©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Covariate | p-value | Significance |
---|---|---|
In_3R_K | 0.07534 |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
3R | 12999077 | 3R_12999077_SNP [dm3] 3R_17173355_SNP [dm6] | T | A | 1.917e-7 | 0.178 |
INTRON
Mur89F |
||
3R | 12994092 | 3R_12994092_SNP [dm3] 3R_17168370_SNP [dm6] | A | T | 2.522e-7 | 0.178 |
INTRON
Mur89F |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
3R | 12989550 | 3R_12989550_SNP [dm3] 3R_17163828_SNP [dm6] | T | A | 4.649e-7 | 0.178 |
INTRON
Mur89F |
||
3R | 12998833 | 3R_12998833_DEL [dm3] 3R_17173111_DEL [dm6] | TCAGA | C | 5.230e-7 | 0.178 |
INTRON
Mur89F |
||
3R | 12994111 | 3R_12994111_SNP [dm3] 3R_17168389_SNP [dm6] | T | G | 5.461e-7 | 0.178 |
INTRON
Mur89F |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sbb
|
|
3R | 12998517 | 3R_12998517_SNP [dm3] 3R_17172795_SNP [dm6] | A | T | 6.679e-7 | 0.178 |
INTRON
Mur89F |
||
3R | 13004916 | 3R_13004916_SNP [dm3] 3R_17179194_SNP [dm6] | G | A | 7.074e-7 | 0.178 |
INTRON
Mur89F |
||
3R | 12999178 | 3R_12999178_SNP [dm3] 3R_17173456_SNP [dm6] | T | A | 7.609e-7 | 0.178 |
INTRON
Mur89F |
||
X | 5725042 | X_5725042_SNP [dm3] X_5831009_SNP [dm6] | T | A | 8.812e-7 | 0.184 |
DOWNSTREAM
CR43264 INTRON CG15765 |
||
3R | 12993794 | 3R_12993794_SNP [dm3] 3R_17168072_SNP [dm6] | G | A | 9.918e-7 | 0.186 |
INTRON
Mur89F |
||
3R | 12989396 | 3R_12989396_SNP [dm3] 3R_17163674_SNP [dm6] | G | C | 1.346e-6 | 0.202 |
INTRON
Mur89F |
||
3L | 19043600 | 3L_19043600_SNP [dm3] 3L_19050500_SNP [dm6] | C | G | 1.394e-6 | 0.202 |
DOWNSTREAM
Acp76A INTERGENIC |
||
2L | 3993299 | 2L_3993299_SNP [dm3] 2L_3993299_SNP [dm6] | G | T | 1.511e-6 | 0.202 |
INTERGENIC
|
||
3R | 12998815 | 3R_12998815_SNP [dm3] 3R_17173093_SNP [dm6] | G | A | 1.523e-6 | 0.202 |
INTRON
Mur89F |
||
X | 5725046 | X_5725046_SNP [dm3] X_5831013_SNP [dm6] | A | T | 1.683e-6 | 0.202 |
DOWNSTREAM
CR43264 INTRON CG15765 |
||
X | 5725128 | X_5725128_SNP [dm3] X_5831095_SNP [dm6] | G | C | 1.811e-6 | 0.202 |
DOWNSTREAM
CR43264 INTRON CG15765 |
||
3R | 25463591 | 3R_25463591_SNP [dm3] 3R_29637869_SNP [dm6] | C | T | 1.828e-6 | 0.202 |
INTRON
Dop1R2 |
||
2L | 9311446 | 2L_9311446_SNP [dm3] 2L_9311446_SNP [dm6] | A | G | 2.030e-6 | 0.202 |
INTERGENIC
|
||
3R | 8083320 | 3R_8083320_SNP [dm3] 3R_12257598_SNP [dm6] | G | A | 2.146e-6 | 0.202 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
|
|
3R | 12984799 | 3R_12984799_SNP [dm3] 3R_17159077_SNP [dm6] | G | A | 2.210e-6 | 0.202 |
SYNONYMOUS_CODING
Mur89F |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 13002427 | 3R_13002427_SNP [dm3] 3R_17176705_SNP [dm6] | C | T | 2.262e-6 | 0.202 |
INTRON
Mur89F |
||
2L | 6330099 | 2L_6330099_SNP [dm3] 2L_6330099_SNP [dm6] | T | C | 2.582e-6 | 0.22 |
INTRON
PDZ-GEF |
TF binding site
mE1_TFBS_cad
|
|
3R | 12989269 | 3R_12989269_SNP [dm3] 3R_17163547_SNP [dm6] | A | T | 2.966e-6 | 0.242 |
INTRON
Mur89F |
||
3R | 20410068 | 3R_20410068_SNP [dm3] 3R_24584346_SNP [dm6] | C | T | 3.210e-6 | 0.251 |
SYNONYMOUS_CODING
CG13625 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 5881190 | 3L_5881190_SNP [dm3] 3L_5888090_SNP [dm6] | T | A | 3.688e-6 | 0.269 |
INTERGENIC
|
||
