©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2R | 13561574 | 2R_13561574_SNP [dm3] 2R_17674069_SNP [dm6] | A | G | 9.871e-7 | 0.854 |
UTR_3_PRIME
Sema-1b |
||
3R | 13810644 | 3R_13810644_DEL [dm3] 3R_17984922_DEL [dm6] | CGGTCCGAAATG... | C | 1.656e-6 | 0.854 |
INTRON
cpo |
||
3L | 14081572 | 3L_14081572_SNP [dm3] 3L_14088472_SNP [dm6] | C | A | 2.462e-6 | 0.854 |
INTERGENIC
|
||
3L | 14111118 | 3L_14111118_SNP [dm3] 3L_14118018_SNP [dm6] | G | A | 3.619e-6 | 0.854 |
INTRON
Sox21b |
||
3L | 10653279 | 3L_10653279_SNP [dm3] 3L_10660179_SNP [dm6] | C | T | 4.110e-6 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 9283250 | 3L_9283250_SNP [dm3] 3L_9290150_SNP [dm6] | T | G | 5.009e-6 | 0.854 |
INTERGENIC
|
||
3R | 25613227 | 3R_25613227_SNP [dm3] 3R_29787505_SNP [dm6] | T | C | 5.201e-6 | 0.854 |
INTRON
kay |
||
3R | 18997586 | 3R_18997586_SNP [dm3] 3R_23171864_SNP [dm6] | G | T | 6.474e-6 | 0.854 |
INTRON
Irk1 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_inv
|
|
3L | 14081579 | 3L_14081579_SNP [dm3] 3L_14088479_SNP [dm6] | T | C | 6.550e-6 | 0.854 |
INTERGENIC
|
||
3L | 16207811 | 3L_16207811_SNP [dm3] 3L_16214711_SNP [dm6] | C | G | 6.658e-6 | 0.854 |
DOWNSTREAM
CR43891 INTRON CG13073 |
||
3R | 9288190 | 3R_9288190_SNP [dm3] 3R_13462468_SNP [dm6] | C | T | 8.135e-6 | 0.854 |
INTRON
CR17025 & 1 other |
TF binding site
mE1_TFBS_cad
|
|
3R | 4675435 | 3R_4675435_SNP [dm3] 3R_8849713_SNP [dm6] | A | C | 9.617e-6 | 0.854 |
INTRON
pyd |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv
|
|
2R | 12871337 | 2R_12871337_SNP [dm3] 2R_16983832_SNP [dm6] | C | T | 9.708e-6 | 0.854 |
INTRON
Cbp53E |
||
3L | 2628044 | 3L_2628044_SNP [dm3] 3L_2628044_SNP [dm6] | T | G | 9.841e-6 | 0.854 |
INTRON
Pxn |
TF binding site
BDTNP1_TFBS_sna mE1_TFBS_HSA
|
|
3R | 17684104 | 3R_17684104_SNP [dm3] 3R_21858382_SNP [dm6] | G | C | 1.015e-5 | 0.854 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 12947745 | 2L_12947745_SNP [dm3] 2L_12947745_SNP [dm6] | G | A | 1.084e-5 | 0.854 |
INTERGENIC
|
||
3L | 9781587 | 3L_9781587_SNP [dm3] 3L_9788487_SNP [dm6] | A | G | 1.092e-5 | 0.854 |
UTR_3_PRIME
Zasp67 |
||
3R | 9425324 | 3R_9425324_SNP [dm3] 3R_13599602_SNP [dm6] | T | G | 1.095e-5 | 0.854 |
INTERGENIC
|
||
3R | 23733511 | 3R_23733511_SNP [dm3] 3R_27907789_SNP [dm6] | C | T | 1.104e-5 | 0.854 |
INTERGENIC
|
||
X | 15432276 | X_15432276_SNP [dm3] X_15538243_SNP [dm6] | C | T | 1.118e-5 | 0.854 |
INTRON
Ac13E |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 3082230 | 2R_3082230_SNP [dm3] 2R_7194725_SNP [dm6] | G | C | 1.204e-5 | 0.854 |
INTRON
pk |
||
2L | 21321520 | 2L_21321520_SNP [dm3] 2L_21321520_SNP [dm6] | C | A | 1.321e-5 | 0.854 |
INTERGENIC
|
||
2L | 3915988 | 2L_3915988_SNP [dm3] 2L_3915988_SNP [dm6] | C | T | 1.338e-5 | 0.854 |
INTRON
fred |
||
2R | 17123050 | 2R_17123050_SNP [dm3] 2R_21235545_SNP [dm6] | A | G | 1.448e-5 | 0.854 |
INTRON
ASPP |
||
2L | 3014626 | 2L_3014626_SNP [dm3] 2L_3014626_SNP [dm6] | A | T | 1.530e-5 | 0.854 |
INTRON
CG17265 |
||
3R | 9288094 | 3R_9288094_SNP [dm3] 3R_13462372_SNP [dm6] | C | T | 1.531e-5 | 0.854 |
INTRON
CR17025 & 1 other |
TF binding site
mE1_TFBS_cad
|
|
3L | 16207910 | 3L_16207910_SNP [dm3] 3L_16214810_SNP [dm6] | T | G | 1.538e-5 | 0.854 |
DOWNSTREAM
CR43891 INTRON CG13073 |
