DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=5.404e^-7)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test
No significant result.

Kruskal-Wallis test
No significant result.

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

2074 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	16233307	3L_16233307_SNP [dm3] 3L_16240207_SNP [dm6]	G	A	1.595e^-6	0.789	DOWNSTREAM l_3_72Dr INTERGENIC
2R	12011205	2R_12011205_SNP [dm3] 2R_16123700_SNP [dm6]	A	G	3.733e^-6	0.789	DOWNSTREAM Jhe INTRON CG30095	TF binding site BDTNP1_TFBS_twi
3L	16233309	3L_16233309_SNP [dm3] 3L_16240209_SNP [dm6]	T	C	3.878e^-6	0.789	DOWNSTREAM l_3_72Dr INTERGENIC
3L	22644157	3L_22644157_SNP [dm3] 3L_22651057_SNP [dm6]	G	T	3.882e^-6	0.789	DOWNSTREAM CG33772 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_inv
3L	15190883	3L_15190883_SNP [dm3] 3L_15197783_SNP [dm6]	C	T	5.225e^-6	0.789	INTERGENIC
2R	13790467	2R_13790467_SNP [dm3] 2R_17902962_SNP [dm6]	G	T	5.427e^-6	0.789	INTRON Elk
3L	16233286	3L_16233286_SNP [dm3] 3L_16240186_SNP [dm6]	G	C	5.434e^-6	0.789	DOWNSTREAM l_3_72Dr INTERGENIC
2L	10746323	2L_10746323_SNP [dm3] 2L_10746323_SNP [dm6]	G	A	5.601e^-6	0.789	INTRON CG17124
2L	11482297	2L_11482297_SNP [dm3] 2L_11482297_SNP [dm6]	G	C	6.054e^-6	0.789	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	12356400	3R_12356400_SNP [dm3] 3R_16530678_SNP [dm6]	T	C	6.878e^-6	0.789	INTRON CG42342	TF binding site BDTNP1_TFBS_dl
X	14922949	X_14922949_SNP [dm3] X_15028916_SNP [dm6]	G	A	7.722e^-6	0.789	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	16519447	2L_16519447_SNP [dm3] 2L_16519447_SNP [dm6]	G	T	8.107e^-6	0.789	INTRON CG5953
2R	9779415	2R_9779415_SNP [dm3] 2R_13891910_SNP [dm6]	C	T	9.031e^-6	0.789	SYNONYMOUS_CODING shot INTRON shot
3L	5233848	3L_5233848_DEL [dm3] 3L_5240748_DEL [dm6]	CC	C	9.107e^-6	0.789	INTRON shep
2L	6771645	2L_6771645_SNP [dm3] 2L_6771645_SNP [dm6]	T	A	9.314e^-6	0.789	UPSTREAM CG11321 INTRON CG11321
3L	5342506	3L_5342506_SNP [dm3] 3L_5349406_SNP [dm6]	T	G	9.515e^-6	0.789	INTRON lama
2R	8738056	2R_8738056_SNP [dm3] 2R_12850551_SNP [dm6]	G	A	9.690e^-6	0.789	INTRON CG17574
2L	17794999	2L_17794999_SNP [dm3] 2L_17794999_SNP [dm6]	T	C	1.060e^-5	0.789	INTRON CadN2
2R	15265853	2R_15265853_SNP [dm3] 2R_19378348_SNP [dm6]	C	T	1.065e^-5	0.789	SYNONYMOUS_CODING CG10062	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	25963705	3R_25963705_SNP [dm3] 3R_30137983_SNP [dm6]	G	A	1.127e^-5	0.789	INTRON AdoR	TF binding site mE1_TFBS_cad
2L	11189341	2L_11189341_SNP [dm3] 2L_11189341_SNP [dm6]	G	T	1.187e^-5	0.789	INTRON Ca-beta	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	14922942	X_14922942_SNP [dm3] X_15028909_SNP [dm6]	T	A	1.222e^-5	0.789	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	11493145	2L_11493145_SNP [dm3] 2L_11493145_SNP [dm6]	A	G	1.227e^-5	0.789	INTERGENIC
3L	4979843	3L_4979843_SNP [dm3] 3L_4979843_SNP [dm6]	G	A	1.261e^-5	0.789	UPSTREAM CR45685 DOWNSTREAM CG17030 INTRON Con	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	20807069	2L_20807069_DEL [dm3] 2L_20807069_DEL [dm6]	GGCGTGA	T	1.280e^-5	0.789	INTRON CG9328
3L	4979731	3L_4979731_SNP [dm3] 3L_4979731_SNP [dm6]	T	C	1.313e^-5	0.789	DOWNSTREAM CG17030 INTRON Con	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	11481827	2L_11481827_SNP [dm3] 2L_11481827_SNP [dm6]	T	A	1.374e^-5	0.789	INTERGENIC
2L	6771685	2L_6771685_SNP [dm3] 2L_6771685_SNP [dm6]	C	T	1.414e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
2R	15055689	2R_15055689_SNP [dm3] 2R_19168184_SNP [dm6]	C	T	1.507e^-5	0.789	INTRON CG10737
X	14922882	X_14922882_SNP [dm3] X_15028849_SNP [dm6]	G	C	1.544e^-5	0.789	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	7476281	2R_7476281_SNP [dm3] 2R_11588776_SNP [dm6]	C	T	1.692e^-5	0.789	SYNONYMOUS_CODING tou UPSTREAM snoRNA:Psi28S-1936	TF binding site mE1_TFBS_cad
3L	11934310	3L_11934310_SNP [dm3] 3L_11941210_SNP [dm6]	A	C	1.848e^-5	0.789	UPSTREAM Rpt4R INTERGENIC
2R	9315360	2R_9315360_SNP [dm3] 2R_13427855_SNP [dm6]	C	T	1.864e^-5	0.789	INTRON CG42321	TF binding site BDTNP1_TFBS_twi mE1_TFBS_inv
3L	12555431	3L_12555431_SNP [dm3] 3L_12562331_SNP [dm6]	C	T	1.872e^-5	0.789	INTRON sowah
2R	7476957	2R_7476957_SNP [dm3] 2R_11589452_SNP [dm6]	C	A	1.880e^-5	0.789	NON_SYNONYMOUS_CODING tou	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	1283044	2L_1283044_SNP [dm3] 2L_1283044_SNP [dm6]	C	T	1.914e^-5	0.789	INTRON robo3
2L	562017	2L_562017_SNP [dm3] 2L_562017_SNP [dm6]	G	A	1.972e^-5	0.789	NON_SYNONYMOUS_CODING CG11835	TF binding site mE1_TFBS_chinmo
2L	6771716	2L_6771716_SNP [dm3] 2L_6771716_SNP [dm6]	G	C	2.006e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
2L	11493019	2L_11493019_SNP [dm3] 2L_11493019_SNP [dm6]	G	T	2.064e^-5	0.789	INTERGENIC
3L	1373565	3L_1373565_SNP [dm3] 3L_1373565_SNP [dm6]	T	C	2.104e^-5	0.789	INTRON Ptp61F & 1 other
2L	11571145	2L_11571145_SNP [dm3] 2L_11571145_SNP [dm6]	T	C	2.111e^-5	0.789	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	27100304	3R_27100304_SNP [dm3] 3R_31274582_SNP [dm6]	G	A	2.121e^-5	0.789	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	4491725	2R_4491725_SNP [dm3] 2R_8604220_SNP [dm6]	C	T	2.152e^-5	0.789	INTRON rgr	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	10616019	2L_10616019_SNP [dm3] 2L_10616019_SNP [dm6]	T	G	2.185e^-5	0.789	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2R	9315413	2R_9315413_SNP [dm3] 2R_13427908_SNP [dm6]	C	A	2.190e^-5	0.789	INTRON CG42321	TF binding site BDTNP1_TFBS_twi mE1_TFBS_inv
3R	14903426	3R_14903426_SNP [dm3] 3R_19077704_SNP [dm6]	A	T	2.284e^-5	0.789	INTRON cdi
2R	11780415	2R_11780415_SNP [dm3] 2R_15892910_SNP [dm6]	T	C	2.300e^-5	0.789	INTRON sli	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	6771681	2L_6771681_SNP [dm3] 2L_6771681_SNP [dm6]	T	C	2.440e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
3L	22644488	3L_22644488_SNP [dm3] 3L_22651388_SNP [dm6]	C	T	2.467e^-5	0.789	DOWNSTREAM CG33772 INTERGENIC	TF binding site mE1_TFBS_inv
2R	7065103	2R_7065103_SNP [dm3] 2R_11177598_SNP [dm6]	G	T	2.469e^-5	0.789	INTRON shn
X	12668803	X_12668803_SNP [dm3] X_12774770_SNP [dm6]	T	C	2.492e^-5	0.789	UTR_3_PRIME CG32647 DOWNSTREAM CG32647
3L	1391263	3L_1391263_SNP [dm3] 3L_1391263_SNP [dm6]	C	A	2.528e^-5	0.789	INTRON Ptp61F	TF binding site BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	5099303	2R_5099303_SNP [dm3] 2R_9211798_SNP [dm6]	A	G	2.533e^-5	0.789	INTERGENIC
2L	18771226	2L_18771226_SNP [dm3] 2L_18771226_SNP [dm6]	T	G	2.541e^-5	0.789	INTRON ham
X	14922938	X_14922938_SNP [dm3] X_15028905_SNP [dm6]	T	A	2.551e^-5	0.789	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	6771897	2L_6771897_SNP [dm3] 2L_6771897_SNP [dm6]	G	A	2.556e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
X	6788786	X_6788786_SNP [dm3] X_6894753_SNP [dm6]	A	C	2.575e^-5	0.789	INTERGENIC
2R	17657062	2R_17657062_SNP [dm3] 2R_21769557_SNP [dm6]	G	T	2.576e^-5	0.789	INTRON CG30395	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	11938119	3L_11938119_SNP [dm3] 3L_11945019_SNP [dm6]	A	C	2.710e^-5	0.789	UPSTREAM CG5883 INTERGENIC
2R	4466479	2R_4466479_SNP [dm3] 2R_8578974_SNP [dm6]	G	A	2.745e^-5	0.789	UPSTREAM CG42326 INTRON CG42326
2L	6771815	2L_6771815_SNP [dm3] 2L_6771815_SNP [dm6]	A	C	2.768e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
3L	1369565	3L_1369565_SNP [dm3] 3L_1369565_SNP [dm6]	A	G	2.776e^-5	0.789	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	15104877	2L_15104877_SNP [dm3] 2L_15104877_SNP [dm6]	C	T	2.836e^-5	0.789	INTERGENIC
2L	11483025	2L_11483025_SNP [dm3] 2L_11483025_SNP [dm6]	A	T	2.873e^-5	0.789	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	15888030	3L_15888030_SNP [dm3] 3L_15894930_SNP [dm6]	C	A	2.876e^-5	0.789	INTRON pHCl
X	6408307	X_6408307_SNP [dm3] X_6514274_SNP [dm6]	C	T	2.921e^-5	0.789	INTRON CG42340
3L	17035721	3L_17035721_SNP [dm3] 3L_17042621_SNP [dm6]	C	A	3.016e^-5	0.789	UPSTREAM Papst2 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
3R	8422316	3R_8422316_SNP [dm3] 3R_12596594_SNP [dm6]	C	A	3.027e^-5	0.789	UPSTREAM Octbeta2R INTERGENIC
2L	7452801	2L_7452801_SNP [dm3] 2L_7452801_SNP [dm6]	A	C	3.064e^-5	0.789	SYNONYMOUS_CODING Gr28a	TF binding site mE1_TFBS_HSA
3L	16233172	3L_16233172_SNP [dm3] 3L_16240072_SNP [dm6]	G	A	3.125e^-5	0.789	DOWNSTREAM l_3_72Dr INTERGENIC
3L	460519	3L_460519_DEL [dm3] 3L_460519_DEL [dm6]	AGATCAGGTCGGGGA...	A	3.171e^-5	0.789	INTRON klar
2L	8936807	2L_8936807_SNP [dm3] 2L_8936807_SNP [dm6]	T	C	3.190e^-5	0.789	UPSTREAM Tsp29Fb DOWNSTREAM Tsp29Fa INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	8501381	X_8501381_SNP [dm3] X_8607348_SNP [dm6]	G	T	3.197e^-5	0.789	INTERGENIC
3L	17035763	3L_17035763_SNP [dm3] 3L_17042663_SNP [dm6]	C	T	3.205e^-5	0.789	UPSTREAM Papst2 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
3L	17345690	3L_17345690_SNP [dm3] 3L_17352590_SNP [dm6]	C	T	3.222e^-5	0.789	UPSTREAM CG7692 INTRON CG7692	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	11435981	2L_11435981_SNP [dm3] 2L_11435981_SNP [dm6]	T	G	3.381e^-5	0.789	INTRON salm	TF binding site BDTNP1_TFBS_twi
2L	11481704	2L_11481704_SNP [dm3] 2L_11481704_SNP [dm6]	A	G	3.398e^-5	0.789	INTERGENIC
3R	5042724	3R_5042724_SNP [dm3] 3R_9217002_SNP [dm6]	A	G	3.485e^-5	0.789	INTRON pum	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	1007912	3L_1007912_SNP [dm3] 3L_1007912_SNP [dm6]	G	A	3.566e^-5	0.789	UPSTREAM trio INTRON trio	TF binding site mE1_TFBS_inv
3L	4979724	3L_4979724_SNP [dm3] 3L_4979724_SNP [dm6]	A	C	3.628e^-5	0.789	DOWNSTREAM CG17030 INTRON Con	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	19005633	2R_19005633_SNP [dm3] 2R_23118110_SNP [dm6]	G	A	3.692e^-5	0.789	INTERGENIC
2L	11481689	2L_11481689_SNP [dm3] 2L_11481689_SNP [dm6]	A	G	3.754e^-5	0.789	INTERGENIC
2R	17172105	2R_17172105_SNP [dm3] 2R_21284600_SNP [dm6]	C	T	3.833e^-5	0.789	SPLICE_SITE_REGION MFS16 DOWNSTREAM CG10505 INTRON MFS16
2L	11481708	2L_11481708_SNP [dm3] 2L_11481708_SNP [dm6]	G	A	3.962e^-5	0.789	INTERGENIC
2L	9489738	2L_9489738_INS [dm3] 2L_9489738_INS [dm6]	C	AT	3.965e^-5	0.789	INTERGENIC
2L	11482617	2L_11482617_SNP [dm3] 2L_11482617_SNP [dm6]	G	A	4.021e^-5	0.789	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	6771880	2L_6771880_SNP [dm3] 2L_6771880_SNP [dm6]	A	C	4.054e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
3R	12356444	3R_12356444_SNP [dm3] 3R_16530722_SNP [dm6]	T	C	4.062e^-5	0.789	INTRON CG42342	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
2L	11483003	2L_11483003_SNP [dm3] 2L_11483003_SNP [dm6]	A	G	4.084e^-5	0.789	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	982483	3L_982483_SNP [dm3] 3L_982483_SNP [dm6]	C	T	4.159e^-5	0.789	UTR_3_PRIME Glut1 INTRON Glut1
3L	22643737	3L_22643737_SNP [dm3] 3L_22650637_SNP [dm6]	A	G	4.162e^-5	0.789	DOWNSTREAM CG33771 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4979740	3L_4979740_SNP [dm3] 3L_4979740_SNP [dm6]	C	A	4.170e^-5	0.789	DOWNSTREAM CG17030 INTRON Con	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	13703238	2L_13703238_SNP [dm3] 2L_13703238_SNP [dm6]	C	T	4.203e^-5	0.789	INTRON CG31814
2L	11493044	2L_11493044_DEL [dm3] 2L_11493044_DEL [dm6]	TATATTATATATTTTAAGTG...	T	4.246e^-5	0.789	INTERGENIC
2L	10616053	2L_10616053_SNP [dm3] 2L_10616053_SNP [dm6]	A	T	4.252e^-5	0.789	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2L	6771886	2L_6771886_SNP [dm3] 2L_6771886_SNP [dm6]	C	G	4.272e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
3L	22641129	3L_22641129_SNP [dm3] 3L_22648029_SNP [dm6]	T	C	4.275e^-5	0.789	UPSTREAM CG33770 DOWNSTREAM CG33768 INTRON CG33769	insulator Insulator_Class_I.mE01 TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	22650946	3L_22650946_SNP [dm3] 3L_22657846_SNP [dm6]	G	T	4.275e^-5	0.789	INTERGENIC	TF binding site mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA
3R	22824760	3R_22824760_SNP [dm3] 3R_26999038_SNP [dm6]	G	T	4.275e^-5	0.789	UPSTREAM CG31077 INTRON RYa-R
3L	22641033	3L_22641033_SNP [dm3] 3L_22647933_SNP [dm6]	G	C	4.371e^-5	0.789	NON_SYNONYMOUS_CODING CG33769 UPSTREAM CG33770 DOWNSTREAM CG33767 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	9489771	2L_9489771_SNP [dm3] 2L_9489771_SNP [dm6]	C	T	4.405e^-5	0.789	INTERGENIC
3R	2958489	3R_2958489_SNP [dm3] 3R_7132767_SNP [dm6]	C	T	4.437e^-5	0.789	DOWNSTREAM CG31493 INTERGENIC
2L	11493040	2L_11493040_SNP [dm3] 2L_11493040_SNP [dm6]	T	A	4.466e^-5	0.789	INTERGENIC
2L	20811680	2L_20811680_SNP [dm3] 2L_20811680_SNP [dm6]	T	C	4.470e^-5	0.789	INTRON CG9328
3R	22190532	3R_22190532_SNP [dm3] 3R_26364810_SNP [dm6]	A	G	4.570e^-5	0.789	INTERGENIC
2L	6393174	2L_6393174_SNP [dm3] 2L_6393174_SNP [dm6]	G	C	4.595e^-5	0.789	INTRON CG42368
3R	5800057	3R_5800057_SNP [dm3] 3R_9974335_SNP [dm6]	A	T	4.596e^-5	0.789	INTRON Glut4EF
2L	11493018	2L_11493018_SNP [dm3] 2L_11493018_SNP [dm6]	A	T	4.634e^-5	0.789	INTERGENIC
X	14922914	X_14922914_SNP [dm3] X_15028881_SNP [dm6]	A	T	4.635e^-5	0.789	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	17392713	2L_17392713_SNP [dm3] 2L_17392713_SNP [dm6]	A	C	4.674e^-5	0.789	INTRON CLIP-190
2R	15055684	2R_15055684_SNP [dm3] 2R_19168179_SNP [dm6]	T	C	4.723e^-5	0.789	INTRON CG10737
3L	12555420	3L_12555420_INS [dm3] 3L_12562320_INS [dm6]	A	ACTATTAATAATTGCT...	4.847e^-5	0.789	INTRON sowah
2L	11549351	2L_11549351_SNP [dm3] 2L_11549351_SNP [dm6]	G	T	4.849e^-5	0.789	EXON CR44494
2L	7947919	2L_7947919_SNP [dm3] 2L_7947919_SNP [dm6]	T	C	4.851e^-5	0.789	INTRON Snoo
2L	20811743	2L_20811743_SNP [dm3] 2L_20811743_SNP [dm6]	G	A	4.880e^-5	0.789	INTRON CG9328
2L	6771650	2L_6771650_SNP [dm3] 2L_6771650_SNP [dm6]	C	T	4.886e^-5	0.789	UPSTREAM CG11321 INTRON CG11321
X	14922902	X_14922902_SNP [dm3] X_15028869_SNP [dm6]	T	A	4.960e^-5	0.795	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	12952305	2L_12952305_SNP [dm3] 2L_12952305_SNP [dm6]	G	T	5.012e^-5	0.796	INTERGENIC
2L	11493035	2L_11493035_SNP [dm3] 2L_11493035_SNP [dm6]	G	A	5.062e^-5	0.797	INTERGENIC
2R	12011210	2R_12011210_SNP [dm3] 2R_16123705_SNP [dm6]	A	G	5.252e^-5	0.808	DOWNSTREAM Jhe INTRON CG30095	TF binding site BDTNP1_TFBS_twi
3L	5232998	3L_5232998_SNP [dm3] 3L_5239898_SNP [dm6]	C	G	5.270e^-5	0.808	INTRON shep