3R | 13005036 | 3R_13005036_SNP [dm3] 3R_17179314_SNP [dm6] | G | A | 3.734e-6 | 0.269 |
INTRON
Mur89F |
||
3L | 19043594 | 3L_19043594_SNP [dm3] 3L_19050494_SNP [dm6] | C | T | 4.152e-6 | 0.278 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3L | 19043597 | 3L_19043597_INS [dm3] 3L_19050497_INS [dm6] | T | TA | 4.152e-6 | 0.278 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3R | 13810644 | 3R_13810644_DEL [dm3] 3R_17984922_DEL [dm6] | CGGTCCGAAATG... | C | 4.450e-6 | 0.288 |
INTRON
cpo |
||
3R | 12990249 | 3R_12990249_SNP [dm3] 3R_17164527_SNP [dm6] | C | T | 4.729e-6 | 0.291 |
INTRON
Mur89F |
||
3R | 12989315 | 3R_12989315_SNP [dm3] 3R_17163593_SNP [dm6] | T | C | 4.937e-6 | 0.291 |
INTRON
Mur89F |
||
3R | 12999103 | 3R_12999103_SNP [dm3] 3R_17173381_SNP [dm6] | A | C | 5.251e-6 | 0.291 |
INTRON
Mur89F |
||
3R | 12990431 | 3R_12990431_SNP [dm3] 3R_17164709_SNP [dm6] | C | T | 5.348e-6 | 0.291 |
INTRON
Mur89F |
||
3R | 12989251 | 3R_12989251_SNP [dm3] 3R_17163529_SNP [dm6] | G | T | 5.544e-6 | 0.291 |
INTRON
Mur89F |
||
2R | 9608642 | 2R_9608642_SNP [dm3] 2R_13721137_SNP [dm6] | T | A | 5.659e-6 | 0.291 |
INTRON
fas |
||
3R | 12999641 | 3R_12999641_SNP [dm3] 3R_17173919_SNP [dm6] | A | G | 5.749e-6 | 0.291 |
INTRON
Mur89F |
||
2L | 5160509 | 2L_5160509_SNP [dm3] 2L_5160509_SNP [dm6] | C | T | 5.749e-6 | 0.291 |
SYNONYMOUS_CODING
Msp300 INTRON Msp300 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 8897771 | 2R_8897771_SNP [dm3] 2R_13010266_SNP [dm6] | C | T | 5.960e-6 | 0.293 |
INTERGENIC
|
||
X | 11119047 | X_11119047_DEL [dm3] X_11225014_DEL [dm6] | CTTCTGATGC | C | 6.178e-6 | 0.293 |
CODON_DELETION
CG44422 UTR_3_PRIME CG44422 |
TF binding site
mE1_TFBS_chinmo
|
|
3L | 16273752 | 3L_16273752_SNP [dm3] 3L_16280652_SNP [dm6] | C | A | 6.241e-6 | 0.293 |
SYNONYMOUS_CODING
CG13064 DOWNSTREAM CG13049 |
||
3R | 27272298 | 3R_27272298_SNP [dm3] 3R_31446576_SNP [dm6] | T | G | 6.829e-6 | 0.309 |
INTRON
Gprk2 |
||
3R | 12998860 | 3R_12998860_SNP [dm3] 3R_17173138_SNP [dm6] | C | T | 6.981e-6 | 0.309 |
INTRON
Mur89F |
||
3R | 20410128 | 3R_20410128_SNP [dm3] 3R_24584406_SNP [dm6] | C | T | 7.296e-6 | 0.309 |
SYNONYMOUS_CODING
CG13625 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_sens
|
|
3R | 12986477 | 3R_12986477_SNP [dm3] 3R_17160755_SNP [dm6] | C | T | 7.507e-6 | 0.309 |
INTRON
Mur89F |
||
3R | 27272280 | 3R_27272280_SNP [dm3] 3R_31446558_SNP [dm6] | G | A | 7.591e-6 | 0.309 |
INTRON
Gprk2 |
||
3R | 6157287 | 3R_6157287_SNP [dm3] 3R_10331565_SNP [dm6] | C | T | 7.743e-6 | 0.309 |
UPSTREAM
CG12818 & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_ttk
|
|
3L | 12476921 | 3L_12476921_SNP [dm3] 3L_12483821_SNP [dm6] | G | A | 7.912e-6 | 0.309 |
INTRON
CG10663 & 1 other |
||
3L | 19043563 | 3L_19043563_SNP [dm3] 3L_19050463_SNP [dm6] | T | C | 8.077e-6 | 0.309 |
DOWNSTREAM
Acp76A INTERGENIC |
||
2L | 8568256 | 2L_8568256_SNP [dm3] 2L_8568256_SNP [dm6] | G | A | 8.082e-6 | 0.309 |
INTRON
Sema-1a |
||
2L | 9239515 | 2L_9239515_SNP [dm3] 2L_9239515_SNP [dm6] | C | T | 8.796e-6 | 0.33 |
SYNONYMOUS_CODING
tai |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
3L | 7837668 | 3L_7837668_SNP [dm3] 3L_7844568_SNP [dm6] | T | C | 9.347e-6 | 0.337 |
INTRON
Pdp1 |
regulatory region
