DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=2.050e^-8)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
wolba	0.09781

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
wolba	3.9923	0.0457

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

5814 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	26002844	3R_26002844_SNP [dm3] 3R_30177122_SNP [dm6]	G	A	2.094e^-11	1.948e^-5	UPSTREAM CG15530 INTRON CG1983
3R	26003040	3R_26003040_SNP [dm3] 3R_30177318_SNP [dm6]	A	G	2.094e^-11	1.948e^-5	SYNONYMOUS_CODING CG1983 UPSTREAM CG15530
3R	20002096	3R_20002096_SNP [dm3] 3R_24176374_SNP [dm6]	C	G	7.825e^-11	4.853e^-5	INTRON CG13606
3L	15527214	3L_15527214_SNP [dm3] 3L_15534114_SNP [dm6]	C	G	5.017e^-10	2.333e^-4	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
2L	20300761	2L_20300761_SNP [dm3] 2L_20300761_SNP [dm6]	G	A	8.875e^-10	2.471e^-4	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	17762033	3R_17762033_SNP [dm3] 3R_21936311_SNP [dm6]	A	G	9.027e^-10	2.471e^-4	INTERGENIC
3L	7086928	3L_7086928_SNP [dm3] 3L_7093828_SNP [dm6]	C	A	9.296e^-10	2.471e^-4	UTR_3_PRIME Cpr65Ec UPSTREAM form3	TF binding site mE1_TFBS_HSA
3R	17761988	3R_17761988_SNP [dm3] 3R_21936266_SNP [dm6]	A	T	1.276e^-9	2.913e^-4	INTERGENIC
3L	15527485	3L_15527485_SNP [dm3] 3L_15534385_SNP [dm6]	G	A	1.409e^-9	2.913e^-4	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
X	3465738	X_3465738_SNP [dm3] X_3571705_SNP [dm6]	C	T	5.494e^-9	9.376e^-4	NON_SYNONYMOUS_CODING ppk8 UTR_3_PRIME CG2875 UPSTREAM CG32791 DOWNSTREAM CG2875	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3L	17195303	3L_17195303_SNP [dm3] 3L_17202203_SNP [dm6]	C	T	6.132e^-9	9.376e^-4	INTRON Rbp6
3R	14239486	3R_14239486_INS [dm3] 3R_18413764_INS [dm6]	A	AGGATCT	6.998e^-9	9.376e^-4	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	15400434	3R_15400434_SNP [dm3] 3R_19574712_SNP [dm6]	T	C	7.556e^-9	9.376e^-4	INTRON Dys
3R	15400448	3R_15400448_SNP [dm3] 3R_19574726_SNP [dm6]	G	A	7.556e^-9	9.376e^-4	INTRON Dys
3R	14239453	3R_14239453_SNP [dm3] 3R_18413731_SNP [dm6]	T	G	8.258e^-9	9.376e^-4	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	14238195	3R_14238195_SNP [dm3] 3R_18412473_SNP [dm6]	G	C	8.410e^-9	9.376e^-4	UPSTREAM CG10864 INTRON CG31122	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2L	12583640	2L_12583640_INS [dm3] 2L_12583640_INS [dm6]	T	TT	8.567e^-9	9.376e^-4	DOWNSTREAM CR44596 & 1 other INTERGENIC
3R	20095838	3R_20095838_INS [dm3] 3R_24270116_INS [dm6]	C	CT	1.322e^-8	0.001	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_sens
3R	25728462	3R_25728462_SNP [dm3] 3R_29902740_SNP [dm6]	C	G	1.323e^-8	0.001	UTR_3_PRIME CG31038 DOWNSTREAM CG15517
3R	14238710	3R_14238710_SNP [dm3] 3R_18412988_SNP [dm6]	C	T	1.464e^-8	0.001	UPSTREAM CG31122 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
3R	17761394	3R_17761394_SNP [dm3] 3R_21935672_SNP [dm6]	C	T	1.598e^-8	0.001	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	15540482	3L_15540482_SNP [dm3] 3L_15547382_SNP [dm6]	C	T	1.833e^-8	0.001	INTRON CrebA	TF binding site BDTNP1_TFBS_hb
3R	26002153	3R_26002153_SNP [dm3] 3R_30176431_SNP [dm6]	C	T	1.934e^-8	0.001	UTR_3_PRIME CG1983
X	8129876	X_8129876_SNP [dm3] X_8235843_SNP [dm6]	C	T	1.996e^-8	0.001	INTRON sdt	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	15532629	3L_15532629_SNP [dm3] 3L_15539529_SNP [dm6]	G	C	2.053e^-8	0.001	INTRON CrebA
3R	26003031	3R_26003031_SNP [dm3] 3R_30177309_SNP [dm6]	G	A	2.125e^-8	0.001	SYNONYMOUS_CODING CG1983 UPSTREAM CG15530
3R	14495614	3R_14495614_SNP [dm3] 3R_18669892_SNP [dm6]	T	A	2.155e^-8	0.001	UPSTREAM CR45028 DOWNSTREAM CG31229 INTRON CG7702	TF binding site mE1_TFBS_inv mE1_TFBS_Trl
4	279108	4_279108_SNP [dm3] 4_258482_SNP [dm6]	C	G	2.482e^-8	0.002	INTRON RhoGAP102A
3R	20002101	3R_20002101_SNP [dm3] 3R_24176379_SNP [dm6]	A	G	2.635e^-8	0.002	INTRON CG13606
3R	14238633	3R_14238633_SNP [dm3] 3R_18412911_SNP [dm6]	T	C	2.683e^-8	0.002	UPSTREAM CG31122 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2L	13134480	2L_13134480_SNP [dm3] 2L_13134480_SNP [dm6]	C	T	2.842e^-8	0.002	SYNONYMOUS_CODING CG5122
