19270845	2L_19270845_SNP [dm3] 2L_19270845_SNP [dm6]	A	G	3.660e^-4	0.959	INTRON CR44190
2L	12423704	2L_12423704_SNP [dm3] 2L_12423704_SNP [dm6]	G	T	3.663e^-4	0.959	UPSTREAM vir-1 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	25759017	3R_25759017_SNP [dm3] 3R_29933295_SNP [dm6]	C	T	3.676e^-4	0.959	UTR_5_PRIME CG42557 & 1 other UPSTREAM Cog7	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	14032628	3L_14032628_SNP [dm3] 3L_14039528_SNP [dm6]	G	A	3.687e^-4	0.959	SYNONYMOUS_CODING Hsc70Cb	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	2670266	2L_2670266_SNP [dm3] 2L_2670266_SNP [dm6]	G	A	3.696e^-4	0.959	SYNONYMOUS_CODING Gr23a UPSTREAM Gr23a	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	17831035	3R_17831035_SNP [dm3] 3R_22005313_SNP [dm6]	C	T	3.702e^-4	0.959	SYNONYMOUS_CODING Eip93F	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	9524953	3R_9524953_SNP [dm3] 3R_13699231_SNP [dm6]	C	T	3.711e^-4	0.959	SYNONYMOUS_CODING f-cup UTR_5_PRIME f-cup UPSTREAM f-cup INTRON f-cup	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
2R	14439985	2R_14439985_SNP [dm3] 2R_18552480_SNP [dm6]	G	C	3.713e^-4	0.959	INTERGENIC
2L	8941311	2L_8941311_SNP [dm3] 2L_8941311_SNP [dm6]	C	T	3.718e^-4	0.959	SYNONYMOUS_CODING CG9510 DOWNSTREAM CG9515	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	25779472	3R_25779472_SNP [dm3] 3R_29953750_SNP [dm6]	G	A	3.718e^-4	0.959	INTRON TkR99D
3L	13162117	3L_13162117_SNP [dm3] 3L_13169017_SNP [dm6]	G	A	3.724e^-4	0.959	INTERGENIC
X	8710179	X_8710179_SNP [dm3] X_8816146_SNP [dm6]	T	C	3.737e^-4	0.959	INTERGENIC
3R	11689817	3R_11689817_SNP [dm3] 3R_15864095_SNP [dm6]	C	T	3.750e^-4	0.959	INTRON CG31183
3R	11689820	3R_11689820_MNP [dm3] 3R_15864098_MNP [dm6]	CCA	GAT	3.750e^-4	0.959	INTRON CG31183
3R	11689824	3R_11689824_MNP [dm3] 3R_15864102_MNP [dm6]	GGGAA	TTATT	3.750e^-4	0.959	INTRON CG31183
3R	21337854	3R_21337854_SNP [dm3] 3R_25512132_SNP [dm6]	G	C	3.763e^-4	0.959	INTERGENIC
3R	16575712	3R_16575712_SNP [dm3] 3R_20749990_SNP [dm6]	C	G	3.764e^-4	0.959	UPSTREAM Prosalpha4T1 INTRON CG42322	TF binding site BDTNP1_TFBS_twi
3L	11220588	3L_11220588_SNP [dm3] 3L_11227488_SNP [dm6]	T	C	3.765e^-4	0.959	INTRON CG42671
3R	25978210	3R_25978210_SNP [dm3] 3R_30152488_SNP [dm6]	G	A	3.771e^-4	0.959	DOWNSTREAM CG11498 INTRON CG15529	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	25786578	3R_25786578_SNP [dm3] 3R_29960856_SNP [dm6]	G	T	3.772e^-4	0.959	INTRON TkR99D
3R	19916448	3R_19916448_SNP [dm3] 3R_24090726_SNP [dm6]	C	A	3.791e^-4	0.959	INTRON 4EHP
X	719254	X_719254_SNP [dm3] X_825221_SNP [dm6]	C	T	3.795e^-4	0.959	INTRON CG43867	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
3L	4352895	3L_4352895_SNP [dm3] 3L_4352895_SNP [dm6]	A	C	3.817e^-4	0.959	INTRON Cip4
3R	26388199	3R_26388199_DEL [dm3] 3R_30562477_DEL [dm6]	CA	C	3.818e^-4	0.959	UPSTREAM tmod INTRON tmod	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
2L	8295562	2L_8295562_SNP [dm3] 2L_8295562_SNP [dm6]	C	A	3.821e^-4	0.959	INTRON Btk29A EXON CR43752
3R	25769002	3R_25769002_SNP [dm3] 3R_29943280_SNP [dm6]	C	G	3.835e^-4	0.959	NON_SYNONYMOUS_CODING CG15523
2L	4653478	2L_4653478_SNP [dm3] 2L_4653478_SNP [dm6]	A	T	3.845e^-4	0.959	DOWNSTREAM CG3355 INTERGENIC
3L	14391890	3L_14391890_SNP [dm3] 3L_14398790_SNP [dm6]	G	A	3.854e^-4	0.959	INTERGENIC
2L	7249973	2L_7249973_SNP [dm3] 2L_7249973_SNP [dm6]	G	A	3.859e^-4	0.959	UPSTREAM Ndae1 DOWNSTREAM CG13786 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	9261920	3L_9261920_SNP [dm3] 3L_9268820_SNP [dm6]	A	G	3.863e^-4	0.959	INTRON GluRIB
3L	7895204	3L_7895204_DEL [dm3] 3L_7902104_DEL [dm6]	AC	A	3.863e^-4	0.959	INTRON pbl
X	4571328	X_4571328_SNP [dm3] X_4677295_SNP [dm6]	A	G	3.867e^-4	0.959	INTRON rap	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	9823172	2R_9823172_SNP [dm3] 2R_13935667_SNP [dm6]	A	G	3.872e^-4	0.959	INTRON shot	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	2702368	3L_2702368_SNP [dm3] 3L_2702368_SNP [dm6]	C	T	3.879e^-4	0.959	INTRON Fife
2R	12680261	2R_12680261_SNP [dm3] 2R_16792756_SNP [dm6]	G	T	3.889e^-4	0.959	NON_SYNONYMOUS_CODING CG15919 DOWNSTREAM CG15615 & 1 other
X	15265516	X_15265516_SNP [dm3] X_15371483_SNP [dm6]	A	G	3.896e^-4	0.959	INTRON acj6
X	6723665	X_6723665_SNP [dm3] X_6829632_SNP [dm6]	A	T	3.913e^-4	0.959	SYNONYMOUS_CODING nonC	TF binding site mE1_TFBS_chinmo