||
3R | 13810624 | 3R_13810624_SNP [dm3] 3R_17984902_SNP [dm6] | A | G | 1.552e-5 | 0.854 |
INTRON
cpo |
||
2L | 3014628 | 2L_3014628_SNP [dm3] 2L_3014628_SNP [dm6] | A | T | 1.563e-5 | 0.854 |
INTRON
CG17265 |
||
3R | 18839607 | 3R_18839607_INS [dm3] 3R_23013885_INS [dm6] | T | TT | 1.595e-5 | 0.854 |
INTRON
CG6688 |
TF binding site
mE1_TFBS_zfh1
|
|
2R | 3003748 | 2R_3003748_SNP [dm3] 2R_7116243_SNP [dm6] | C | A | 1.652e-5 | 0.854 |
INTRON
esn |
TF binding site
mE1_TFBS_HSA mE1_TFBS_inv
|
|
3L | 16207843 | 3L_16207843_SNP [dm3] 3L_16214743_SNP [dm6] | A | G | 1.677e-5 | 0.854 |
DOWNSTREAM
CR43891 INTRON CG13073 |
||
2R | 18767017 | 2R_18767017_SNP [dm3] 2R_22879494_SNP [dm6] | T | A | 1.740e-5 | 0.854 |
INTRON
PIP5K59B |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 17896788 | 2R_17896788_SNP [dm3] 2R_22009283_SNP [dm6] | C | T | 1.742e-5 | 0.854 |
INTRON
CG34370 |
||
3L | 10653291 | 3L_10653291_SNP [dm3] 3L_10660191_SNP [dm6] | A | T | 1.751e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 10653268 | 3L_10653268_SNP [dm3] 3L_10660168_SNP [dm6] | T | A | 1.777e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
2L | 11787494 | 2L_11787494_SNP [dm3] 2L_11787494_SNP [dm6] | A | G | 1.778e-5 | 0.854 |
UPSTREAM
CG14931 INTERGENIC |
||
3R | 9288121 | 3R_9288121_SNP [dm3] 3R_13462399_SNP [dm6] | T | C | 1.837e-5 | 0.854 |
INTRON
CR17025 & 1 other |
TF binding site
mE1_TFBS_cad
|
|
3L | 10653284 | 3L_10653284_SNP [dm3] 3L_10660184_SNP [dm6] | A | G | 1.925e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 16207787 | 3L_16207787_SNP [dm3] 3L_16214687_SNP [dm6] | G | T | 2.072e-5 | 0.854 |
DOWNSTREAM
CR43891 INTRON CG13073 |
||
X | 17808842 | X_17808842_SNP [dm3] X_17914809_SNP [dm6] | G | A | 2.073e-5 | 0.854 |
INTRON
CG6847 |
||
3L | 16207785 | 3L_16207785_SNP [dm3] 3L_16214685_SNP [dm6] | C | T | 2.077e-5 | 0.854 |
DOWNSTREAM
CR43891 INTRON CG13073 |
||
3L | 16207805 | 3L_16207805_SNP [dm3] 3L_16214705_SNP [dm6] | A | G | 2.083e-5 | 0.854 |
DOWNSTREAM
CR43891 INTRON CG13073 |
||
3L | 1840816 | 3L_1840816_SNP [dm3] 3L_1840816_SNP [dm6] | A | G | 2.088e-5 | 0.854 |
SYNONYMOUS_CODING
Cpr62Bc |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3R | 18839610 | 3R_18839610_SNP [dm3] 3R_23013888_SNP [dm6] | A | C | 2.109e-5 | 0.854 |
INTRON
CG6688 |
TF binding site
mE1_TFBS_zfh1
|
|
X | 21896520 | X_21896520_SNP [dm3] X_22494684_SNP [dm6] | G | C | 2.164e-5 | 0.854 |
INTRON
l_1_G0196 |
transposable element
FlyBase
|
|
3L | 10273929 | 3L_10273929_INS [dm3] 3L_10280829_INS [dm6] | G | GTAAG | 2.199e-5 | 0.854 |
INTERGENIC
|
||
3R | 20985484 | 3R_20985484_SNP [dm3] 3R_25159762_SNP [dm6] | G | A | 2.300e-5 | 0.854 |
INTERGENIC
|
||
3R | 9288187 | 3R_9288187_SNP [dm3] 3R_13462465_SNP [dm6] | T | C | 2.306e-5 | 0.854 |
INTRON
CR17025 & 1 other |
TF binding site
mE1_TFBS_cad
|
|
3L | 3044877 | 3L_3044877_SNP [dm3] 3L_3044877_SNP [dm6] | T | A | 2.359e-5 | 0.854 |
DOWNSTREAM
Jafrac2 INTRON scramb2 |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 6618615 | 2R_6618615_SNP [dm3] 2R_10731110_SNP [dm6] | C | A | 2.451e-5 | 0.854 |
UPSTREAM
CG7220 & 1 other INTRON CG12338 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
2L | 3915958 | 2L_3915958_SNP [dm3] 2L_3915958_SNP [dm6] | T | C | 2.492e-5 | 0.854 |