2R	16198323	2R_16198323_SNP [dm3] 2R_20310818_SNP [dm6]	T	C	5.294e^-5	0.808	SYNONYMOUS_CODING CG13868	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	22104546	3R_22104546_SNP [dm3] 3R_26278824_SNP [dm6]	T	C	5.303e^-5	0.808	INTERGENIC
3L	982900	3L_982900_SNP [dm3] 3L_982900_SNP [dm6]	A	C	5.421e^-5	0.816	DOWNSTREAM Glut1 INTRON Glut1
X	14924585	X_14924585_SNP [dm3] X_15030552_SNP [dm6]	C	A	5.452e^-5	0.816	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	11493023	2L_11493023_SNP [dm3] 2L_11493023_SNP [dm6]	A	G	5.573e^-5	0.816	INTERGENIC
3L	22598815	3L_22598815_SNP [dm3] 3L_22605715_SNP [dm6]	C	A	5.579e^-5	0.816	UPSTREAM CG6914 INTRON CG14459	TF binding site mE1_TFBS_cad
3R	5059006	3R_5059006_SNP [dm3] 3R_9233284_SNP [dm6]	A	C	5.839e^-5	0.816	INTRON pum	TF binding site BDTNP1_TFBS_dl
X	15559209	X_15559209_DEL [dm3] X_15665176_DEL [dm6]	AGAAACCTTATAAGTGTGGC...	A	6.115e^-5	0.816	INTRON CR43299 EXON CR43299
3L	982479	3L_982479_SNP [dm3] 3L_982479_SNP [dm6]	A	G	6.122e^-5	0.816	UTR_3_PRIME Glut1 INTRON Glut1
3R	13670602	3R_13670602_SNP [dm3] 3R_17844880_SNP [dm6]	A	C	6.149e^-5	0.816	INTRON tinc
2L	11493139	2L_11493139_SNP [dm3] 2L_11493139_SNP [dm6]	T	A	6.165e^-5	0.816	INTERGENIC
2L	9734954	2L_9734954_SNP [dm3] 2L_9734954_SNP [dm6]	A	G	6.172e^-5	0.816	INTRON Nckx30C
3L	3638666	3L_3638666_SNP [dm3] 3L_3638666_SNP [dm6]	T	A	6.215e^-5	0.816	INTRON dar1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3L	12555731	3L_12555731_INS [dm3] 3L_12562631_INS [dm6]	T	TT	6.304e^-5	0.816	INTRON sowah	TF binding site BDTNP1_TFBS_twi
2L	11482978	2L_11482978_SNP [dm3] 2L_11482978_SNP [dm6]	A	G	6.387e^-5	0.816	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	7244013	2R_7244013_SNP [dm3] 2R_11356508_SNP [dm6]	T	C	6.473e^-5	0.816	UTR_5_PRIME CG13202 UPSTREAM iotaTry DOWNSTREAM deltaTry
2R	5105518	2R_5105518_SNP [dm3] 2R_9218013_SNP [dm6]	C	A	6.525e^-5	0.816	INTERGENIC
3L	9746677	3L_9746677_SNP [dm3] 3L_9753577_SNP [dm6]	T	A	6.565e^-5	0.816	INTRON CG42268
3L	2805775	3L_2805775_DEL [dm3] 3L_2805775_DEL [dm6]	TGCATTTTTT	T	6.620e^-5	0.816	INTRON CG43444
2R	16014611	2R_16014611_SNP [dm3] 2R_20127106_SNP [dm6]	A	T	6.633e^-5	0.816	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	14922915	X_14922915_SNP [dm3] X_15028882_SNP [dm6]	G	A	6.676e^-5	0.816	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	12090757	X_12090757_SNP [dm3] X_12196724_SNP [dm6]	T	A	6.692e^-5	0.816	INTRON Ten-a
2L	5661906	2L_5661906_SNP [dm3] 2L_5661906_SNP [dm6]	C	T	6.707e^-5	0.816	UPSTREAM Hsp60C EXON CR44821
3L	17345666	3L_17345666_SNP [dm3] 3L_17352566_SNP [dm6]	G	A	6.770e^-5	0.816	UTR_5_PRIME CG7692 UPSTREAM CG7692	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	6798120	2R_6798120_SNP [dm3] 2R_10910615_SNP [dm6]	T	C	6.833e^-5	0.816	DOWNSTREAM Obp47a INTERGENIC
2R	6798123	2R_6798123_DEL [dm3] 2R_10910618_DEL [dm6]	AG	A	6.833e^-5	0.816	DOWNSTREAM Obp47a INTERGENIC
2R	9446105	2R_9446105_SNP [dm3] 2R_13558600_SNP [dm6]	C	G	6.873e^-5	0.816	NON_SYNONYMOUS_CODING CG13334 UPSTREAM snoRNA:Psi28S-1153 & 2 others	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	12011223	2R_12011223_SNP [dm3] 2R_16123718_SNP [dm6]	C	T	6.912e^-5	0.816	DOWNSTREAM Jhe INTRON CG30095	TF binding site BDTNP1_TFBS_twi
2L	20809172	2L_20809172_SNP [dm3] 2L_20809172_SNP [dm6]	G	A	6.972e^-5	0.816	UPSTREAM CG9328 INTRON CG9328	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10715598	2R_10715598_SNP [dm3] 2R_14828093_SNP [dm6]	T	A	7.054e^-5	0.816	INTERGENIC
X	10478193	X_10478193_SNP [dm3] X_10584160_SNP [dm6]	G	A	7.070e^-5	0.816	INTRON spri	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med
2R	11123284	2R_11123284_SNP [dm3] 2R_15235779_SNP [dm6]	G	A	7.079e^-5	0.816	INTRON Fs	TF binding site mE1_TFBS_chinmo
3L	9875001	3L_9875001_SNP [dm3] 3L_9881901_SNP [dm6]	G	C	7.132e^-5	0.816	INTRON CG34382
X	5379355	X_5379355_SNP [dm3] X_5485322_SNP [dm6]	T	C	7.139e^-5	0.816	INTRON SPR
2L	10616085	2L_10616085_SNP [dm3] 2L_10616085_SNP [dm6]	C	A	7.152e^-5	0.816	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2R	10585511	2R_10585511_SNP [dm3] 2R_14698006_SNP [dm6]	T	A	7.175e^-5	0.816	INTRON mspo
3L	5342340	3L_5342340_SNP [dm3] 3L_5349240_SNP [dm6]	A	T	7.178e^-5	0.816	INTRON lama
3R	4719924	3R_4719924_SNP [dm3] 3R_8894202_SNP [dm6]	A	T	7.208e^-5	0.816	INTRON pyd	TF binding site mE1_TFBS_Trl
X	7084420	X_7084420_SNP [dm3] X_7190387_SNP [dm6]	T	A	7.282e^-5	0.816	INTRON CG9650 & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2R	2766814	2R_2766814_SNP [dm3] 2R_6879309_SNP [dm6]	A	G	7.324e^-5	0.816	UTR_3_PRIME Spn42Db UPSTREAM Spn42Da INTRON CR44169	TF binding site mE1_TFBS_HSA
2R	12760760	2R_12760760_SNP [dm3] 2R_16873255_SNP [dm6]	T	C	7.329e^-5	0.816	SYNONYMOUS_CODING CG6429 UPSTREAM CG6435 DOWNSTREAM CG6421	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	19819650	2L_19819650_DEL [dm3] 2L_19819650_DEL [dm6]	GGTAT	G	7.373e^-5	0.816	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
2R	1032491	2R_1032491_SNP [dm3] 2R_5144986_SNP [dm6]	T	A	7.456e^-5	0.816	INTRON Atf6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	9644170	3L_9644170_SNP [dm3] 3L_9651070_SNP [dm6]	G	A	7.456e^-5	0.816	SYNONYMOUS_CODING CG33696 INTRON fry
2R	4561946	2R_4561946_SNP [dm3] 2R_8674441_SNP [dm6]	G	A	7.458e^-5	0.816	INTRON Acsl
3L	17345571	3L_17345571_SNP [dm3] 3L_17352471_SNP [dm6]	C	A	7.473e^-5	0.816	UTR_5_PRIME CG7692 UPSTREAM CG7692	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	15190882	3L_15190882_SNP [dm3] 3L_15197782_SNP [dm6]	G	A	7.483e^-5	0.816	INTERGENIC
3L	2726640	3L_2726640_SNP [dm3] 3L_2726640_SNP [dm6]	G	T	7.530e^-5	0.816	INTRON Mrtf
2R	5520470	2R_5520470_SNP [dm3] 2R_9632965_SNP [dm6]	A	C	7.546e^-5	0.816	INTRON Mmp2	TF binding site BDTNP1_TFBS_twi
3L	10868009	3L_10868009_SNP [dm3] 3L_10874909_SNP [dm6]	C	T	7.546e^-5	0.816	UTR_3_PRIME tna DOWNSTREAM tna	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	26874892	3R_26874892_SNP [dm3] 3R_31049170_SNP [dm6]	G	C	7.546e^-5	0.816	NON_SYNONYMOUS_CODING Aph-4 UPSTREAM Aph-4
2R	6917216	2R_6917216_SNP [dm3] 2R_11029711_SNP [dm6]	C	G	7.652e^-5	0.816	INTRON luna
3L	2805769	3L_2805769_SNP [dm3] 3L_2805769_SNP [dm6]	G	T	7.670e^-5	0.816	INTRON CG43444
2L	16401384	2L_16401384_SNP [dm3] 2L_16401384_SNP [dm6]	C	T	7.709e^-5	0.816	INTRON CG5888
2L	18398772	2L_18398772_SNP [dm3] 2L_18398772_SNP [dm6]	C	T	7.818e^-5	0.816	INTERGENIC
3R	27172972	3R_27172972_SNP [dm3] 3R_31347250_SNP [dm6]	T	C	7.868e^-5	0.816	INTRON CG34347
3R	3801664	3R_3801664_SNP [dm3] 3R_7975942_SNP [dm6]	T	C	7.872e^-5	0.816	NON_SYNONYMOUS_CODING CD98hc	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	19557565	3R_19557565_SNP [dm3] 3R_23731843_SNP [dm6]	A	G	7.933e^-5	0.816	SYNONYMOUS_CODING Rpn9 DOWNSTREAM CG10365	TF binding site mE1_TFBS_sens
2L	7452670	2L_7452670_DEL [dm3] 2L_7452670_DEL [dm6]	TT	T	7.945e^-5	0.816	INTRON Gr28a	TF binding site mE1_TFBS_HSA
3L	12555408	3L_12555408_SNP [dm3] 3L_12562308_SNP [dm6]	C	T	7.945e^-5	0.816	INTRON sowah
3L	4644199	3L_4644199_SNP [dm3] 3L_4644199_SNP [dm6]	C	T	8.067e^-5	0.816	NON_SYNONYMOUS_CODING axo	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	11948429	2R_11948429_SNP [dm3] 2R_16060924_SNP [dm6]	T	G	8.074e^-5	0.816	DOWNSTREAM CG8405 INTERGENIC
3L	3844478	3L_3844478_SNP [dm3] 3L_3844478_SNP [dm6]	T	A	8.186e^-5	0.816	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
X	7084467	X_7084467_SNP [dm3] X_7190434_SNP [dm6]	G	A	8.201e^-5	0.816	INTRON CG9650 & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
3R	22189552	3R_22189552_SNP [dm3] 3R_26363830_SNP [dm6]	A	T	8.234e^-5	0.816	INTERGENIC
3R	22189568	3R_22189568_SNP [dm3] 3R_26363846_SNP [dm6]	T	C	8.234e^-5	0.816	INTERGENIC
2L	5657927	2L_5657927_SNP [dm3] 2L_5657927_SNP [dm6]	C	T	8.364e^-5	0.816	INTRON CG31646	TF binding site BDTNP1_TFBS_dl
2L	4210362	2L_4210362_SNP [dm3] 2L_4210362_SNP [dm6]	G	T	8.369e^-5	0.816	INTRON ft	TF binding site mE1_TFBS_inv
2R	8509506	2R_8509506_DEL [dm3] 2R_12622001_DEL [dm6]	AA	A	8.423e^-5	0.816	UTR_3_PRIME Galphaq DOWNSTREAM Galphaq
3R	18480211	3R_18480211_DEL [dm3] 3R_22654489_DEL [dm6]	GAATGTAAA	T	8.436e^-5	0.816	INTRON CG45058
2L	11481705	2L_11481705_SNP [dm3] 2L_11481705_SNP [dm6]	G	A	8.453e^-5	0.816	INTERGENIC
3R	6831117	3R_6831117_DEL [dm3] 3R_11005395_DEL [dm6]	GG	G	8.490e^-5	0.816	INTRON CG34114
3L	4954558	3L_4954558_SNP [dm3] 3L_4954558_SNP [dm6]	G	T	8.539e^-5	0.816	INTRON Con
2R	7476586	2R_7476586_DEL [dm3] 2R_11589081_DEL [dm6]	AGGAGGA	A	8.596e^-5	0.816	CODON_DELETION tou UPSTREAM snoRNA:Psi28S-1936	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	9489674	2L_9489674_SNP [dm3] 2L_9489674_SNP [dm6]	A	G	8.647e^-5	0.816	INTERGENIC
3R	13753627	3R_13753627_SNP [dm3] 3R_17927905_SNP [dm6]	A	G	8.664e^-5	0.816	INTRON cpo
X	18123013	X_18123013_SNP [dm3] X_18228980_SNP [dm6]	A	T	8.677e^-5	0.816	UPSTREAM CR45622 INTERGENIC
3L	5342339	3L_5342339_SNP [dm3] 3L_5349239_SNP [dm6]	G	T	8.692e^-5	0.816	INTRON lama
2L	9808448	2L_9808448_SNP [dm3] 2L_9808448_SNP [dm6]	T	A	8.741e^-5	0.816	INTRON nAChRalpha6
3L	482315	3L_482315_SNP [dm3] 3L_482315_SNP [dm6]	A	C	8.750e^-5	0.816	INTRON klar
3L	10632185	3L_10632185_SNP [dm3] 3L_10639085_SNP [dm6]	A	T	8.911e^-5	0.824	UPSTREAM E_z_ & 1 other INTRON CG8009
3L	3350897	3L_3350897_SNP [dm3] 3L_3350897_SNP [dm6]	A	G	8.984e^-5	0.824	INTRON kst
2L	5862095	2L_5862095_SNP [dm3] 2L_5862095_SNP [dm6]	G	T	9.015e^-5	0.824	INTRON rau
3R	18480143	3R_18480143_DEL [dm3] 3R_22654421_DEL [dm6]	CA	G	9.040e^-5	0.824	INTRON CG45058
3R	26433705	3R_26433705_SNP [dm3] 3R_30607983_SNP [dm6]	A	T	9.064e^-5	0.824	SPLICE_SITE_REGION CG31016 INTRON CG31016
2L	6771514	2L_6771514_DEL [dm3] 2L_6771514_DEL [dm6]	TAA	C	9.192e^-5	0.824	UPSTREAM CG11321 INTRON CG11321
2R	2758387	2R_2758387_SNP [dm3] 2R_6870882_SNP [dm6]	A	C	9.349e^-5	0.824	INTRON coro	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
X	15559254	X_15559254_SNP [dm3] X_15665221_SNP [dm6]	C	T	9.439e^-5	0.824	INTRON CR43299 EXON CR43299
2R	20006879	2R_20006879_SNP [dm3] 2R_24119356_SNP [dm6]	A	C	9.485e^-5	0.824	INTRON CG3257	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
2L	11229625	2L_11229625_SNP [dm3] 2L_11229625_SNP [dm6]	A	G	9.575e^-5	0.824	INTRON ab	TF binding site mE1_TFBS_HSA
3R	19200993	3R_19200993_INS [dm3] 3R_23375271_INS [dm6]	A	AAA	9.580e^-5	0.824	DOWNSTREAM CG4393 INTERGENIC
2R	12011521	2R_12011521_SNP [dm3] 2R_16124016_SNP [dm6]	T	C	9.589e^-5	0.824	UPSTREAM spin INTRON CG30095	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_Ubx
3L	16233252	3L_16233252_SNP [dm3] 3L_16240152_SNP [dm6]	G	A	9.640e^-5	0.824	DOWNSTREAM l_3_72Dr INTERGENIC
3R	13415548	3R_13415548_SNP [dm3] 3R_17589826_SNP [dm6]	G	A	9.660e^-5	0.824	INTERGENIC
X	5246317	X_5246317_SNP [dm3] X_5352284_SNP [dm6]	A	G	9.733e^-5	0.824	SYNONYMOUS_CODING SK	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
X	5246330	X_5246330_SNP [dm3] X_5352297_SNP [dm6]	T	G	9.733e^-5	0.824	NON_SYNONYMOUS_CODING SK	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
X	5246331	X_5246331_SNP [dm3] X_5352298_SNP [dm6]	T	G	9.733e^-5	0.824	STOP_GAINED SK	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
3L	1935439	3L_1935439_SNP [dm3] 3L_1935439_SNP [dm6]	G	A	9.778e^-5	0.824	SYNONYMOUS_CODING CG5687	TF binding site mE1_TFBS_sens
3L	19250886	3L_19250886_SNP [dm3] 3L_19257786_SNP [dm6]	A	T	9.820e^-5	0.824	UTR_3_PRIME nes DOWNSTREAM nes & 1 other
3R	26435098	3R_26435098_SNP [dm3] 3R_30609376_SNP [dm6]	G	T	9.879e^-5	0.824	UTR_3_PRIME CG31016
3L	3591945	3L_3591945_SNP [dm3] 3L_3591945_SNP [dm6]	G	T	9.895e^-5	0.824	INTRON Eip63E	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	5661907	2L_5661907_SNP [dm3] 2L_5661907_SNP [dm6]	A	G	9.898e^-5	0.824	UPSTREAM Hsp60C EXON CR44821
2L	19819648	2L_19819648_SNP [dm3] 2L_19819648_SNP [dm6]	T	A	9.951e^-5	0.824	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3R	19557427	3R_19557427_SNP [dm3] 3R_23731705_SNP [dm6]	G	T	9.963e^-5	0.824	SYNONYMOUS_CODING Rpn9 DOWNSTREAM CG10365	TF binding site mE1_TFBS_sens
2L	14362718	2L_14362718_SNP [dm3] 2L_14362718_SNP [dm6]	C	A	9.972e^-5	0.824	SYNONYMOUS_CODING spel1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	19435668	X_19435668_SNP [dm3] X_19541635_SNP [dm6]	G	A	9.981e^-5	0.824	INTRON CG32532
2L	20800900	2L_20800900_SNP [dm3] 2L_20800900_SNP [dm6]	C	T	1.003e^-4	0.825	INTRON CG9328	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
3L	1152866	3L_1152866_SNP [dm3] 3L_1152866_SNP [dm6]	G	T	1.012e^-4	0.828	INTRON bab2	TF binding site mE1_TFBS_cad
2L	9338319	2L_9338319_SNP [dm3] 2L_9338319_SNP [dm6]	C	T	1.022e^-4	0.832	SYNONYMOUS_CODING Eaat1
2L	20811774	2L_20811774_SNP [dm3] 2L_20811774_SNP [dm6]	C	A	1.030e^-4	0.836	INTRON CG9328
2L	661134	2L_661134_SNP [dm3] 2L_661134_SNP [dm6]	A	G	1.040e^-4	0.837	INTRON ds	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
3L	2739280	3L_2739280_SNP [dm3] 3L_2739280_SNP [dm6]	T	A	1.044e^-4	0.837	UPSTREAM Acp62F INTRON Mrtf
2R	8731329	2R_8731329_SNP [dm3] 2R_12843824_SNP [dm6]	C	T	1.047e^-4	0.837	SYNONYMOUS_CODING Or49b	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	8732341	2R_8732341_INS [dm3] 2R_12844836_INS [dm6]	A	AA	1.049e^-4	0.837	DOWNSTREAM CG17575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	1362458	3L_1362458_SNP [dm3] 3L_1362458_SNP [dm6]	C	A	1.063e^-4	0.84	INTRON Ptp61F	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	13670509	3R_13670509_SNP [dm3] 3R_17844787_SNP [dm6]	T	C	1.070e^-4	0.84	INTRON tinc
2L	20827688	2L_20827688_SNP [dm3] 2L_20827688_SNP [dm6]	C	T	1.070e^-4	0.84	UTR_3_PRIME CG9331
2L	1294829	2L_1294829_SNP [dm3] 2L_1294829_SNP [dm6]	T	A	1.071e^-4	0.84	UTR_3_PRIME robo3 DOWNSTREAM robo3
2L	10616087	2L_10616087_SNP [dm3] 2L_10616087_SNP [dm6]	T	C	1.078e^-4	0.841	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2L	19723140	2L_19723140_SNP [dm3] 2L_19723140_SNP [dm6]	T	C	1.088e^-4	0.841	INTRON Lar
3L	9353669	3L_9353669_SNP [dm3] 3L_9360569_SNP [dm6]	C	A	1.092e^-4	0.841	UTR_5_PRIME CG34455 DOWNSTREAM CG32039	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	9749386	3L_9749386_SNP [dm3] 3L_9756286_SNP [dm6]	G	A	1.094e^-4	0.841	INTRON CG42268
3L	2739349	3L_2739349_SNP [dm3] 3L_2739349_SNP [dm6]	C	T	1.099e^-4	0.841	UPSTREAM Acp62F INTRON Mrtf
2L	8942183	2L_8942183_SNP [dm3] 2L_8942183_SNP [dm6]	T	A	1.100e^-4	0.841	UTR_3_PRIME CG9515 UPSTREAM CG9510