2L	488456	2L_488456_SNP [dm3] 2L_488456_SNP [dm6]	A	T	3.924e^-4	0.959	INTRON ush	TF binding site mE1_TFBS_Trl
X	9111594	X_9111594_SNP [dm3] X_9217561_SNP [dm6]	T	G	3.927e^-4	0.959	DOWNSTREAM t & 1 other INTERGENIC
3L	11173165	3L_11173165_INS [dm3] 3L_11180065_INS [dm6]	A	TC	3.937e^-4	0.959	INTRON GlcAT-P
2L	19273516	2L_19273516_SNP [dm3] 2L_19273516_SNP [dm6]	T	C	3.942e^-4	0.959	UPSTREAM CR44190 INTERGENIC
2L	16504424	2L_16504424_SNP [dm3] 2L_16504424_SNP [dm6]	A	G	3.949e^-4	0.959	INTRON Tpr2
3R	25501996	3R_25501996_SNP [dm3] 3R_29676274_SNP [dm6]	A	G	3.952e^-4	0.959	SYNONYMOUS_CODING Cap-D2 UPSTREAM Bub3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_sens
3L	9220360	3L_9220360_SNP [dm3] 3L_9227260_SNP [dm6]	C	G	3.957e^-4	0.959	INTERGENIC
X	15731699	X_15731699_SNP [dm3] X_15837666_SNP [dm6]	G	A	3.960e^-4	0.959	UPSTREAM CG8565 DOWNSTREAM CG32582 INTERGENIC
2L	9053644	2L_9053644_SNP [dm3] 2L_9053644_SNP [dm6]	G	A	3.962e^-4	0.959	INTRON CG31708
X	569303	X_569303_SNP [dm3] X_675270_SNP [dm6]	A	G	3.963e^-4	0.959	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	17638502	3R_17638502_SNP [dm3] 3R_21812780_SNP [dm6]	C	T	3.963e^-4	0.959	INTRON CASK
2L	15779226	2L_15779226_SNP [dm3] 2L_15779226_SNP [dm6]	A	C	3.969e^-4	0.959	INTERGENIC
2R	17044100	2R_17044100_SNP [dm3] 2R_21156595_SNP [dm6]	G	T	3.976e^-4	0.959	INTRON CG30389	TF binding site BDTNP1_TFBS_twi
2L	19232506	2L_19232506_SNP [dm3] 2L_19232506_SNP [dm6]	A	G	3.976e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	13434233	3R_13434233_SNP [dm3] 3R_17608511_SNP [dm6]	G	T	3.981e^-4	0.959	UTR_3_PRIME sll UPSTREAM CG14329
3R	25762294	3R_25762294_SNP [dm3] 3R_29936572_SNP [dm6]	T	C	3.982e^-4	0.959	SYNONYMOUS_CODING CG15523 UPSTREAM eIF2B-alpha	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	15655712	3R_15655712_SNP [dm3] 3R_19829990_SNP [dm6]	C	A	3.982e^-4	0.959	INTRON bnl
X	4768487	X_4768487_INS [dm3] X_4874454_INS [dm6]	A	AAC	3.993e^-4	0.959	UPSTREAM CR43495 INTRON CG42594
2L	3892596	2L_3892596_SNP [dm3] 2L_3892596_SNP [dm6]	A	G	3.997e^-4	0.959	INTRON capu
2R	8423549	2R_8423549_SNP [dm3] 2R_12536044_SNP [dm6]	C	T	3.997e^-4	0.959	INTRON fra	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	1839538	3R_1839538_SNP [dm3] 3R_6013816_SNP [dm6]	A	C	3.999e^-4	0.959	INTERGENIC
2R	2606874	2R_2606874_SNP [dm3] 2R_6719369_SNP [dm6]	A	G	4.003e^-4	0.959	SYNONYMOUS_CODING Zip42C.2	TF binding site mE1_TFBS_cad
3L	7597849	3L_7597849_SNP [dm3] 3L_7604749_SNP [dm6]	C	A	4.011e^-4	0.959	UPSTREAM CG33275 INTRON CG33275
3L	18542881	3L_18542881_SNP [dm3] 3L_18549781_SNP [dm6]	A	T	4.013e^-4	0.959	INTERGENIC
3R	23884709	3R_23884709_SNP [dm3] 3R_28058987_SNP [dm6]	G	A	4.013e^-4	0.959	INTRON CG34362
3L	12295136	3L_12295136_SNP [dm3] 3L_12302036_SNP [dm6]	G	T	4.014e^-4	0.959	DOWNSTREAM CR44551 & 1 other INTERGENIC
3L	12295137	3L_12295137_SNP [dm3] 3L_12302037_SNP [dm6]	G	A	4.014e^-4	0.959	DOWNSTREAM CR44551 & 1 other INTERGENIC
3L	477529	3L_477529_SNP [dm3] 3L_477529_SNP [dm6]	A	G	4.017e^-4	0.959	INTRON klar
3L	14330705	3L_14330705_SNP [dm3] 3L_14337605_SNP [dm6]	T	A	4.019e^-4	0.959	INTRON fz
3R	21177018	3R_21177018_SNP [dm3] 3R_25351296_SNP [dm6]	G	A	4.039e^-4	0.959	UTR_3_PRIME Fur1 DOWNSTREAM Fur1 INTRON Fur1	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3R	22269772	3R_22269772_SNP [dm3] 3R_26444050_SNP [dm6]	C	T	4.040e^-4	0.959	INTRON tx
2L	7011356	2L_7011356_SNP [dm3] 2L_7011356_SNP [dm6]	C	T	4.055e^-4	0.959	UPSTREAM uif & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
3R	20538590	3R_20538590_SNP [dm3] 3R_24712868_SNP [dm6]	C	T	4.058e^-4	0.959	UTR_5_PRIME CG13627
2L	2464293	2L_2464293_SNP [dm3] 2L_2464293_SNP [dm6]	C	T	4.061e^-4	0.959	INTERGENIC	enhancer FlyBase TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2L	5071214	2L_5071214_SNP [dm3] 2L_5071214_SNP [dm6]	T	G	4.071e^-4	0.959	UPSTREAM CR45305 DOWNSTREAM qtc & 1 other INTRON RpL37A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1
3R	1303752	3R_1303752_SNP [dm3] 3R_5478030_SNP [dm6]	T	G	4.073e^-4	0.959	DOWNSTREAM ksr INTRON Hcs	TF binding site mE1_TFBS_cad
3R	21183570	3R_21183570_SNP [dm3] 3R_25357848_SNP [dm6]	G	T	4.077e^-4	0.959	UPSTREAM CG11913 INTRON Fur1
2R	16837747	2R_16837747_SNP [dm3] 2R_20950242_SNP [dm6]	C	T	4.087e^-4	0.959	SYNONYMOUS_CODING CG33704	TF binding site BDTNP1_TFBS_da