REDfly_CRMs
|
|
3R | 12986349 | 3R_12986349_SNP [dm3] 3R_17160627_SNP [dm6] | G | C | 9.365e-6 | 0.337 |
INTRON
Mur89F |
||
3L | 19043580 | 3L_19043580_SNP [dm3] 3L_19050480_SNP [dm6] | A | C | 9.531e-6 | 0.337 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3L | 19043654 | 3L_19043654_SNP [dm3] 3L_19050554_SNP [dm6] | T | A | 9.806e-6 | 0.341 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3R | 13596418 | 3R_13596418_SNP [dm3] 3R_17770696_SNP [dm6] | A | C | 1.007e-5 | 0.342 |
INTRON
CG43102 |
||
2L | 9312449 | 2L_9312449_SNP [dm3] 2L_9312449_SNP [dm6] | G | A | 1.037e-5 | 0.342 |
INTERGENIC
|
||
3R | 11815768 | 3R_11815768_SNP [dm3] 3R_15990046_SNP [dm6] | T | C | 1.039e-5 | 0.342 |
INTRON
srp & 1 other |
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2L | 9312434 | 2L_9312434_SNP [dm3] 2L_9312434_SNP [dm6] | A | G | 1.061e-5 | 0.343 |
INTERGENIC
|
||
3R | 12994827 | 3R_12994827_SNP [dm3] 3R_17169105_SNP [dm6] | G | A | 1.110e-5 | 0.353 |
INTRON
Mur89F |
||
2R | 16227739 | 2R_16227739_SNP [dm3] 2R_20340234_SNP [dm6] | A | G | 1.196e-5 | 0.374 |
INTERGENIC
|
||
3R | 13003334 | 3R_13003334_SNP [dm3] 3R_17177612_SNP [dm6] | T | A | 1.221e-5 | 0.375 |
INTRON
Mur89F |
||
3R | 13002919 | 3R_13002919_SNP [dm3] 3R_17177197_SNP [dm6] | T | G | 1.238e-5 | 0.375 |
INTRON
Mur89F |
||
X | 6297423 | X_6297423_SNP [dm3] X_6403390_SNP [dm6] | T | A | 1.270e-5 | 0.378 |
INTERGENIC
|
||
3R | 13002419 | 3R_13002419_SNP [dm3] 3R_17176697_SNP [dm6] | C | G | 1.366e-5 | 0.395 |
INTRON
Mur89F |
||
3R | 23768127 | 3R_23768127_SNP [dm3] 3R_27942405_SNP [dm6] | G | A | 1.391e-5 | 0.395 |
DOWNSTREAM
mfrn INTRON CG5514 |
||
3R | 25187133 | 3R_25187133_SNP [dm3] 3R_29361411_SNP [dm6] | A | G | 1.393e-5 | 0.395 |
INTERGENIC
|
||
2R | 19184109 | 2R_19184109_SNP [dm3] 2R_23296586_SNP [dm6] | G | A | 1.443e-5 | 0.395 |
INTERGENIC
|
||
X | 17319643 | X_17319643_SNP [dm3] X_17425610_SNP [dm6] | T | C | 1.468e-5 | 0.395 |
UPSTREAM
CG5613 INTRON CG12994 & 1 other |
||
3L | 19043620 | 3L_19043620_SNP [dm3] 3L_19050520_SNP [dm6] | A | G | 1.517e-5 | 0.395 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3R | 8083723 | 3R_8083723_SNP [dm3] 3R_12258001_SNP [dm6] | C | T | 1.539e-5 | 0.395 |
UPSTREAM
svp & 1 other INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
|
|
2R | 4573949 | 2R_4573949_SNP [dm3] 2R_8686444_SNP [dm6] | T | A | 1.561e-5 | 0.395 |
INTERGENIC
|
||
2R | 18013569 | 2R_18013569_SNP [dm3] 2R_22126064_SNP [dm6] | C | T | 1.586e-5 | 0.395 |
SYNONYMOUS_CODING
GM130 |
TF binding site
mE1_TFBS_cad
|
|
3L | 11451442 | 3L_11451442_SNP [dm3] 3L_11458342_SNP [dm6] | T | C | 1.651e-5 | 0.395 |
UTR_5_PRIME
CG12289 UPSTREAM CG7551 |
TF binding site
BDTNP1_TFBS_sna
|
|
3L | 16277225 | 3L_16277225_SNP [dm3] 3L_16284125_SNP [dm6] | C | A | 1.676e-5 | 0.395 |
UPSTREAM
CG13048 DOWNSTREAM CG13047 INTERGENIC |
||
3L | 18846991 | 3L_18846991_SNP [dm3] 3L_18853891_SNP [dm6] | G | A | 1.677e-5 | 0.395 |
UPSTREAM
CR45387 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
3R | 21296405 | 3R_21296405_SNP [dm3] 3R_25470683_SNP [dm6] | C | T | 1.726e-5 | 0.395 |
INTRON
Fur1 |
TF binding site
BDTNP1_TFBS_twi
|
|
3R | 10312908 | 3R_10312908_SNP [dm3] 3R_14487186_SNP [dm6] | C | T | 1.739e-5 | 0.395 |