2L	995450	2L_995450_SNP [dm3] 2L_995450_SNP [dm6]	C	G	1.113e^-4	0.846	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	12804179	2L_12804179_SNP [dm3] 2L_12804179_SNP [dm6]	C	T	1.118e^-4	0.846	INTERGENIC
2R	19073854	2R_19073854_SNP [dm3] 2R_23186331_SNP [dm6]	T	A	1.120e^-4	0.846	INTRON CG34371	TF binding site BDTNP1_TFBS_twi
2R	9778056	2R_9778056_SNP [dm3] 2R_13890551_SNP [dm6]	G	A	1.130e^-4	0.849	SYNONYMOUS_CODING shot INTRON shot	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	10616032	2L_10616032_SNP [dm3] 2L_10616032_SNP [dm6]	T	A	1.140e^-4	0.849	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2R	19086224	2R_19086224_SNP [dm3] 2R_23198701_SNP [dm6]	A	T	1.146e^-4	0.849	INTRON CG34371	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	17354282	3L_17354282_SNP [dm3] 3L_17361182_SNP [dm6]	T	C	1.150e^-4	0.849	UTR_3_PRIME tap	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	9554614	2L_9554614_SNP [dm3] 2L_9554614_SNP [dm6]	T	A	1.157e^-4	0.849	INTRON jp
3L	479210	3L_479210_SNP [dm3] 3L_479210_SNP [dm6]	C	T	1.166e^-4	0.849	INTRON klar	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2L	14796666	2L_14796666_SNP [dm3] 2L_14796666_SNP [dm6]	C	T	1.167e^-4	0.849	UPSTREAM CG18420 INTERGENIC
2L	7452668	2L_7452668_SNP [dm3] 2L_7452668_SNP [dm6]	A	T	1.169e^-4	0.849	INTRON Gr28a	TF binding site mE1_TFBS_HSA
2R	5520459	2R_5520459_SNP [dm3] 2R_9632954_SNP [dm6]	C	A	1.171e^-4	0.849	INTRON Mmp2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	12555643	3L_12555643_SNP [dm3] 3L_12562543_SNP [dm6]	T	A	1.174e^-4	0.849	INTRON sowah
2L	9443271	2L_9443271_INS [dm3] 2L_9443271_INS [dm6]	A	ACATA	1.178e^-4	0.849	INTRON numb
2L	1028587	2L_1028587_SNP [dm3] 2L_1028587_SNP [dm6]	C	T	1.178e^-4	0.849	INTRON IA-2
3R	22189565	3R_22189565_SNP [dm3] 3R_26363843_SNP [dm6]	C	T	1.191e^-4	0.853	INTERGENIC
2R	19073782	2R_19073782_SNP [dm3] 2R_23186259_SNP [dm6]	A	T	1.192e^-4	0.853	DOWNSTREAM CG13539 INTRON CG34371	TF binding site BDTNP1_TFBS_twi
3L	4191002	3L_4191002_SNP [dm3] 3L_4191002_SNP [dm6]	G	A	1.204e^-4	0.858	SYNONYMOUS_CODING tipE INTRON CG18675	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	5260243	3R_5260243_SNP [dm3] 3R_9434521_SNP [dm6]	A	T	1.214e^-4	0.862	INTRON ps
3R	26433094	3R_26433094_SNP [dm3] 3R_30607372_SNP [dm6]	T	C	1.223e^-4	0.863	SYNONYMOUS_CODING CG31016	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	18103647	2L_18103647_DEL [dm3] 2L_18103647_DEL [dm6]	ATGCCGCCCAA...	A	1.224e^-4	0.863	INTERGENIC
2R	8770843	2R_8770843_SNP [dm3] 2R_12883338_SNP [dm6]	T	A	1.239e^-4	0.87	UPSTREAM CR45141 DOWNSTREAM Aats-asp INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	11998614	2R_11998614_SNP [dm3] 2R_16111109_SNP [dm6]	T	C	1.257e^-4	0.879	INTRON Asph	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	7392515	3L_7392515_SNP [dm3] 3L_7399415_SNP [dm6]	A	T	1.265e^-4	0.88	UPSTREAM CG18417 INTRON CG8562	TF binding site mE1_TFBS_cad
3L	19049873	3L_19049873_SNP [dm3] 3L_19056773_SNP [dm6]	T	C	1.271e^-4	0.88	INTERGENIC
X	14922995	X_14922995_SNP [dm3] X_15028962_SNP [dm6]	G	A	1.277e^-4	0.88	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	8955919	2L_8955919_SNP [dm3] 2L_8955919_SNP [dm6]	C	T	1.280e^-4	0.88	UPSTREAM CG31886 INTRON CG31886	TF binding site mE1_TFBS_eve
2L	20808437	2L_20808437_SNP [dm3] 2L_20808437_SNP [dm6]	A	G	1.303e^-4	0.88	INTRON CG9328
3R	22110608	3R_22110608_SNP [dm3] 3R_26284886_SNP [dm6]	G	A	1.308e^-4	0.88	INTERGENIC	TF binding site BDTNP1_TFBS_da
3R	14840608	3R_14840608_SNP [dm3] 3R_19014886_SNP [dm6]	T	G	1.311e^-4	0.88	INTRON gukh	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	13782308	2R_13782308_SNP [dm3] 2R_17894803_SNP [dm6]	A	G	1.314e^-4	0.88	UPSTREAM CG14491 & 1 other INTRON Elk	TF binding site BDTNP1_TFBS_twi
2L	8941182	2L_8941182_SNP [dm3] 2L_8941182_SNP [dm6]	A	G	1.315e^-4	0.88	SYNONYMOUS_CODING CG9510 DOWNSTREAM CG9515	TF binding site mE1_TFBS_cad
2R	9442489	2R_9442489_SNP [dm3] 2R_13554984_SNP [dm6]	A	C	1.323e^-4	0.88	UPSTREAM link INTRON Roe1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA
2R	9442494	2R_9442494_SNP [dm3] 2R_13554989_SNP [dm6]	C	T	1.323e^-4	0.88	UPSTREAM link INTRON Roe1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA
2R	13798335	2R_13798335_SNP [dm3] 2R_17910830_SNP [dm6]	T	G	1.328e^-4	0.88	INTRON Elk
3R	13670437	3R_13670437_SNP [dm3] 3R_17844715_SNP [dm6]	A	T	1.338e^-4	0.88	INTRON tinc
2L	11493043	2L_11493043_SNP [dm3] 2L_11493043_SNP [dm6]	T	A	1.339e^-4	0.88	INTERGENIC
2L	993253	2L_993253_SNP [dm3] 2L_993253_SNP [dm6]	C	T	1.342e^-4	0.88	INTERGENIC	TF binding site mE1_TFBS_chinmo
2L	19619285	2L_19619285_SNP [dm3] 2L_19619285_SNP [dm6]	A	G	1.350e^-4	0.88	INTRON Lar
X	2369743	X_2369743_INS [dm3] X_2475710_INS [dm6]	C	CAC	1.351e^-4	0.88	DOWNSTREAM trol INTRON trol
3R	22189781	3R_22189781_SNP [dm3] 3R_26364059_SNP [dm6]	A	G	1.361e^-4	0.88	INTERGENIC
2R	13530592	2R_13530592_SNP [dm3] 2R_17643087_SNP [dm6]	A	C	1.372e^-4	0.88	INTERGENIC
3L	2509817	3L_2509817_SNP [dm3] 3L_2509817_SNP [dm6]	G	A	1.390e^-4	0.88	SYNONYMOUS_CODING Spn INTRON Spn	TF binding site mE1_TFBS_chinmo
2L	6302979	2L_6302979_SNP [dm3] 2L_6302979_SNP [dm6]	C	T	1.390e^-4	0.88	INTRON Ddr
2R	10510839	2R_10510839_SNP [dm3] 2R_14623334_SNP [dm6]	C	T	1.393e^-4	0.88	UPSTREAM snoRNA:Me28S-G2703a & 3 others DOWNSTREAM snoRNA:Me28S-C3227b & 3 others INTRON Uhg5 EXON snoRNA:Me28S-A992
X	9180152	X_9180152_SNP [dm3] X_9286119_SNP [dm6]	C	T	1.394e^-4	0.88	SYNONYMOUS_CODING lz
2R	8835248	2R_8835248_SNP [dm3] 2R_12947743_SNP [dm6]	A	T	1.394e^-4	0.88	DOWNSTREAM CG44251 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	13753462	3R_13753462_SNP [dm3] 3R_17927740_SNP [dm6]	T	C	1.396e^-4	0.88	INTRON cpo	TF binding site mE1_TFBS_disco mE1_TFBS_HSA
2R	5232331	2R_5232331_SNP [dm3] 2R_9344826_SNP [dm6]	G	T	1.397e^-4	0.88	UPSTREAM Or45a INTRON CG13954 & 1 other
2L	11493015	2L_11493015_SNP [dm3] 2L_11493015_SNP [dm6]	T	G	1.402e^-4	0.88	INTERGENIC
2R	2758397	2R_2758397_SNP [dm3] 2R_6870892_SNP [dm6]	T	A	1.404e^-4	0.88	INTRON coro	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2L	8959897	2L_8959897_SNP [dm3] 2L_8959897_SNP [dm6]	G	C	1.408e^-4	0.88	UTR_3_PRIME CG9525 UPSTREAM CG31886 DOWNSTREAM CG9525
2R	16014555	2R_16014555_SNP [dm3] 2R_20127050_SNP [dm6]	C	G	1.414e^-4	0.88	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2L	11148824	2L_11148824_SNP [dm3] 2L_11148824_SNP [dm6]	G	T	1.417e^-4	0.88	NON_SYNONYMOUS_CODING Gyc32E	TF binding site BDTNP1_TFBS_prd
2L	14363896	2L_14363896_SNP [dm3] 2L_14363896_SNP [dm6]	G	A	1.421e^-4	0.88	SYNONYMOUS_CODING spel1	TF binding site mE1_TFBS_cad
3L	7001979	3L_7001979_SNP [dm3] 3L_7008879_SNP [dm6]	A	G	1.434e^-4	0.88	INTRON Mp
X	5270845	X_5270845_SNP [dm3] X_5376812_SNP [dm6]	A	T	1.453e^-4	0.88	INTRON SK
2L	10616120	2L_10616120_SNP [dm3] 2L_10616120_SNP [dm6]	C	T	1.458e^-4	0.88	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2R	17323502	2R_17323502_SNP [dm3] 2R_21435997_SNP [dm6]	C	T	1.459e^-4	0.88	INTRON Sdc
X	12935960	X_12935960_SNP [dm3] X_13041927_SNP [dm6]	C	T	1.466e^-4	0.88	INTRON rad
2L	19819697	2L_19819697_SNP [dm3] 2L_19819697_SNP [dm6]	A	T	1.477e^-4	0.88	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3L	22653289	3L_22653289_SNP [dm3] 3L_22660189_SNP [dm6]	G	C	1.478e^-4	0.88	INTERGENIC
2L	12249740	2L_12249740_SNP [dm3] 2L_12249740_SNP [dm6]	G	A	1.478e^-4	0.88	INTRON aret
X	7233836	X_7233836_DEL [dm3] X_7339803_DEL [dm6]	TT	T	1.480e^-4	0.88	INTRON CR44357 & 2 others	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	8580491	3L_8580491_SNP [dm3] 3L_8587391_SNP [dm6]	T	C	1.482e^-4	0.88	SYNONYMOUS_CODING CG43078 UTR_5_PRIME CG43078	TF binding site mE1_TFBS_chinmo
3L	16878402	3L_16878402_SNP [dm3] 3L_16885302_SNP [dm6]	A	T	1.484e^-4	0.88	INTRON Lmpt
2L	19819640	2L_19819640_SNP [dm3] 2L_19819640_SNP [dm6]	C	G	1.496e^-4	0.88	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn
3L	9875003	3L_9875003_SNP [dm3] 3L_9881903_SNP [dm6]	A	T	1.500e^-4	0.88	INTRON CG34382
X	14429843	X_14429843_SNP [dm3] X_14535810_SNP [dm6]	C	T	1.509e^-4	0.88	INTERGENIC
2L	18082159	2L_18082159_SNP [dm3] 2L_18082159_SNP [dm6]	G	A	1.514e^-4	0.88	SPLICE_SITE_REGION ninaD DOWNSTREAM Arr1 INTRON ninaD
2R	13790458	2R_13790458_SNP [dm3] 2R_17902953_SNP [dm6]	A	T	1.517e^-4	0.88	INTRON Elk
2L	8959462	2L_8959462_SNP [dm3] 2L_8959462_SNP [dm6]	C	G	1.520e^-4	0.88	UTR_3_PRIME CG9525 UPSTREAM CG31886 DOWNSTREAM CG9525
2L	824210	2L_824210_SNP [dm3] 2L_824210_SNP [dm6]	T	C	1.527e^-4	0.88	UTR_3_PRIME CG3662 DOWNSTREAM CG3862 INTRON CG3662
3R	26433105	3R_26433105_SNP [dm3] 3R_30607383_SNP [dm6]	T	C	1.531e^-4	0.88	SYNONYMOUS_CODING CG31016	TF binding site mE1_TFBS_HSA
2R	6786443	2R_6786443_SNP [dm3] 2R_10898938_SNP [dm6]	C	T	1.536e^-4	0.88	SYNONYMOUS_CODING Rpb5	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	4794149	X_4794149_SNP [dm3] X_4900116_SNP [dm6]	C	A	1.544e^-4	0.88	INTRON CG42594
2R	9238149	2R_9238149_SNP [dm3] 2R_13350644_SNP [dm6]	A	T	1.548e^-4	0.88	INTRON CR44206
2R	12060869	2R_12060869_SNP [dm3] 2R_16173364_SNP [dm6]	C	T	1.551e^-4	0.88	NON_SYNONYMOUS_CODING Ptp52F	TF binding site mE1_TFBS_cad
2R	19071713	2R_19071713_SNP [dm3] 2R_23184190_SNP [dm6]	T	G	1.553e^-4	0.88	UTR_5_PRIME CG13539 UPSTREAM CG13539 INTRON CG34371
2L	15165137	2L_15165137_SNP [dm3] 2L_15165137_SNP [dm6]	C	T	1.564e^-4	0.88	SYNONYMOUS_CODING CG4168	TF binding site mE1_TFBS_cad
3L	18370150	3L_18370150_SNP [dm3] 3L_18377050_SNP [dm6]	T	A	1.564e^-4	0.88	INTERGENIC
2R	10715522	2R_10715522_SNP [dm3] 2R_14828017_SNP [dm6]	G	A	1.572e^-4	0.88	INTERGENIC
2R	17173093	2R_17173093_SNP [dm3] 2R_21285588_SNP [dm6]	C	G	1.573e^-4	0.88	UTR_3_PRIME MFS16 & 1 other
3L	8232365	3L_8232365_SNP [dm3] 3L_8239265_SNP [dm6]	C	G	1.583e^-4	0.88	SYNONYMOUS_CODING CG7213 INTRON Dscam4
3R	18352604	3R_18352604_SNP [dm3] 3R_22526882_SNP [dm6]	G	A	1.586e^-4	0.88	UTR_5_PRIME CG5346	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
2L	6470770	2L_6470770_SNP [dm3] 2L_6470770_SNP [dm6]	C	T	1.600e^-4	0.88	INTRON mmy
X	9591568	X_9591568_SNP [dm3] X_9697535_SNP [dm6]	C	T	1.604e^-4	0.88	UTR_3_PRIME btd
2L	11017533	2L_11017533_SNP [dm3] 2L_11017533_SNP [dm6]	T	C	1.608e^-4	0.88	NON_SYNONYMOUS_CODING CG14913 DOWNSTREAM Acp32CD INTRON Samuel
2L	14866714	2L_14866714_SNP [dm3] 2L_14866714_SNP [dm6]	A	C	1.608e^-4	0.88	INTERGENIC
2R	19073140	2R_19073140_SNP [dm3] 2R_23185617_SNP [dm6]	C	T	1.608e^-4	0.88	DOWNSTREAM CG13539 INTRON CG34371	TF binding site mE1_TFBS_sens
3L	2509711	3L_2509711_SNP [dm3] 3L_2509711_SNP [dm6]	G	A	1.614e^-4	0.88	INTRON Spn	TF binding site mE1_TFBS_chinmo
3L	2100051	3L_2100051_SNP [dm3] 3L_2100051_SNP [dm6]	A	G	1.619e^-4	0.88	SYNONYMOUS_CODING sls	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	5310786	3L_5310786_SNP [dm3] 3L_5317686_SNP [dm6]	G	A	1.621e^-4	0.88	INTERGENIC
2R	18283473	2R_18283473_SNP [dm3] 2R_22395968_SNP [dm6]	C	T	1.624e^-4	0.88	INTRON babos	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	5270770	X_5270770_SNP [dm3] X_5376737_SNP [dm6]	A	G	1.628e^-4	0.88	INTRON SK
X	11354203	X_11354203_SNP [dm3] X_11460170_SNP [dm6]	G	A	1.632e^-4	0.88	DOWNSTREAM HP5 INTRON CG43155
3R	24099045	3R_24099045_DEL [dm3] 3R_28273323_DEL [dm6]	AA	A	1.640e^-4	0.88	INTERGENIC
3R	5800621	3R_5800621_SNP [dm3] 3R_9974899_SNP [dm6]	G	C	1.651e^-4	0.88	INTRON Glut4EF
2L	20223783	2L_20223783_SNP [dm3] 2L_20223783_SNP [dm6]	C	A	1.657e^-4	0.88	INTERGENIC	transposable element FlyBase
3L	4257068	3L_4257068_SNP [dm3] 3L_4257068_SNP [dm6]	A	G	1.657e^-4	0.88	SPLICE_SITE_REGION CG15011 INTRON CG15011
2L	621033	2L_621033_SNP [dm3] 2L_621033_SNP [dm6]	T	C	1.658e^-4	0.88	SYNONYMOUS_CODING lectin-21Cb	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5790154	3R_5790154_SNP [dm3] 3R_9964432_SNP [dm6]	C	T	1.660e^-4	0.88	INTRON Glut4EF
X	14698279	X_14698279_SNP [dm3] X_14804246_SNP [dm6]	A	G	1.667e^-4	0.88	INTRON rut
3L	22638544	3L_22638544_SNP [dm3] 3L_22645444_SNP [dm6]	G	A	1.670e^-4	0.88	UPSTREAM CG33766 & 1 other DOWNSTREAM CR45381 INTERGENIC
2R	16360349	2R_16360349_SNP [dm3] 2R_20472844_SNP [dm6]	A	C	1.686e^-4	0.88	INTRON CG12484
2R	7244367	2R_7244367_SNP [dm3] 2R_11356862_SNP [dm6]	C	A	1.691e^-4	0.88	SYNONYMOUS_CODING iotaTry UPSTREAM CG13202 DOWNSTREAM deltaTry & 1 other	TF binding site mE1_TFBS_sens
3R	22843972	3R_22843972_SNP [dm3] 3R_27018250_SNP [dm6]	T	A	1.694e^-4	0.88	NON_SYNONYMOUS_CODING CG17192 DOWNSTREAM CG17191 INTRON RYa-R
2R	18411981	2R_18411981_SNP [dm3] 2R_22524476_SNP [dm6]	G	A	1.695e^-4	0.88	INTRON px
2L	8931773	2L_8931773_SNP [dm3] 2L_8931773_SNP [dm6]	C	T	1.701e^-4	0.88	SYNONYMOUS_CODING CG34398 INTRON CG34398
X	8647226	X_8647226_SNP [dm3] X_8753193_SNP [dm6]	C	A	1.701e^-4	0.88	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	15558488	3L_15558488_DEL [dm3] 3L_15565388_DEL [dm6]	GAAATCT	G	1.705e^-4	0.88	UTR_3_PRIME CG7427 UPSTREAM CG6498 DOWNSTREAM CG7427	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Ubx
2L	638429	2L_638429_SNP [dm3] 2L_638429_SNP [dm6]	C	G	1.712e^-4	0.88	INTERGENIC
2L	20223721	2L_20223721_SNP [dm3] 2L_20223721_SNP [dm6]	A	T	1.721e^-4	0.88	INTERGENIC	transposable element FlyBase
X	10000833	X_10000833_SNP [dm3] X_10106800_SNP [dm6]	T	C	1.730e^-4	0.88	INTRON RhoU
3L	9838773	3L_9838773_SNP [dm3] 3L_9845673_SNP [dm6]	G	C	1.735e^-4	0.88	INTRON RasGAP1
3R	24628661	3R_24628661_SNP [dm3] 3R_28802939_SNP [dm6]	G	A	1.748e^-4	0.88	INTERGENIC
2L	11483018	2L_11483018_DEL [dm3] 2L_11483018_DEL [dm6]	TTA	T	1.748e^-4	0.88	INTERGENIC	TF binding site mE1_TFBS_HSA
2R	15071598	2R_15071598_SNP [dm3] 2R_19184093_SNP [dm6]	T	C	1.755e^-4	0.88	INTRON hppy
X	14923651	X_14923651_SNP [dm3] X_15029618_SNP [dm6]	A	T	1.757e^-4	0.88	INTRON hiw & 1 other
2L	129999	2L_129999_DEL [dm3] 2L_129999_DEL [dm6]	TTAGATGT	T	1.759e^-4	0.88	UPSTREAM CG3164 INTRON CG11455 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
X	14927943	X_14927943_SNP [dm3] X_15033910_SNP [dm6]	T	C	1.770e^-4	0.88	SYNONYMOUS_CODING be UTR_3_PRIME be INTRON hiw
2R	13792948	2R_13792948_SNP [dm3] 2R_17905443_SNP [dm6]	T	A	1.779e^-4	0.88	INTRON Elk
3L	4192117	3L_4192117_SNP [dm3] 3L_4192117_SNP [dm6]	C	A	1.782e^-4	0.88	INTRON CG18675 & 1 other
3L	12555413	3L_12555413_SNP [dm3] 3L_12562313_SNP [dm6]	T	A	1.787e^-4	0.88	INTRON sowah
3L	12555414	3L_12555414_SNP [dm3] 3L_12562314_SNP [dm6]	T	A	1.787e^-4	0.88	INTRON sowah