2L	3276476	2L_3276476_SNP [dm3] 2L_3276476_SNP [dm6]	A	G	4.090e^-4	0.959	INTRON CG3332	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	12492867	X_12492867_SNP [dm3] X_12598834_SNP [dm6]	G	C	4.104e^-4	0.959	SYNONYMOUS_CODING Sec16	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
2L	313446	2L_313446_SNP [dm3] 2L_313446_SNP [dm6]	A	G	4.109e^-4	0.959	INTRON Plc21C
3R	9000921	3R_9000921_SNP [dm3] 3R_13175199_SNP [dm6]	G	T	4.113e^-4	0.959	INTERGENIC
3R	23654214	3R_23654214_SNP [dm3] 3R_27828492_SNP [dm6]	C	T	4.125e^-4	0.959	INTRON CG34353	TF binding site mE1_TFBS_chinmo
3L	3874135	3L_3874135_SNP [dm3] 3L_3874135_SNP [dm6]	A	G	4.125e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_cad
3L	11240915	3L_11240915_DEL [dm3] 3L_11247815_DEL [dm6]	AAACCATTAATTAACGTTCA...	A	4.130e^-4	0.959	UPSTREAM CR44717 & 1 other DOWNSTREAM CR44713 EXON CR44715	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_Ubx
2L	9777006	2L_9777006_SNP [dm3] 2L_9777006_SNP [dm6]	C	T	4.130e^-4	0.959	INTERGENIC	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
3L	7094529	3L_7094529_SNP [dm3] 3L_7101429_SNP [dm6]	C	T	4.136e^-4	0.959	INTRON form3
3R	3128905	3R_3128905_SNP [dm3] 3R_7303183_SNP [dm6]	T	A	4.146e^-4	0.959	UPSTREAM rn INTRON rn
2R	6528181	2R_6528181_SNP [dm3] 2R_10640676_SNP [dm6]	A	G	4.147e^-4	0.959	NON_SYNONYMOUS_CODING CG11883 UTR_3_PRIME CG11883
2L	488405	2L_488405_SNP [dm3] 2L_488405_SNP [dm6]	A	G	4.147e^-4	0.959	INTRON ush	TF binding site mE1_TFBS_Trl
X	678197	X_678197_SNP [dm3] X_784164_SNP [dm6]	G	A	4.151e^-4	0.959	UTR_3_PRIME fz3 UPSTREAM tw DOWNSTREAM fz3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2R	12753945	2R_12753945_SNP [dm3] 2R_16866440_SNP [dm6]	C	A	4.161e^-4	0.959	SYNONYMOUS_CODING Psi	TF binding site mE1_TFBS_chinmo
X	22077634	X_22077634_SNP [dm3] X_22675798_SNP [dm6]	G	A	4.163e^-4	0.959	INTRON CR44997
3R	21157548	3R_21157548_SNP [dm3] 3R_25331826_SNP [dm6]	A	T	4.205e^-4	0.959	SYNONYMOUS_CODING CG10669 UPSTREAM CHKov2	TF binding site mE1_TFBS_cad
2L	9078597	2L_9078597_DEL [dm3] 2L_9078597_DEL [dm6]	AA	A	4.206e^-4	0.959	DOWNSTREAM CG12439 INTERGENIC
2R	15593547	2R_15593547_SNP [dm3] 2R_19706042_SNP [dm6]	T	A	4.206e^-4	0.959	INTERGENIC	regulatory region REDfly_CRMs
3R	24787856	3R_24787856_SNP [dm3] 3R_28962134_SNP [dm6]	G	A	4.212e^-4	0.959	INTRON CG14521
3R	21183560	3R_21183560_SNP [dm3] 3R_25357838_SNP [dm6]	G	T	4.218e^-4	0.959	UPSTREAM CG11913 INTRON Fur1
3L	14668435	3L_14668435_SNP [dm3] 3L_14675335_SNP [dm6]	T	C	4.219e^-4	0.959	SYNONYMOUS_CODING CG4914 DOWNSTREAM tRNA:M3:70Fb INTRON ome	TF binding site mE1_TFBS_sens
2L	10345545	2L_10345545_SNP [dm3] 2L_10345545_SNP [dm6]	T	C	4.220e^-4	0.959	SYNONYMOUS_CODING CG5022
3R	19935647	3R_19935647_SNP [dm3] 3R_24109925_SNP [dm6]	A	T	4.222e^-4	0.959	UTR_3_PRIME CG18428 UPSTREAM 4EHP DOWNSTREAM CG13605	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	11240867	3L_11240867_DEL [dm3] 3L_11247767_DEL [dm6]	ACAGAGA	A	4.235e^-4	0.959	UPSTREAM CR44717 & 1 other DOWNSTREAM CR44713 EXON CR44715	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl mE1_TFBS_Ubx
3R	19878092	3R_19878092_SNP [dm3] 3R_24052370_SNP [dm6]	C	A	4.237e^-4	0.959	SYNONYMOUS_CODING CG5991	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	1168269	3L_1168269_SNP [dm3] 3L_1168269_SNP [dm6]	C	T	4.238e^-4	0.959	INTRON bab2	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	1697095	2L_1697095_SNP [dm3] 2L_1697095_SNP [dm6]	A	G	4.241e^-4	0.959	UTR_3_PRIME chinmo	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA
3R	20102142	3R_20102142_SNP [dm3] 3R_24276420_SNP [dm6]	A	G	4.247e^-4	0.959	UTR_5_PRIME Orct UPSTREAM Orct DOWNSTREAM Orct2	TF binding site mE1_TFBS_cad
2R	1929951	2R_1929951_SNP [dm3] 2R_6042446_SNP [dm6]	C	T	4.249e^-4	0.959	UPSTREAM Tbce INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_Ubx
3L	8542845	3L_8542845_DEL [dm3] 3L_8549745_DEL [dm6]	CG	C	4.250e^-4	0.959	INTRON rhea	TF binding site BDTNP1_TFBS_twi
2R	20298801	2R_20298801_SNP [dm3] 2R_24411278_SNP [dm6]	C	G	4.260e^-4	0.959	UPSTREAM SerT & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	764535	2R_764535_SNP [dm3] 2R_4877030_SNP [dm6]	G	T	4.261e^-4	0.959	INTERGENIC
3R	19656529	3R_19656529_SNP [dm3] 3R_23830807_SNP [dm6]	A	T	4.263e^-4	0.959	INTRON CG34355
3R	25786451	3R_25786451_SNP [dm3] 3R_29960729_SNP [dm6]	A	T	4.282e^-4	0.959	INTRON TkR99D