INTERGENIC
|
||
3L | 19043525 | 3L_19043525_SNP [dm3] 3L_19050425_SNP [dm6] | A | T | 1.743e-5 | 0.395 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3R | 11808750 | 3R_11808750_SNP [dm3] 3R_15983028_SNP [dm6] | A | G | 1.743e-5 | 0.395 |
SYNONYMOUS_CODING
Hel89B |
TF binding site
mE1_TFBS_cad
|
|
3R | 7551153 | 3R_7551153_SNP [dm3] 3R_11725431_SNP [dm6] | T | G | 1.790e-5 | 0.395 |
INTRON
CG12594 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_inv
|
|
2L | 6904346 | 2L_6904346_SNP [dm3] 2L_6904346_SNP [dm6] | A | C | 1.792e-5 | 0.395 |
SYNONYMOUS_CODING
Nlg2 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 7290354 | 2L_7290354_SNP [dm3] 2L_7290354_SNP [dm6] | T | C | 1.792e-5 | 0.395 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
X | 11823387 | X_11823387_SNP [dm3] X_11929354_SNP [dm6] | T | C | 1.812e-5 | 0.395 |
SYNONYMOUS_CODING
CG10362 |
||
3L | 9680067 | 3L_9680067_SNP [dm3] 3L_9686967_SNP [dm6] | A | G | 1.823e-5 | 0.395 |
DOWNSTREAM
CG16719 INTRON CG6767 |
||
3R | 19054662 | 3R_19054662_SNP [dm3] 3R_23228940_SNP [dm6] | T | C | 1.831e-5 | 0.395 |
UTR_3_PRIME
CG4467 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3R | 27272252 | 3R_27272252_SNP [dm3] 3R_31446530_SNP [dm6] | C | T | 1.835e-5 | 0.395 |
INTRON
Gprk2 |
||
3R | 13003355 | 3R_13003355_SNP [dm3] 3R_17177633_SNP [dm6] | G | C | 1.881e-5 | 0.395 |
INTRON
Mur89F |
||
3L | 19043547 | 3L_19043547_DEL [dm3] 3L_19050447_DEL [dm6] | AA | T | 1.891e-5 | 0.395 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3L | 16271712 | 3L_16271712_SNP [dm3] 3L_16278612_SNP [dm6] | C | T | 1.901e-5 | 0.395 |
UTR_3_PRIME
CG13050 DOWNSTREAM CG13065 |
||
3R | 25365316 | 3R_25365316_SNP [dm3] 3R_29539594_SNP [dm6] | G | C | 1.915e-5 | 0.395 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_twi
|
|
3R | 20410073 | 3R_20410073_SNP [dm3] 3R_24584351_SNP [dm6] | G | T | 1.916e-5 | 0.395 |
SYNONYMOUS_CODING
CG13625 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 6243520 | 2L_6243520_DEL [dm3] 2L_6243520_DEL [dm6] | AA | T | 1.972e-5 | 0.401 |
INTERGENIC
|
||
3L | 19043531 | 3L_19043531_DEL [dm3] 3L_19050431_DEL [dm6] | ACCA | A | 1.990e-5 | 0.401 |
DOWNSTREAM
Acp76A INTERGENIC |
||
3R | 13810624 | 3R_13810624_SNP [dm3] 3R_17984902_SNP [dm6] | A | G | 2.082e-5 | 0.403 |
INTRON
cpo |
||
3L | 10751035 | 3L_10751035_SNP [dm3] 3L_10757935_SNP [dm6] | A | G | 2.085e-5 | 0.403 |
INTERGENIC
|
||
3R | 19500472 | 3R_19500472_INS [dm3] 3R_23674750_INS [dm6] | C | CAATGC | 2.088e-5 | 0.403 |
INTERGENIC
|
TF binding site
mE1_TFBS_inv
|
|
3R | 10347864 | 3R_10347864_SNP [dm3] 3R_14522142_SNP [dm6] | A | T | 2.098e-5 | 0.403 |
INTRON
Pde6 & 1 other |
||
3R | 13002769 | 3R_13002769_SNP [dm3] 3R_17177047_SNP [dm6] | C | G | 2.104e-5 | 0.403 |
INTRON
Mur89F |
||
3R | 12997115 | 3R_12997115_SNP [dm3] 3R_17171393_SNP [dm6] | A | T | 2.159e-5 | 0.406 |
INTRON
Mur89F |
||
3L | 19043538 | 3L_19043538_SNP [dm3] 3L_19050438_SNP [dm6] | C | T | 2.207e-5 | 0.406 |
DOWNSTREAM
Acp76A INTERGENIC |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
3R | 13958095 | 3R_13958095_SNP [dm3] 3R_18132373_SNP [dm6] | A | G | 7.960e-7 | 0.45 |
SYNONYMOUS_CODING
sr |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