X	17428065	X_17428065_SNP [dm3] X_17534032_SNP [dm6]	G	A	1.788e^-4	0.88	INTRON CG43658	TF binding site mE1_TFBS_chinmo
X	17428071	X_17428071_SNP [dm3] X_17534038_SNP [dm6]	T	G	1.788e^-4	0.88	INTRON CG43658	TF binding site mE1_TFBS_chinmo
2R	12556418	2R_12556418_DEL [dm3] 2R_16668913_DEL [dm6]	TA	T	1.791e^-4	0.88	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3L	5232834	3L_5232834_SNP [dm3] 3L_5239734_SNP [dm6]	T	A	1.796e^-4	0.88	INTRON shep
2L	20223662	2L_20223662_SNP [dm3] 2L_20223662_SNP [dm6]	T	G	1.802e^-4	0.88	INTERGENIC	transposable element FlyBase
3R	21631106	3R_21631106_SNP [dm3] 3R_25805384_SNP [dm6]	A	G	1.810e^-4	0.88	INTERGENIC
3L	11938074	3L_11938074_SNP [dm3] 3L_11944974_SNP [dm6]	T	G	1.813e^-4	0.88	UPSTREAM CG5883 INTERGENIC
2R	17657071	2R_17657071_SNP [dm3] 2R_21769566_SNP [dm6]	A	G	1.816e^-4	0.88	NON_SYNONYMOUS_CODING CG30395 SPLICE_SITE_REGION CG30395	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	479337	3L_479337_SNP [dm3] 3L_479337_SNP [dm6]	C	T	1.816e^-4	0.88	INTRON klar	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	8096067	X_8096067_SNP [dm3] X_8202034_SNP [dm6]	T	C	1.817e^-4	0.88	INTRON sdt	TF binding site mE1_TFBS_inv
3L	8383409	3L_8383409_SNP [dm3] 3L_8390309_SNP [dm6]	A	G	1.821e^-4	0.88	SYNONYMOUS_CODING ImpE1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	17014719	2L_17014719_SNP [dm3] 2L_17014719_SNP [dm6]	T	C	1.822e^-4	0.88	UPSTREAM CG6304 INTERGENIC
2L	20814039	2L_20814039_SNP [dm3] 2L_20814039_SNP [dm6]	C	A	1.828e^-4	0.88	UTR_3_PRIME CG9328 DOWNSTREAM CG33322 & 1 other
X	14922990	X_14922990_INS [dm3] X_15028957_INS [dm6]	T	TGACTTG	1.848e^-4	0.88	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	314335	2L_314335_DEL [dm3] 2L_314335_DEL [dm6]	GAGTGATGAATTTTCTGTTC...	G	1.853e^-4	0.88	INTRON Plc21C
2R	12559260	2R_12559260_SNP [dm3] 2R_16671755_SNP [dm6]	G	A	1.854e^-4	0.88	UTR_3_PRIME CG34457 UPSTREAM CG34458
2L	9584727	2L_9584727_SNP [dm3] 2L_9584727_SNP [dm6]	G	C	1.859e^-4	0.88	EXON CR43621	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	3367716	X_3367716_SNP [dm3] X_3473683_SNP [dm6]	A	C	1.862e^-4	0.88	UPSTREAM CG12206 INTRON CR44999 & 1 other
2R	5524515	2R_5524515_SNP [dm3] 2R_9637010_SNP [dm6]	G	A	1.862e^-4	0.88	INTRON Mmp2 EXON CR44070
3R	26435138	3R_26435138_DEL [dm3] 3R_30609416_DEL [dm6]	TGATTGTAGTC...	T	1.867e^-4	0.88	UTR_3_PRIME CG31016
2L	18552388	2L_18552388_SNP [dm3] 2L_18552388_SNP [dm6]	G	A	1.879e^-4	0.88	INTRON Pde11
2L	7688653	2L_7688653_SNP [dm3] 2L_7688653_SNP [dm6]	C	T	1.880e^-4	0.88	SYNONYMOUS_CODING Myo28B1 DOWNSTREAM CG18585
2R	20006439	2R_20006439_SNP [dm3] 2R_24118916_SNP [dm6]	G	T	1.886e^-4	0.88	INTRON CG3257	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
X	5202002	X_5202002_SNP [dm3] X_5307969_SNP [dm6]	G	A	1.886e^-4	0.88	SYNONYMOUS_CODING Cdk7 UPSTREAM CG17764	TF binding site mE1_TFBS_sens
2R	19000115	2R_19000115_SNP [dm3] 2R_23112592_SNP [dm6]	A	G	1.897e^-4	0.88	DOWNSTREAM CR44782 INTERGENIC
2R	12011233	2R_12011233_SNP [dm3] 2R_16123728_SNP [dm6]	A	C	1.898e^-4	0.88	DOWNSTREAM Jhe INTRON CG30095	TF binding site BDTNP1_TFBS_twi
2R	10541244	2R_10541244_SNP [dm3] 2R_14653739_SNP [dm6]	T	C	1.898e^-4	0.88	INTERGENIC
2L	15778669	2L_15778669_SNP [dm3] 2L_15778669_SNP [dm6]	C	T	1.905e^-4	0.88	INTERGENIC
X	14807735	X_14807735_SNP [dm3] X_14913702_SNP [dm6]	T	A	1.909e^-4	0.88	SYNONYMOUS_CODING CG12398 INTRON Flo2
X	20426686	X_20426686_INS [dm3] X_20555659_INS [dm6]	A	AGA	1.913e^-4	0.88	INTRON RunxB
2R	2144165	2R_2144165_SNP [dm3] 2R_6256660_SNP [dm6]	A	G	1.916e^-4	0.88	INTERGENIC	transposable element FlyBase
3R	22166171	3R_22166171_SNP [dm3] 3R_26340449_SNP [dm6]	T	A	1.924e^-4	0.88	INTRON CG33970
2R	7369930	2R_7369930_SNP [dm3] 2R_11482425_SNP [dm6]	G	T	1.924e^-4	0.88	INTRON inv
2L	177507	2L_177507_DEL [dm3] 2L_177507_DEL [dm6]	TGTGGAAATG	CC	1.926e^-4	0.88	INTRON spen
2L	11493150	2L_11493150_DEL [dm3] 2L_11493150_DEL [dm6]	ATCAA	A	1.930e^-4	0.88	INTERGENIC
2R	8732360	2R_8732360_SNP [dm3] 2R_12844855_SNP [dm6]	T	A	1.931e^-4	0.88	DOWNSTREAM CG17575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	12228554	2R_12228554_SNP [dm3] 2R_16341049_SNP [dm6]	G	A	1.948e^-4	0.88	UTR_3_PRIME Hmgs DOWNSTREAM CG7997
2R	12559224	2R_12559224_SNP [dm3] 2R_16671719_SNP [dm6]	A	T	1.951e^-4	0.88	UTR_3_PRIME CG34457 UPSTREAM CG34458
2R	20006886	2R_20006886_SNP [dm3] 2R_24119363_SNP [dm6]	G	A	1.952e^-4	0.88	INTRON CG3257	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
X	15203415	X_15203415_SNP [dm3] X_15309382_SNP [dm6]	G	A	1.953e^-4	0.88	INTRON gce
2L	661261	2L_661261_SNP [dm3] 2L_661261_SNP [dm6]	C	T	1.954e^-4	0.88	INTRON ds	TF binding site mE1_TFBS_HSA
2L	9624077	2L_9624077_SNP [dm3] 2L_9624077_SNP [dm6]	G	C	1.957e^-4	0.88	DOWNSTREAM GlcAT-S & 1 other INTERGENIC
2L	18082211	2L_18082211_SNP [dm3] 2L_18082211_SNP [dm6]	T	C	1.958e^-4	0.88	DOWNSTREAM Arr1 INTRON ninaD
2L	16306356	2L_16306356_SNP [dm3] 2L_16306356_SNP [dm6]	A	C	1.961e^-4	0.88	UPSTREAM Syx5 DOWNSTREAM c_2_M INTRON CG5861
3R	13489923	3R_13489923_SNP [dm3] 3R_17664201_SNP [dm6]	C	A	1.964e^-4	0.88	SYNONYMOUS_CODING CG14322	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	11189346	2L_11189346_SNP [dm3] 2L_11189346_SNP [dm6]	C	T	1.973e^-4	0.88	INTRON Ca-beta	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	4090253	3L_4090253_SNP [dm3] 3L_4090253_SNP [dm6]	A	T	1.973e^-4	0.88	INTRON CG14989	TF binding site mE1_TFBS_cad
3L	7424565	3L_7424565_SNP [dm3] 3L_7431465_SNP [dm6]	C	A	1.978e^-4	0.88	INTRON CG42458
2R	6748585	2R_6748585_SNP [dm3] 2R_10861080_SNP [dm6]	G	A	1.978e^-4	0.88	DOWNSTREAM CR44302 INTRON CG30015	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	13125947	X_13125947_SNP [dm3] X_13231914_SNP [dm6]	A	C	1.979e^-4	0.88	INTRON mew	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	7244005	2R_7244005_SNP [dm3] 2R_11356500_SNP [dm6]	T	G	1.982e^-4	0.88	UTR_5_PRIME CG13202 UPSTREAM iotaTry DOWNSTREAM deltaTry
2R	13933713	2R_13933713_SNP [dm3] 2R_18046208_SNP [dm6]	T	A	1.983e^-4	0.88	DOWNSTREAM CG5767 INTERGENIC
2L	15779370	2L_15779370_DEL [dm3] 2L_15779370_DEL [dm6]	TCAT	T	1.989e^-4	0.88	INTERGENIC
2L	11483022	2L_11483022_SNP [dm3] 2L_11483022_SNP [dm6]	A	C	1.996e^-4	0.88	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	12288788	3L_12288788_SNP [dm3] 3L_12295688_SNP [dm6]	A	G	2.000e^-4	0.88	INTRON CG4328
3R	7736689	3R_7736689_SNP [dm3] 3R_11910967_SNP [dm6]	C	T	2.000e^-4	0.88	INTRON Cad87A
2L	7938632	2L_7938632_INS [dm3] 2L_7938632_INS [dm6]	A	AT	2.011e^-4	0.883	INTRON Snoo
X	11354170	X_11354170_SNP [dm3] X_11460137_SNP [dm6]	G	T	2.019e^-4	0.884	DOWNSTREAM HP5 INTRON CG43155
2L	11481715	2L_11481715_SNP [dm3] 2L_11481715_SNP [dm6]	C	A	2.023e^-4	0.884	INTERGENIC
3R	3035987	3R_3035987_SNP [dm3] 3R_7210265_SNP [dm6]	C	T	2.036e^-4	0.885	INTERGENIC
3R	26435128	3R_26435128_DEL [dm3] 3R_30609406_DEL [dm6]	CG	T	2.038e^-4	0.885	UTR_3_PRIME CG31016
2L	12524901	2L_12524901_SNP [dm3] 2L_12524901_SNP [dm6]	A	T	2.044e^-4	0.885	INTRON bun
3R	24200726	3R_24200726_SNP [dm3] 3R_28375004_SNP [dm6]	G	A	2.048e^-4	0.885	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	17885767	2L_17885767_SNP [dm3] 2L_17885767_SNP [dm6]	C	T	2.052e^-4	0.885	INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	8541236	3L_8541236_SNP [dm3] 3L_8548136_SNP [dm6]	G	T	2.055e^-4	0.885	INTRON rhea	TF binding site mE1_TFBS_inv
2R	19628544	2R_19628544_SNP [dm3] 2R_23741021_SNP [dm6]	A	G	2.068e^-4	0.887	INTRON egl
2R	3578049	2R_3578049_SNP [dm3] 2R_7690544_SNP [dm6]	G	A	2.075e^-4	0.887	INTRON CG1399
2R	16696730	2R_16696730_SNP [dm3] 2R_20809225_SNP [dm6]	T	A	2.080e^-4	0.887	INTERGENIC
3R	25461515	3R_25461515_SNP [dm3] 3R_29635793_SNP [dm6]	C	T	2.095e^-4	0.887	INTRON Dop1R2
2R	9393105	2R_9393105_SNP [dm3] 2R_13505600_SNP [dm6]	C	T	2.095e^-4	0.887	SYNONYMOUS_CODING mars UPSTREAM mip120	TF binding site mE1_TFBS_chinmo
2L	7452674	2L_7452674_SNP [dm3] 2L_7452674_SNP [dm6]	C	T	2.098e^-4	0.887	INTRON Gr28a	TF binding site mE1_TFBS_HSA
2L	19819627	2L_19819627_SNP [dm3] 2L_19819627_SNP [dm6]	T	A	2.101e^-4	0.887	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn
X	14942378	X_14942378_SNP [dm3] X_15048345_SNP [dm6]	C	T	2.116e^-4	0.887	UPSTREAM CG5541 INTRON hiw & 1 other	transposable element FlyBase
3L	9740006	3L_9740006_SNP [dm3] 3L_9746906_SNP [dm6]	G	T	2.117e^-4	0.887	INTRON CG42268
X	15203346	X_15203346_SNP [dm3] X_15309313_SNP [dm6]	T	C	2.120e^-4	0.887	INTRON gce
2R	13856261	2R_13856261_SNP [dm3] 2R_17968756_SNP [dm6]	C	T	2.122e^-4	0.887	INTERGENIC
3L	3846897	3L_3846897_SNP [dm3] 3L_3846897_SNP [dm6]	C	G	2.123e^-4	0.887	INTRON Awh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_inv
3R	27104803	3R_27104803_SNP [dm3] 3R_31279081_SNP [dm6]	G	T	2.126e^-4	0.887	INTERGENIC
2L	18090023	2L_18090023_SNP [dm3] 2L_18090023_SNP [dm6]	T	C	2.147e^-4	0.887	DOWNSTREAM CG15153 INTERGENIC
3L	22620883	3L_22620883_SNP [dm3] 3L_22627783_SNP [dm6]	T	C	2.149e^-4	0.887	INTRON CG14459
3R	20309271	3R_20309271_SNP [dm3] 3R_24483549_SNP [dm6]	G	C	2.152e^-4	0.887	INTERGENIC
3L	5383424	3L_5383424_SNP [dm3] 3L_5390324_SNP [dm6]	A	T	2.156e^-4	0.887	INTERGENIC
2R	20008651	2R_20008651_SNP [dm3] 2R_24121128_SNP [dm6]	G	T	2.180e^-4	0.887	SYNONYMOUS_CODING CG3257	TF binding site BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3L	1152807	3L_1152807_INS [dm3] 3L_1152807_INS [dm6]	T	TTG	2.183e^-4	0.887	INTRON bab2	TF binding site mE1_TFBS_cad
2L	18036887	2L_18036887_SNP [dm3] 2L_18036887_SNP [dm6]	A	G	2.189e^-4	0.887	INTRON rdo
2R	9314998	2R_9314998_DEL [dm3] 2R_13427493_DEL [dm6]	GTATG	G	2.190e^-4	0.887	INTRON CG42321	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
X	14943770	X_14943770_SNP [dm3] X_15049737_SNP [dm6]	C	T	2.191e^-4	0.887	INTRON hiw & 1 other	TF binding site mE1_TFBS_inv
2L	20821532	2L_20821532_SNP [dm3] 2L_20821532_SNP [dm6]	G	T	2.192e^-4	0.887	UPSTREAM CheB38c INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
2L	19727228	2L_19727228_SNP [dm3] 2L_19727228_SNP [dm6]	G	A	2.192e^-4	0.887	SYNONYMOUS_CODING Lar
X	6440832	X_6440832_SNP [dm3] X_6546799_SNP [dm6]	G	A	2.193e^-4	0.887	INTRON CG34417	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	13167859	3L_13167859_SNP [dm3] 3L_13174759_SNP [dm6]	C	T	2.214e^-4	0.887	SYNONYMOUS_CODING snky
X	1282781	X_1282781_SNP [dm3] X_1388748_SNP [dm6]	T	C	2.216e^-4	0.887	UTR_5_PRIME CG32813 INTRON CG32813	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
3L	5355280	3L_5355280_SNP [dm3] 3L_5362180_SNP [dm6]	T	C	2.217e^-4	0.887	SYNONYMOUS_CODING CG4769 DOWNSTREAM Uev1A
3R	18480209	3R_18480209_SNP [dm3] 3R_22654487_SNP [dm6]	C	T	2.238e^-4	0.887	INTRON CG45058
3L	3020605	3L_3020605_INS [dm3] 3L_3020605_INS [dm6]	A	ACCA	2.239e^-4	0.887	INTERGENIC
3R	5042406	3R_5042406_SNP [dm3] 3R_9216684_SNP [dm6]	T	C	2.242e^-4	0.887	INTRON pum	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	9579502	3L_9579502_SNP [dm3] 3L_9586402_SNP [dm6]	G	A	2.257e^-4	0.887	INTRON CG42673	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	3527152	2L_3527152_SNP [dm3] 2L_3527152_SNP [dm6]	G	T	2.257e^-4	0.887	SYNONYMOUS_CODING CG8852 DOWNSTREAM Spindly	TF binding site mE1_TFBS_HSA
2R	16236281	2R_16236281_SNP [dm3] 2R_20348776_SNP [dm6]	C	T	2.264e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	14922974	X_14922974_SNP [dm3] X_15028941_SNP [dm6]	A	G	2.272e^-4	0.887	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	13920418	2L_13920418_SNP [dm3] 2L_13920418_SNP [dm6]	T	C	2.279e^-4	0.887	DOWNSTREAM CG16886 INTRON Ance-3	TF binding site mE1_TFBS_sbb
2R	17550363	2R_17550363_SNP [dm3] 2R_21662858_SNP [dm6]	T	A	2.284e^-4	0.887	START_GAINED pirk UTR_5_PRIME pirk UPSTREAM CR44748 & 1 other
3L	9579653	3L_9579653_SNP [dm3] 3L_9586553_SNP [dm6]	G	A	2.286e^-4	0.887	INTRON CG42673	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	18101882	2L_18101882_SNP [dm3] 2L_18101882_SNP [dm6]	C	G	2.290e^-4	0.887	INTERGENIC
3R	25804870	3R_25804870_SNP [dm3] 3R_29979148_SNP [dm6]	A	T	2.293e^-4	0.887	INTERGENIC	TF binding site mE1_TFBS_chinmo
3L	12288804	3L_12288804_SNP [dm3] 3L_12295704_SNP [dm6]	T	A	2.293e^-4	0.887	INTRON CG4328
3L	1368358	3L_1368358_SNP [dm3] 3L_1368358_SNP [dm6]	T	A	2.296e^-4	0.887	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	10715563	2R_10715563_SNP [dm3] 2R_14828058_SNP [dm6]	G	T	2.299e^-4	0.887	INTERGENIC
3L	10832598	3L_10832598_SNP [dm3] 3L_10839498_SNP [dm6]	A	C	2.303e^-4	0.887	INTERGENIC
2R	6562323	2R_6562323_SNP [dm3] 2R_10674818_SNP [dm6]	T	G	2.303e^-4	0.887	INTRON stan	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	209714	2R_209714_INS [dm3] 2R_4322209_INS [dm6]	T	TT	2.310e^-4	0.887	DOWNSTREAM Gprk1 INTERGENIC
3R	13670474	3R_13670474_SNP [dm3] 3R_17844752_SNP [dm6]	T	A	2.318e^-4	0.887	INTRON tinc
2L	20320390	2L_20320390_SNP [dm3] 2L_20320390_SNP [dm6]	T	A	2.318e^-4	0.887	INTRON spir
3R	20975466	3R_20975466_SNP [dm3] 3R_25149744_SNP [dm6]	C	T	2.319e^-4	0.887	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_eve mE1_TFBS_HSA
2R	18125483	2R_18125483_SNP [dm3] 2R_22237978_SNP [dm6]	A	G	2.321e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	10577470	2R_10577470_SNP [dm3] 2R_14689965_SNP [dm6]	G	A	2.325e^-4	0.887	INTRON mspo
2L	18968933	2L_18968933_SNP [dm3] 2L_18968933_SNP [dm6]	C	T	2.325e^-4	0.887	UPSTREAM Tango6 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3L	607828	3L_607828_SNP [dm3] 3L_607828_SNP [dm6]	C	T	2.338e^-4	0.887	INTERGENIC
3L	5568386	3L_5568386_SNP [dm3] 3L_5575286_SNP [dm6]	G	C	2.352e^-4	0.887	UPSTREAM Msr-110 INTRON Msr-110
2L	12949281	2L_12949281_SNP [dm3] 2L_12949281_SNP [dm6]	A	G	2.353e^-4	0.887	INTERGENIC
2L	940186	2L_940186_SNP [dm3] 2L_940186_SNP [dm6]	C	G	2.356e^-4	0.887	INTRON CG4341
2L	15207457	2L_15207457_SNP [dm3] 2L_15207457_SNP [dm6]	T	A	2.363e^-4	0.887	UPSTREAM CR44196 INTERGENIC
2R	19989181	2R_19989181_SNP [dm3] 2R_24101658_SNP [dm6]	C	A	2.364e^-4	0.887	SYNONYMOUS_CODING enok	TF binding site mE1_TFBS_cad
3R	8357927	3R_8357927_SNP [dm3] 3R_12532205_SNP [dm6]	T	C	2.373e^-4	0.887	INTRON Octbeta3R
3R	26435185	3R_26435185_SNP [dm3] 3R_30609463_SNP [dm6]	T	C	2.383e^-4	0.887	UTR_3_PRIME CG31016