3L	15532671	3L_15532671_SNP [dm3] 3L_15539571_SNP [dm6]	A	G	2.941e^-8	0.002	INTRON CrebA
3R	14798787	3R_14798787_SNP [dm3] 3R_18973065_SNP [dm6]	T	C	3.461e^-8	0.002	SYNONYMOUS_CODING CG42613 UTR_3_PRIME CG43732	TF binding site mE1_TFBS_chinmo
3R	14239045	3R_14239045_SNP [dm3] 3R_18413323_SNP [dm6]	A	T	3.650e^-8	0.002	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
2R	18042878	2R_18042878_SNP [dm3] 2R_22155373_SNP [dm6]	G	A	4.389e^-8	0.002	INTRON a	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	14238923	3R_14238923_SNP [dm3] 3R_18413201_SNP [dm6]	T	A	5.724e^-8	0.003	UPSTREAM CG31122 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Ubx
3R	14239216	3R_14239216_SNP [dm3] 3R_18413494_SNP [dm6]	C	A	6.640e^-8	0.003	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	26490804	3R_26490804_SNP [dm3] 3R_30665082_SNP [dm6]	A	T	7.460e^-8	0.004	EXON CR45191
3R	16671543	3R_16671543_SNP [dm3] 3R_20845821_SNP [dm6]	G	A	8.229e^-8	0.004	DOWNSTREAM CG15695 INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	19248968	X_19248968_SNP [dm3] X_19354935_SNP [dm6]	G	A	8.533e^-8	0.004	INTRON kek5	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	14239061	3R_14239061_SNP [dm3] 3R_18413339_SNP [dm6]	T	A	8.604e^-8	0.004	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	14239063	3R_14239063_SNP [dm3] 3R_18413341_SNP [dm6]	A	T	8.604e^-8	0.004	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	9868366	3R_9868366_SNP [dm3] 3R_14042644_SNP [dm6]	A	T	8.909e^-8	0.004	INTERGENIC
3R	14239046	3R_14239046_SNP [dm3] 3R_18413324_SNP [dm6]	T	G	1.012e^-7	0.004	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
X	8129901	X_8129901_SNP [dm3] X_8235868_SNP [dm6]	C	T	1.058e^-7	0.004	INTRON sdt	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	8129911	X_8129911_SNP [dm3] X_8235878_SNP [dm6]	C	G	1.058e^-7	0.004	SPLICE_SITE_REGION sdt INTRON sdt	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	26002253	3R_26002253_SNP [dm3] 3R_30176531_SNP [dm6]	C	A	1.169e^-7	0.004	NON_SYNONYMOUS_CODING CG1983
2R	7468950	2R_7468950_SNP [dm3] 2R_11581445_SNP [dm6]	G	C	1.184e^-7	0.004	INTRON tou	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2R	7468972	2R_7468972_SNP [dm3] 2R_11581467_SNP [dm6]	C	A	1.184e^-7	0.004	INTRON tou	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2L	9485940	2L_9485940_SNP [dm3] 2L_9485940_SNP [dm6]	G	C	1.185e^-7	0.004	INTERGENIC
3R	17772582	3R_17772582_SNP [dm3] 3R_21946860_SNP [dm6]	T	C	1.284e^-7	0.005	INTERGENIC
3R	14239084	3R_14239084_SNP [dm3] 3R_18413362_SNP [dm6]	C	T	1.347e^-7	0.005	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	6738569	3R_6738569_SNP [dm3] 3R_10912847_SNP [dm6]	T	A	1.359e^-7	0.005	INTERGENIC
3L	15535006	3L_15535006_SNP [dm3] 3L_15541906_SNP [dm6]	A	G	1.614e^-7	0.005	INTRON CrebA
3R	13811250	3R_13811250_SNP [dm3] 3R_17985528_SNP [dm6]	T	A	1.616e^-7	0.005	INTRON cpo
3R	21504044	3R_21504044_SNP [dm3] 3R_25678322_SNP [dm6]	C	T	1.759e^-7	0.006	SYNONYMOUS_CODING CG4730 UPSTREAM CG5039 DOWNSTREAM CG4743	TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_sens
3R	14239002	3R_14239002_MNP [dm3] 3R_18413280_MNP [dm6]	ATC	TAA	1.830e^-7	0.006	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	14239006	3R_14239006_SNP [dm3] 3R_18413284_SNP [dm6]	A	G	1.830e^-7	0.006	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	14239015	3R_14239015_SNP [dm3] 3R_18413293_SNP [dm6]	G	A	1.830e^-7	0.006	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3L	3943729	3L_3943729_SNP [dm3] 3L_3943729_SNP [dm6]	T	C	1.868e^-7	0.006	SYNONYMOUS_CODING CG14982	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo
2R	14642336	2R_14642336_SNP [dm3] 2R_18754831_SNP [dm6]	G	A	2.094e^-7	0.006	UPSTREAM Cyp12b2 DOWNSTREAM Hs3st-A INTERGENIC
2L	8185707	2L_8185707_SNP [dm3] 2L_8185707_SNP [dm6]	C	T	2.104e^-7	0.006	INTRON Piezo
3R	21502780	3R_21502780_SNP [dm3] 3R_25677058_SNP [dm6]	C	T	2.215e^-7	0.006	UTR_3_PRIME Lgr3 UPSTREAM CR45225 DOWNSTREAM CG4730
3R	17373071	3R_17373071_SNP [dm3] 3R_21547349_SNP [dm6]	T	C	2.233e^-7	0.006	INTERGENIC