X | 20397786 | X_20397786_SNP [dm3] X_20526759_SNP [dm6] | T | C | 9.405e-7 | 0.45 |
UPSTREAM
CG42579 INTERGENIC |
||
3R | 5478605 | 3R_5478605_SNP [dm3] 3R_9652883_SNP [dm6] | A | C | 1.084e-6 | 0.45 |
SYNONYMOUS_CODING
CG43441 INTRON CG9492 |
||
3L | 20023565 | 3L_20023565_SNP [dm3] 3L_20030465_SNP [dm6] | T | C | 1.720e-6 | 0.45 |
INTERGENIC
|
||
3L | 7629387 | 3L_7629387_SNP [dm3] 3L_7636287_SNP [dm6] | G | A | 1.869e-6 | 0.45 |
SYNONYMOUS_CODING
CG33275 |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
2R | 1879241 | 2R_1879241_SNP [dm3] 2R_5991736_SNP [dm6] | T | C | 1.901e-6 | 0.45 |
INTRON
Src42A |
||
3R | 22746543 | 3R_22746543_SNP [dm3] 3R_26920821_SNP [dm6] | T | C | 2.069e-6 | 0.45 |
INTRON
sda |
||
X | 6334526 | X_6334526_SNP [dm3] X_6440493_SNP [dm6] | C | T | 2.101e-6 | 0.45 |
INTRON
CG42340 |
||
X | 6387069 | X_6387069_SNP [dm3] X_6493036_SNP [dm6] | T | A | 2.159e-6 | 0.45 |
INTRON
CG42340 |
||
2R | 8649956 | 2R_8649956_SNP [dm3] 2R_12762451_SNP [dm6] | C | T | 3.234e-6 | 0.607 |
SYNONYMOUS_CODING
CG12374 |
TF binding site
mE1_TFBS_cad mE1_TFBS_sens
|
|
3L | 13489463 | 3L_13489463_SNP [dm3] 3L_13496363_SNP [dm6] | T | C | 3.678e-6 | 0.627 |
INTRON
Tgi |
||
3L | 22112954 | 3L_22112954_SNP [dm3] 3L_22119854_SNP [dm6] | G | T | 4.129e-6 | 0.645 |
INTERGENIC
|
||
2R | 6449211 | 2R_6449211_SNP [dm3] 2R_10561706_SNP [dm6] | T | A | 4.969e-6 | 0.662 |
UTR_5_PRIME
psq |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 24991747 | 3R_24991747_SNP [dm3] 3R_29166025_SNP [dm6] | C | T | 5.043e-6 | 0.662 |
INTRON
CG11898 |
||
3L | 16269897 | 3L_16269897_SNP [dm3] 3L_16276797_SNP [dm6] | A | C | 5.581e-6 | 0.662 |
UPSTREAM
CG13065 INTERGENIC |
||
3L | 16267562 | 3L_16267562_MNP [dm3] 3L_16274462_MNP [dm6] | TTAT | CATC | 6.537e-6 | 0.662 |
DOWNSTREAM
CG13066 INTERGENIC |
||
3L | 5737017 | 3L_5737017_SNP [dm3] 3L_5743917_SNP [dm6] | A | T | 6.853e-6 | 0.662 |
UTR_3_PRIME
sif INTRON sif |
||
3L | 4781123 | 3L_4781123_SNP [dm3] 3L_4781123_SNP [dm6] | T | C | 6.894e-6 | 0.662 |
INTRON
RhoGEF64C |
||
2R | 19330882 | 2R_19330882_SNP [dm3] 2R_23443359_SNP [dm6] | C | T | 7.203e-6 | 0.662 |
UPSTREAM
CG43795 INTERGENIC |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 5444734 | 2R_5444734_SNP [dm3] 2R_9557229_SNP [dm6] | A | T | 7.425e-6 | 0.662 |
INTERGENIC
|
||
2R | 19330883 | 2R_19330883_SNP [dm3] 2R_23443360_SNP [dm6] | A | C | 7.615e-6 | 0.662 |
UPSTREAM
CG43795 INTERGENIC |
TF binding site
mE1_TFBS_chinmo
|
|
3R | 5079375 | 3R_5079375_SNP [dm3] 3R_9253653_SNP [dm6] | A | T | 7.770e-6 | 0.662 |
DOWNSTREAM
St2 EXON CR16735 |
||
3L | 16267567 | 3L_16267567_INS [dm3] 3L_16274467_INS [dm6] | G | CGCCCA | 8.609e-6 | 0.699 |
DOWNSTREAM
CG13066 INTERGENIC |
||
3L | 4780955 | 3L_4780955_SNP [dm3] 3L_4780955_SNP [dm6] | T | C | 8.940e-6 | 0.699 |
INTRON
RhoGEF64C |
||
3R | 11231015 | 3R_11231015_SNP [dm3] 3R_15405293_SNP [dm6] | C | G | 1.009e-5 | 0.754 |
NON_SYNONYMOUS_CODING
CG6125 |
||
X | 21083148 | X_21083148_SNP [dm3] X_21212121_SNP [dm6] | G | T | 1.071e-5 | 0.754 |
INTRON
CG32521 |
||
X | 6334543 | X_6334543_SNP [dm3] X_6440510_SNP [dm6] | C | T | 1.085e-5 | 0.754 |
INTRON
CG42340 |
||
X | 21083163 | X_21083163_SNP [dm3] X_21212136_SNP [dm6] | G | A | 1.214e-5 | 0.778 |