INTRON
fred |
||
3L | 2810144 | 3L_2810144_SNP [dm3] 3L_2810144_SNP [dm6] | A | T | 2.562e-5 | 0.854 |
INTRON
CG43444 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
|
|
2R | 18449980 | 2R_18449980_SNP [dm3] 2R_22562475_SNP [dm6] | A | T | 2.677e-5 | 0.854 |
UPSTREAM
px DOWNSTREAM dnr1 INTRON CG11362 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
2R | 18449974 | 2R_18449974_DEL [dm3] 2R_22562469_DEL [dm6] | TAATG | T | 2.683e-5 | 0.854 |
UPSTREAM
px DOWNSTREAM dnr1 INTRON CG11362 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
2L | 12947726 | 2L_12947726_SNP [dm3] 2L_12947726_SNP [dm6] | G | A | 2.718e-5 | 0.854 |
INTERGENIC
|
||
3L | 16308014 | 3L_16308014_SNP [dm3] 3L_16314914_SNP [dm6] | C | T | 2.811e-5 | 0.854 |
SYNONYMOUS_CODING
CG13062 |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2L | 14416611 | 2L_14416611_INS [dm3] 2L_14416611_INS [dm6] | A | TCAC | 2.821e-5 | 0.854 |
DOWNSTREAM
Pburs INTERGENIC |
TF binding site
BDTNP1_TFBS_twi
|
|
2L | 8508300 | 2L_8508300_SNP [dm3] 2L_8508300_SNP [dm6] | T | G | 2.905e-5 | 0.854 |
DOWNSTREAM
CG13096 INTERGENIC |
||
3R | 23199096 | 3R_23199096_SNP [dm3] 3R_27373374_SNP [dm6] | T | A | 2.961e-5 | 0.854 |
DOWNSTREAM
CG42534 INTERGENIC |
||
2L | 15858518 | 2L_15858518_SNP [dm3] 2L_15858518_SNP [dm6] | C | G | 3.032e-5 | 0.854 |
INTERGENIC
|
||
3L | 10653278 | 3L_10653278_SNP [dm3] 3L_10660178_SNP [dm6] | C | T | 3.036e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3L | 10653161 | 3L_10653161_SNP [dm3] 3L_10660061_SNP [dm6] | C | A | 3.143e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 9287561 | 3R_9287561_SNP [dm3] 3R_13461839_SNP [dm6] | A | T | 3.176e-5 | 0.854 |
INTRON
CR17025 & 1 other |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 24551445 | 3R_24551445_SNP [dm3] 3R_28725723_SNP [dm6] | C | T | 3.179e-5 | 0.854 |
SYNONYMOUS_CODING
htt |
||
3L | 10653214 | 3L_10653214_DEL [dm3] 3L_10660114_DEL [dm6] | ATTTTCATTTG... | A | 3.285e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 23158297 | 3R_23158297_SNP [dm3] 3R_27332575_SNP [dm6] | A | G | 3.381e-5 | 0.854 |
INTERGENIC
|
||
3R | 10348692 | 3R_10348692_SNP [dm3] 3R_14522970_SNP [dm6] | G | A | 3.407e-5 | 0.854 |
NON_SYNONYMOUS_CODING
Cyp313a1 INTRON Pde6 |
||
2R | 17896781 | 2R_17896781_SNP [dm3] 2R_22009276_SNP [dm6] | T | C | 3.453e-5 | 0.854 |
INTRON
CG34370 |
||
3R | 26466103 | 3R_26466103_SNP [dm3] 3R_30640381_SNP [dm6] | G | T | 3.471e-5 | 0.854 |
INTERGENIC
|
||
3L | 15776679 | 3L_15776679_SNP [dm3] 3L_15783579_SNP [dm6] | C | G | 3.598e-5 | 0.854 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da
|
|
2L | 11046453 | 2L_11046453_SNP [dm3] 2L_11046453_SNP [dm6] | G | T | 3.614e-5 | 0.854 |
INTRON
Samuel |
||
2L | 11046221 | 2L_11046221_SNP [dm3] 2L_11046221_SNP [dm6] | A | G | 3.697e-5 | 0.854 |
INTRON
Samuel |
||
2R | 15431754 | 2R_15431754_SNP [dm3] 2R_19544249_SNP [dm6] | G | T | 3.769e-5 | 0.854 |
INTRON
sm |
||
2R | 3007614 | 2R_3007614_SNP [dm3] 2R_7120109_SNP [dm6] | T | A | 3.831e-5 | 0.854 |
INTRON
esn |
||
2R | 2999617 | 2R_2999617_DEL [dm3] 2R_7112112_DEL [dm6] | GCAGTG | G | 3.845e-5 | 0.854 |
INTRON
esn |
TF binding site
mE1_TFBS_inv
|
|
3R | 10694892 | 3R_10694892_SNP [dm3] 3R_14869170_SNP [dm6] | G | T | 3.910e-5 | 0.854 |
INTRON
btsz |
||