3R	6745205	3R_6745205_SNP [dm3] 3R_10919483_SNP [dm6]	T	C	2.281e^-7	0.006	INTERGENIC
3R	14238898	3R_14238898_SNP [dm3] 3R_18413176_SNP [dm6]	T	C	2.294e^-7	0.006	UPSTREAM CG31122 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Ubx
2R	11203393	2R_11203393_SNP [dm3] 2R_15315888_SNP [dm6]	T	A	2.407e^-7	0.007	SYNONYMOUS_CODING mus210
3R	14238960	3R_14238960_SNP [dm3] 3R_18413238_SNP [dm6]	C	A	2.533e^-7	0.007	UPSTREAM CG31122 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3L	16134382	3L_16134382_DEL [dm3] 3L_16141282_DEL [dm6]	CGA	C	2.568e^-7	0.007	INTRON CG5151 & 1 other	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	15526642	3L_15526642_SNP [dm3] 3L_15533542_SNP [dm6]	G	T	2.617e^-7	0.007	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_inv mE1_TFBS_Trl
3R	11698474	3R_11698474_SNP [dm3] 3R_15872752_SNP [dm6]	T	C	2.713e^-7	0.007	INTRON CG31183
2R	14642297	2R_14642297_SNP [dm3] 2R_18754792_SNP [dm6]	A	G	2.719e^-7	0.007	UPSTREAM Cyp12b2 DOWNSTREAM Hs3st-A INTERGENIC
3R	13415655	3R_13415655_SNP [dm3] 3R_17589933_SNP [dm6]	A	C	2.826e^-7	0.007	INTERGENIC
3R	9981136	3R_9981136_SNP [dm3] 3R_14155414_SNP [dm6]	C	A	2.840e^-7	0.007	SYNONYMOUS_CODING CG31533 UPSTREAM CR44215	TF binding site mE1_TFBS_sens
3L	9340969	3L_9340969_SNP [dm3] 3L_9347869_SNP [dm6]	C	T	2.855e^-7	0.007	SYNONYMOUS_CODING PGRP-LC UTR_3_PRIME PGRP-LC DOWNSTREAM PGRP-LC
3R	20095523	3R_20095523_SNP [dm3] 3R_24269801_SNP [dm6]	C	A	2.921e^-7	0.007	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3L	5245790	3L_5245790_SNP [dm3] 3L_5252690_SNP [dm6]	C	T	2.968e^-7	0.007	INTRON shep
3R	20095751	3R_20095751_SNP [dm3] 3R_24270029_SNP [dm6]	C	T	2.991e^-7	0.007	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens
3R	26491206	3R_26491206_SNP [dm3] 3R_30665484_SNP [dm6]	T	C	3.045e^-7	0.007	INTRON CR45191
X	8129900	X_8129900_SNP [dm3] X_8235867_SNP [dm6]	C	T	3.055e^-7	0.007	INTRON sdt	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	21488823	3R_21488823_SNP [dm3] 3R_25663101_SNP [dm6]	A	T	3.063e^-7	0.007	UPSTREAM CR45208 INTRON RASSF8	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
X	17219792	X_17219792_SNP [dm3] X_17325759_SNP [dm6]	T	A	3.091e^-7	0.007	INTERGENIC	TF binding site BDTNP1_TFBS_prd
3R	22748845	3R_22748845_SNP [dm3] 3R_26923123_SNP [dm6]	C	T	3.106e^-7	0.007	INTRON sda
3L	11343912	3L_11343912_SNP [dm3] 3L_11350812_SNP [dm6]	A	G	3.193e^-7	0.007	INTERGENIC
2L	20462297	2L_20462297_SNP [dm3] 2L_20462297_SNP [dm6]	G	A	3.227e^-7	0.007	SYNONYMOUS_CODING CG2493 DOWNSTREAM Cdc23	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3R	14239200	3R_14239200_SNP [dm3] 3R_18413478_SNP [dm6]	A	G	3.278e^-7	0.007	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	11698488	3R_11698488_SNP [dm3] 3R_15872766_SNP [dm6]	G	A	3.346e^-7	0.007	INTRON CG31183
3L	11343875	3L_11343875_SNP [dm3] 3L_11350775_SNP [dm6]	T	C	3.511e^-7	0.007	INTERGENIC
3R	14239065	3R_14239065_SNP [dm3] 3R_18413343_SNP [dm6]	A	C	3.544e^-7	0.007	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3L	14609861	3L_14609861_SNP [dm3] 3L_14616761_SNP [dm6]	T	C	3.697e^-7	0.008	INTRON shd
X	7897467	X_7897467_SNP [dm3] X_8003434_SNP [dm6]	A	T	3.706e^-7	0.008	INTRON Tbh
3R	17779242	3R_17779242_SNP [dm3] 3R_21953520_SNP [dm6]	A	G	3.715e^-7	0.008	INTRON Eip93F
2R	11283543	2R_11283543_SNP [dm3] 2R_15396038_SNP [dm6]	T	C	3.856e^-7	0.008	INTERGENIC
2R	8490251	2R_8490251_SNP [dm3] 2R_12602746_SNP [dm6]	A	G	4.012e^-7	0.008	INTRON Amph
3R	20095472	3R_20095472_SNP [dm3] 3R_24269750_SNP [dm6]	G	A	4.205e^-7	0.008	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	8272531	2L_8272531_SNP [dm3] 2L_8272531_SNP [dm6]	A	G	4.261e^-7	0.008	UTR_5_PRIME Btk29A INTRON Btk29A	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	11343874	3L_11343874_SNP [dm3] 3L_11350774_SNP [dm6]	C	T	4.620e^-7	0.009	INTERGENIC
3R	20095492	3R_20095492_SNP [dm3] 3R_24269770_SNP [dm6]	G	A	4.871e^-7	0.009	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	20095505	3R_20095505_SNP [dm3] 3R_24269783_SNP [dm6]	G	T	4.871e^-7	0.009	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	14239542	3R_14239542_INS [dm3] 3R_18413820_INS [dm6]	C	CCATCAGAAAAGTAAACTAG...	4.876e^-7	0.009	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	12471198	3R_12471198_SNP [dm3] 3R_16645476_SNP [dm6]	T	C	4.970e^-7	0.009	NON_SYNONYMOUS_CODING CG10324 DOWNSTREAM CG10326