INTRON
CG32521 |
||
3R | 22746544 | 3R_22746544_SNP [dm3] 3R_26920822_SNP [dm6] | A | C | 1.270e-5 | 0.778 |
INTRON
sda |
||
2R | 15297293 | 2R_15297293_SNP [dm3] 2R_19409788_SNP [dm6] | T | A | 1.388e-5 | 0.778 |
INTRON
hts |
||
3L | 18478116 | 3L_18478116_SNP [dm3] 3L_18485016_SNP [dm6] | G | A | 1.388e-5 | 0.778 |
DOWNSTREAM
AstC-R2 INTERGENIC |
TF binding site
mE1_TFBS_kn
|
|
3R | 27091380 | 3R_27091380_SNP [dm3] 3R_31265658_SNP [dm6] | C | G | 1.411e-5 | 0.778 |
UPSTREAM
ppk24 INTERGENIC |
||
3R | 26116685 | 3R_26116685_SNP [dm3] 3R_30290963_SNP [dm6] | T | C | 1.437e-5 | 0.778 |
INTRON
hdc |
||
X | 21083139 | X_21083139_SNP [dm3] X_21212112_SNP [dm6] | T | A | 1.480e-5 | 0.778 |
INTRON
CG32521 |
||
2L | 12737682 | 2L_12737682_SNP [dm3] 2L_12737682_SNP [dm6] | T | C | 1.489e-5 | 0.778 |
INTRON
MRP |
TF binding site
mE1_TFBS_cad
|
|
2L | 17641292 | 2L_17641292_INS [dm3] 2L_17641292_INS [dm6] | A | ATTCCTAGAACGAGGAATAT... | 1.493e-5 | 0.778 |
INTERGENIC
|
||
X | 6387107 | X_6387107_SNP [dm3] X_6493074_SNP [dm6] | T | A | 1.560e-5 | 0.791 |
INTRON
CG42340 |
||
3L | 10773187 | 3L_10773187_SNP [dm3] 3L_10780087_SNP [dm6] | A | G | 1.608e-5 | 0.794 |
INTERGENIC
|
||
3L | 16267559 | 3L_16267559_SNP [dm3] 3L_16274459_SNP [dm6] | T | C | 1.826e-5 | 0.799 |
DOWNSTREAM
CG13066 INTERGENIC |
||
3R | 26116531 | 3R_26116531_SNP [dm3] 3R_30290809_SNP [dm6] | A | G | 1.875e-5 | 0.799 |
INTRON
hdc |
||
3L | 12262684 | 3L_12262684_DEL [dm3] 3L_12269584_DEL [dm6] | GG | G | 1.903e-5 | 0.799 |
UTR_3_PRIME
CG32100 & 1 other DOWNSTREAM Pbgs |
||
2R | 6542807 | 2R_6542807_SNP [dm3] 2R_10655302_SNP [dm6] | A | T | 1.923e-5 | 0.799 |
INTERGENIC
|
||
2R | 10711014 | 2R_10711014_SNP [dm3] 2R_14823509_SNP [dm6] | T | C | 1.972e-5 | 0.799 |
DOWNSTREAM
CR45329 INTERGENIC |
||
2R | 15297420 | 2R_15297420_SNP [dm3] 2R_19409915_SNP [dm6] | A | G | 2.002e-5 | 0.799 |
SYNONYMOUS_CODING
hts |
||
X | 18909633 | X_18909633_SNP [dm3] X_19015600_SNP [dm6] | T | A | 2.032e-5 | 0.799 |
INTRON
CG43759 |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 12718772 | 3L_12718772_SNP [dm3] 3L_12725672_SNP [dm6] | A | T | 2.093e-5 | 0.799 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3L | 18479432 | 3L_18479432_SNP [dm3] 3L_18486332_SNP [dm6] | C | G | 2.102e-5 | 0.799 |
UTR_3_PRIME
AstC-R2 DOWNSTREAM AstC-R2 |
||
3R | 9148240 | 3R_9148240_SNP [dm3] 3R_13322518_SNP [dm6] | G | A | 2.108e-5 | 0.799 |
INTERGENIC
|
||
3R | 5731608 | 3R_5731608_SNP [dm3] 3R_9905886_SNP [dm6] | A | G | 2.131e-5 | 0.799 |
INTRON
Glut4EF |
enhancer
mE1_CBP_Enhancers
TF binding site mE1_TFBS_HSA mE1_TFBS_inv |
|
2L | 3345713 | 2L_3345713_SNP [dm3] 2L_3345713_SNP [dm6] | A | G | 2.163e-5 | 0.799 |
INTRON
E23 |
TF binding site
mE1_TFBS_cnc
|
|
2L | 11397516 | 2L_11397516_SNP [dm3] 2L_11397516_SNP [dm6] | C | G | 2.358e-5 | 0.799 |
INTERGENIC
|
regulatory region
REDfly_CRMs
|
|
2R | 1204590 | 2R_1204590_SNP [dm3] 2R_5317085_SNP [dm6] | T | C | 2.374e-5 | 0.799 |
INTRON
sxc |
transposable element
FlyBase
|
|
3R | 14905850 | 3R_14905850_SNP [dm3] 3R_19080128_SNP [dm6] | G | T | 2.396e-5 | 0.799 |
INTRON
cdi |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
|
|