2R | 12891597 | 2R_12891597_SNP [dm3] 2R_17004092_SNP [dm6] | C | T | 3.938e-5 | 0.854 |
SYNONYMOUS_CODING
NiPp1 DOWNSTREAM CG6796 |
TF binding site
mE1_TFBS_sens
|
|
2R | 14494432 | 2R_14494432_SNP [dm3] 2R_18606927_SNP [dm6] | A | C | 3.953e-5 | 0.854 |
INTRON
GEFmeso |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 20371006 | 3R_20371006_SNP [dm3] 3R_24545284_SNP [dm6] | A | G | 4.271e-5 | 0.854 |
INTRON
Esyt2 |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad
|
|
3R | 1515961 | 3R_1515961_SNP [dm3] 3R_5690239_SNP [dm6] | G | A | 4.278e-5 | 0.854 |
DOWNSTREAM
CG2104 INTRON plx |
||
2R | 11119735 | 2R_11119735_SNP [dm3] 2R_15232230_SNP [dm6] | T | G | 4.331e-5 | 0.854 |
INTRON
Fs EXON CR44370 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
|
|
2L | 16495315 | 2L_16495315_SNP [dm3] 2L_16495315_SNP [dm6] | C | T | 4.394e-5 | 0.854 |
INTRON
Tpr2 |
TF binding site
mE1_TFBS_bab1 mE1_TFBS_cad
|
|
3L | 10653170 | 3L_10653170_DEL [dm3] 3L_10660070_DEL [dm6] | AGATTAAATTTAA... | A | 4.413e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 26118740 | 3R_26118740_SNP [dm3] 3R_30293018_SNP [dm6] | C | G | 4.420e-5 | 0.854 |
INTRON
hdc |
||
2R | 18449987 | 2R_18449987_SNP [dm3] 2R_22562482_SNP [dm6] | C | T | 4.529e-5 | 0.854 |
UPSTREAM
px DOWNSTREAM dnr1 INTRON CG11362 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Ubx
|
|
3L | 4994420 | 3L_4994420_SNP [dm3] 3L_4994420_SNP [dm6] | G | A | 4.564e-5 | 0.854 |
SYNONYMOUS_CODING
CG32232 INTRON Con |
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 18515860 | 2R_18515860_SNP [dm3] 2R_22628355_SNP [dm6] | G | T | 4.574e-5 | 0.854 |
SPLICE_SITE_REGION
CG33143 INTRON CG33143 |
||
3L | 10653293 | 3L_10653293_SNP [dm3] 3L_10660193_SNP [dm6] | T | A | 4.616e-5 | 0.854 |
UPSTREAM
CG32066 INTRON CG32066 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3R | 9350566 | 3R_9350566_SNP [dm3] 3R_13524844_SNP [dm6] | C | A | 4.650e-5 | 0.854 |
INTERGENIC
|
||
3R | 10318496 | 3R_10318496_INS [dm3] 3R_14492774_INS [dm6] | T | TTAGATTAGATAGATAGATA... | 4.746e-5 | 0.854 |
INTERGENIC
|
||
2L | 3915876 | 2L_3915876_SNP [dm3] 2L_3915876_SNP [dm6] | T | A | 4.841e-5 | 0.854 |
INTRON
fred |
||
2R | 16325970 | 2R_16325970_SNP [dm3] 2R_20438465_SNP [dm6] | A | G | 4.968e-5 | 0.854 |
INTRON
CG12484 |
||
2L | 9138875 | 2L_9138875_SNP [dm3] 2L_9138875_SNP [dm6] | T | C | 5.017e-5 | 0.854 |
INTRON
CG32982 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 6890138 | 2L_6890138_SNP [dm3] 2L_6890138_SNP [dm6] | A | G | 5.074e-5 | 0.854 |
INTRON
Nlg2 |
||
2R | 9843555 | 2R_9843555_INS [dm3] 2R_13956050_INS [dm6] | T | TTGAT | 5.083e-5 | 0.854 |
UPSTREAM
AGO1 DOWNSTREAM mRpL53 & 1 other INTRON AGO1 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_inv
|
|
3R | 23199080 | 3R_23199080_SNP [dm3] 3R_27373358_SNP [dm6] | C | T | 5.083e-5 | 0.854 |
DOWNSTREAM
CG42534 INTERGENIC |
||
X | 21896577 | X_21896577_SNP [dm3] X_22494741_SNP [dm6] | T | C | 5.106e-5 | 0.854 |
INTRON
l_1_G0196 |
transposable element
FlyBase
|
|
2L | 4432965 | 2L_4432965_SNP [dm3] 2L_4432965_SNP [dm6] | A | C | 5.170e-5 | 0.854 |
UPSTREAM
CG34177 & 1 other INTRON CG15431 |
||
3R | 18839629 | 3R_18839629_SNP [dm3] 3R_23013907_SNP [dm6] | T | A | 5.251e-5 | 0.854 |
INTRON
CG6688 |
TF binding site
mE1_TFBS_zfh1
|