3R	7786918	3R_7786918_SNP [dm3] 3R_11961196_SNP [dm6]	A	T	2.383e^-4	0.887	SYNONYMOUS_CODING CG3281 DOWNSTREAM Hsp70Ab	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	17170770	2R_17170770_SNP [dm3] 2R_21283265_SNP [dm6]	G	T	2.385e^-4	0.887	INTRON MFS16	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	4156186	3L_4156186_SNP [dm3] 3L_4156186_SNP [dm6]	A	G	2.387e^-4	0.887	INTRON nab	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	6786728	2R_6786728_DEL [dm3] 2R_10899223_DEL [dm6]	CCCTTTTAACGCGGCAGCTT...	A	2.388e^-4	0.887	UPSTREAM Rpb5 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_jumu
3R	6827738	3R_6827738_SNP [dm3] 3R_11002016_SNP [dm6]	A	C	2.398e^-4	0.887	INTRON CG34114
3R	13417639	3R_13417639_SNP [dm3] 3R_17591917_SNP [dm6]	G	T	2.408e^-4	0.887	INTERGENIC
3R	19926658	3R_19926658_SNP [dm3] 3R_24100936_SNP [dm6]	C	A	2.409e^-4	0.887	DOWNSTREAM Syx1A INTRON 4EHP
3L	5233011	3L_5233011_SNP [dm3] 3L_5239911_SNP [dm6]	T	G	2.411e^-4	0.887	INTRON shep
2L	5624054	2L_5624054_SNP [dm3] 2L_5624054_SNP [dm6]	C	A	2.412e^-4	0.887	UPSTREAM Cyp6a16 INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3R	5247455	3R_5247455_SNP [dm3] 3R_9421733_SNP [dm6]	C	G	2.420e^-4	0.887	INTRON ps
2L	18081416	2L_18081416_SNP [dm3] 2L_18081416_SNP [dm6]	C	T	2.422e^-4	0.887	UPSTREAM ninaD DOWNSTREAM Arr1 INTERGENIC
2R	7475005	2R_7475005_SNP [dm3] 2R_11587500_SNP [dm6]	G	C	2.422e^-4	0.887	DOWNSTREAM snoRNA:Psi28S-1936 INTRON tou
2R	4715764	2R_4715764_SNP [dm3] 2R_8828259_SNP [dm6]	G	T	2.424e^-4	0.887	DOWNSTREAM CG30350 INTRON sns	TF binding site mE1_TFBS_chinmo
3R	11277608	3R_11277608_SNP [dm3] 3R_15451886_SNP [dm6]	C	A	2.432e^-4	0.887	INTRON AdamTS-A
2L	11255358	2L_11255358_SNP [dm3] 2L_11255358_SNP [dm6]	A	C	2.437e^-4	0.887	INTRON ab	TF binding site mE1_TFBS_cad
2R	12011049	2R_12011049_SNP [dm3] 2R_16123544_SNP [dm6]	T	A	2.452e^-4	0.887	NON_SYNONYMOUS_CODING CG30095 DOWNSTREAM Jhe	TF binding site BDTNP1_TFBS_twi
3L	7027538	3L_7027538_SNP [dm3] 3L_7034438_SNP [dm6]	A	C	2.454e^-4	0.887	INTRON Mp
3L	8028031	3L_8028031_SNP [dm3] 3L_8034931_SNP [dm6]	A	C	2.457e^-4	0.887	INTRON nmo	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_Trl
3L	15652904	3L_15652904_DEL [dm3] 3L_15659804_DEL [dm6]	AA	A	2.460e^-4	0.887	UPSTREAM Eig71Eh DOWNSTREAM Eig71Ej INTRON Eig71Ei
2R	16236285	2R_16236285_SNP [dm3] 2R_20348780_SNP [dm6]	A	T	2.465e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	6076030	2R_6076030_SNP [dm3] 2R_10188525_SNP [dm6]	C	T	2.466e^-4	0.887	INTRON KCNQ
3L	3844461	3L_3844461_SNP [dm3] 3L_3844461_SNP [dm6]	C	A	2.475e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
3L	4257205	3L_4257205_SNP [dm3] 3L_4257205_SNP [dm6]	G	C	2.483e^-4	0.887	NON_SYNONYMOUS_CODING CG15011
3L	3844447	3L_3844447_SNP [dm3] 3L_3844447_SNP [dm6]	C	T	2.484e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
3L	3844451	3L_3844451_SNP [dm3] 3L_3844451_SNP [dm6]	A	T	2.484e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
3L	3844467	3L_3844467_DEL [dm3] 3L_3844467_DEL [dm6]	GCTTGAAGC	T	2.484e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
3L	3844496	3L_3844496_SNP [dm3] 3L_3844496_SNP [dm6]	G	T	2.484e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
3L	718909	3L_718909_SNP [dm3] 3L_718909_SNP [dm6]	G	A	2.484e^-4	0.887	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	1207585	2L_1207585_SNP [dm3] 2L_1207585_SNP [dm6]	T	C	2.493e^-4	0.887	INTERGENIC
2L	940210	2L_940210_SNP [dm3] 2L_940210_SNP [dm6]	T	C	2.494e^-4	0.887	INTRON CG4341
2R	12558545	2R_12558545_INS [dm3] 2R_16671040_INS [dm6]	C	CCACATTGAATAGATTGGAA...	2.495e^-4	0.887	UPSTREAM CG34458
X	8427772	X_8427772_SNP [dm3] X_8533739_SNP [dm6]	A	T	2.495e^-4	0.887	INTRON Nrg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	9778131	2R_9778131_SNP [dm3] 2R_13890626_SNP [dm6]	T	C	2.505e^-4	0.889	SYNONYMOUS_CODING shot INTRON shot	TF binding site mE1_TFBS_sens
2L	11481796	2L_11481796_SNP [dm3] 2L_11481796_SNP [dm6]	G	A	2.515e^-4	0.89	INTERGENIC
3R	23917910	3R_23917910_SNP [dm3] 3R_28092188_SNP [dm6]	A	G	2.519e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_inv
2R	12510156	2R_12510156_SNP [dm3] 2R_16622651_SNP [dm6]	T	C	2.523e^-4	0.89	SPLICE_SITE_REGION CG5065 INTRON CG5065	TF binding site mE1_TFBS_cad
2L	17365564	2L_17365564_SNP [dm3] 2L_17365564_SNP [dm6]	T	C	2.532e^-4	0.89	INTERGENIC
3L	12288778	3L_12288778_SNP [dm3] 3L_12295678_SNP [dm6]	G	C	2.540e^-4	0.89	INTRON CG4328
2R	7244028	2R_7244028_SNP [dm3] 2R_11356523_SNP [dm6]	T	C	2.569e^-4	0.89	START_GAINED CG13202 UTR_5_PRIME CG13202 UPSTREAM iotaTry DOWNSTREAM deltaTry
2R	13154272	2R_13154272_SNP [dm3] 2R_17266767_SNP [dm6]	T	A	2.569e^-4	0.89	INTRON mbl	TF binding site BDTNP1_TFBS_z
2L	20807593	2L_20807593_SNP [dm3] 2L_20807593_SNP [dm6]	T	C	2.577e^-4	0.89	INTRON CG9328
3L	7097770	3L_7097770_SNP [dm3] 3L_7104670_SNP [dm6]	G	C	2.581e^-4	0.89	INTRON form3
2R	13774098	2R_13774098_SNP [dm3] 2R_17886593_SNP [dm6]	T	C	2.584e^-4	0.89	DOWNSTREAM PPO1 INTRON Elk
X	15206277	X_15206277_SNP [dm3] X_15312244_SNP [dm6]	C	T	2.584e^-4	0.89	INTRON gce
2L	11426331	2L_11426331_SNP [dm3] 2L_11426331_SNP [dm6]	C	G	2.606e^-4	0.89	INTERGENIC
2L	13318116	2L_13318116_SNP [dm3] 2L_13318116_SNP [dm6]	G	T	2.606e^-4	0.89	INTRON CG43778
2R	4465001	2R_4465001_SNP [dm3] 2R_8577496_SNP [dm6]	A	G	2.606e^-4	0.89	INTRON CG42326	TF binding site mE1_TFBS_cad
3L	3844456	3L_3844456_SNP [dm3] 3L_3844456_SNP [dm6]	G	C	2.607e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
3L	8541160	3L_8541160_SNP [dm3] 3L_8548060_SNP [dm6]	A	T	2.611e^-4	0.89	INTRON rhea	TF binding site mE1_TFBS_inv mE1_TFBS_Trl
2R	6866368	2R_6866368_SNP [dm3] 2R_10978863_SNP [dm6]	T	A	2.613e^-4	0.89	UTR_3_PRIME luna
2L	17058447	2L_17058447_SNP [dm3] 2L_17058447_SNP [dm6]	A	C	2.624e^-4	0.89	INTERGENIC
X	14927245	X_14927245_SNP [dm3] X_15033212_SNP [dm6]	T	C	2.627e^-4	0.89	UTR_3_PRIME be INTRON hiw & 1 other
3R	6820940	3R_6820940_SNP [dm3] 3R_10995218_SNP [dm6]	C	T	2.639e^-4	0.89	INTRON CG34114
2R	13506837	2R_13506837_SNP [dm3] 2R_17619332_SNP [dm6]	C	A	2.651e^-4	0.89	INTRON CG10936
2L	12913321	2L_12913321_SNP [dm3] 2L_12913321_SNP [dm6]	G	C	2.652e^-4	0.89	SYNONYMOUS_CODING ACXC
2L	18070169	2L_18070169_SNP [dm3] 2L_18070169_SNP [dm6]	T	A	2.660e^-4	0.89	UTR_3_PRIME rdo
3L	9579266	3L_9579266_SNP [dm3] 3L_9586166_SNP [dm6]	T	G	2.672e^-4	0.89	INTRON CG42673
2L	20629354	2L_20629354_SNP [dm3] 2L_20629354_SNP [dm6]	A	T	2.676e^-4	0.89	INTERGENIC
2R	7065064	2R_7065064_SNP [dm3] 2R_11177559_SNP [dm6]	T	C	2.690e^-4	0.89	INTRON shn
X	7882019	X_7882019_SNP [dm3] X_7987986_SNP [dm6]	C	T	2.695e^-4	0.89	INTERGENIC
2L	7780363	2L_7780363_SNP [dm3] 2L_7780363_SNP [dm6]	C	T	2.696e^-4	0.89	SYNONYMOUS_CODING Uro
2L	5616073	2L_5616073_SNP [dm3] 2L_5616073_SNP [dm6]	C	A	2.700e^-4	0.89	DOWNSTREAM CR44795 INTRON CG14010	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi
2L	14277370	2L_14277370_SNP [dm3] 2L_14277370_SNP [dm6]	G	A	2.701e^-4	0.89	UTR_5_PRIME CG32971 INTRON wb
2L	11050364	2L_11050364_SNP [dm3] 2L_11050364_SNP [dm6]	T	C	2.702e^-4	0.89	INTRON Samuel	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	18458281	3R_18458281_SNP [dm3] 3R_22632559_SNP [dm6]	T	C	2.710e^-4	0.89	INTRON loco	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	7124015	3L_7124015_SNP [dm3] 3L_7130915_SNP [dm6]	T	C	2.716e^-4	0.89	UPSTREAM CG8628 & 1 other INTRON CG8628
2L	562025	2L_562025_SNP [dm3] 2L_562025_SNP [dm6]	A	G	2.717e^-4	0.89	NON_SYNONYMOUS_CODING CG11835	TF binding site mE1_TFBS_chinmo
2L	10616094	2L_10616094_SNP [dm3] 2L_10616094_SNP [dm6]	C	A	2.724e^-4	0.89	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2L	20808496	2L_20808496_SNP [dm3] 2L_20808496_SNP [dm6]	T	C	2.724e^-4	0.89	INTRON CG9328
3R	5234298	3R_5234298_SNP [dm3] 3R_9408576_SNP [dm6]	G	A	2.732e^-4	0.89	UTR_3_PRIME betaTub85D UPSTREAM CG44261 DOWNSTREAM CG8135 & 1 other	TF binding site mE1_TFBS_cad
3R	22021935	3R_22021935_SNP [dm3] 3R_26196213_SNP [dm6]	A	T	2.733e^-4	0.89	INTRON CR44320
3L	3844459	3L_3844459_SNP [dm3] 3L_3844459_SNP [dm6]	A	T	2.738e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
2R	9120843	2R_9120843_SNP [dm3] 2R_13233338_SNP [dm6]	A	G	2.740e^-4	0.89	INTRON CG4670	TF binding site mE1_TFBS_cad
3L	9579703	3L_9579703_SNP [dm3] 3L_9586603_SNP [dm6]	T	G	2.741e^-4	0.89	INTRON CG42673
X	7233918	X_7233918_SNP [dm3] X_7339885_SNP [dm6]	C	G	2.749e^-4	0.89	INTRON CR44357 & 2 others	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
X	9008323	X_9008323_SNP [dm3] X_9114290_SNP [dm6]	A	C	2.765e^-4	0.89	SYNONYMOUS_CODING AP-1gamma
3L	10632037	3L_10632037_SNP [dm3] 3L_10638937_SNP [dm6]	T	G	2.775e^-4	0.89	UPSTREAM E_z_ & 1 other INTRON CG8009
3R	24338493	3R_24338493_SNP [dm3] 3R_28512771_SNP [dm6]	C	T	2.794e^-4	0.89	INTRON Dhc98D
2L	6902654	2L_6902654_SNP [dm3] 2L_6902654_SNP [dm6]	G	T	2.794e^-4	0.89	DOWNSTREAM mir-932 INTRON Nlg2
2L	3692704	2L_3692704_SNP [dm3] 2L_3692704_SNP [dm6]	T	A	2.797e^-4	0.89	UTR_3_PRIME CG3513 UPSTREAM CG16704 DOWNSTREAM CG34340 & 1 other
2R	6882691	2R_6882691_INS [dm3] 2R_10995186_INS [dm6]	G	GG	2.800e^-4	0.89	INTRON luna	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	516212	2L_516212_SNP [dm3] 2L_516212_SNP [dm6]	G	C	2.804e^-4	0.89	INTRON ush	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	9103364	X_9103364_SNP [dm3] X_9209331_SNP [dm6]	G	A	2.804e^-4	0.89	INTRON CG12119
3L	18536066	3L_18536066_SNP [dm3] 3L_18542966_SNP [dm6]	A	T	2.811e^-4	0.89	INTERGENIC
X	10716102	X_10716102_SNP [dm3] X_10822069_SNP [dm6]	A	G	2.825e^-4	0.89	UPSTREAM Imp INTRON Imp	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_sens mE1_TFBS_Trl
3R	5653934	3R_5653934_SNP [dm3] 3R_9828212_SNP [dm6]	T	C	2.830e^-4	0.89	UTR_3_PRIME Teh1
2L	8745170	2L_8745170_SNP [dm3] 2L_8745170_SNP [dm6]	G	T	2.833e^-4	0.89	INTERGENIC
3R	17636771	3R_17636771_INS [dm3] 3R_21811049_INS [dm6]	A	AA	2.835e^-4	0.89	INTRON CASK
2R	13778239	2R_13778239_SNP [dm3] 2R_17890734_SNP [dm6]	A	T	2.836e^-4	0.89	UPSTREAM PPO1 INTRON Elk
2R	10366370	2R_10366370_SNP [dm3] 2R_14478865_SNP [dm6]	T	C	2.838e^-4	0.89	DOWNSTREAM CR44462 INTERGENIC	TF binding site mE1_TFBS_cad
2R	18610843	2R_18610843_SNP [dm3] 2R_22723338_SNP [dm6]	G	T	2.844e^-4	0.89	INTRON jbug	TF binding site mE1_TFBS_cad mE1_TFBS_inv
3R	22198657	3R_22198657_SNP [dm3] 3R_26372935_SNP [dm6]	T	A	2.854e^-4	0.89	INTERGENIC
3L	22650598	3L_22650598_DEL [dm3] 3L_22657498_DEL [dm6]	ATTCATTCATTT...	A	2.862e^-4	0.89	INTERGENIC
3R	21333675	3R_21333675_SNP [dm3] 3R_25507953_SNP [dm6]	A	G	2.865e^-4	0.89	SYNONYMOUS_CODING CG5111	TF binding site mE1_TFBS_inv
2R	14516534	2R_14516534_SNP [dm3] 2R_18629029_SNP [dm6]	A	C	2.866e^-4	0.89	SYNONYMOUS_CODING Eip55E DOWNSTREAM CG5482	TF binding site mE1_TFBS_sens
3R	4749174	3R_4749174_SNP [dm3] 3R_8923452_SNP [dm6]	T	G	2.869e^-4	0.89	INTRON pyd
X	18110218	X_18110218_SNP [dm3] X_18216185_SNP [dm6]	C	A	2.877e^-4	0.89	INTRON CG33639
2L	4288434	2L_4288434_SNP [dm3] 2L_4288434_SNP [dm6]	T	A	2.877e^-4	0.89	INTRON tutl	TF binding site mE1_TFBS_cad
X	6440775	X_6440775_SNP [dm3] X_6546742_SNP [dm6]	C	T	2.881e^-4	0.89	INTRON CG34417	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	4257151	3L_4257151_SNP [dm3] 3L_4257151_SNP [dm6]	C	G	2.882e^-4	0.89	SYNONYMOUS_CODING CG15011
2R	1071932	2R_1071932_SNP [dm3] 2R_5184427_SNP [dm6]	G	A	2.887e^-4	0.89	SYNONYMOUS_CODING Nipped-A	TF binding site mE1_TFBS_zfh1
3L	4024167	3L_4024167_SNP [dm3] 3L_4024167_SNP [dm6]	G	A	2.887e^-4	0.89	SYNONYMOUS_CODING CG11594	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	5379385	X_5379385_INS [dm3] X_5485352_INS [dm6]	T	TT	2.890e^-4	0.89	INTRON SPR
3R	20823951	3R_20823951_SNP [dm3] 3R_24998229_SNP [dm6]	C	G	2.895e^-4	0.89	INTRON tnc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7122722	3L_7122722_SNP [dm3] 3L_7129622_SNP [dm6]	G	C	2.900e^-4	0.89	UTR_3_PRIME CG15829 DOWNSTREAM CG15829
2L	11426340	2L_11426340_INS [dm3] 2L_11426340_INS [dm6]	T	TTCGATTTGCTA...	2.906e^-4	0.89	INTERGENIC
3R	7299892	3R_7299892_SNP [dm3] 3R_11474170_SNP [dm6]	T	C	2.911e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	22650624	3L_22650624_SNP [dm3] 3L_22657524_SNP [dm6]	A	G	2.918e^-4	0.89	INTERGENIC
2L	10616057	2L_10616057_SNP [dm3] 2L_10616057_SNP [dm6]	A	T	2.928e^-4	0.89	INTRON Trim9	TF binding site BDTNP1_TFBS_twi
2R	16612671	2R_16612671_SNP [dm3] 2R_20725166_SNP [dm6]	A	G	2.931e^-4	0.89	INTRON dpr
2R	9392388	2R_9392388_SNP [dm3] 2R_13504883_SNP [dm6]	C	T	2.932e^-4	0.89	SYNONYMOUS_CODING mars	TF binding site mE1_TFBS_sens
2R	6018522	2R_6018522_SNP [dm3] 2R_10131017_SNP [dm6]	C	A	2.933e^-4	0.89	INTRON gem	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	4894698	X_4894698_SNP [dm3] X_5000665_SNP [dm6]	C	T	2.941e^-4	0.89	INTRON CR44833	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	9628506	3L_9628506_SNP [dm3] 3L_9635406_SNP [dm6]	T	C	2.944e^-4	0.89	INTRON fry
3R	8379448	3R_8379448_SNP [dm3] 3R_12553726_SNP [dm6]	T	A	2.984e^-4	0.89	INTRON Octbeta2R
2L	18073122	2L_18073122_SNP [dm3] 2L_18073122_SNP [dm6]	G	C	2.984e^-4	0.89	INTERGENIC
2L	18065420	2L_18065420_SNP [dm3] 2L_18065420_SNP [dm6]	A	G	2.985e^-4	0.89	SYNONYMOUS_CODING rdo
2L	7770443	2L_7770443_SNP [dm3] 2L_7770443_SNP [dm6]	C	G	2.985e^-4	0.89	INTRON CG7191
2R	3748869	2R_3748869_SNP [dm3] 2R_7861364_SNP [dm6]	A	G	2.996e^-4	0.89	INTRON Dgk
2R	18797299	2R_18797299_DEL [dm3] 2R_22909776_DEL [dm6]	AAAAGT	A	3.000e^-4	0.89	INTRON nahoda
2R	18797308	2R_18797308_DEL [dm3] 2R_22909785_DEL [dm6]	ACTCC	A	3.000e^-4	0.89	INTRON nahoda
2R	8733100	2R_8733100_SNP [dm3] 2R_12845595_SNP [dm6]	T	C	3.002e^-4	0.89	UTR_3_PRIME CG17575 DOWNSTREAM Or49b	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	8513934	X_8513934_SNP [dm3] X_8619901_SNP [dm6]	A	G	3.006e^-4	0.89	INTERGENIC
2L	5615726	2L_5615726_SNP [dm3] 2L_5615726_SNP [dm6]	A	G	3.031e^-4	0.89	DOWNSTREAM CR44795 INTRON CG14010	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
2L	4044715	2L_4044715_SNP [dm3] 2L_4044715_SNP [dm6]	C	A	3.038e^-4	0.89	INTRON ed	TF binding site BDTNP1_TFBS_dl
2R	5383777	2R_5383777_SNP [dm3] 2R_9496272_SNP [dm6]	C	T	3.038e^-4	0.89	INTRON Wnt2
3R	18564287	3R_18564287_SNP [dm3] 3R_22738565_SNP [dm6]	C	A	3.041e^-4	0.89	SYNONYMOUS_CODING Dcr-1	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_inv
3L	2049646	3L_2049646_SNP [dm3] 3L_2049646_SNP [dm6]	A	C	3.043e^-4	0.89	SYNONYMOUS_CODING sls	TF binding site mE1_TFBS_sens
3L	9615850	3L_9615850_SNP [dm3] 3L_9622750_SNP [dm6]	G	A	3.048e^-4	0.89	SYNONYMOUS_CODING LanB2	TF binding site mE1_TFBS_cad
3L	14978748	3L_14978748_SNP [dm3] 3L_14985648_SNP [dm6]	A	C	3.052e^-4	0.89	INTRON mnd	TF binding site mE1_TFBS_cad mE1_TFBS_Kr