2L	12583632	2L_12583632_SNP [dm3] 2L_12583632_SNP [dm6]	G	A	5.067e^-7	0.009	DOWNSTREAM CR44596 & 1 other INTERGENIC
3R	14238964	3R_14238964_SNP [dm3] 3R_18413242_SNP [dm6]	T	A	5.080e^-7	0.009	UPSTREAM CG31122 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	26006248	3R_26006248_SNP [dm3] 3R_30180526_SNP [dm6]	C	T	5.182e^-7	0.009	SYNONYMOUS_CODING Bet5 DOWNSTREAM CG15530	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Ubx
2L	10494564	2L_10494564_SNP [dm3] 2L_10494564_SNP [dm6]	A	G	5.207e^-7	0.009	SYNONYMOUS_CODING Myo31DF
3R	25727364	3R_25727364_SNP [dm3] 3R_29901642_SNP [dm6]	A	T	5.230e^-7	0.009	INTRON CG31038
3R	21513272	3R_21513272_DEL [dm3] 3R_25687550_DEL [dm6]	TGATTGGAAT	T	5.248e^-7	0.009	UPSTREAM CLS INTERGENIC
3R	14182408	3R_14182408_SNP [dm3] 3R_18356686_SNP [dm6]	G	T	5.393e^-7	0.009	INTRON CG15803
3R	15653686	3R_15653686_SNP [dm3] 3R_19827964_SNP [dm6]	C	T	5.548e^-7	0.009	SYNONYMOUS_CODING bnl	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
2R	18050765	2R_18050765_SNP [dm3] 2R_22163260_SNP [dm6]	C	T	5.730e^-7	0.01	NON_SYNONYMOUS_CODING a DOWNSTREAM CG34206	TF binding site mE1_TFBS_cad
X	5166115	X_5166115_SNP [dm3] X_5272082_SNP [dm6]	C	T	5.745e^-7	0.01	INTERGENIC
3R	17373049	3R_17373049_SNP [dm3] 3R_21547327_SNP [dm6]	C	T	5.984e^-7	0.01	INTERGENIC
3R	20095487	3R_20095487_SNP [dm3] 3R_24269765_SNP [dm6]	T	G	6.068e^-7	0.01	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	19204185	3R_19204185_SNP [dm3] 3R_23378463_SNP [dm6]	A	T	6.151e^-7	0.01	INTRON CG4393	TF binding site mE1_TFBS_inv
X	15995430	X_15995430_INS [dm3] X_16101397_INS [dm6]	A	AGAAAGA	6.156e^-7	0.01	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	25930732	3R_25930732_SNP [dm3] 3R_30105010_SNP [dm6]	C	T	6.192e^-7	0.01	INTRON sima
3R	22662469	3R_22662469_SNP [dm3] 3R_26836747_SNP [dm6]	A	G	6.261e^-7	0.01	INTRON Tl
3R	20095498	3R_20095498_SNP [dm3] 3R_24269776_SNP [dm6]	G	A	6.311e^-7	0.01	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	1988157	2L_1988157_SNP [dm3] 2L_1988157_SNP [dm6]	A	C	6.439e^-7	0.01	UPSTREAM Npc2a & 1 other INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	15400523	3R_15400523_SNP [dm3] 3R_19574801_SNP [dm6]	G	A	6.659e^-7	0.01	INTRON Dys
3R	13188119	3R_13188119_SNP [dm3] 3R_17362397_SNP [dm6]	A	G	6.935e^-7	0.011	INTRON beat-IIa
X	16001314	X_16001314_SNP [dm3] X_16107281_SNP [dm6]	G	C	7.611e^-7	0.012	INTERGENIC
3R	14238765	3R_14238765_SNP [dm3] 3R_18413043_SNP [dm6]	G	T	7.662e^-7	0.012	UPSTREAM CG31122 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2R	19520034	2R_19520034_SNP [dm3] 2R_23632511_SNP [dm6]	G	A	8.456e^-7	0.013	UPSTREAM retn INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl
3R	17372126	3R_17372126_SNP [dm3] 3R_21546404_SNP [dm6]	C	G	8.462e^-7	0.013	INTERGENIC
3L	20066118	3L_20066118_SNP [dm3] 3L_20073018_SNP [dm6]	A	C	9.252e^-7	0.014	INTRON sNPF-R
X	8129885	X_8129885_SNP [dm3] X_8235852_SNP [dm6]	A	C	9.484e^-7	0.014	INTRON sdt	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	13911212	3R_13911212_SNP [dm3] 3R_18085490_SNP [dm6]	G	A	9.577e^-7	0.014	INTERGENIC
2R	17374980	2R_17374980_SNP [dm3] 2R_21487475_SNP [dm6]	G	A	9.965e^-7	0.014	UTR_3_PRIME Fkbp14 DOWNSTREAM Sara
2R	7907405	2R_7907405_SNP [dm3] 2R_12019900_SNP [dm6]	C	T	1.021e^-6	0.015	UPSTREAM otk INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	15407410	3R_15407410_MNP [dm3] 3R_19581688_MNP [dm6]	TTT	GGG	1.053e^-6	0.015	INTRON Dys
3R	15407414	3R_15407414_DEL [dm3] 3R_19581692_DEL [dm6]	TT	T	1.053e^-6	0.015	INTRON Dys
X	13990156	X_13990156_SNP [dm3] X_14096123_SNP [dm6]	T	C	1.069e^-6	0.015	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	13044974	X_13044974_SNP [dm3] X_13150941_SNP [dm6]	A	C	1.129e^-6	0.015	INTRON CG32645	TF binding site mE1_TFBS_cad
3R	23437456	3R_23437456_SNP [dm3] 3R_27611734_SNP [dm6]	G	A	1.129e^-6	0.015	INTRON Tusp	TF binding site mE1_TFBS_HSA