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
2R | 13561574 | 2R_13561574_SNP [dm3] 2R_17674069_SNP [dm6] | A | G | 8.646e-8 | 0.162 |
UTR_3_PRIME
Sema-1b |
||
3R | 13810644 | 3R_13810644_DEL [dm3] 3R_17984922_DEL [dm6] | CGGTCCGAAATG... | C | 2.001e-7 | 0.188 |
INTRON
cpo |
||
3R | 13810624 | 3R_13810624_SNP [dm3] 3R_17984902_SNP [dm6] | A | G | 4.103e-7 | 0.257 |
INTRON
cpo |
||
X | 19357777 | X_19357777_SNP [dm3] X_19463744_SNP [dm6] | G | A | 1.537e-6 | 0.71 |
INTRON
kek5 |
||
2L | 16359849 | 2L_16359849_INS [dm3] 2L_16359849_INS [dm6] | C | CGC | 1.962e-6 | 0.71 |
INTERGENIC
|
||
X | 4704468 | X_4704468_DEL [dm3] X_4810435_DEL [dm6] | TT | T | 2.271e-6 | 0.71 |
INTERGENIC
|
||
3L | 9597366 | 3L_9597366_SNP [dm3] 3L_9604266_SNP [dm6] | T | A | 3.638e-6 | 0.92 |
INTRON
CG3280 |
||
3L | 17999284 | 3L_17999284_SNP [dm3] 3L_18006184_SNP [dm6] | A | T | 4.201e-6 | 0.92 |
INTRON
Eip75B |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
X | 7118473 | X_7118473_SNP [dm3] X_7224440_SNP [dm6] | C | G | 4.417e-6 | 0.92 |
INTRON
CR44357 & 1 other |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
|
|
2R | 19414076 | 2R_19414076_SNP [dm3] 2R_23526553_SNP [dm6] | G | C | 6.174e-6 | 0.939 |
SYNONYMOUS_CODING
mi |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
|
|
2L | 15410494 | 2L_15410494_DEL [dm3] 2L_15410494_DEL [dm6] | GGCA | G | 7.386e-6 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
2R | 6129086 | 2R_6129086_INS [dm3] 2R_10241581_INS [dm6] | A | ACATATATAAAAGGA... | 8.106e-6 | 0.939 |
INTRON
Hdc |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_twi
|
|
3L | 10920558 | 3L_10920558_SNP [dm3] 3L_10927458_SNP [dm6] | A | G | 8.367e-6 | 0.939 |
INTERGENIC
|
||
2L | 15410474 | 2L_15410474_INS [dm3] 2L_15410474_INS [dm6] | T | TGAAA | 8.446e-6 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
3R | 10369570 | 3R_10369570_INS [dm3] 3R_14543848_INS [dm6] | C | CAT | 8.462e-6 | 0.939 |
INTRON
Pde6 |
||
3L | 16875753 | 3L_16875753_SNP [dm3] 3L_16882653_SNP [dm6] | T | G | 8.958e-6 | 0.939 |
INTRON
Lmpt |
||
2R | 2999617 | 2R_2999617_DEL [dm3] 2R_7112112_DEL [dm6] | GCAGTG | G | 9.436e-6 | 0.939 |
INTRON
esn |
TF binding site
mE1_TFBS_inv
|
|
3L | 16875752 | 3L_16875752_SNP [dm3] 3L_16882652_SNP [dm6] | T | G | 9.595e-6 | 0.939 |
INTRON
Lmpt |
||
3R | 25975834 | 3R_25975834_SNP [dm3] 3R_30150112_SNP [dm6] | G | A | 1.001e-5 | 0.939 |
UPSTREAM
AdoR INTERGENIC |
||
X | 9885770 | X_9885770_SNP [dm3] X_9991737_SNP [dm6] | T | C | 1.136e-5 | 0.939 |
INTRON
CG32694 |
||
X | 9885778 | X_9885778_INS [dm3] X_9991745_INS [dm6] | T | TTAT | 1.136e-5 | 0.939 |
INTRON
CG32694 |
||
3L | 18007548 | 3L_18007548_SNP [dm3] 3L_18014448_SNP [dm6] | T | A | 1.303e-5 | 0.939 |
INTRON
Eip75B |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
|
|
2L | 15410489 | 2L_15410489_DEL [dm3] 2L_15410489_DEL [dm6] | CACCA | C | 1.503e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
3L | 11064482 | 3L_11064482_SNP [dm3] 3L_11071382_SNP [dm6] | C | G | 1.595e-5 | 0.939 |
INTRON
Mocs1 |
||
2L | 15410477 | 2L_15410477_INS [dm3] 2L_15410477_INS [dm6] | A | ATC | 1.628e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da mE1_TFBS_HSA
|
|
2L | 12582924 | 2L_12582924_DEL [dm3] 2L_12582924_DEL [dm6] | AC | T | 1.662e-5 | 0.939 |