X | 10093495 | X_10093495_SNP [dm3] X_10199462_SNP [dm6] | C | G | 2.439e-5 | 0.799 |
INTRON
CR44894 |
||
3L | 15193796 | 3L_15193796_SNP [dm3] 3L_15200696_SNP [dm6] | G | C | 2.443e-5 | 0.799 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Kr mE1_TFBS_Ubx
|
|
2R | 19330915 | 2R_19330915_SNP [dm3] 2R_23443392_SNP [dm6] | C | T | 2.471e-5 | 0.799 |
UPSTREAM
CG43795 INTERGENIC |
TF binding site
mE1_TFBS_chinmo
|
|
3R | 8147603 | 3R_8147603_SNP [dm3] 3R_12321881_SNP [dm6] | G | A | 2.488e-5 | 0.799 |
DOWNSTREAM
tRNA:CR31432 INTERGENIC |
||
2R | 17286540 | 2R_17286540_SNP [dm3] 2R_21399035_SNP [dm6] | G | A | 2.489e-5 | 0.799 |
SYNONYMOUS_CODING
Sdc INTRON Sdc |
||
3L | 24197591 | 3L_24197591_SNP [dm3] 3L_24204491_SNP [dm6] | C | T | 2.544e-5 | 0.799 |
INTRON
Snap25 |
||
X | 19420639 | X_19420639_SNP [dm3] X_19526606_SNP [dm6] | C | T | 2.712e-5 | 0.799 |
DOWNSTREAM
CoRest INTRON CoRest |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
3L | 4791445 | 3L_4791445_SNP [dm3] 3L_4791445_SNP [dm6] | T | A | 2.729e-5 | 0.799 |
NON_SYNONYMOUS_CODING
RhoGEF64C |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 6934172 | 2R_6934172_SNP [dm3] 2R_11046667_SNP [dm6] | A | G | 2.747e-5 | 0.799 |
INTRON
luna |
||
3L | 14641444 | 3L_14641444_SNP [dm3] 3L_14648344_SNP [dm6] | C | G | 2.882e-5 | 0.799 |
INTRON
dlp |
TF binding site
BDTNP1_TFBS_sna mE1_TFBS_HSA
|
|
3R | 9653593 | 3R_9653593_SNP [dm3] 3R_13827871_SNP [dm6] | T | G | 2.898e-5 | 0.799 |
UTR_5_PRIME
Mst87F UPSTREAM CR43300 & 1 other |
regulatory region
REDfly_CRMs
|
|
X | 5299887 | X_5299887_SNP [dm3] X_5405854_SNP [dm6] | G | A | 3.008e-5 | 0.799 |
SPLICE_SITE_REGION
NAAT1 DOWNSTREAM SK INTRON NAAT1 |
||
3R | 11231035 | 3R_11231035_INS [dm3] 3R_15405313_INS [dm6] | A | AGGGGGAAAA | 3.214e-5 | 0.799 |
SPLICE_SITE_REGION
CG6125 INTRON CG6125 |
||
X | 18909619 | X_18909619_SNP [dm3] X_19015586_SNP [dm6] | A | G | 3.302e-5 | 0.799 |
INTRON
CG43759 |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 4176822 | 3L_4176822_SNP [dm3] 3L_4176822_SNP [dm6] | C | T | 3.359e-5 | 0.799 |
INTRON
CG18675 & 1 other |
||
3L | 4176830 | 3L_4176830_SNP [dm3] 3L_4176830_SNP [dm6] | G | C | 3.359e-5 | 0.799 |
INTRON
CG18675 & 1 other |
||
3L | 16906443 | 3L_16906443_SNP [dm3] 3L_16913343_SNP [dm6] | C | T | 3.378e-5 | 0.799 |
SYNONYMOUS_CODING
Lmpt |
||
2L | 19976981 | 2L_19976981_SNP [dm3] 2L_19976981_SNP [dm6] | C | A | 3.402e-5 | 0.799 |
INTRON
CG43861 |
||
3R | 14544361 | 3R_14544361_SNP [dm3] 3R_18718639_SNP [dm6] | A | C | 3.432e-5 | 0.799 |
UTR_3_PRIME
VAChT INTRON Cha |
||
3R | 5760867 | 3R_5760867_SNP [dm3] 3R_9935145_SNP [dm6] | C | T | 3.438e-5 | 0.799 |
INTRON
Glut4EF |
||
2L | 12737835 | 2L_12737835_SNP [dm3] 2L_12737835_SNP [dm6] | G | A | 3.539e-5 | 0.799 |
INTRON
MRP |
TF binding site
mE1_TFBS_cad
|
|
3R | 23429248 | 3R_23429248_SNP [dm3] 3R_27603526_SNP [dm6] | C | A | 3.613e-5 | 0.799 |
INTRON
dsd |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 26116455 | 3R_26116455_SNP [dm3] 3R_30290733_SNP [dm6] | A | C | 3.654e-5 | 0.799 |
INTRON
hdc |
||
3R | 16431274 | 3R_16431274_INS [dm3] 3R_20605552_INS [dm6] | C | CGCC | 3.686e-5 | 0.799 |
UPSTREAM
tRNA:CR31506 INTRON bon |
TF binding site
mE1_TFBS_cad
|
|