2R	8412432	2R_8412432_SNP [dm3] 2R_12524927_SNP [dm6]	G	T	3.059e^-4	0.89	INTERGENIC
3R	9128755	3R_9128755_SNP [dm3] 3R_13303033_SNP [dm6]	C	G	3.062e^-4	0.89	SYNONYMOUS_CODING CG32473 UPSTREAM CG43208 DOWNSTREAM CG8774
2L	17712833	2L_17712833_SNP [dm3] 2L_17712833_SNP [dm6]	T	G	3.066e^-4	0.89	INTRON CadN
3R	5241212	3R_5241212_SNP [dm3] 3R_9415490_SNP [dm6]	C	T	3.076e^-4	0.89	SYNONYMOUS_CODING alpha-Man-II	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	2506360	3L_2506360_SNP [dm3] 3L_2506360_SNP [dm6]	C	T	3.083e^-4	0.89	UTR_3_PRIME Spn DOWNSTREAM Spn
2R	13355911	2R_13355911_SNP [dm3] 2R_17468406_SNP [dm6]	C	T	3.083e^-4	0.89	NON_SYNONYMOUS_CODING Tes	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	16429986	2L_16429986_SNP [dm3] 2L_16429986_SNP [dm6]	A	C	3.091e^-4	0.89	INTRON CG5888
2R	6967009	2R_6967009_SNP [dm3] 2R_11079504_SNP [dm6]	G	T	3.095e^-4	0.89	INTRON luna
2L	19819659	2L_19819659_SNP [dm3] 2L_19819659_SNP [dm6]	A	T	3.096e^-4	0.89	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3L	2730998	3L_2730998_SNP [dm3] 3L_2730998_SNP [dm6]	C	A	3.099e^-4	0.89	INTRON Mrtf
2L	8830932	2L_8830932_SNP [dm3] 2L_8830932_SNP [dm6]	G	T	3.101e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	20808486	2L_20808486_SNP [dm3] 2L_20808486_SNP [dm6]	T	C	3.108e^-4	0.89	INTRON CG9328
3L	7983165	3L_7983165_SNP [dm3] 3L_7990065_SNP [dm6]	G	A	3.109e^-4	0.89	INTRON nmo
3R	22198613	3R_22198613_SNP [dm3] 3R_26372891_SNP [dm6]	A	G	3.116e^-4	0.89	INTERGENIC
3L	1714405	3L_1714405_SNP [dm3] 3L_1714405_SNP [dm6]	C	T	3.128e^-4	0.89	SYNONYMOUS_CODING CG7991	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	6842125	3R_6842125_SNP [dm3] 3R_11016403_SNP [dm6]	G	T	3.144e^-4	0.89	INTRON CG34114
X	19194174	X_19194174_SNP [dm3] X_19300141_SNP [dm6]	T	G	3.145e^-4	0.89	INTERGENIC
3L	9627416	3L_9627416_SNP [dm3] 3L_9634316_SNP [dm6]	C	T	3.146e^-4	0.89	INTRON fry
3L	18370207	3L_18370207_SNP [dm3] 3L_18377107_SNP [dm6]	A	C	3.147e^-4	0.89	INTERGENIC
3L	18363142	3L_18363142_SNP [dm3] 3L_18370042_SNP [dm6]	G	A	3.148e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_Kr
2L	13629661	2L_13629661_SNP [dm3] 2L_13629661_SNP [dm6]	A	G	3.151e^-4	0.89	INTRON kuz
2L	19723559	2L_19723559_SNP [dm3] 2L_19723559_SNP [dm6]	C	G	3.171e^-4	0.89	INTRON Lar
2R	9939852	2R_9939852_SNP [dm3] 2R_14052347_SNP [dm6]	A	G	3.172e^-4	0.89	INTRON mam
2R	6797676	2R_6797676_SNP [dm3] 2R_10910171_SNP [dm6]	T	C	3.183e^-4	0.89	SYNONYMOUS_CODING Obp47a
2R	13806108	2R_13806108_SNP [dm3] 2R_17918603_SNP [dm6]	G	T	3.184e^-4	0.89	INTRON Elk
3L	1671588	3L_1671588_SNP [dm3] 3L_1671588_SNP [dm6]	G	A	3.191e^-4	0.89	SYNONYMOUS_CODING CG13930	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	4979632	3L_4979632_SNP [dm3] 3L_4979632_SNP [dm6]	A	G	3.195e^-4	0.89	DOWNSTREAM CG17030 INTRON Con	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	9118617	2R_9118617_SNP [dm3] 2R_13231112_SNP [dm6]	T	C	3.199e^-4	0.89	SYNONYMOUS_CODING fsd UPSTREAM Pex13 DOWNSTREAM CG4670	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	5383375	3L_5383375_SNP [dm3] 3L_5390275_SNP [dm6]	T	A	3.206e^-4	0.89	INTERGENIC
2L	16994119	2L_16994119_SNP [dm3] 2L_16994119_SNP [dm6]	C	G	3.215e^-4	0.89	DOWNSTREAM beat-IIIb INTERGENIC
2L	11483985	2L_11483985_SNP [dm3] 2L_11483985_SNP [dm6]	G	T	3.217e^-4	0.89	UPSTREAM CG43355 & 1 other INTERGENIC
3L	9579488	3L_9579488_SNP [dm3] 3L_9586388_SNP [dm6]	A	G	3.218e^-4	0.89	INTRON CG42673	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	11374277	2L_11374277_SNP [dm3] 2L_11374277_SNP [dm6]	G	A	3.219e^-4	0.89	DOWNSTREAM salr INTERGENIC
3R	5822218	3R_5822218_SNP [dm3] 3R_9996496_SNP [dm6]	T	C	3.226e^-4	0.89	SYNONYMOUS_CODING Gr85a UPSTREAM Spn85F	TF binding site mE1_TFBS_sens
2R	17550693	2R_17550693_SNP [dm3] 2R_21663188_SNP [dm6]	A	G	3.235e^-4	0.89	UPSTREAM pirk & 2 others EXON CR44748
X	16005448	X_16005448_DEL [dm3] X_16111415_DEL [dm6]	GGCTAAGACATG...	G	3.238e^-4	0.89	INTERGENIC
3L	4192137	3L_4192137_DEL [dm3] 3L_4192137_DEL [dm6]	GGATTTAACCATG...	G	3.243e^-4	0.89	INTRON CG18675 & 1 other
2R	6050170	2R_6050170_SNP [dm3] 2R_10162665_SNP [dm6]	A	C	3.245e^-4	0.89	INTRON KCNQ
3L	6445235	3L_6445235_SNP [dm3] 3L_6452135_SNP [dm6]	C	A	3.253e^-4	0.89	INTRON CG42747
2L	11189407	2L_11189407_SNP [dm3] 2L_11189407_SNP [dm6]	T	C	3.256e^-4	0.89	INTRON Ca-beta	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	18085913	2L_18085913_SNP [dm3] 2L_18085913_SNP [dm6]	G	A	3.257e^-4	0.89	NON_SYNONYMOUS_CODING CG31741
3R	18480919	3R_18480919_SNP [dm3] 3R_22655197_SNP [dm6]	T	G	3.263e^-4	0.89	INTRON CG45058
2L	831658	2L_831658_SNP [dm3] 2L_831658_SNP [dm6]	C	T	3.265e^-4	0.89	INTRON dock	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	19961636	3L_19961636_SNP [dm3] 3L_19968536_SNP [dm6]	C	A	3.266e^-4	0.89	INTRON Ac76E
2R	15060864	2R_15060864_SNP [dm3] 2R_19173359_SNP [dm6]	C	T	3.267e^-4	0.89	INTRON CG10737
2R	14516558	2R_14516558_SNP [dm3] 2R_18629053_SNP [dm6]	A	G	3.292e^-4	0.89	SYNONYMOUS_CODING Eip55E DOWNSTREAM CG5482
2R	16610988	2R_16610988_SNP [dm3] 2R_20723483_SNP [dm6]	T	C	3.305e^-4	0.89	DOWNSTREAM CR44660 INTRON dpr
3L	10981279	3L_10981279_SNP [dm3] 3L_10988179_SNP [dm6]	A	G	3.307e^-4	0.89	INTRON klu
2L	516203	2L_516203_DEL [dm3] 2L_516203_DEL [dm6]	CC	C	3.316e^-4	0.89	INTRON ush	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	21508017	X_21508017_SNP [dm3] X_21636990_SNP [dm6]	C	T	3.322e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	19526475	3R_19526475_SNP [dm3] 3R_23700753_SNP [dm6]	C	T	3.326e^-4	0.89	UPSTREAM CG31468 INTRON CG31148
3L	3948191	3L_3948191_SNP [dm3] 3L_3948191_SNP [dm6]	T	C	3.326e^-4	0.89	SYNONYMOUS_CODING CG10853 DOWNSTREAM CG14982 & 1 other
X	4894696	X_4894696_INS [dm3] X_5000663_INS [dm6]	A	AAT	3.333e^-4	0.89	INTRON CR44833	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	601116	3L_601116_SNP [dm3] 3L_601116_SNP [dm6]	T	C	3.334e^-4	0.89	INTRON CG13893	TF binding site mE1_TFBS_inv
3R	8138308	3R_8138308_SNP [dm3] 3R_12312586_SNP [dm6]	C	A	3.336e^-4	0.89	NON_SYNONYMOUS_CODING CG4066	TF binding site mE1_TFBS_sens
3L	2505425	3L_2505425_SNP [dm3] 3L_2505425_SNP [dm6]	A	T	3.338e^-4	0.89	UTR_3_PRIME Spn	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	8891316	X_8891316_DEL [dm3] X_8997283_DEL [dm6]	TAT	T	3.339e^-4	0.89	INTRON rdgA & 1 other
3L	9579513	3L_9579513_SNP [dm3] 3L_9586413_SNP [dm6]	C	A	3.343e^-4	0.89	INTRON CG42673	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	11321514	2R_11321514_SNP [dm3] 2R_15434009_SNP [dm6]	C	A	3.347e^-4	0.89	INTRON CG43729
3L	9746590	3L_9746590_SNP [dm3] 3L_9753490_SNP [dm6]	A	T	3.348e^-4	0.89	INTRON CG42268
2L	12967089	2L_12967089_SNP [dm3] 2L_12967089_SNP [dm6]	A	T	3.349e^-4	0.89	INTRON CG16800
2L	12967158	2L_12967158_SNP [dm3] 2L_12967158_SNP [dm6]	A	G	3.349e^-4	0.89	SYNONYMOUS_CODING CG16800
X	14921951	X_14921951_MNP [dm3] X_15027918_MNP [dm6]	GTA	TAC	3.356e^-4	0.89	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	3803698	3L_3803698_SNP [dm3] 3L_3803698_SNP [dm6]	C	T	3.363e^-4	0.89	DOWNSTREAM ntc INTRON CG32264
2L	1847067	2L_1847067_SNP [dm3] 2L_1847067_SNP [dm6]	T	C	3.364e^-4	0.89	INTRON wry
X	14148739	X_14148739_DEL [dm3] X_14254706_DEL [dm6]	CAGA	C	3.367e^-4	0.89	INTRON mud
2R	18466121	2R_18466121_SNP [dm3] 2R_22578616_SNP [dm6]	C	G	3.381e^-4	0.89	INTRON dnr1	TF binding site mE1_TFBS_chinmo
2R	15966789	2R_15966789_SNP [dm3] 2R_20079284_SNP [dm6]	G	A	3.389e^-4	0.89	INTERGENIC
2R	15966796	2R_15966796_SNP [dm3] 2R_20079291_SNP [dm6]	T	A	3.389e^-4	0.89	INTERGENIC
2L	18079463	2L_18079463_SNP [dm3] 2L_18079463_SNP [dm6]	G	A	3.390e^-4	0.89	SYNONYMOUS_CODING Arr1	TF binding site mE1_TFBS_chinmo
3L	3688857	3L_3688857_SNP [dm3] 3L_3688857_SNP [dm6]	A	G	3.393e^-4	0.89	EXON CR43484
2R	13807173	2R_13807173_SNP [dm3] 2R_17919668_SNP [dm6]	G	A	3.394e^-4	0.89	INTRON Elk
3L	3871714	3L_3871714_SNP [dm3] 3L_3871714_SNP [dm6]	A	G	3.399e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2L	20814085	2L_20814085_SNP [dm3] 2L_20814085_SNP [dm6]	T	C	3.403e^-4	0.89	UTR_3_PRIME CG9328 DOWNSTREAM CG33322 & 1 other
2R	13799437	2R_13799437_SNP [dm3] 2R_17911932_SNP [dm6]	C	G	3.403e^-4	0.89	INTRON Elk
2R	7476596	2R_7476596_SNP [dm3] 2R_11589091_SNP [dm6]	C	A	3.411e^-4	0.89	SYNONYMOUS_CODING tou UPSTREAM snoRNA:Psi28S-1936	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	19804793	3R_19804793_SNP [dm3] 3R_23979071_SNP [dm6]	T	C	3.413e^-4	0.89	SYNONYMOUS_CODING CG31140
3L	8132399	3L_8132399_SNP [dm3] 3L_8139299_SNP [dm6]	A	T	3.418e^-4	0.89	SYNONYMOUS_CODING mus301	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	9764426	2R_9764426_SNP [dm3] 2R_13876921_SNP [dm6]	A	G	3.422e^-4	0.89	SYNONYMOUS_CODING shot	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	8647873	3R_8647873_SNP [dm3] 3R_12822151_SNP [dm6]	G	C	3.423e^-4	0.89	INTERGENIC
2L	615624	2L_615624_SNP [dm3] 2L_615624_SNP [dm6]	A	T	3.428e^-4	0.89	INTERGENIC
2L	615633	2L_615633_SNP [dm3] 2L_615633_SNP [dm6]	C	T	3.428e^-4	0.89	INTERGENIC
3L	18384521	3L_18384521_INS [dm3] 3L_18391421_INS [dm6]	G	GG	3.430e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	8963291	2L_8963291_SNP [dm3] 2L_8963291_SNP [dm6]	C	T	3.431e^-4	0.89	SPLICE_SITE_REGION CG32985 UPSTREAM CG9525 INTRON CG32985
3R	18480138	3R_18480138_DEL [dm3] 3R_22654416_DEL [dm6]	GC	T	3.436e^-4	0.89	INTRON CG45058
3L	22638800	3L_22638800_SNP [dm3] 3L_22645700_SNP [dm6]	G	A	3.439e^-4	0.89	UPSTREAM CG33767 INTRON CG33766
2L	7490980	2L_7490980_SNP [dm3] 2L_7490980_SNP [dm6]	G	C	3.447e^-4	0.89	INTRON Ziz	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna mE1_TFBS_HSA
3L	9746527	3L_9746527_SNP [dm3] 3L_9753427_SNP [dm6]	G	C	3.448e^-4	0.89	UTR_5_PRIME CG42268
3R	13926725	3R_13926725_SNP [dm3] 3R_18101003_SNP [dm6]	G	T	3.448e^-4	0.89	INTRON sr
2L	10499559	2L_10499559_SNP [dm3] 2L_10499559_SNP [dm6]	G	A	3.450e^-4	0.89	INTRON Myo31DF
2L	17523990	2L_17523990_SNP [dm3] 2L_17523990_SNP [dm6]	G	A	3.453e^-4	0.89	INTRON Dhc36C & 1 other
2R	9778107	2R_9778107_SNP [dm3] 2R_13890602_SNP [dm6]	G	A	3.457e^-4	0.89	SYNONYMOUS_CODING shot INTRON shot	TF binding site mE1_TFBS_sens
2R	17172225	2R_17172225_SNP [dm3] 2R_21284720_SNP [dm6]	A	T	3.457e^-4	0.89	SYNONYMOUS_CODING MFS16 DOWNSTREAM CG10505
2L	995417	2L_995417_SNP [dm3] 2L_995417_SNP [dm6]	A	T	3.458e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_chinmo
2R	7504972	2R_7504972_SNP [dm3] 2R_11617467_SNP [dm6]	T	G	3.463e^-4	0.89	DOWNSTREAM CR43907 INTRON Egm	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad
2L	6514634	2L_6514634_SNP [dm3] 2L_6514634_SNP [dm6]	C	A	3.466e^-4	0.89	INTRON CG31637
3L	5234167	3L_5234167_SNP [dm3] 3L_5241067_SNP [dm6]	A	G	3.468e^-4	0.89	INTRON shep
2R	17657738	2R_17657738_SNP [dm3] 2R_21770233_SNP [dm6]	C	T	3.469e^-4	0.89	DOWNSTREAM CG30395 INTERGENIC	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_HSA mE1_TFBS_inv
3R	22198638	3R_22198638_SNP [dm3] 3R_26372916_SNP [dm6]	G	C	3.475e^-4	0.89	INTERGENIC
3R	22198173	3R_22198173_SNP [dm3] 3R_26372451_SNP [dm6]	T	A	3.475e^-4	0.89	INTERGENIC
3R	20231460	3R_20231460_SNP [dm3] 3R_24405738_SNP [dm6]	C	T	3.479e^-4	0.89	INTRON nAChRalpha1
3L	8119876	3L_8119876_SNP [dm3] 3L_8126776_SNP [dm6]	T	C	3.492e^-4	0.89	NON_SYNONYMOUS_CODING Uba2 UPSTREAM CdsA	TF binding site mE1_TFBS_cad mE1_TFBS_sens
X	18123298	X_18123298_SNP [dm3] X_18229265_SNP [dm6]	C	G	3.494e^-4	0.89	UPSTREAM CR45622 INTERGENIC
X	3060822	X_3060822_SNP [dm3] X_3166789_SNP [dm6]	T	C	3.496e^-4	0.89	SYNONYMOUS_CODING N	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2L	14334821	2L_14334821_SNP [dm3] 2L_14334821_SNP [dm6]	G	A	3.502e^-4	0.89	DOWNSTREAM ms_2_34Fe INTRON CG33090
2L	11188945	2L_11188945_SNP [dm3] 2L_11188945_SNP [dm6]	G	T	3.512e^-4	0.89	INTRON Ca-beta	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	14429635	X_14429635_SNP [dm3] X_14535602_SNP [dm6]	T	G	3.516e^-4	0.89	INTERGENIC
3R	24458188	3R_24458188_SNP [dm3] 3R_28632466_SNP [dm6]	A	G	3.518e^-4	0.89	INTRON CG10011	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	12510089	2R_12510089_SNP [dm3] 2R_16622584_SNP [dm6]	G	A	3.528e^-4	0.89	INTRON CG5065	TF binding site mE1_TFBS_cad
2L	12524913	2L_12524913_SNP [dm3] 2L_12524913_SNP [dm6]	C	T	3.531e^-4	0.89	INTRON bun
3L	3636962	3L_3636962_SNP [dm3] 3L_3636962_SNP [dm6]	A	C	3.533e^-4	0.89	INTRON dar1
3L	3636963	3L_3636963_INS [dm3] 3L_3636963_INS [dm6]	C	CCTTGG	3.533e^-4	0.89	INTRON dar1
2R	6917215	2R_6917215_SNP [dm3] 2R_11029710_SNP [dm6]	G	T	3.543e^-4	0.89	INTRON luna
3L	6258807	3L_6258807_SNP [dm3] 3L_6265707_SNP [dm6]	G	C	3.548e^-4	0.89	INTERGENIC
X	6143761	X_6143761_SNP [dm3] X_6249728_SNP [dm6]	T	C	3.549e^-4	0.89	SYNONYMOUS_CODING Rbcn-3A	TF binding site mE1_TFBS_chinmo
2R	7130297	2R_7130297_SNP [dm3] 2R_11242792_SNP [dm6]	G	A	3.549e^-4	0.89	UPSTREAM Listericin INTERGENIC
2R	14516528	2R_14516528_SNP [dm3] 2R_18629023_SNP [dm6]	T	G	3.553e^-4	0.89	SYNONYMOUS_CODING Eip55E DOWNSTREAM CG5482	TF binding site mE1_TFBS_sens
3L	1114389	3L_1114389_SNP [dm3] 3L_1114389_SNP [dm6]	T	C	3.571e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	9773169	2R_9773169_SNP [dm3] 2R_13885664_SNP [dm6]	A	G	3.582e^-4	0.89	SYNONYMOUS_CODING shot INTRON shot	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	15183851	2L_15183851_SNP [dm3] 2L_15183851_SNP [dm6]	G	T	3.587e^-4	0.89	INTRON CG4168
3R	17961195	3R_17961195_SNP [dm3] 3R_22135473_SNP [dm6]	A	C	3.595e^-4	0.89	INTRON SKIP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2L	6004725	2L_6004725_SNP [dm3] 2L_6004725_SNP [dm6]	G	A	3.609e^-4	0.89	SYNONYMOUS_CODING Gal DOWNSTREAM Tsp26A EXON CR43866	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	9554581	2L_9554581_SNP [dm3] 2L_9554581_SNP [dm6]	T	A	3.613e^-4	0.89	INTRON jp
3L	9839580	3L_9839580_SNP [dm3] 3L_9846480_SNP [dm6]	T	C	3.614e^-4	0.89	INTRON RasGAP1	TF binding site BDTNP1_TFBS_dl
3R	13417636	3R_13417636_SNP [dm3] 3R_17591914_SNP [dm6]	T	G	3.616e^-4	0.89	INTERGENIC
X	13712164	X_13712164_SNP [dm3] X_13818131_SNP [dm6]	A	G	3.620e^-4	0.89	INTRON Clic
2L	505918	2L_505918_SNP [dm3] 2L_505918_SNP [dm6]	G	A	3.629e^-4	0.89	INTRON ush