DOWNSTREAM
CR44596 EXON CR44595 |
||
2L | 9158939 | 2L_9158939_DEL [dm3] 2L_9158939_DEL [dm6] | TGGATCT | T | 1.791e-5 | 0.939 |
INTRON
CG32982 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA
|
|
2R | 9690762 | 2R_9690762_SNP [dm3] 2R_13803257_SNP [dm6] | T | C | 1.807e-5 | 0.939 |
INTRON
Cpr50Cb |
TF binding site
mE1_TFBS_cad
|
|
2L | 6760755 | 2L_6760755_SNP [dm3] 2L_6760755_SNP [dm6] | T | A | 1.877e-5 | 0.939 |
INTRON
CG11321 |
TF binding site
BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3R | 10936864 | 3R_10936864_SNP [dm3] 3R_15111142_SNP [dm6] | T | A | 1.976e-5 | 0.939 |
INTRON
CG42788 |
||
3R | 23158297 | 3R_23158297_SNP [dm3] 3R_27332575_SNP [dm6] | A | G | 2.008e-5 | 0.939 |
INTERGENIC
|
||
X | 14292784 | X_14292784_SNP [dm3] X_14398751_SNP [dm6] | C | G | 2.159e-5 | 0.939 |
INTRON
dpr8 |
||
2L | 15410512 | 2L_15410512_SNP [dm3] 2L_15410512_SNP [dm6] | A | T | 2.172e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da
|
|
3L | 10920576 | 3L_10920576_SNP [dm3] 3L_10927476_SNP [dm6] | T | C | 2.393e-5 | 0.939 |
INTERGENIC
|
||
X | 9885800 | X_9885800_SNP [dm3] X_9991767_SNP [dm6] | A | T | 2.604e-5 | 0.939 |
INTRON
CG32694 |
||
3L | 20164674 | 3L_20164674_SNP [dm3] 3L_20171574_SNP [dm6] | C | T | 2.627e-5 | 0.939 |
INTRON
CG42674 |
TF binding site
BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
X | 15287918 | X_15287918_SNP [dm3] X_15393885_SNP [dm6] | A | T | 2.644e-5 | 0.939 |
NON_SYNONYMOUS_CODING
Cngl |
TF binding site
mE1_TFBS_chinmo
|
|
3R | 17739896 | 3R_17739896_SNP [dm3] 3R_21914174_SNP [dm6] | A | G | 2.673e-5 | 0.939 |
NON_SYNONYMOUS_CODING
CG17843 DOWNSTREAM CG6690 |
||
2L | 15410506 | 2L_15410506_SNP [dm3] 2L_15410506_SNP [dm6] | T | C | 2.716e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da
|
|
2R | 2999599 | 2R_2999599_SNP [dm3] 2R_7112094_SNP [dm6] | G | A | 2.785e-5 | 0.939 |
INTRON
esn |
TF binding site
mE1_TFBS_inv
|
|
3R | 21383193 | 3R_21383193_SNP [dm3] 3R_25557471_SNP [dm6] | C | A | 2.819e-5 | 0.939 |
INTRON
msi |
||
3R | 15748318 | 3R_15748318_SNP [dm3] 3R_19922596_SNP [dm6] | G | T | 2.888e-5 | 0.939 |
UPSTREAM
CR43282 INTRON CG4462 |
TF binding site
mE1_TFBS_cad
|
|
3R | 15748325 | 3R_15748325_SNP [dm3] 3R_19922603_SNP [dm6] | G | C | 2.888e-5 | 0.939 |
UPSTREAM
CR43282 INTRON CG4462 |
TF binding site
mE1_TFBS_cad
|
|
3R | 21383093 | 3R_21383093_SNP [dm3] 3R_25557371_SNP [dm6] | C | T | 3.071e-5 | 0.939 |
INTRON
msi |
||
2L | 3345713 | 2L_3345713_SNP [dm3] 2L_3345713_SNP [dm6] | A | G | 3.091e-5 | 0.939 |
INTRON
E23 |
TF binding site
mE1_TFBS_cnc
|
|
3R | 4298638 | 3R_4298638_SNP [dm3] 3R_8472916_SNP [dm6] | G | A | 3.194e-5 | 0.939 |
INTRON
CG45263 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_HSA
|
|
2L | 12582921 | 2L_12582921_SNP [dm3] 2L_12582921_SNP [dm6] | A | T | 3.225e-5 | 0.939 |
DOWNSTREAM
CR44596 EXON CR44595 |
||
2R | 18465847 | 2R_18465847_SNP [dm3] 2R_22578342_SNP [dm6] | A | G | 3.255e-5 | 0.939 |
INTRON
dnr1 |
||
3R | 13139524 | 3R_13139524_SNP [dm3] 3R_17313802_SNP [dm6] | G | T | 3.333e-5 | 0.939 |
INTERGENIC
|
||
3R | 18697055 | 3R_18697055_SNP [dm3] 3R_22871333_SNP [dm6] | G | T | 3.416e-5 | 0.939 |
INTERGENIC
|
||
X | 14292801 | X_14292801_SNP [dm3] X_14398768_SNP [dm6] | C | T | 3.504e-5 | 0.939 |
INTRON
dpr8 |
||