2R	7811769	2R_7811769_SNP [dm3] 2R_11924264_SNP [dm6]	G	T	4.296e^-4	0.959	INTERGENIC
3L	4003223	3L_4003223_SNP [dm3] 3L_4003223_SNP [dm6]	A	T	4.313e^-4	0.959	UPSTREAM CG14985 INTERGENIC
X	9554193	X_9554193_SNP [dm3] X_9660160_SNP [dm6]	G	A	4.323e^-4	0.959	SYNONYMOUS_CODING CG3106	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	18252651	3R_18252651_SNP [dm3] 3R_22426929_SNP [dm6]	G	C	4.324e^-4	0.959	SYNONYMOUS_CODING CG13847	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	11474450	2R_11474450_SNP [dm3] 2R_15586945_SNP [dm6]	T	A	4.327e^-4	0.959	INTERGENIC
2R	9841654	2R_9841654_SNP [dm3] 2R_13954149_SNP [dm6]	A	G	4.333e^-4	0.959	UPSTREAM mRpL53 & 2 others INTRON AGO1	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
X	11900211	X_11900211_SNP [dm3] X_12006178_SNP [dm6]	C	G	4.346e^-4	0.959	UPSTREAM CG1806 INTERGENIC
2R	15385822	2R_15385822_SNP [dm3] 2R_19498317_SNP [dm6]	G	T	4.361e^-4	0.959	SYNONYMOUS_CODING CG15120	TF binding site mE1_TFBS_cad
3L	8684175	3L_8684175_SNP [dm3] 3L_8691075_SNP [dm6]	T	C	4.365e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	5199787	X_5199787_SNP [dm3] X_5305754_SNP [dm6]	G	C	4.368e^-4	0.959	UPSTREAM CG3323 DOWNSTREAM CG17764 INTRON CG42749
X	18938636	X_18938636_SNP [dm3] X_19044603_SNP [dm6]	T	C	4.373e^-4	0.959	INTERGENIC
3L	19812743	3L_19812743_SNP [dm3] 3L_19819643_SNP [dm6]	C	T	4.375e^-4	0.959	SYNONYMOUS_CODING Deaf1	TF binding site mE1_TFBS_chinmo
3R	25764282	3R_25764282_SNP [dm3] 3R_29938560_SNP [dm6]	T	C	4.379e^-4	0.959	NON_SYNONYMOUS_CODING CG15523 DOWNSTREAM CG15523
X	3761007	X_3761007_SNP [dm3] X_3866974_SNP [dm6]	G	A	4.382e^-4	0.959	UPSTREAM yin INTRON yin	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
2L	3276485	2L_3276485_SNP [dm3] 2L_3276485_SNP [dm6]	A	G	4.391e^-4	0.959	INTRON CG3332	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	17180533	3R_17180533_SNP [dm3] 3R_21354811_SNP [dm6]	A	C	4.398e^-4	0.959	DOWNSTREAM mod_mdg4_ & 6 others INTRON mod_mdg4_
2L	15251718	2L_15251718_SNP [dm3] 2L_15251718_SNP [dm6]	G	A	4.399e^-4	0.959	SYNONYMOUS_CODING dao	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	16811858	X_16811858_SNP [dm3] X_16917825_SNP [dm6]	T	A	4.399e^-4	0.959	INTRON CG4928
2R	16825441	2R_16825441_SNP [dm3] 2R_20937936_SNP [dm6]	G	A	4.405e^-4	0.959	DOWNSTREAM Rx INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk mE1_TFBS_zfh1
3R	25762072	3R_25762072_SNP [dm3] 3R_29936350_SNP [dm6]	A	G	4.407e^-4	0.959	SYNONYMOUS_CODING CG15523 UPSTREAM eIF2B-alpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	24373629	3R_24373629_SNP [dm3] 3R_28547907_SNP [dm6]	A	T	4.412e^-4	0.959	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	11416243	3R_11416243_SNP [dm3] 3R_15590521_SNP [dm6]	G	A	4.421e^-4	0.959	INTERGENIC
2L	7341355	2L_7341355_DEL [dm3] 2L_7341355_DEL [dm6]	TT	T	4.421e^-4	0.959	INTRON Wnt6	TF binding site mE1_TFBS_sbb
2R	8615422	2R_8615422_SNP [dm3] 2R_12727917_SNP [dm6]	G	C	4.424e^-4	0.959	INTRON CG42663
2L	8052463	2L_8052463_SNP [dm3] 2L_8052463_SNP [dm6]	A	G	4.434e^-4	0.959	SYNONYMOUS_CODING CG7466
3R	21228184	3R_21228184_SNP [dm3] 3R_25402462_SNP [dm6]	T	A	4.437e^-4	0.959	INTRON Fur1
2L	12878073	2L_12878073_SNP [dm3] 2L_12878073_SNP [dm6]	C	T	4.438e^-4	0.959	INTERGENIC
3L	2181193	3L_2181193_DEL [dm3] 3L_2181193_DEL [dm6]	TTTT	T	4.443e^-4	0.959	INTERGENIC
3R	20538566	3R_20538566_SNP [dm3] 3R_24712844_SNP [dm6]	C	G	4.446e^-4	0.959	UTR_5_PRIME CG13627
X	18483308	X_18483308_SNP [dm3] X_18589275_SNP [dm6]	C	T	4.461e^-4	0.959	INTERGENIC
X	18213574	X_18213574_SNP [dm3] X_18319541_SNP [dm6]	A	G	4.472e^-4	0.959	INTRON CG6023
3R	9270443	3R_9270443_SNP [dm3] 3R_13444721_SNP [dm6]	C	A	4.475e^-4	0.959	UPSTREAM CR45679 INTERGENIC
2R	18954626	2R_18954626_SNP [dm3] 2R_23067103_SNP [dm6]	T	G	4.486e^-4	0.959	UTR_3_PRIME PPO3 UPSTREAM l_2_k09913	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3L	8795151	3L_8795151_SNP [dm3] 3L_8802051_SNP [dm6]	A	C	4.507e^-4	0.959	UPSTREAM CG34426 INTRON CG13311
2L	16039926	2L_16039926_SNP [dm3] 2L_16039926_SNP [dm6]	G	C	4.510e^-4	0.959	UTR_3_PRIME beat-Ic
2L	7506806	2L_7506806_SNP [dm3] 2L_7506806_SNP [dm6]	T	A	4.525e^-4	0.959	INTRON RapGAP1	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	10828879	3L_10828879_SNP [dm3] 3L_10835779_SNP [dm6]	A	T	4.530e^-4	0.959	INTERGENIC