X	14921957	X_14921957_DEL [dm3] X_15027924_DEL [dm6]	TA	T	3.630e^-4	0.89	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	2953163	3R_2953163_SNP [dm3] 3R_7127441_SNP [dm6]	C	T	3.635e^-4	0.89	SYNONYMOUS_CODING CG10068 UPSTREAM CR42875 DOWNSTREAM CG10098	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	13355624	2R_13355624_SNP [dm3] 2R_17468119_SNP [dm6]	C	G	3.636e^-4	0.89	SYNONYMOUS_CODING Tes	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	12382358	2L_12382358_SNP [dm3] 2L_12382358_SNP [dm6]	A	C	3.641e^-4	0.89	INTRON bru-2
2R	6860795	2R_6860795_SNP [dm3] 2R_10973290_SNP [dm6]	G	A	3.642e^-4	0.89	INTERGENIC
2R	6860839	2R_6860839_SNP [dm3] 2R_10973334_SNP [dm6]	T	C	3.642e^-4	0.89	INTERGENIC
2L	16359356	2L_16359356_SNP [dm3] 2L_16359356_SNP [dm6]	A	G	3.650e^-4	0.89	INTERGENIC
X	12348898	X_12348898_SNP [dm3] X_12454865_SNP [dm6]	G	A	3.650e^-4	0.89	UTR_5_PRIME CG15927 UPSTREAM CR45615
X	11297933	X_11297933_SNP [dm3] X_11403900_SNP [dm6]	C	T	3.652e^-4	0.89	INTRON dlg1
2L	18559597	2L_18559597_SNP [dm3] 2L_18559597_SNP [dm6]	A	T	3.672e^-4	0.89	INTRON Pde11	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	18559598	2L_18559598_SNP [dm3] 2L_18559598_SNP [dm6]	A	G	3.672e^-4	0.89	INTRON Pde11	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	7027567	3L_7027567_SNP [dm3] 3L_7034467_SNP [dm6]	G	A	3.673e^-4	0.89	INTRON Mp
2L	1912170	2L_1912170_SNP [dm3] 2L_1912170_SNP [dm6]	G	A	3.677e^-4	0.89	UTR_5_PRIME CG7337 INTRON CG7337
3L	15624934	3L_15624934_SNP [dm3] 3L_15631834_SNP [dm6]	C	T	3.679e^-4	0.89	INTRON comm3
2L	513038	2L_513038_SNP [dm3] 2L_513038_SNP [dm6]	A	G	3.683e^-4	0.89	INTRON ush	regulatory region REDfly_CRMs TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	19006383	2R_19006383_SNP [dm3] 2R_23118860_SNP [dm6]	C	T	3.687e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_HSA
2R	13502775	2R_13502775_SNP [dm3] 2R_17615270_SNP [dm6]	A	G	3.687e^-4	0.89	INTRON CG10936	TF binding site mE1_TFBS_inv
2R	1032482	2R_1032482_MNP [dm3] 2R_5144977_MNP [dm6]	CCCT	ATGG	3.688e^-4	0.89	INTRON Atf6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	1032489	2R_1032489_SNP [dm3] 2R_5144984_SNP [dm6]	T	A	3.688e^-4	0.89	INTRON Atf6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	6207945	3L_6207945_SNP [dm3] 3L_6214845_SNP [dm6]	A	G	3.700e^-4	0.89	SYNONYMOUS_CODING LanA	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	6929959	2R_6929959_SNP [dm3] 2R_11042454_SNP [dm6]	C	A	3.703e^-4	0.89	INTRON luna	TF binding site mE1_TFBS_cad
3R	22224032	3R_22224032_SNP [dm3] 3R_26398310_SNP [dm6]	T	A	3.711e^-4	0.89	INTERGENIC
3L	3834900	3L_3834900_SNP [dm3] 3L_3834900_SNP [dm6]	T	A	3.714e^-4	0.89	INTRON enc
X	8962034	X_8962034_SNP [dm3] X_9068001_SNP [dm6]	A	C	3.718e^-4	0.89	UPSTREAM CG15365 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	18078806	2L_18078806_SNP [dm3] 2L_18078806_SNP [dm6]	A	T	3.719e^-4	0.89	INTRON Arr1	TF binding site mE1_TFBS_chinmo
2R	6725103	2R_6725103_SNP [dm3] 2R_10837598_SNP [dm6]	A	G	3.720e^-4	0.89	SYNONYMOUS_CODING CG7686	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	12998515	3L_12998515_SNP [dm3] 3L_13005415_SNP [dm6]	T	G	3.722e^-4	0.89	INTERGENIC
2L	18028891	2L_18028891_SNP [dm3] 2L_18028891_SNP [dm6]	C	A	3.737e^-4	0.89	INTRON rdo
3L	9840423	3L_9840423_SNP [dm3] 3L_9847323_SNP [dm6]	A	G	3.749e^-4	0.89	INTRON RasGAP1
X	4498102	X_4498102_INS [dm3] X_4604069_INS [dm6]	T	TT	3.758e^-4	0.89	INTRON CR32773
2R	16866762	2R_16866762_SNP [dm3] 2R_20979257_SNP [dm6]	A	T	3.764e^-4	0.89	START_GAINED CG9313 UTR_5_PRIME CG9313 UPSTREAM CG15650 & 1 other
3R	23550207	3R_23550207_SNP [dm3] 3R_27724485_SNP [dm6]	G	A	3.778e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2L	437276	2L_437276_INS [dm3] 2L_437276_INS [dm6]	T	TTTGTTT	3.782e^-4	0.89	INTRON ex
2L	15284991	2L_15284991_SNP [dm3] 2L_15284991_SNP [dm6]	A	G	3.800e^-4	0.89	UPSTREAM CG15263 INTERGENIC
2L	18081386	2L_18081386_SNP [dm3] 2L_18081386_SNP [dm6]	A	T	3.803e^-4	0.89	UPSTREAM ninaD DOWNSTREAM Arr1 INTERGENIC
2R	2775997	2R_2775997_SNP [dm3] 2R_6888492_SNP [dm6]	G	A	3.813e^-4	0.89	DOWNSTREAM Spn42De INTERGENIC	TF binding site mE1_TFBS_cad
3L	2506727	3L_2506727_SNP [dm3] 3L_2506727_SNP [dm6]	C	T	3.826e^-4	0.89	UTR_3_PRIME Spn
3R	25187686	3R_25187686_INS [dm3] 3R_29361964_INS [dm6]	T	TT	3.828e^-4	0.89	INTERGENIC
3L	2445052	3L_2445052_SNP [dm3] 3L_2445052_SNP [dm6]	G	A	3.828e^-4	0.89	SYNONYMOUS_CODING CG45186	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	11282065	2R_11282065_SNP [dm3] 2R_15394560_SNP [dm6]	A	C	3.829e^-4	0.89	INTERGENIC
X	14919673	X_14919673_SNP [dm3] X_15025640_SNP [dm6]	A	G	3.830e^-4	0.89	INTRON hiw & 1 other
3R	19815221	3R_19815221_SNP [dm3] 3R_23989499_SNP [dm6]	G	A	3.834e^-4	0.89	SYNONYMOUS_CODING CG13604 DOWNSTREAM CG5902
2R	7523843	2R_7523843_SNP [dm3] 2R_11636338_SNP [dm6]	A	T	3.837e^-4	0.89	INTRON CG9005	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
2L	16855106	2L_16855106_SNP [dm3] 2L_16855106_SNP [dm6]	C	A	3.838e^-4	0.89	INTRON CG31809	transposable element FlyBase
2R	6929966	2R_6929966_SNP [dm3] 2R_11042461_SNP [dm6]	T	C	3.840e^-4	0.89	INTRON luna	TF binding site mE1_TFBS_cad
2L	18089618	2L_18089618_SNP [dm3] 2L_18089618_SNP [dm6]	A	G	3.841e^-4	0.89	INTERGENIC
2L	18869552	2L_18869552_SNP [dm3] 2L_18869552_SNP [dm6]	C	T	3.841e^-4	0.89	INTRON tup	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	12033938	2R_12033938_SNP [dm3] 2R_16146433_SNP [dm6]	C	T	3.849e^-4	0.89	SYNONYMOUS_CODING Ext2 DOWNSTREAM Aats-cys
2L	20821544	2L_20821544_SNP [dm3] 2L_20821544_SNP [dm6]	G	C	3.849e^-4	0.89	UPSTREAM CheB38c INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
X	11222201	X_11222201_SNP [dm3] X_11328168_SNP [dm6]	G	A	3.852e^-4	0.89	SYNONYMOUS_CODING CG1657	TF binding site mE1_TFBS_chinmo
2L	17900902	2L_17900902_SNP [dm3] 2L_17900902_SNP [dm6]	G	A	3.859e^-4	0.89	DOWNSTREAM CR45332 INTERGENIC
2R	8620932	2R_8620932_SNP [dm3] 2R_12733427_SNP [dm6]	G	A	3.862e^-4	0.89	INTRON CG42663	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	17655167	2R_17655167_SNP [dm3] 2R_21767662_SNP [dm6]	A	G	3.866e^-4	0.89	SYNONYMOUS_CODING CG30395 INTRON CG30395
3L	9644155	3L_9644155_SNP [dm3] 3L_9651055_SNP [dm6]	C	T	3.872e^-4	0.89	SYNONYMOUS_CODING CG33696 INTRON fry
2L	17058464	2L_17058464_SNP [dm3] 2L_17058464_SNP [dm6]	G	A	3.884e^-4	0.89	INTERGENIC
3L	5402569	3L_5402569_SNP [dm3] 3L_5409469_SNP [dm6]	T	A	3.887e^-4	0.89	INTERGENIC
3L	4090371	3L_4090371_SNP [dm3] 3L_4090371_SNP [dm6]	G	A	3.889e^-4	0.89	NON_SYNONYMOUS_CODING CG14989	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	16469080	3L_16469080_INS [dm3] 3L_16475980_INS [dm6]	G	GA	3.898e^-4	0.89	INTRON CG33158 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	5615737	2L_5615737_SNP [dm3] 2L_5615737_SNP [dm6]	A	T	3.898e^-4	0.89	DOWNSTREAM CR44795 INTRON CG14010	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb
2R	7504973	2R_7504973_DEL [dm3] 2R_11617468_DEL [dm6]	TT	T	3.912e^-4	0.89	DOWNSTREAM CR43907 INTRON Egm	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad
2L	19819656	2L_19819656_SNP [dm3] 2L_19819656_SNP [dm6]	C	A	3.912e^-4	0.89	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
X	14923006	X_14923006_SNP [dm3] X_15028973_SNP [dm6]	A	T	3.914e^-4	0.89	INTRON hiw & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	20809390	2L_20809390_SNP [dm3] 2L_20809390_SNP [dm6]	G	A	3.916e^-4	0.89	UPSTREAM CG9328 INTRON CG9328	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	14596642	2R_14596642_SNP [dm3] 2R_18709137_SNP [dm6]	G	A	3.919e^-4	0.89	DOWNSTREAM CG15073 INTRON CG15087	TF binding site mE1_TFBS_sens
2R	14596650	2R_14596650_SNP [dm3] 2R_18709145_SNP [dm6]	A	C	3.919e^-4	0.89	DOWNSTREAM CG15073 INTRON CG15087	TF binding site mE1_TFBS_sens
2L	20812397	2L_20812397_SNP [dm3] 2L_20812397_SNP [dm6]	G	A	3.926e^-4	0.89	INTRON CG9328
3R	21187038	3R_21187038_SNP [dm3] 3R_25361316_SNP [dm6]	C	T	3.934e^-4	0.89	INTRON Fur1
2L	20071596	2L_20071596_SNP [dm3] 2L_20071596_SNP [dm6]	G	T	3.939e^-4	0.89	NON_SYNONYMOUS_CODING CG10730 INTRON bwa	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad
3R	8425503	3R_8425503_DEL [dm3] 3R_12599781_DEL [dm6]	TCCAGC	T	3.956e^-4	0.89	INTERGENIC
2L	5894946	2L_5894946_SNP [dm3] 2L_5894946_SNP [dm6]	T	A	3.958e^-4	0.89	INTERGENIC
3R	22198659	3R_22198659_SNP [dm3] 3R_26372937_SNP [dm6]	A	C	3.962e^-4	0.89	INTERGENIC
2L	8970692	2L_8970692_SNP [dm3] 2L_8970692_SNP [dm6]	A	T	3.965e^-4	0.89	UTR_3_PRIME CG9541 DOWNSTREAM CG18088	TF binding site BDTNP1_TFBS_twi
3R	13886312	3R_13886312_SNP [dm3] 3R_18060590_SNP [dm6]	T	G	3.969e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_sens
3R	3339140	3R_3339140_INS [dm3] 3R_7513418_INS [dm6]	G	GCGTG	3.970e^-4	0.89	INTRON alpha-Est8
3L	7929816	3L_7929816_SNP [dm3] 3L_7936716_SNP [dm6]	C	G	3.974e^-4	0.89	SYNONYMOUS_CODING Srp9 UPSTREAM syd	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA
2L	8958836	2L_8958836_SNP [dm3] 2L_8958836_SNP [dm6]	T	A	3.985e^-4	0.89	UPSTREAM CG31886 DOWNSTREAM CG9525 INTRON CG31886	TF binding site BDTNP1_TFBS_z
3L	5383364	3L_5383364_SNP [dm3] 3L_5390264_SNP [dm6]	T	C	3.986e^-4	0.89	INTERGENIC
2L	9554571	2L_9554571_SNP [dm3] 2L_9554571_SNP [dm6]	C	A	3.997e^-4	0.89	INTRON jp
2L	4203607	2L_4203607_SNP [dm3] 2L_4203607_SNP [dm6]	G	A	3.999e^-4	0.89	SYNONYMOUS_CODING ft	TF binding site mE1_TFBS_sens
2R	7991031	2R_7991031_SNP [dm3] 2R_12103526_SNP [dm6]	A	C	4.005e^-4	0.89	INTRON jeb
3L	288692	3L_288692_SNP [dm3] 3L_288692_SNP [dm6]	A	G	4.006e^-4	0.89	INTRON RhoGEF3	TF binding site mE1_TFBS_chinmo
3R	20903209	3R_20903209_SNP [dm3] 3R_25077487_SNP [dm6]	C	T	4.013e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
2L	1035436	2L_1035436_SNP [dm3] 2L_1035436_SNP [dm6]	C	T	4.015e^-4	0.89	UPSTREAM IA-2 INTRON IA-2
2R	13447728	2R_13447728_SNP [dm3] 2R_17560223_SNP [dm6]	T	C	4.015e^-4	0.89	INTRON Klp54D
3R	22200601	3R_22200601_SNP [dm3] 3R_26374879_SNP [dm6]	A	G	4.025e^-4	0.89	INTERGENIC
2L	11483021	2L_11483021_SNP [dm3] 2L_11483021_SNP [dm6]	A	C	4.025e^-4	0.89	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	24508193	3R_24508193_SNP [dm3] 3R_28682471_SNP [dm6]	C	T	4.028e^-4	0.89	UTR_5_PRIME CG9990 INTRON CG9990	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z
3L	5233145	3L_5233145_SNP [dm3] 3L_5240045_SNP [dm6]	A	G	4.039e^-4	0.89	INTRON shep
2L	10970394	2L_10970394_SNP [dm3] 2L_10970394_SNP [dm6]	T	C	4.047e^-4	0.89	UPSTREAM YL-1 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_HSA
X	5325288	X_5325288_SNP [dm3] X_5431255_SNP [dm6]	C	T	4.053e^-4	0.89	SYNONYMOUS_CODING CG15784	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
2R	17853328	2R_17853328_SNP [dm3] 2R_21965823_SNP [dm6]	T	A	4.056e^-4	0.89	INTRON ppk9
2L	18077943	2L_18077943_SNP [dm3] 2L_18077943_SNP [dm6]	G	T	4.062e^-4	0.89	UPSTREAM Arr1 INTERGENIC
3R	20769733	3R_20769733_SNP [dm3] 3R_24944011_SNP [dm6]	T	A	4.063e^-4	0.89	UPSTREAM ssh INTRON ssh	TF binding site BDTNP1_TFBS_dl
X	3210959	X_3210959_SNP [dm3] X_3316926_SNP [dm6]	C	T	4.071e^-4	0.89	UPSTREAM CG10793 INTRON dnc & 1 other
2R	13174684	2R_13174684_SNP [dm3] 2R_17287179_SNP [dm6]	T	C	4.079e^-4	0.89	INTRON mbl	TF binding site BDTNP1_TFBS_ftz mE1_TFBS_HSA
2R	8732365	2R_8732365_INS [dm3] 2R_12844860_INS [dm6]	A	AA	4.080e^-4	0.89	DOWNSTREAM CG17575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	8732381	2R_8732381_SNP [dm3] 2R_12844876_SNP [dm6]	G	A	4.080e^-4	0.89	DOWNSTREAM CG17575 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	922088	3L_922088_SNP [dm3] 3L_922088_SNP [dm6]	A	G	4.080e^-4	0.89	INTRON Glut1	TF binding site mE1_TFBS_chinmo
3L	4257732	3L_4257732_SNP [dm3] 3L_4257732_SNP [dm6]	T	G	4.081e^-4	0.89	INTRON CG15011
2R	7278156	2R_7278156_SNP [dm3] 2R_11390651_SNP [dm6]	C	A	4.083e^-4	0.89	INTRON sprt
3L	12102111	3L_12102111_SNP [dm3] 3L_12109011_SNP [dm6]	T	A	4.095e^-4	0.89	INTERGENIC
3R	25966318	3R_25966318_SNP [dm3] 3R_30140596_SNP [dm6]	T	G	4.100e^-4	0.89	INTRON AdoR	TF binding site mE1_TFBS_chinmo
3L	601113	3L_601113_SNP [dm3] 3L_601113_SNP [dm6]	C	T	4.100e^-4	0.89	INTRON CG13893	TF binding site mE1_TFBS_inv
2L	8941179	2L_8941179_SNP [dm3] 2L_8941179_SNP [dm6]	T	G	4.104e^-4	0.89	SYNONYMOUS_CODING CG9510 DOWNSTREAM CG9515	TF binding site mE1_TFBS_cad
3L	5693657	3L_5693657_SNP [dm3] 3L_5700557_SNP [dm6]	A	C	4.109e^-4	0.89	INTRON sif
2R	13530614	2R_13530614_SNP [dm3] 2R_17643109_SNP [dm6]	C	T	4.118e^-4	0.89	INTERGENIC
3R	22178557	3R_22178557_SNP [dm3] 3R_26352835_SNP [dm6]	G	C	4.120e^-4	0.89	INTRON CG33970
2L	20322077	2L_20322077_SNP [dm3] 2L_20322077_SNP [dm6]	A	G	4.121e^-4	0.89	SYNONYMOUS_CODING spir	TF binding site mE1_TFBS_cad
2L	20812103	2L_20812103_SNP [dm3] 2L_20812103_SNP [dm6]	G	C	4.124e^-4	0.89	INTRON CG9328
2L	12671529	2L_12671529_DEL [dm3] 2L_12671529_DEL [dm6]	TT	T	4.126e^-4	0.89	INTRON pdm2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr
2L	18088237	2L_18088237_SNP [dm3] 2L_18088237_SNP [dm6]	C	A	4.127e^-4	0.89	INTERGENIC
2R	6755759	2R_6755759_SNP [dm3] 2R_10868254_SNP [dm6]	C	T	4.130e^-4	0.89	INTRON CG30015
3L	13010442	3L_13010442_SNP [dm3] 3L_13017342_SNP [dm6]	G	A	4.131e^-4	0.89	SYNONYMOUS_CODING mRpL20 UPSTREAM ste14 DOWNSTREAM CG11267 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_Ubx
3L	607818	3L_607818_SNP [dm3] 3L_607818_SNP [dm6]	T	A	4.135e^-4	0.89	INTERGENIC
2R	9778074	2R_9778074_SNP [dm3] 2R_13890569_SNP [dm6]	A	C	4.140e^-4	0.89	SYNONYMOUS_CODING shot INTRON shot	TF binding site mE1_TFBS_sens
2L	8969027	2L_8969027_SNP [dm3] 2L_8969027_SNP [dm6]	A	T	4.143e^-4	0.89	SYNONYMOUS_CODING CG18088
2L	17060649	2L_17060649_SNP [dm3] 2L_17060649_SNP [dm6]	T	A	4.152e^-4	0.89	INTERGENIC
3L	7804919	3L_7804919_SNP [dm3] 3L_7811819_SNP [dm6]	C	T	4.152e^-4	0.89	UTR_3_PRIME Pdp1 DOWNSTREAM Pdp1
3R	22198604	3R_22198604_SNP [dm3] 3R_26372882_SNP [dm6]	A	T	4.158e^-4	0.89	INTERGENIC
3L	12555314	3L_12555314_SNP [dm3] 3L_12562214_SNP [dm6]	T	G	4.159e^-4	0.89	INTRON sowah
2L	19819663	2L_19819663_SNP [dm3] 2L_19819663_SNP [dm6]	T	C	4.162e^-4	0.89	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3R	7874487	3R_7874487_SNP [dm3] 3R_12048765_SNP [dm6]	A	G	4.166e^-4	0.89	SYNONYMOUS_CODING CG14739	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	13050671	2R_13050671_SNP [dm3] 2R_17163166_SNP [dm6]	G	C	4.172e^-4	0.89	INTERGENIC
3L	1368378	3L_1368378_SNP [dm3] 3L_1368378_SNP [dm6]	C	G	4.173e^-4	0.89	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	22976301	3R_22976301_DEL [dm3] 3R_27150579_DEL [dm6]	CTCAC	C	4.174e^-4	0.89	UTR_5_PRIME CG6051	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2R	8514345	2R_8514345_SNP [dm3] 2R_12626840_SNP [dm6]	T	C	4.176e^-4	0.89	SYNONYMOUS_CODING CG17760