3R	14239269	3R_14239269_SNP [dm3] 3R_18413547_SNP [dm6]	T	G	1.130e^-6	0.015	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	10256168	3R_10256168_SNP [dm3] 3R_14430446_SNP [dm6]	T	A	1.135e^-6	0.015	INTRON cv-c
3R	26150665	3R_26150665_SNP [dm3] 3R_30324943_SNP [dm6]	A	T	1.139e^-6	0.015	INTRON hdc
2R	17027608	2R_17027608_SNP [dm3] 2R_21140103_SNP [dm6]	G	T	1.166e^-6	0.016	UPSTREAM Magi INTRON Magi	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	13486546	3L_13486546_SNP [dm3] 3L_13493446_SNP [dm6]	T	G	1.180e^-6	0.016	INTRON Tgi
3L	623524	3L_623524_SNP [dm3] 3L_623524_SNP [dm6]	C	T	1.188e^-6	0.016	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	3943789	3L_3943789_SNP [dm3] 3L_3943789_SNP [dm6]	G	A	1.196e^-6	0.016	SYNONYMOUS_CODING CG14982	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo
3R	14239465	3R_14239465_SNP [dm3] 3R_18413743_SNP [dm6]	A	T	1.213e^-6	0.016	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	16780657	3L_16780657_SNP [dm3] 3L_16787557_SNP [dm6]	A	T	1.235e^-6	0.016	UPSTREAM Int6 DOWNSTREAM CG9674 INTERGENIC
2R	18042772	2R_18042772_SNP [dm3] 2R_22155267_SNP [dm6]	T	A	1.246e^-6	0.016	INTRON a	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	17724207	3R_17724207_SNP [dm3] 3R_21898485_SNP [dm6]	C	T	1.259e^-6	0.016	INTRON CG6678
3R	26017434	3R_26017434_SNP [dm3] 3R_30191712_SNP [dm6]	T	A	1.260e^-6	0.016	UPSTREAM CG9747 INTERGENIC
2R	17027493	2R_17027493_SNP [dm3] 2R_21139988_SNP [dm6]	G	C	1.312e^-6	0.016	UPSTREAM Magi INTRON Magi
3R	16850412	3R_16850412_SNP [dm3] 3R_21024690_SNP [dm6]	C	G	1.318e^-6	0.016	UTR_3_PRIME Dhc93AB UPSTREAM CG17278
3L	15531504	3L_15531504_SNP [dm3] 3L_15538404_SNP [dm6]	T	G	1.472e^-6	0.018	INTRON CrebA	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	19203921	3R_19203921_SNP [dm3] 3R_23378199_SNP [dm6]	A	G	1.510e^-6	0.019	INTRON CG4393	TF binding site mE1_TFBS_inv
3R	16075471	3R_16075471_SNP [dm3] 3R_20249749_SNP [dm6]	G	T	1.517e^-6	0.019	INTERGENIC
2R	17135897	2R_17135897_SNP [dm3] 2R_21248392_SNP [dm6]	A	T	1.566e^-6	0.019	INTRON ASPP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18397321	2L_18397321_SNP [dm3] 2L_18397321_SNP [dm6]	G	A	1.573e^-6	0.019	INTERGENIC
2R	8713243	2R_8713243_SNP [dm3] 2R_12825738_SNP [dm6]	A	G	1.589e^-6	0.019	INTERGENIC
3R	14239280	3R_14239280_SNP [dm3] 3R_18413558_SNP [dm6]	T	A	1.592e^-6	0.019	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	13559548	2R_13559548_SNP [dm3] 2R_17672043_SNP [dm6]	G	A	1.595e^-6	0.019	SYNONYMOUS_CODING P32 DOWNSTREAM CR44404 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	18043260	2R_18043260_SNP [dm3] 2R_22155755_SNP [dm6]	T	A	1.612e^-6	0.019	INTRON a	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	25103708	3R_25103708_SNP [dm3] 3R_29277986_SNP [dm6]	C	G	1.618e^-6	0.019	UPSTREAM CR45568 INTERGENIC	regulatory region REDfly_CRMs
3R	23436603	3R_23436603_SNP [dm3] 3R_27610881_SNP [dm6]	A	T	1.660e^-6	0.019	INTRON Tusp
3L	10190253	3L_10190253_SNP [dm3] 3L_10197153_SNP [dm6]	C	T	1.722e^-6	0.02	INTRON ect	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	2302693	X_2302693_SNP [dm3] X_2408660_SNP [dm6]	T	C	1.732e^-6	0.02	DOWNSTREAM CG12496 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
3L	15543723	3L_15543723_SNP [dm3] 3L_15550623_SNP [dm6]	G	A	1.750e^-6	0.02	INTRON CrebA	TF binding site mE1_TFBS_cad
3L	15545597	3L_15545597_SNP [dm3] 3L_15552497_SNP [dm6]	G	A	1.750e^-6	0.02	UTR_3_PRIME CrebA DOWNSTREAM CrebA
2L	4651752	2L_4651752_SNP [dm3] 2L_4651752_SNP [dm6]	G	T	1.757e^-6	0.02	INTRON CG3355
3R	11523910	3R_11523910_SNP [dm3] 3R_15698188_SNP [dm6]	A	C	1.802e^-6	0.02	UPSTREAM CR45636 DOWNSTREAM CR45635 INTERGENIC
2R	4150266	2R_4150266_SNP [dm3] 2R_8262761_SNP [dm6]	T	A	1.828e^-6	0.02	UTR_3_PRIME CG12126 DOWNSTREAM CG30376
3R	11698442	3R_11698442_SNP [dm3] 3R_15872720_SNP [dm6]	A	G	1.840e^-6	0.02	INTRON CG31183
3R	11698481	3R_11698481_SNP [dm3] 3R_15872759_SNP [dm6]	T	C	1.840e^-6	0.02	INTRON CG31183
2R	14642225	2R_14642225_SNP [dm3] 2R_18754720_SNP [dm6]	C	T	1.846e^-6	0.02	UPSTREAM Cyp12b2 DOWNSTREAM Hs3st-A INTERGENIC