X	10799593	X_10799593_SNP [dm3] X_10905560_SNP [dm6]	C	A	4.531e^-4	0.959	UPSTREAM CG43901 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_HSA
2L	9155657	2L_9155657_INS [dm3] 2L_9155657_INS [dm6]	T	TG	4.535e^-4	0.959	INTRON CG32982
3L	9189603	3L_9189603_SNP [dm3] 3L_9196503_SNP [dm6]	C	T	4.538e^-4	0.959	INTERGENIC
X	20799718	X_20799718_SNP [dm3] X_20928691_SNP [dm6]	G	A	4.543e^-4	0.959	INTERGENIC
3R	1838423	3R_1838423_SNP [dm3] 3R_6012701_SNP [dm6]	A	T	4.544e^-4	0.959	UPSTREAM CG10280 INTERGENIC
2L	8295518	2L_8295518_SNP [dm3] 2L_8295518_SNP [dm6]	C	T	4.550e^-4	0.959	INTRON Btk29A EXON CR43752
3R	12907930	3R_12907930_SNP [dm3] 3R_17082208_SNP [dm6]	G	T	4.554e^-4	0.959	UPSTREAM kuk INTRON kuk	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2R	19667012	2R_19667012_SNP [dm3] 2R_23779489_SNP [dm6]	T	G	4.554e^-4	0.959	INTRON CG9850
X	19643351	X_19643351_SNP [dm3] X_19749318_SNP [dm6]	T	A	4.554e^-4	0.959	DOWNSTREAM parvin INTRON Alr	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2R	19666938	2R_19666938_SNP [dm3] 2R_23779415_SNP [dm6]	G	T	4.557e^-4	0.959	INTRON CG9850
3R	3201867	3R_3201867_SNP [dm3] 3R_7376145_SNP [dm6]	A	G	4.563e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA
2L	3554669	2L_3554669_SNP [dm3] 2L_3554669_SNP [dm6]	C	T	4.577e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	14391884	3L_14391884_SNP [dm3] 3L_14398784_SNP [dm6]	C	A	4.592e^-4	0.959	INTERGENIC
2L	11051879	2L_11051879_SNP [dm3] 2L_11051879_SNP [dm6]	T	A	4.595e^-4	0.959	INTRON Samuel
3R	26388180	3R_26388180_SNP [dm3] 3R_30562458_SNP [dm6]	T	C	4.597e^-4	0.959	UPSTREAM tmod INTRON tmod	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad
2L	5957101	2L_5957101_SNP [dm3] 2L_5957101_SNP [dm6]	C	T	4.597e^-4	0.959	SYNONYMOUS_CODING Vm26Ab UPSTREAM CG13999 & 1 other DOWNSTREAM Vm26Ac	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	16364558	X_16364558_SNP [dm3] X_16470525_SNP [dm6]	A	T	4.608e^-4	0.959	INTRON para
3R	17177162	3R_17177162_SNP [dm3] 3R_21351440_SNP [dm6]	G	A	4.623e^-4	0.959	DOWNSTREAM mod_mdg4_ INTRON mod_mdg4_	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2L	16289819	2L_16289819_SNP [dm3] 2L_16289819_SNP [dm6]	C	T	4.627e^-4	0.959	SYNONYMOUS_CODING pkaap	TF binding site mE1_TFBS_sens
3R	22481327	3R_22481327_SNP [dm3] 3R_26655605_SNP [dm6]	G	A	4.633e^-4	0.959	UPSTREAM Tb INTRON beat-VII	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	2545639	3L_2545639_SNP [dm3] 3L_2545639_SNP [dm6]	C	T	4.641e^-4	0.959	INTRON Spn
3R	9272713	3R_9272713_SNP [dm3] 3R_13446991_SNP [dm6]	G	A	4.644e^-4	0.959	INTERGENIC
2L	16107416	2L_16107416_SNP [dm3] 2L_16107416_SNP [dm6]	C	A	4.649e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	8619981	2L_8619981_SNP [dm3] 2L_8619981_SNP [dm6]	T	A	4.660e^-4	0.959	UPSTREAM tRNA:CR31602 INTRON Sema-1a
3R	14388602	3R_14388602_SNP [dm3] 3R_18562880_SNP [dm6]	C	A	4.666e^-4	0.959	INTERGENIC
2L	1825536	2L_1825536_SNP [dm3] 2L_1825536_SNP [dm6]	T	G	4.666e^-4	0.959	NON_SYNONYMOUS_CODING CG31664
2L	10515689	2L_10515689_INS [dm3] 2L_10515689_INS [dm6]	T	TCCT	4.678e^-4	0.959	INTRON Fatp & 1 other
3L	18946770	3L_18946770_SNP [dm3] 3L_18953670_SNP [dm6]	G	A	4.680e^-4	0.959	START_GAINED CG6836 UTR_5_PRIME CG6836
3R	8138604	3R_8138604_SNP [dm3] 3R_12312882_SNP [dm6]	T	A	4.685e^-4	0.959	SYNONYMOUS_CODING CG4066	TF binding site BDTNP1_TFBS_slp1
2L	3263377	2L_3263377_SNP [dm3] 2L_3263377_SNP [dm6]	C	A	4.713e^-4	0.959	DOWNSTREAM CR45706 INTERGENIC
3L	19387652	3L_19387652_INS [dm3] 3L_19394552_INS [dm6]	T	TCT	4.733e^-4	0.959	INTRON CG32206
2L	492643	2L_492643_SNP [dm3] 2L_492643_SNP [dm6]	C	T	4.762e^-4	0.959	INTRON ush	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3L	7597737	3L_7597737_SNP [dm3] 3L_7604637_SNP [dm6]	C	T	4.772e^-4	0.959	UPSTREAM CG33275 INTRON CG33275
2R	14340378	2R_14340378_SNP [dm3] 2R_18452873_SNP [dm6]	T	C	4.774e^-4	0.959	SYNONYMOUS_CODING CG17669 DOWNSTREAM CG5190	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	3043111	2L_3043111_SNP [dm3] 2L_3043111_SNP [dm6]	A	T	4.785e^-4	0.959	SPLICE_SITE_REGION CG17261 UPSTREAM v_2_k05816 INTRON CG17261
3R	9003314	3R_9003314_SNP [dm3] 3R_13177592_SNP [dm6]	G	A	4.793e^-4	0.959	INTERGENIC
3L	17742838	3L_17742838_SNP [dm3] 3L_17749738_SNP [dm6]	C	T	4.799e^-4	0.959	SYNONYMOUS_CODING Adgf-B DOWNSTREAM Ccn	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	23162065	3R_23162065_SNP [dm3] 3R_27336343_SNP [dm6]	G	T	4.801e^-4	0.959	INTERGENIC