3L | 21641346 | 3L_21641346_SNP [dm3] 3L_21648246_SNP [dm6] | G | C | 3.690e-5 | 0.799 |
INTRON
CG43980 |
||
X | 10343624 | X_10343624_SNP [dm3] X_10449591_SNP [dm6] | A | G | 3.831e-5 | 0.799 |
INTRON
CG32683 |
||
3L | 5646627 | 3L_5646627_SNP [dm3] 3L_5653527_SNP [dm6] | C | T | 4.060e-5 | 0.799 |
INTERGENIC
|
silencer
mE1_HDAC_PRE
TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl |
|
2L | 21164575 | 2L_21164575_SNP [dm3] 2L_21164575_SNP [dm6] | C | T | 4.196e-5 | 0.799 |
SYNONYMOUS_CODING
CG9246 UPSTREAM CR44910 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
3R | 19138838 | 3R_19138838_SNP [dm3] 3R_23313116_SNP [dm6] | A | G | 4.201e-5 | 0.799 |
INTRON
pnt |
||
3L | 16261776 | 3L_16261776_SNP [dm3] 3L_16268676_SNP [dm6] | C | T | 4.207e-5 | 0.799 |
UPSTREAM
CG4950 & 1 other INTERGENIC |
||
3R | 21650153 | 3R_21650153_SNP [dm3] 3R_25824431_SNP [dm6] | C | T | 4.232e-5 | 0.799 |
EXON
CR44949 |
||
3L | 4789933 | 3L_4789933_SNP [dm3] 3L_4789933_SNP [dm6] | G | C | 4.246e-5 | 0.799 |
SYNONYMOUS_CODING
RhoGEF64C |
TF binding site
mE1_TFBS_chinmo
|
|
X | 21083199 | X_21083199_SNP [dm3] X_21212172_SNP [dm6] | A | G | 4.377e-5 | 0.799 |
INTRON
CG32521 |
||
X | 2109120 | X_2109120_SNP [dm3] X_2215087_SNP [dm6] | G | A | 4.453e-5 | 0.799 |
SYNONYMOUS_CODING
Vinc |
TF binding site
BDTNP1_TFBS_sna mE1_TFBS_chinmo
|
|
2R | 7534015 | 2R_7534015_SNP [dm3] 2R_11646510_SNP [dm6] | C | G | 4.604e-5 | 0.799 |
UPSTREAM
CG9003 INTRON CG9003 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3R | 21650184 | 3R_21650184_SNP [dm3] 3R_25824462_SNP [dm6] | G | A | 4.651e-5 | 0.799 |
EXON
CR44949 |
||
2L | 12797629 | 2L_12797629_SNP [dm3] 2L_12797629_SNP [dm6] | G | C | 4.661e-5 | 0.799 |
INTERGENIC
|
||
X | 4560398 | X_4560398_SNP [dm3] X_4666365_SNP [dm6] | G | A | 4.689e-5 | 0.799 |
DOWNSTREAM
rap INTRON CG3009 |
||
2R | 16530589 | 2R_16530589_SNP [dm3] 2R_20643084_SNP [dm6] | A | G | 4.704e-5 | 0.799 |
SYNONYMOUS_CODING
CG33786 UTR_3_PRIME CG33785 UPSTREAM DMAP1 DOWNSTREAM CG11110 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
|
|
3R | 5078912 | 3R_5078912_DEL [dm3] 3R_9253190_DEL [dm6] | ACATAAAATTAACAAGGTTT... | TAAACGAATAAACGAATATT... | 4.714e-5 | 0.799 |
UTR_3_PRIME
St2 UPSTREAM CR16735 DOWNSTREAM St2 INTRAGENIC St2 INTERGENIC |
||
3R | 9429465 | 3R_9429465_SNP [dm3] 3R_13603743_SNP [dm6] | G | A | 4.809e-5 | 0.799 |
INTERGENIC
|
||
3L | 12712522 | 3L_12712522_SNP [dm3] 3L_12719422_SNP [dm6] | A | G | 4.878e-5 | 0.799 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da
|
|
X | 19443933 | X_19443933_DEL [dm3] X_19549900_DEL [dm6] | TAAATA | T | 4.885e-5 | 0.799 |
INTERGENIC
|
||
2R | 8785712 | 2R_8785712_SNP [dm3] 2R_12898207_SNP [dm6] | G | C | 4.956e-5 | 0.799 |
INTRON
vg |
TF binding site
mE1_TFBS_cad mE1_TFBS_chinmo
|
|
2R | 15298962 | 2R_15298962_SNP [dm3] 2R_19411457_SNP [dm6] | G | A | 5.006e-5 | 0.799 |
UTR_5_PRIME
hts UPSTREAM hts INTRON hts |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
|
|
X | 14108017 | X_14108017_INS [dm3] X_14213984_INS [dm6] | C | CTT | 5.007e-5 | 0.799 |
INTRON
l_1_G0007 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 14177225 | 3L_14177225_SNP [dm3] 3L_14184125_SNP [dm6] | C | G | 5.070e-5 | 0.799 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|