X	15995535	X_15995535_SNP [dm3] X_16101502_SNP [dm6]	C	G	1.875e^-6	0.02	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	20095153	3R_20095153_SNP [dm3] 3R_24269431_SNP [dm6]	C	T	1.941e^-6	0.021	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
X	19248984	X_19248984_SNP [dm3] X_19354951_SNP [dm6]	C	A	1.943e^-6	0.021	INTRON kek5	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	14312185	3L_14312185_SNP [dm3] 3L_14319085_SNP [dm6]	G	A	1.958e^-6	0.021	INTRON fz
3R	13190039	3R_13190039_SNP [dm3] 3R_17364317_SNP [dm6]	T	C	1.958e^-6	0.021	INTRON beat-IIa
X	16159518	X_16159518_SNP [dm3] X_16265485_SNP [dm6]	T	G	2.000e^-6	0.021	SYNONYMOUS_CODING CG12507
X	16159521	X_16159521_SNP [dm3] X_16265488_SNP [dm6]	T	A	2.000e^-6	0.021	SYNONYMOUS_CODING CG12507
X	16159652	X_16159652_DEL [dm3] X_16265619_DEL [dm6]	GCGCCATGGG	G	2.000e^-6	0.021	CODON_DELETION CG12507
X	16609203	X_16609203_SNP [dm3] X_16715170_SNP [dm6]	C	T	2.024e^-6	0.021	SYNONYMOUS_CODING CG34325 DOWNSTREAM CG13008
2L	20338711	2L_20338711_DEL [dm3] 2L_20338711_DEL [dm6]	CTAGATACGCTCC...	C	2.039e^-6	0.021	INTRON spir	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	19248983	X_19248983_SNP [dm3] X_19354950_SNP [dm6]	G	A	2.080e^-6	0.021	INTRON kek5	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	17372987	3R_17372987_SNP [dm3] 3R_21547265_SNP [dm6]	G	A	2.080e^-6	0.021	INTERGENIC
3R	25097623	3R_25097623_SNP [dm3] 3R_29271901_SNP [dm6]	A	G	2.123e^-6	0.021	INTERGENIC	regulatory region REDfly_CRMs
3R	26878026	3R_26878026_SNP [dm3] 3R_31052304_SNP [dm6]	G	C	2.124e^-6	0.021	SYNONYMOUS_CODING Aph-4 DOWNSTREAM l_3_03670
3R	26878461	3R_26878461_SNP [dm3] 3R_31052739_SNP [dm6]	A	T	2.124e^-6	0.021	UTR_3_PRIME l_3_03670 DOWNSTREAM Aph-4	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	11708979	3R_11708979_SNP [dm3] 3R_15883257_SNP [dm6]	A	T	2.132e^-6	0.021	INTERGENIC
3R	26865632	3R_26865632_SNP [dm3] 3R_31039910_SNP [dm6]	C	T	2.157e^-6	0.021	UTR_5_PRIME CanA1 INTRON CanA1	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	26345086	3R_26345086_SNP [dm3] 3R_30519364_SNP [dm6]	G	A	2.167e^-6	0.021	DOWNSTREAM jdp INTRON jdp
3L	10046966	3L_10046966_SNP [dm3] 3L_10053866_SNP [dm6]	T	A	2.184e^-6	0.021	INTRON dpr6
3R	14234841	3R_14234841_SNP [dm3] 3R_18409119_SNP [dm6]	A	G	2.190e^-6	0.021	NON_SYNONYMOUS_CODING CG31122 DOWNSTREAM CG10864
3R	11698455	3R_11698455_SNP [dm3] 3R_15872733_SNP [dm6]	G	A	2.234e^-6	0.022	INTRON CG31183
3R	26003908	3R_26003908_SNP [dm3] 3R_30178186_SNP [dm6]	T	A	2.378e^-6	0.023	SYNONYMOUS_CODING CG15530 UPSTREAM CG1983	TF binding site mE1_TFBS_chinmo
3R	26003962	3R_26003962_SNP [dm3] 3R_30178240_SNP [dm6]	C	A	2.378e^-6	0.023	UPSTREAM CG1983 INTRON CG15530	TF binding site mE1_TFBS_chinmo
3L	6577913	3L_6577913_SNP [dm3] 3L_6584813_SNP [dm6]	A	C	2.435e^-6	0.023	INTRON CG18769 & 1 other	TF binding site mE1_TFBS_inv
2R	17032732	2R_17032732_SNP [dm3] 2R_21145227_SNP [dm6]	A	G	2.436e^-6	0.023	NON_SYNONYMOUS_CODING Xbp1 UTR_3_PRIME Xbp1 UPSTREAM Hmg-2
4	398582	4_398582_SNP [dm3] 4_377956_SNP [dm6]	T	G	2.437e^-6	0.023	NON_SYNONYMOUS_CODING Lin29	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	23910116	3R_23910116_SNP [dm3] 3R_28084394_SNP [dm6]	G	T	2.441e^-6	0.023	INTRON CG34362
3L	10932657	3L_10932657_SNP [dm3] 3L_10939557_SNP [dm6]	C	A	2.467e^-6	0.023	INTERGENIC
2R	17681279	2R_17681279_SNP [dm3] 2R_21793774_SNP [dm6]	G	A	2.598e^-6	0.024	INTERGENIC
2R	17681294	2R_17681294_SNP [dm3] 2R_21793789_SNP [dm6]	G	C	2.598e^-6	0.024	INTERGENIC
3L	7618357	3L_7618357_SNP [dm3] 3L_7625257_SNP [dm6]	C	G	2.598e^-6	0.024	INTRON CG33275	TF binding site mE1_TFBS_chinmo
3R	11523973	3R_11523973_SNP [dm3] 3R_15698251_SNP [dm6]	T	C	2.652e^-6	0.024	UPSTREAM CR45636 DOWNSTREAM CR45635 INTERGENIC
X	778659	X_778659_SNP [dm3] X_884626_SNP [dm6]	A	G	2.655e^-6	0.024	UPSTREAM CG43867 INTRON CG43867	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	14239414	3R_14239414_SNP [dm3] 3R_18413692_SNP [dm6]	C	T	2.657e^-6	0.024	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	26001963	3R_26001963_SNP [dm3] 3R_30176241_SNP [dm6]	A	C	2.715e^-6	0.025	UTR_3_PRIME CG1983