3R	25777459	3R_25777459_SNP [dm3] 3R_29951737_SNP [dm6]	C	T	4.805e^-4	0.959	INTRON TkR99D	TF binding site mE1_TFBS_chinmo
2L	5787358	2L_5787358_SNP [dm3] 2L_5787358_SNP [dm6]	C	T	4.806e^-4	0.959	INTRON CG9171
3R	25500447	3R_25500447_SNP [dm3] 3R_29674725_SNP [dm6]	C	A	4.820e^-4	0.959	SYNONYMOUS_CODING Bub3 UPSTREAM Cap-D2 DOWNSTREAM ppk19	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3R	26929385	3R_26929385_SNP [dm3] 3R_31103663_SNP [dm6]	A	T	4.821e^-4	0.959	INTERGENIC
2R	9203443	2R_9203443_SNP [dm3] 2R_13315938_SNP [dm6]	A	C	4.835e^-4	0.959	INTERGENIC
2L	6773292	2L_6773292_SNP [dm3] 2L_6773292_SNP [dm6]	G	T	4.849e^-4	0.959	UPSTREAM CG11321 & 1 other INTERGENIC
3R	21988167	3R_21988167_DEL [dm3] 3R_26162445_DEL [dm6]	AA	A	4.849e^-4	0.959	INTERGENIC
3R	22871553	3R_22871553_SNP [dm3] 3R_27045831_SNP [dm6]	C	A	4.864e^-4	0.959	INTRON RYa-R
2L	11155214	2L_11155214_SNP [dm3] 2L_11155214_SNP [dm6]	A	G	4.866e^-4	0.959	DOWNSTREAM Ca-beta INTRON CG6287
2R	14636317	2R_14636317_SNP [dm3] 2R_18748812_SNP [dm6]	T	C	4.868e^-4	0.959	SYNONYMOUS_CODING Hs3st-A
3R	24062669	3R_24062669_SNP [dm3] 3R_28236947_SNP [dm6]	G	A	4.877e^-4	0.959	DOWNSTREAM CR45041 INTRON CG34354
3L	7998951	3L_7998951_SNP [dm3] 3L_8005851_SNP [dm6]	T	C	4.882e^-4	0.959	INTRON nmo	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	9111570	X_9111570_SNP [dm3] X_9217537_SNP [dm6]	G	A	4.882e^-4	0.959	DOWNSTREAM CG15368 & 2 others INTERGENIC
3R	22122886	3R_22122886_SNP [dm3] 3R_26297164_SNP [dm6]	A	C	4.884e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	22768254	3R_22768254_SNP [dm3] 3R_26942532_SNP [dm6]	C	T	4.886e^-4	0.959	SYNONYMOUS_CODING sda	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	13432378	X_13432378_SNP [dm3] X_13538345_SNP [dm6]	A	T	4.890e^-4	0.959	INTERGENIC
2L	491033	2L_491033_SNP [dm3] 2L_491033_SNP [dm6]	C	T	4.900e^-4	0.959	UTR_5_PRIME ush INTRON ush	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Trl
X	650512	X_650512_SNP [dm3] X_756479_SNP [dm6]	C	G	4.906e^-4	0.959	SYNONYMOUS_CODING CG5254 INTRON CG5254
3R	21183564	3R_21183564_DEL [dm3] 3R_25357842_DEL [dm6]	TGGAA	T	4.912e^-4	0.959	UPSTREAM CG11913 INTRON Fur1
3L	8554701	3L_8554701_SNP [dm3] 3L_8561601_SNP [dm6]	G	C	4.925e^-4	0.959	NON_SYNONYMOUS_CODING rhea
3L	8554714	3L_8554714_SNP [dm3] 3L_8561614_SNP [dm6]	C	G	4.925e^-4	0.959	NON_SYNONYMOUS_CODING rhea
3R	22122876	3R_22122876_SNP [dm3] 3R_26297154_SNP [dm6]	G	T	4.928e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	22747935	3L_22747935_SNP [dm3] 3L_22754835_SNP [dm6]	A	G	4.937e^-4	0.959	INTRON SPoCk	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	8837163	X_8837163_SNP [dm3] X_8943130_SNP [dm6]	T	C	4.938e^-4	0.959	INTRON rdgA
3L	13593706	3L_13593706_SNP [dm3] 3L_13600606_SNP [dm6]	G	A	4.942e^-4	0.959	DOWNSTREAM CR45120 INTRON bru-3
X	16040238	X_16040238_DEL [dm3] X_16146205_DEL [dm6]	GG	G	4.945e^-4	0.959	INTRON disco-r	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	13962320	2R_13962320_SNP [dm3] 2R_18074815_SNP [dm6]	A	T	4.948e^-4	0.959	DOWNSTREAM CR45022 INTRON CG34386
2R	13962321	2R_13962321_SNP [dm3] 2R_18074816_SNP [dm6]	A	G	4.948e^-4	0.959	DOWNSTREAM CR45022 INTRON CG34386
2L	8710662	2L_8710662_SNP [dm3] 2L_8710662_SNP [dm6]	G	A	4.973e^-4	0.959	INTRON raw
3L	2386870	3L_2386870_SNP [dm3] 3L_2386870_SNP [dm6]	G	A	4.974e^-4	0.959	INTRON CG45186	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	25888951	3R_25888951_SNP [dm3] 3R_30063229_SNP [dm6]	C	A	4.978e^-4	0.959	NON_SYNONYMOUS_CODING sima INTRON sima	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo
3R	15155856	3R_15155856_SNP [dm3] 3R_19330134_SNP [dm6]	G	C	4.982e^-4	0.959	INTRON CR43258 EXON CR43258	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	19826024	3R_19826024_SNP [dm3] 3R_24000302_SNP [dm6]	G	A	4.992e^-4	0.959	SYNONYMOUS_CODING KrT95D	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	25753091	3R_25753091_SNP [dm3] 3R_29927369_SNP [dm6]	C	T	5.001e^-4	0.959	UTR_5_PRIME CG15522
2L	8082000	2L_8082000_DEL [dm3] 2L_8082000_DEL [dm6]	CCA	G	5.006e^-4	0.959	UPSTREAM CR45257 INTRON Mcr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi
3R	23520941	3R_23520941_SNP [dm3] 3R_27695219_SNP [dm6]	T	A	5.007e^-4	0.959	UPSTREAM CG43320 DOWNSTREAM CG43319 & 1 other INTERGENIC