3L | 20163596 | 3L_20163596_SNP [dm3] 3L_20170496_SNP [dm6] | G | A | 3.528e-5 | 0.939 |
INTRON
CG42674 |
TF binding site
BDTNP1_TFBS_twi
|
|
3R | 24407229 | 3R_24407229_SNP [dm3] 3R_28581507_SNP [dm6] | G | A | 3.592e-5 | 0.939 |
UTR_3_PRIME
fkh DOWNSTREAM fkh |
regulatory region
REDfly_CRMs
|
|
2L | 15320513 | 2L_15320513_SNP [dm3] 2L_15320513_SNP [dm6] | T | A | 3.714e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
3L | 5126172 | 3L_5126172_SNP [dm3] 3L_5133072_SNP [dm6] | T | C | 3.834e-5 | 0.939 |
UPSTREAM
CG4603 DOWNSTREAM CG15212 INTRON CG15213 |
TF binding site
mE1_TFBS_sens
|
|
X | 15288048 | X_15288048_SNP [dm3] X_15394015_SNP [dm6] | T | C | 3.901e-5 | 0.939 |
SYNONYMOUS_CODING
Cngl |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 13549142 | 2R_13549142_SNP [dm3] 2R_17661637_SNP [dm6] | T | A | 3.941e-5 | 0.939 |
INTRON
CCHa1-R |
||
2R | 9006600 | 2R_9006600_SNP [dm3] 2R_13119095_SNP [dm6] | A | T | 3.971e-5 | 0.939 |
INTRON
CG13325 |
||
3R | 4225046 | 3R_4225046_SNP [dm3] 3R_8399324_SNP [dm6] | C | G | 4.030e-5 | 0.939 |
SYNONYMOUS_CODING
CG45263 |
||
2R | 12198852 | 2R_12198852_SNP [dm3] 2R_16311347_SNP [dm6] | A | G | 4.100e-5 | 0.939 |
INTRON
Nox |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 3512386 | 2R_3512386_SNP [dm3] 2R_7624881_SNP [dm6] | A | G | 4.146e-5 | 0.939 |
INTRON
CG43340 |
||
2L | 6544611 | 2L_6544611_SNP [dm3] 2L_6544611_SNP [dm6] | T | C | 4.170e-5 | 0.939 |
INTRON
eya |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2L | 6544612 | 2L_6544612_SNP [dm3] 2L_6544612_SNP [dm6] | C | G | 4.170e-5 | 0.939 |
INTRON
eya |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2L | 1917308 | 2L_1917308_SNP [dm3] 2L_1917308_SNP [dm6] | C | T | 4.239e-5 | 0.939 |
INTRON
CG7337 |
||
2L | 15410539 | 2L_15410539_DEL [dm3] 2L_15410539_DEL [dm6] | ACATGATATCCACTTTGACA... | A | 4.273e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da
|
|
2L | 9138350 | 2L_9138350_DEL [dm3] 2L_9138350_DEL [dm6] | GG | G | 4.360e-5 | 0.939 |
INTRON
CG32982 |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
|
|
3R | 21384750 | 3R_21384750_SNP [dm3] 3R_25559028_SNP [dm6] | T | C | 4.365e-5 | 0.939 |
INTRON
msi |
||
3R | 14466541 | 3R_14466541_SNP [dm3] 3R_18640819_SNP [dm6] | C | T | 4.448e-5 | 0.939 |
UTR_5_PRIME
CG14301 INTRON qin |
TF binding site
BDTNP1_TFBS_z mE1_TFBS_HSA
|
|
X | 19357808 | X_19357808_SNP [dm3] X_19463775_SNP [dm6] | C | T | 4.474e-5 | 0.939 |
INTRON
kek5 |
||
3L | 3769571 | 3L_3769571_SNP [dm3] 3L_3769571_SNP [dm6] | G | A | 4.582e-5 | 0.939 |
INTRON
CG32264 |
||
2R | 11119735 | 2R_11119735_SNP [dm3] 2R_15232230_SNP [dm6] | T | G | 4.587e-5 | 0.939 |
INTRON
Fs EXON CR44370 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
|
|
3L | 2565943 | 3L_2565943_SNP [dm3] 3L_2565943_SNP [dm6] | C | T | 4.605e-5 | 0.939 |
INTRON
msn |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3R | 10369648 | 3R_10369648_SNP [dm3] 3R_14543926_SNP [dm6] | C | T | 4.621e-5 | 0.939 |
INTRON
Pde6 |
||
2L | 11100948 | 2L_11100948_SNP [dm3] 2L_11100948_SNP [dm6] | C | G | 4.666e-5 | 0.939 |
UPSTREAM
Ge-1 DOWNSTREAM Reps INTERGENIC |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA
|
|
2L | 6760750 | 2L_6760750_SNP [dm3] 2L_6760750_SNP [dm6] | T | G | 4.738e-5 | 0.939 |
INTRON
CG11321 |
TF binding site
BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
2L | 6760751 | 2L_6760751_SNP [dm3] 2L_6760751_SNP [dm6] | T | A | 4.738e-5 | 0.939 |
INTRON
CG11321 |
TF binding site
BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
3L | 2628044 | 3L_2628044_SNP [dm3] 3L_2628044_SNP [dm6] | T | G | 4.738e-5 | 0.939 |
INTRON
Pxn |
TF binding site
BDTNP1_TFBS_sna mE1_TFBS_HSA
|
|
3R | 21384507 | 3R_21384507_SNP [dm3] 3R_25558785_SNP [dm6] | T | G | 4.856e-5 | 0.939 |
INTRON
msi |
||
2R | 13767768 | 2R_13767768_SNP [dm3] 2R_17880263_SNP [dm6] | G | A | 4.946e-5 | 0.939 |
UTR_3_PRIME
CG30110 UPSTREAM CG30325 INTRON Elk |
||
3R | 21385875 | 3R_21385875_SNP [dm3] 3R_25560153_SNP [dm6] | C | T | 4.946e-5 | 0.939 |
INTRON
msi |
||
3L | 2545515 | 3L_2545515_SNP [dm3] 3L_2545515_SNP [dm6] | C | T | 4.955e-5 | 0.939 |
INTRON
Spn |
||
X | 14540916 | X_14540916_SNP [dm3] X_14646883_SNP [dm6] | A | C | 4.969e-5 | 0.939 |
INTRON
NetA |
TF binding site
BDTNP1_TFBS_twi
|
|
3R | 24551478 | 3R_24551478_SNP [dm3] 3R_28725756_SNP [dm6] | T | A | 4.996e-5 | 0.939 |
INTRON
htt |
||
3R | 13840145 | 3R_13840145_INS [dm3] 3R_18014423_INS [dm6] | A | GAAAAG | 5.007e-5 | 0.939 |
UTR_3_PRIME
cpo |
||
2R | 6056168 | 2R_6056168_SNP [dm3] 2R_10168663_SNP [dm6] | T | A | 5.159e-5 | 0.939 |
INTRON
KCNQ |
||
2L | 15410531 | 2L_15410531_SNP [dm3] 2L_15410531_SNP [dm6] | G | A | 5.288e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da
|
|
2L | 1917331 | 2L_1917331_SNP [dm3] 2L_1917331_SNP [dm6] | G | C | 5.301e-5 | 0.939 |
INTRON
CG7337 |
||
3R | 21384765 | 3R_21384765_SNP [dm3] 3R_25559043_SNP [dm6] | A | C | 5.301e-5 | 0.939 |
INTRON
msi |
||
3R | 15748272 | 3R_15748272_SNP [dm3] 3R_19922550_SNP [dm6] | T | A | 5.346e-5 | 0.939 |
UPSTREAM
CR43282 INTRON CG4462 |
||
3R | 21383537 | 3R_21383537_SNP [dm3] 3R_25557815_SNP [dm6] | A | T | 5.362e-5 | 0.939 |
INTRON
msi |
||
3L | 3768024 | 3L_3768024_SNP [dm3] 3L_3768024_SNP [dm6] | G | A | 5.392e-5 | 0.939 |
INTRON
CG32264 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_bab1
|
|
3R | 14108499 | 3R_14108499_SNP [dm3] 3R_18282777_SNP [dm6] | C | T | 5.393e-5 | 0.939 |
UTR_3_PRIME
eIF-1A UPSTREAM CG8064 DOWNSTREAM CG14312 & 1 other |
TF binding site
mE1_TFBS_inv
|
|
2L | 3915988 | 2L_3915988_SNP [dm3] 2L_3915988_SNP [dm6] | C | T | 5.532e-5 | 0.939 |
INTRON
fred |
||
2L | 15410526 | 2L_15410526_SNP [dm3] 2L_15410526_SNP [dm6] | T | A | 5.556e-5 | 0.939 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_da
|
|
3L | 4005200 | 3L_4005200_SNP [dm3] 3L_4005200_SNP [dm6] | C | T | 5.565e-5 | 0.939 |
UTR_3_PRIME
CG14985 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
3R | 21384232 | 3R_21384232_SNP [dm3] 3R_25558510_SNP [dm6] | T | G | 5.627e-5 | 0.939 |
INTRON
msi |
||
2L | 3014626 | 2L_3014626_SNP [dm3] 2L_3014626_SNP [dm6] | A | T | 5.639e-5 | 0.939 |
INTRON
CG17265 |
||
2R | 3519014 | 2R_3519014_SNP [dm3] 2R_7631509_SNP [dm6] | C | T | 5.687e-5 | 0.939 |
INTRON
CG43340 EXON CR45131 |
||
3L | 777025 | 3L_777025_SNP [dm3] 3L_777025_SNP [dm6] | A | G | 5.702e-5 | 0.939 |
INTERGENIC
|
TF binding site
mE1_TFBS_HSA mE1_TFBS_sens
|
|
2L | 6760745 | 2L_6760745_SNP [dm3] 2L_6760745_SNP [dm6] | G | A | 5.838e-5 | 0.939 |
INTRON
CG11321 |
TF binding site
BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
|