2L	4651746	2L_4651746_SNP [dm3] 2L_4651746_SNP [dm6]	A	T	2.744e^-6	0.025	INTRON CG3355
3R	18684310	3R_18684310_SNP [dm3] 3R_22858588_SNP [dm6]	C	G	2.767e^-6	0.025	INTERGENIC
X	5865777	X_5865777_SNP [dm3] X_5971744_SNP [dm6]	T	C	2.873e^-6	0.026	INTRON Grip
3R	9759937	3R_9759937_MNP [dm3] 3R_13934215_MNP [dm6]	GTC	AAT	2.903e^-6	0.026	INTERGENIC
X	16159680	X_16159680_SNP [dm3] X_16265647_SNP [dm6]	C	T	2.903e^-6	0.026	SYNONYMOUS_CODING CG12507
2L	9486072	2L_9486072_DEL [dm3] 2L_9486072_DEL [dm6]	AA	A	2.931e^-6	0.026	INTERGENIC
3R	22132039	3R_22132039_SNP [dm3] 3R_26306317_SNP [dm6]	A	T	2.945e^-6	0.026	INTERGENIC
2R	17135634	2R_17135634_SNP [dm3] 2R_21248129_SNP [dm6]	T	C	2.975e^-6	0.026	INTRON ASPP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17075061	2R_17075061_SNP [dm3] 2R_21187556_SNP [dm6]	G	A	2.999e^-6	0.026	SYNONYMOUS_CODING tud	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	26877978	3R_26877978_SNP [dm3] 3R_31052256_SNP [dm6]	C	T	3.003e^-6	0.026	SYNONYMOUS_CODING Aph-4 DOWNSTREAM l_3_03670
3R	24016814	3R_24016814_SNP [dm3] 3R_28191092_SNP [dm6]	G	C	3.051e^-6	0.026	INTRON CG34354
3R	24016925	3R_24016925_SNP [dm3] 3R_28191203_SNP [dm6]	G	A	3.051e^-6	0.026	INTRON CG34354
3R	10914382	3R_10914382_SNP [dm3] 3R_15088660_SNP [dm6]	T	A	3.077e^-6	0.026	INTRON CG6966
3R	17761413	3R_17761413_SNP [dm3] 3R_21935691_SNP [dm6]	G	A	3.100e^-6	0.026	INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15215557	3R_15215557_SNP [dm3] 3R_19389835_SNP [dm6]	C	T	3.118e^-6	0.026	UTR_3_PRIME CG3734 UPSTREAM CG18493 INTRON Ino80
3R	26181485	3R_26181485_SNP [dm3] 3R_30355763_SNP [dm6]	C	T	3.139e^-6	0.026	INTRON hdc
3R	12471221	3R_12471221_SNP [dm3] 3R_16645499_SNP [dm6]	T	G	3.139e^-6	0.026	NON_SYNONYMOUS_CODING CG10324 DOWNSTREAM CG10326
3R	12471232	3R_12471232_SNP [dm3] 3R_16645510_SNP [dm6]	T	C	3.139e^-6	0.026	SYNONYMOUS_CODING CG10324 DOWNSTREAM CG10326
2R	19216001	2R_19216001_DEL [dm3] 2R_23328478_DEL [dm6]	TACACATAGAGTTT...	T	3.146e^-6	0.026	UPSTREAM CG30417 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	14798701	3R_14798701_SNP [dm3] 3R_18972979_SNP [dm6]	C	T	3.224e^-6	0.027	SPLICE_SITE_REGION CG42613 & 1 other INTRON CG42613 & 1 other	TF binding site mE1_TFBS_chinmo
3L	9560986	3L_9560986_SNP [dm3] 3L_9567886_SNP [dm6]	A	G	3.310e^-6	0.027	INTRON CG42673
2L	4651749	2L_4651749_SNP [dm3] 2L_4651749_SNP [dm6]	A	T	3.312e^-6	0.027	INTRON CG3355
2R	17076739	2R_17076739_SNP [dm3] 2R_21189234_SNP [dm6]	A	G	3.324e^-6	0.027	SYNONYMOUS_CODING tud	TF binding site mE1_TFBS_sens
2L	12583701	2L_12583701_SNP [dm3] 2L_12583701_SNP [dm6]	A	G	3.341e^-6	0.027	DOWNSTREAM CR44596 & 1 other INTERGENIC
3R	14798689	3R_14798689_SNP [dm3] 3R_18972967_SNP [dm6]	T	C	3.413e^-6	0.028	INTRON CG42613 & 1 other	TF binding site mE1_TFBS_chinmo
3R	19204773	3R_19204773_SNP [dm3] 3R_23379051_SNP [dm6]	G	A	3.505e^-6	0.028	SYNONYMOUS_CODING CG4393	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	9868260	3R_9868260_SNP [dm3] 3R_14042538_SNP [dm6]	A	T	3.513e^-6	0.028	INTERGENIC
2R	20392211	2R_20392211_SNP [dm3] 2R_24504688_SNP [dm6]	G	A	3.555e^-6	0.028	INTERGENIC
3R	16368870	3R_16368870_SNP [dm3] 3R_20543148_SNP [dm6]	T	G	3.558e^-6	0.028	INTRON Stat92E	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
X	7888640	X_7888640_SNP [dm3] X_7994607_SNP [dm6]	C	T	3.593e^-6	0.028	INTERGENIC
X	8185810	X_8185810_SNP [dm3] X_8291777_SNP [dm6]	C	T	3.593e^-6	0.028	INTRON nAChRalpha3
3L	10932633	3L_10932633_SNP [dm3] 3L_10939533_SNP [dm6]	C	A	3.602e^-6	0.028	INTERGENIC
3R	11524045	3R_11524045_SNP [dm3] 3R_15698323_SNP [dm6]	A	G	3.615e^-6	0.028	DOWNSTREAM CR45635 EXON CR45636
X	5511876	X_5511876_SNP [dm3] X_5617843_SNP [dm6]	T	G	3.633e^-6	0.028	INTRON RhoGAP5A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
2L	8186631	2L_8186631_SNP [dm3] 2L_8186631_SNP [dm6]	C	A	3.650e^-6	0.028	SYNONYMOUS_CODING Piezo
2L	19849565	2L_19849565_SNP [dm3] 2L_19849565_SNP [dm6]	G	T	3.658e^-6	0.028	UPSTREAM sick INTRON sick	TF binding site mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	14243706	3R_14243706_SNP [dm3] 3R_18417984_SNP [dm6]	C	T	3.694e^-6	0.028	DOWNSTREAM fru INTRON fru	TF binding site BDTNP1_TFBS_dl