3R	20534128	3R_20534128_SNP [dm3] 3R_24708406_SNP [dm6]	C	T	5.007e^-4	0.959	UTR_3_PRIME slo DOWNSTREAM slo
3R	18912041	3R_18912041_SNP [dm3] 3R_23086319_SNP [dm6]	T	G	5.017e^-4	0.959	INTRON CG13830	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	11851773	3L_11851773_SNP [dm3] 3L_11858673_SNP [dm6]	G	A	5.024e^-4	0.959	INTRON CG44837
2L	492605	2L_492605_SNP [dm3] 2L_492605_SNP [dm6]	C	A	5.026e^-4	0.959	INTRON ush	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2L	5959605	2L_5959605_SNP [dm3] 2L_5959605_SNP [dm6]	A	G	5.028e^-4	0.959	UTR_3_PRIME Vm26Aa UPSTREAM Vm26Ac DOWNSTREAM Vm26Aa
2L	3960936	2L_3960936_SNP [dm3] 2L_3960936_SNP [dm6]	G	T	5.028e^-4	0.959	INTRON fred
2L	15252123	2L_15252123_SNP [dm3] 2L_15252123_SNP [dm6]	G	A	5.030e^-4	0.959	SYNONYMOUS_CODING dao	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	18699051	2R_18699051_SNP [dm3] 2R_22811546_SNP [dm6]	G	T	5.036e^-4	0.959	INTRON stl
2L	4403204	2L_4403204_SNP [dm3] 2L_4403204_SNP [dm6]	C	T	5.039e^-4	0.959	UPSTREAM Dim1 DOWNSTREAM CG15431 & 1 other INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA
2L	17999731	2L_17999731_SNP [dm3] 2L_17999731_SNP [dm6]	T	G	5.055e^-4	0.959	INTERGENIC
3L	9010453	3L_9010453_SNP [dm3] 3L_9017353_SNP [dm6]	T	C	5.062e^-4	0.959	INTRON Doc2	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens
2R	18753912	2R_18753912_SNP [dm3] 2R_22866389_SNP [dm6]	A	G	5.070e^-4	0.959	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	19389386	X_19389386_SNP [dm3] X_19495353_SNP [dm6]	G	A	5.071e^-4	0.959	UPSTREAM CG12204 & 3 others EXON CR44340	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn
2L	7507333	2L_7507333_SNP [dm3] 2L_7507333_SNP [dm6]	T	C	5.072e^-4	0.959	INTRON RapGAP1	TF binding site BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad
3L	17977079	3L_17977079_INS [dm3] 3L_17983979_INS [dm6]	A	AGCGTT	5.078e^-4	0.959	INTRON Eip75B
3L	17238432	3L_17238432_SNP [dm3] 3L_17245332_SNP [dm6]	A	C	5.091e^-4	0.959	UPSTREAM CR43870 DOWNSTREAM CG7707 INTERGENIC	transposable element FlyBase
3R	1867787	3R_1867787_SNP [dm3] 3R_6042065_SNP [dm6]	A	T	5.091e^-4	0.959	INTERGENIC
2L	11943321	2L_11943321_SNP [dm3] 2L_11943321_SNP [dm6]	C	T	5.093e^-4	0.959	UPSTREAM Cry INTERGENIC	regulatory region REDfly_CRMs
3R	26389278	3R_26389278_SNP [dm3] 3R_30563556_SNP [dm6]	C	T	5.094e^-4	0.959	INTRON tmod	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	17998477	2L_17998477_SNP [dm3] 2L_17998477_SNP [dm6]	C	T	5.097e^-4	0.959	INTERGENIC
3L	14330337	3L_14330337_SNP [dm3] 3L_14337237_SNP [dm6]	C	T	5.098e^-4	0.959	INTRON fz
3L	13669306	3L_13669306_INS [dm3] 3L_13676206_INS [dm6]	G	GG	5.102e^-4	0.959	INTRON bru-3	TF binding site mE1_TFBS_chinmo
2L	14578848	2L_14578848_SNP [dm3] 2L_14578848_SNP [dm6]	A	G	5.103e^-4	0.959	INTERGENIC	TF binding site BDTNP1_TFBS_da
2L	11180816	2L_11180816_SNP [dm3] 2L_11180816_SNP [dm6]	C	G	5.104e^-4	0.959	DOWNSTREAM CG4788 INTRON Ca-beta	TF binding site mE1_TFBS_cad
2R	10952615	2R_10952615_DEL [dm3] 2R_15065110_DEL [dm6]	TGATGG	T	5.108e^-4	0.959	INTERGENIC
2L	7394198	2L_7394198_SNP [dm3] 2L_7394198_SNP [dm6]	C	T	5.121e^-4	0.959	INTRON CG5160
2R	951354	2R_951354_SNP [dm3] 2R_5063849_SNP [dm6]	A	C	5.139e^-4	0.959	INTERGENIC
3R	17611858	3R_17611858_SNP [dm3] 3R_21786136_SNP [dm6]	T	G	5.162e^-4	0.959	UTR_3_PRIME CASK EXON CRG
3R	2457528	3R_2457528_SNP [dm3] 3R_6631806_SNP [dm6]	T	C	5.164e^-4	0.959	DOWNSTREAM sunz INTERGENIC
3R	25988842	3R_25988842_SNP [dm3] 3R_30163120_SNP [dm6]	T	A	5.168e^-4	0.959	INTERGENIC
3L	12344373	3L_12344373_SNP [dm3] 3L_12351273_SNP [dm6]	A	T	5.173e^-4	0.959	UTR_5_PRIME CrzR
3R	20819810	3R_20819810_SNP [dm3] 3R_24994088_SNP [dm6]	T	A	5.179e^-4	0.959	INTRON tnc
3R	16726835	3R_16726835_SNP [dm3] 3R_20901113_SNP [dm6]	T	G	5.181e^-4	0.959	UPSTREAM CG5621 INTERGENIC
3L	18092645	3L_18092645_SNP [dm3] 3L_18099545_SNP [dm6]	A	T	5.187e^-4	0.959	INTRON CG13698
2L	9257405	2L_9257405_SNP [dm3] 2L_9257405_SNP [dm6]	T	G	5.194e^-4	0.959	INTRON Ggamma30A	TF binding site BDTNP1_TFBS_z
2L	11148307	2L_11148307_INS [dm3] 2L_11148307_INS [dm6]	T	TA	5.196e^-4	0.959	INTRON Gyc32E
2L	6840849	2L_6840849_SNP [dm3] 2L_6840849_SNP [dm6]	A	G	5.203e^-4	0.959	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi
3L	8807471	3L_8807471_SNP [dm3] 3L_8814371_SNP [dm6]	G	C	5.214e^-4	0.959	INTERGENIC