3L	13297507	3L_13297507_SNP [dm3] 3L_13304407_SNP [dm6]	C	T	4.182e^-4	0.89	DOWNSTREAM CR44555 INTERGENIC
2L	18048295	2L_18048295_SNP [dm3] 2L_18048295_SNP [dm6]	A	T	4.188e^-4	0.89	INTRON rdo
3L	3661241	3L_3661241_SNP [dm3] 3L_3661241_SNP [dm6]	A	G	4.198e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	25543444	3R_25543444_SNP [dm3] 3R_29717722_SNP [dm6]	G	A	4.209e^-4	0.89	UPSTREAM Obp99b & 1 other INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_Trl
2L	3894069	2L_3894069_SNP [dm3] 2L_3894069_SNP [dm6]	T	C	4.221e^-4	0.89	INTRON capu
2L	4033997	2L_4033997_SNP [dm3] 2L_4033997_SNP [dm6]	C	G	4.229e^-4	0.89	INTRON ed	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_inv
X	12908150	X_12908150_SNP [dm3] X_13014117_SNP [dm6]	T	C	4.232e^-4	0.89	INTRON rad
2L	12403410	2L_12403410_SNP [dm3] 2L_12403410_SNP [dm6]	T	C	4.233e^-4	0.89	UTR_3_PRIME vir-1
2R	6440906	2R_6440906_SNP [dm3] 2R_10553401_SNP [dm6]	T	C	4.235e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
X	8096063	X_8096063_SNP [dm3] X_8202030_SNP [dm6]	C	T	4.247e^-4	0.89	INTRON sdt	TF binding site mE1_TFBS_inv
2R	5099304	2R_5099304_SNP [dm3] 2R_9211799_SNP [dm6]	G	C	4.249e^-4	0.89	INTERGENIC
3L	5196302	3L_5196302_SNP [dm3] 3L_5203202_SNP [dm6]	T	G	4.251e^-4	0.89	INTRON shep
2R	10633399	2R_10633399_SNP [dm3] 2R_14745894_SNP [dm6]	C	T	4.255e^-4	0.89	UPSTREAM Dro & 1 other INTERGENIC
2R	12364383	2R_12364383_SNP [dm3] 2R_16476878_SNP [dm6]	T	G	4.256e^-4	0.89	INTERGENIC
2L	18867277	2L_18867277_SNP [dm3] 2L_18867277_SNP [dm6]	T	A	4.262e^-4	0.89	UPSTREAM mir-4946 INTRON tup	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	22110516	3R_22110516_SNP [dm3] 3R_26284794_SNP [dm6]	G	A	4.266e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_da
2R	12760793	2R_12760793_SNP [dm3] 2R_16873288_SNP [dm6]	C	T	4.275e^-4	0.89	SYNONYMOUS_CODING CG6429 UPSTREAM CG6435 DOWNSTREAM CG6421	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20773100	3R_20773100_SNP [dm3] 3R_24947378_SNP [dm6]	G	T	4.289e^-4	0.89	UTR_3_PRIME Nmnat UPSTREAM CG13646 DOWNSTREAM Nmnat
3R	20887247	3R_20887247_SNP [dm3] 3R_25061525_SNP [dm6]	C	T	4.291e^-4	0.89	SYNONYMOUS_CODING Unc-13-4B
3L	1368497	3L_1368497_SNP [dm3] 3L_1368497_SNP [dm6]	A	C	4.297e^-4	0.89	INTRON Ptp61F	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
2R	17167256	2R_17167256_SNP [dm3] 2R_21279751_SNP [dm6]	C	T	4.299e^-4	0.89	INTRON Rgk3
2R	17171026	2R_17171026_SNP [dm3] 2R_21283521_SNP [dm6]	T	A	4.299e^-4	0.89	INTRON MFS16	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	21645630	3R_21645630_SNP [dm3] 3R_25819908_SNP [dm6]	C	T	4.304e^-4	0.89	INTERGENIC
2R	14051934	2R_14051934_SNP [dm3] 2R_18164429_SNP [dm6]	T	G	4.304e^-4	0.89	UTR_3_PRIME CG10915 DOWNSTREAM Nup75 & 1 other
X	9679674	X_9679674_SNP [dm3] X_9785641_SNP [dm6]	A	T	4.308e^-4	0.89	INTRON CG32698
2R	1658589	2R_1658589_SNP [dm3] 2R_5771084_SNP [dm6]	G	A	4.312e^-4	0.89	INTRON Gp210
3L	19957862	3L_19957862_SNP [dm3] 3L_19964762_SNP [dm6]	C	T	4.313e^-4	0.89	SYNONYMOUS_CODING Ac76E
2R	14715203	2R_14715203_SNP [dm3] 2R_18827698_SNP [dm6]	A	T	4.314e^-4	0.89	INTRON CG15097
3L	7951371	3L_7951371_SNP [dm3] 3L_7958271_SNP [dm6]	G	C	4.318e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	12825987	2R_12825987_SNP [dm3] 2R_16938482_SNP [dm6]	A	G	4.322e^-4	0.89	UPSTREAM CG43789 DOWNSTREAM CG43788 INTRON Pkc53E
2L	1207587	2L_1207587_SNP [dm3] 2L_1207587_SNP [dm6]	A	T	4.328e^-4	0.89	INTERGENIC
3L	4939600	3L_4939600_SNP [dm3] 3L_4939600_SNP [dm6]	A	G	4.334e^-4	0.89	SYNONYMOUS_CODING Con	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	18480080	3R_18480080_SNP [dm3] 3R_22654358_SNP [dm6]	G	A	4.351e^-4	0.89	INTRON CG45058
3R	14042293	3R_14042293_SNP [dm3] 3R_18216571_SNP [dm6]	T	G	4.372e^-4	0.89	SYNONYMOUS_CODING CG14314	TF binding site mE1_TFBS_cad
3R	7010160	3R_7010160_DEL [dm3] 3R_11184438_DEL [dm6]	AGTTAATGAGTCT...	A	4.378e^-4	0.89	INTERGENIC
2R	10510656	2R_10510656_SNP [dm3] 2R_14623151_SNP [dm6]	C	T	4.380e^-4	0.89	UPSTREAM snoRNA:Me28S-A992 & 3 others DOWNSTREAM snoRNA:Me28S-C3227a & 4 others INTRON Uhg5	TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1
3L	3837750	3L_3837750_SNP [dm3] 3L_3837750_SNP [dm6]	C	A	4.382e^-4	0.89	SYNONYMOUS_CODING enc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	19736705	2L_19736705_SNP [dm3] 2L_19736705_SNP [dm6]	C	T	4.388e^-4	0.89	SYNONYMOUS_CODING Nf-YB UPSTREAM CG10462	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3L	5234634	3L_5234634_DEL [dm3] 3L_5241534_DEL [dm6]	TGT	T	4.391e^-4	0.89	INTRON shep
2L	8940929	2L_8940929_SNP [dm3] 2L_8940929_SNP [dm6]	G	C	4.397e^-4	0.89	INTRON CG9510	TF binding site mE1_TFBS_cad
2L	1346062	2L_1346062_SNP [dm3] 2L_1346062_SNP [dm6]	C	G	4.400e^-4	0.89	UPSTREAM CR45005 DOWNSTREAM Cdlc2 EXON CR45006
3R	5819176	3R_5819176_SNP [dm3] 3R_9993454_SNP [dm6]	C	A	4.404e^-4	0.89	UTR_3_PRIME Glut4EF
2L	18867236	2L_18867236_SNP [dm3] 2L_18867236_SNP [dm6]	G	C	4.421e^-4	0.89	UPSTREAM mir-4946 INTRON tup	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	981277	3L_981277_SNP [dm3] 3L_981277_SNP [dm6]	C	T	4.434e^-4	0.89	DOWNSTREAM Glut1 INTRON Glut1	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8713847	2L_8713847_SNP [dm3] 2L_8713847_SNP [dm6]	G	A	4.437e^-4	0.89	INTRON raw
3L	18370178	3L_18370178_MNP [dm3] 3L_18377078_MNP [dm6]	TGA	CAG	4.438e^-4	0.89	INTERGENIC
3L	8832720	3L_8832720_SNP [dm3] 3L_8839620_SNP [dm6]	G	T	4.439e^-4	0.89	DOWNSTREAM CG32026 INTRON dally	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	539107	3L_539107_SNP [dm3] 3L_539107_SNP [dm6]	A	G	4.442e^-4	0.89	INTRON klar	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_Trl
2R	10715567	2R_10715567_SNP [dm3] 2R_14828062_SNP [dm6]	C	T	4.444e^-4	0.89	INTERGENIC
2R	9938504	2R_9938504_SNP [dm3] 2R_14050999_SNP [dm6]	T	C	4.453e^-4	0.89	INTRON mam
2L	1310013	2L_1310013_SNP [dm3] 2L_1310013_SNP [dm6]	A	T	4.461e^-4	0.89	INTERGENIC
2L	5623989	2L_5623989_SNP [dm3] 2L_5623989_SNP [dm6]	T	C	4.462e^-4	0.89	UPSTREAM Cyp6a16 INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
X	7233728	X_7233728_DEL [dm3] X_7339695_DEL [dm6]	ACCGTGTCCTATATTTACAT...	A	4.464e^-4	0.89	INTRON CR44357 & 2 others	TF binding site BDTNP1_TFBS_hb mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_kn
3L	5234005	3L_5234005_SNP [dm3] 3L_5240905_SNP [dm6]	C	T	4.469e^-4	0.89	INTRON shep
3R	13929390	3R_13929390_SNP [dm3] 3R_18103668_SNP [dm6]	C	T	4.469e^-4	0.89	INTRON sr
3R	24628647	3R_24628647_SNP [dm3] 3R_28802925_SNP [dm6]	C	T	4.474e^-4	0.89	INTERGENIC
2L	19819662	2L_19819662_SNP [dm3] 2L_19819662_SNP [dm6]	A	G	4.489e^-4	0.89	INTRON sick	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
2L	19619270	2L_19619270_SNP [dm3] 2L_19619270_SNP [dm6]	C	T	4.491e^-4	0.89	INTRON Lar
3L	9579341	3L_9579341_SNP [dm3] 3L_9586241_SNP [dm6]	A	T	4.504e^-4	0.89	INTRON CG42673
3L	9579369	3L_9579369_SNP [dm3] 3L_9586269_SNP [dm6]	G	T	4.504e^-4	0.89	INTRON CG42673	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	20887232	3R_20887232_SNP [dm3] 3R_25061510_SNP [dm6]	C	T	4.515e^-4	0.89	SYNONYMOUS_CODING Unc-13-4B
3L	6828133	3L_6828133_SNP [dm3] 3L_6835033_SNP [dm6]	G	C	4.519e^-4	0.89	INTERGENIC
2L	18100449	2L_18100449_SNP [dm3] 2L_18100449_SNP [dm6]	T	C	4.523e^-4	0.89	INTERGENIC
2L	18100471	2L_18100471_SNP [dm3] 2L_18100471_SNP [dm6]	C	T	4.523e^-4	0.89	INTERGENIC
3L	479203	3L_479203_SNP [dm3] 3L_479203_SNP [dm6]	C	A	4.533e^-4	0.89	INTRON klar	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA mE1_TFBS_sens
X	18110266	X_18110266_DEL [dm3] X_18216233_DEL [dm6]	TTT	T	4.544e^-4	0.89	INTRON CG33639
2R	2016601	2R_2016601_SNP [dm3] 2R_6129096_SNP [dm6]	C	A	4.548e^-4	0.89	INTRON EcR
2R	17171730	2R_17171730_SNP [dm3] 2R_21284225_SNP [dm6]	G	A	4.554e^-4	0.89	INTRON MFS16	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	3836661	3L_3836661_SNP [dm3] 3L_3836661_SNP [dm6]	T	A	4.559e^-4	0.89	SYNONYMOUS_CODING enc	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	12595342	X_12595342_SNP [dm3] X_12701309_SNP [dm6]	T	C	4.567e^-4	0.89	INTRON Smr	TF binding site BDTNP1_TFBS_dl
3L	293666	3L_293666_SNP [dm3] 3L_293666_SNP [dm6]	T	C	4.573e^-4	0.89	INTRON RhoGEF3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	16736736	3L_16736736_SNP [dm3] 3L_16743636_SNP [dm6]	T	C	4.573e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	11797414	2R_11797414_SNP [dm3] 2R_15909909_SNP [dm6]	G	T	4.575e^-4	0.89	INTRON sli	TF binding site mE1_TFBS_inv
2R	12760457	2R_12760457_SNP [dm3] 2R_16872952_SNP [dm6]	A	C	4.579e^-4	0.89	UPSTREAM CG6429 & 1 other DOWNSTREAM CG6421 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	10715564	2R_10715564_SNP [dm3] 2R_14828059_SNP [dm6]	C	T	4.584e^-4	0.89	INTERGENIC
2L	17521446	2L_17521446_SNP [dm3] 2L_17521446_SNP [dm6]	T	G	4.593e^-4	0.89	SYNONYMOUS_CODING CG15143 INTRON Dhc36C
2R	13799019	2R_13799019_SNP [dm3] 2R_17911514_SNP [dm6]	T	C	4.601e^-4	0.89	INTRON Elk
3R	7181565	3R_7181565_SNP [dm3] 3R_11355843_SNP [dm6]	C	T	4.614e^-4	0.89	INTRON pros	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10251804	3R_10251804_SNP [dm3] 3R_14426082_SNP [dm6]	A	G	4.617e^-4	0.89	INTRON cv-c
3L	12606416	3L_12606416_SNP [dm3] 3L_12613316_SNP [dm6]	T	G	4.626e^-4	0.89	INTRON caup	silencer mE1_HDAC_PRE
2L	17724177	2L_17724177_SNP [dm3] 2L_17724177_SNP [dm6]	A	G	4.626e^-4	0.89	INTRON CadN
2R	9393833	2R_9393833_SNP [dm3] 2R_13506328_SNP [dm6]	C	T	4.632e^-4	0.89	UPSTREAM mip120 DOWNSTREAM mars INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_HSA
2R	4464429	2R_4464429_SNP [dm3] 2R_8576924_SNP [dm6]	A	G	4.634e^-4	0.89	SYNONYMOUS_CODING CG42326	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	8540699	3L_8540699_SNP [dm3] 3L_8547599_SNP [dm6]	T	A	4.637e^-4	0.89	INTRON rhea	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	3844479	3L_3844479_SNP [dm3] 3L_3844479_SNP [dm6]	T	G	4.640e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_z mE1_TFBS_cad
2R	19072388	2R_19072388_SNP [dm3] 2R_23184865_SNP [dm6]	G	A	4.643e^-4	0.89	SYNONYMOUS_CODING CG13539 INTRON CG34371	TF binding site mE1_TFBS_sens
3L	1134882	3L_1134882_SNP [dm3] 3L_1134882_SNP [dm6]	A	G	4.646e^-4	0.89	INTERGENIC	regulatory region REDfly_CRMs
3L	7759535	3L_7759535_SNP [dm3] 3L_7766435_SNP [dm6]	T	C	4.650e^-4	0.89	DOWNSTREAM CG32371 INTRON Clk
X	17652927	X_17652927_SNP [dm3] X_17758894_SNP [dm6]	A	C	4.653e^-4	0.89	INTERGENIC
3L	8119835	3L_8119835_SNP [dm3] 3L_8126735_SNP [dm6]	A	G	4.660e^-4	0.89	SYNONYMOUS_CODING Uba2	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	9298307	3L_9298307_SNP [dm3] 3L_9305207_SNP [dm6]	G	T	4.665e^-4	0.89	INTERGENIC
2L	19387456	2L_19387456_SNP [dm3] 2L_19387456_SNP [dm6]	A	G	4.666e^-4	0.89	INTRON CG17549
2R	8173443	2R_8173443_SNP [dm3] 2R_12285938_SNP [dm6]	C	T	4.679e^-4	0.89	UPSTREAM CG42700 INTRON CG42700
2R	16995957	2R_16995957_DEL [dm3] 2R_21108452_DEL [dm6]	TTCGT	T	4.689e^-4	0.89	INTRON ktub
3R	26432077	3R_26432077_SNP [dm3] 3R_30606355_SNP [dm6]	C	T	4.693e^-4	0.89	NON_SYNONYMOUS_CODING CG31016 DOWNSTREAM PH4alphaNE3
X	5182971	X_5182971_SNP [dm3] X_5288938_SNP [dm6]	C	A	4.694e^-4	0.89	INTERGENIC
2L	1265735	2L_1265735_SNP [dm3] 2L_1265735_SNP [dm6]	A	T	4.695e^-4	0.89	INTRON robo3
2R	10818164	2R_10818164_SNP [dm3] 2R_14930659_SNP [dm6]	T	A	4.697e^-4	0.89	INTRON CG10253	TF binding site mE1_TFBS_inv
X	12090730	X_12090730_SNP [dm3] X_12196697_SNP [dm6]	T	A	4.702e^-4	0.89	INTRON Ten-a
X	16871377	X_16871377_SNP [dm3] X_16977344_SNP [dm6]	T	A	4.706e^-4	0.89	INTRON CG45002
3R	14279287	3R_14279287_SNP [dm3] 3R_18453565_SNP [dm6]	A	G	4.714e^-4	0.89	INTRON fru	TF binding site mE1_TFBS_inv
X	14816733	X_14816733_SNP [dm3] X_14922700_SNP [dm6]	T	A	4.726e^-4	0.89	INTRON Flo2 & 1 other
X	5948292	X_5948292_SNP [dm3] X_6054259_SNP [dm6]	T	A	4.728e^-4	0.89	INTRON CG5921	TF binding site mE1_TFBS_chinmo
3L	2662429	3L_2662429_SNP [dm3] 3L_2662429_SNP [dm6]	G	A	4.732e^-4	0.89	NON_SYNONYMOUS_CODING CG33234 DOWNSTREAM CG33233 INTRON Fife
3L	1393193	3L_1393193_SNP [dm3] 3L_1393193_SNP [dm6]	G	A	4.736e^-4	0.89	INTRON Ptp61F	TF binding site mE1_TFBS_cad
2L	16382292	2L_16382292_SNP [dm3] 2L_16382292_SNP [dm6]	G	A	4.745e^-4	0.89	INTERGENIC
3L	7344880	3L_7344880_SNP [dm3] 3L_7351780_SNP [dm6]	A	G	4.753e^-4	0.89	INTRON qm	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	26435105	3R_26435105_DEL [dm3] 3R_30609383_DEL [dm6]	TCTGCATATGATTT...	T	4.759e^-4	0.89	UTR_3_PRIME CG31016
3R	24570171	3R_24570171_INS [dm3] 3R_28744449_INS [dm6]	A	AT	4.771e^-4	0.89	UTR_5_PRIME AstA-R2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	9970312	2L_9970312_SNP [dm3] 2L_9970312_SNP [dm6]	C	T	4.783e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	23550268	3R_23550268_SNP [dm3] 3R_27724546_SNP [dm6]	C	T	4.793e^-4	0.89	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2R	10818159	2R_10818159_INS [dm3] 2R_14930654_INS [dm6]	G	GAATG	4.802e^-4	0.89	INTRON CG10253	TF binding site mE1_TFBS_inv
2L	18089913	2L_18089913_SNP [dm3] 2L_18089913_SNP [dm6]	A	G	4.804e^-4	0.89	DOWNSTREAM CG15153 INTERGENIC
3R	20769569	3R_20769569_SNP [dm3] 3R_24943847_SNP [dm6]	T	A	4.804e^-4	0.89	START_GAINED ssh UTR_5_PRIME ssh INTRON ssh	TF binding site BDTNP1_TFBS_dl
2R	14596658	2R_14596658_SNP [dm3] 2R_18709153_SNP [dm6]	T	A	4.805e^-4	0.89	DOWNSTREAM CG15073 INTRON CG15087	TF binding site mE1_TFBS_sens
3R	22198751	3R_22198751_SNP [dm3] 3R_26373029_SNP [dm6]	T	A	4.807e^-4	0.89	INTERGENIC
3L	529630	3L_529630_SNP [dm3] 3L_529630_SNP [dm6]	G	A	4.808e^-4	0.89	DOWNSTREAM CG34269 INTRON klar
3L	3242792	3L_3242792_SNP [dm3] 3L_3242792_SNP [dm6]	C	T	4.810e^-4	0.89	DOWNSTREAM CG12078 INTERGENIC
3R	3894838	3R_3894838_SNP [dm3] 3R_8069116_SNP [dm6]	G	T	4.823e^-4	0.89	INTRON mAChR-B
2L	561505	2L_561505_SNP [dm3] 2L_561505_SNP [dm6]	T	C	4.833e^-4	0.89	SYNONYMOUS_CODING CG11835 DOWNSTREAM CG2789	TF binding site mE1_TFBS_chinmo
3L	3008908	3L_3008908_SNP [dm3] 3L_3008908_SNP [dm6]	T	C	4.836e^-4	0.89	SYNONYMOUS_CODING FMRFaR	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	13214111	2R_13214111_SNP [dm3] 2R_17326606_SNP [dm6]	T	C	4.836e^-4	0.89	INTRON mbl

By genomic position
Variant impact
Gene name

hr_ERStress_Survival phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results