X	13676743	X_13676743_SNP [dm3] X_13782710_SNP [dm6]	A	T	5.219e^-4	0.959	NON_SYNONYMOUS_CODING CG11103 UPSTREAM CtsB1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens
3L	14042177	3L_14042177_SNP [dm3] 3L_14049077_SNP [dm6]	T	G	5.224e^-4	0.959	SPLICE_SITE_REGION blue INTRON blue	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	22122934	3R_22122934_SNP [dm3] 3R_26297212_SNP [dm6]	G	A	5.228e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
X	8837129	X_8837129_SNP [dm3] X_8943096_SNP [dm6]	C	A	5.228e^-4	0.959	INTRON rdgA
3R	11128994	3R_11128994_SNP [dm3] 3R_15303272_SNP [dm6]	A	T	5.236e^-4	0.959	INTRON Tm1
2L	7247503	2L_7247503_SNP [dm3] 2L_7247503_SNP [dm6]	A	G	5.237e^-4	0.959	INTRON Ndae1	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10915977	X_10915977_SNP [dm3] X_11021944_SNP [dm6]	T	C	5.238e^-4	0.959	INTRON CG42339
3R	26389829	3R_26389829_SNP [dm3] 3R_30564107_SNP [dm6]	A	C	5.243e^-4	0.959	INTRON tmod	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_Trl
X	19435648	X_19435648_SNP [dm3] X_19541615_SNP [dm6]	C	A	5.248e^-4	0.959	INTRON CG32532
X	19389110	X_19389110_SNP [dm3] X_19495077_SNP [dm6]	G	A	5.249e^-4	0.959	UPSTREAM CG12204 & 3 others DOWNSTREAM CR44340 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_kn
3R	1714648	3R_1714648_SNP [dm3] 3R_5888926_SNP [dm6]	C	T	5.253e^-4	0.959	INTRON CG34113
2L	8507624	2L_8507624_SNP [dm3] 2L_8507624_SNP [dm6]	A	G	5.253e^-4	0.959	UPSTREAM Dh31 INTERGENIC
3R	1293468	3R_1293468_SNP [dm3] 3R_5467746_SNP [dm6]	T	G	5.255e^-4	0.959	UPSTREAM CG12162 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
2L	16188720	2L_16188720_SNP [dm3] 2L_16188720_SNP [dm6]	C	T	5.264e^-4	0.959	INTRON Ca-alpha1D
3L	16969200	3L_16969200_SNP [dm3] 3L_16976100_SNP [dm6]	T	C	5.265e^-4	0.959	UPSTREAM Exn INTRON Exn
X	17163476	X_17163476_SNP [dm3] X_17269443_SNP [dm6]	C	A	5.266e^-4	0.959	INTRON f
2R	2703095	2R_2703095_SNP [dm3] 2R_6815590_SNP [dm6]	C	T	5.268e^-4	0.959	NON_SYNONYMOUS_CODING koi DOWNSTREAM koi	TF binding site mE1_TFBS_sens
3L	9219735	3L_9219735_SNP [dm3] 3L_9226635_SNP [dm6]	G	A	5.269e^-4	0.959	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	16781021	3R_16781021_SNP [dm3] 3R_20955299_SNP [dm6]	C	T	5.271e^-4	0.959	INTRON Atpalpha
2L	6898491	2L_6898491_SNP [dm3] 2L_6898491_SNP [dm6]	A	C	5.284e^-4	0.959	INTRON Nlg2
2R	790881	2R_790881_SNP [dm3] 2R_4903376_SNP [dm6]	G	A	5.289e^-4	0.959	INTRON CG44102	transposable element FlyBase
2L	9242325	2L_9242325_SNP [dm3] 2L_9242325_SNP [dm6]	G	A	5.295e^-4	0.959	SYNONYMOUS_CODING tai	TF binding site mE1_TFBS_chinmo
X	16051323	X_16051323_SNP [dm3] X_16157290_SNP [dm6]	T	C	5.303e^-4	0.959	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2R	12753640	2R_12753640_INS [dm3] 2R_16866135_INS [dm6]	A	AA	5.310e^-4	0.959	INTRON Psi	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	11416234	3R_11416234_SNP [dm3] 3R_15590512_SNP [dm6]	C	T	5.335e^-4	0.959	INTERGENIC
X	9853161	X_9853161_SNP [dm3] X_9959128_SNP [dm6]	A	C	5.342e^-4	0.959	INTERGENIC
3R	6662564	3R_6662564_SNP [dm3] 3R_10836842_SNP [dm6]	A	G	5.344e^-4	0.959	INTRON Cad86C
3L	19384276	3L_19384276_DEL [dm3] 3L_19391176_DEL [dm6]	CC	C	5.346e^-4	0.959	INTRON CG32206	TF binding site BDTNP1_TFBS_Med mE1_TFBS_inv
3R	18438714	3R_18438714_SNP [dm3] 3R_22612992_SNP [dm6]	A	T	5.352e^-4	0.959	NON_SYNONYMOUS_CODING CG31156 UPSTREAM EF-G2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	1239752	3L_1239752_SNP [dm3] 3L_1239752_SNP [dm6]	T	C	5.360e^-4	0.959	SPLICE_SITE_REGION CG9194 SYNONYMOUS_CODING CG9194	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
2L	6298742	2L_6298742_SNP [dm3] 2L_6298742_SNP [dm6]	C	G	5.363e^-4	0.959	INTRON Ddr
2R	11730648	2R_11730648_SNP [dm3] 2R_15843143_SNP [dm6]	A	T	5.376e^-4	0.959	UTR_3_PRIME CG8249 DOWNSTREAM CG8249 INTRON tun	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl
3R	24815479	3R_24815479_SNP [dm3] 3R_28989757_SNP [dm6]	C	A	5.407e^-4	0.959	INTERGENIC
3R	25780209	3R_25780209_SNP [dm3] 3R_29954487_SNP [dm6]	C	A	5.408e^-4	0.959	INTRON TkR99D
3R	2396070	3R_2396070_SNP [dm3] 3R_6570348_SNP [dm6]	T	C	5.412e^-4	0.959	INTRON dpr11
3R	25758664	3R_25758664_SNP [dm3] 3R_29932942_SNP [dm6]	A	T	5.412e^-4	0.959	SYNONYMOUS_CODING Cog7 UPSTREAM CG42557 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA

Missing results

By genomic position
Variant impact
Gene name

Cuticul_2_Me_C26 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results