3R	16671005	3R_16671005_SNP [dm3] 3R_20845283_SNP [dm6]	A	T	3.723e^-6	0.029	DOWNSTREAM CG15695 INTERGENIC
3R	21107727	3R_21107727_SNP [dm3] 3R_25282005_SNP [dm6]	A	C	3.754e^-6	0.029	SYNONYMOUS_CODING CG11892	TF binding site mE1_TFBS_HSA
3L	7419473	3L_7419473_SNP [dm3] 3L_7426373_SNP [dm6]	G	A	3.756e^-6	0.029	INTRON CG42458
2R	7469444	2R_7469444_SNP [dm3] 2R_11581939_SNP [dm6]	G	A	3.786e^-6	0.029	SYNONYMOUS_CODING tou START_GAINED tou UTR_5_PRIME tou INTRON tou	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk
3L	18939755	3L_18939755_SNP [dm3] 3L_18946655_SNP [dm6]	C	G	3.802e^-6	0.029	UPSTREAM CG32204 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	14239319	3R_14239319_SNP [dm3] 3R_18413597_SNP [dm6]	T	A	3.820e^-6	0.029	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	11343978	3L_11343978_SNP [dm3] 3L_11350878_SNP [dm6]	A	T	3.828e^-6	0.029	INTERGENIC
X	6645634	X_6645634_SNP [dm3] X_6751601_SNP [dm6]	G	T	3.924e^-6	0.029	INTRON CG14439
3R	17372070	3R_17372070_SNP [dm3] 3R_21546348_SNP [dm6]	C	T	3.927e^-6	0.029	INTERGENIC
3L	20741226	3L_20741226_SNP [dm3] 3L_20748126_SNP [dm6]	T	C	4.067e^-6	0.03	INTERGENIC	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3R	20928835	3R_20928835_SNP [dm3] 3R_25103113_SNP [dm6]	C	T	4.147e^-6	0.03	NON_SYNONYMOUS_CODING CG45095 DOWNSTREAM CG33095 & 2 others	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	18604464	2R_18604464_SNP [dm3] 2R_22716959_SNP [dm6]	C	T	4.154e^-6	0.03	SYNONYMOUS_CODING CG30268 DOWNSTREAM jbug
2R	17802749	2R_17802749_SNP [dm3] 2R_21915244_SNP [dm6]	A	T	4.170e^-6	0.03	INTRON Fili
3L	8837588	3L_8837588_SNP [dm3] 3L_8844488_SNP [dm6]	T	A	4.206e^-6	0.03	INTRON dally
3R	22126889	3R_22126889_DEL [dm3] 3R_26301167_DEL [dm6]	TAATG	A	4.231e^-6	0.03	INTERGENIC
3L	3547340	3L_3547340_SNP [dm3] 3L_3547340_SNP [dm6]	G	A	4.233e^-6	0.03	INTRON Eip63E
3L	9949596	3L_9949596_SNP [dm3] 3L_9956496_SNP [dm6]	G	A	4.240e^-6	0.03	INTRON CG34356
2R	18751673	2R_18751673_SNP [dm3] 2R_22864150_SNP [dm6]	C	T	4.287e^-6	0.031	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd mE1_TFBS_HSA mE1_TFBS_sens
3R	10056317	3R_10056317_SNP [dm3] 3R_14230595_SNP [dm6]	A	G	4.355e^-6	0.031	INTERGENIC
2R	18544363	2R_18544363_SNP [dm3] 2R_22656858_SNP [dm6]	A	G	4.383e^-6	0.031	SYNONYMOUS_CODING CG43325 START_GAINED CG43326 UTR_5_PRIME CG43326 UPSTREAM CG43326 DOWNSTREAM CR45268	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
X	8129879	X_8129879_SNP [dm3] X_8235846_SNP [dm6]	C	G	4.387e^-6	0.031	INTRON sdt	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	8422162	X_8422162_SNP [dm3] X_8528129_SNP [dm6]	G	A	4.395e^-6	0.031	SYNONYMOUS_CODING PIP82 INTRON Nrg	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
X	8422166	X_8422166_SNP [dm3] X_8528133_SNP [dm6]	T	G	4.395e^-6	0.031	NON_SYNONYMOUS_CODING PIP82 INTRON Nrg	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
X	8422168	X_8422168_SNP [dm3] X_8528135_SNP [dm6]	T	G	4.395e^-6	0.031	SYNONYMOUS_CODING PIP82 INTRON Nrg	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3R	15820991	3R_15820991_SNP [dm3] 3R_19995269_SNP [dm6]	A	G	4.425e^-6	0.031	INTRON Hs6st	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15821014	3R_15821014_SNP [dm3] 3R_19995292_SNP [dm6]	A	C	4.425e^-6	0.031	INTRON Hs6st	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15821063	3R_15821063_SNP [dm3] 3R_19995341_SNP [dm6]	T	C	4.425e^-6	0.031	INTRON Hs6st	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15407417	3R_15407417_DEL [dm3] 3R_19581695_DEL [dm6]	TTTAATAATATCACCGAATC...	T	4.449e^-6	0.031	INTRON Dys
3R	17879230	3R_17879230_SNP [dm3] 3R_22053508_SNP [dm6]	G	A	4.505e^-6	0.031	INTRON how	regulatory region REDfly_CRMs
3R	26781654	3R_26781654_SNP [dm3] 3R_30955932_SNP [dm6]	T	G	4.548e^-6	0.031	INTERGENIC
3R	21512937	3R_21512937_SNP [dm3] 3R_25687215_SNP [dm6]	C	G	4.601e^-6	0.031	UPSTREAM CLS INTRON CLS	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad
3R	13138108	3R_13138108_SNP [dm3] 3R_17312386_SNP [dm6]	C	T	4.655e^-6	0.031	INTERGENIC
3L	10693750	3L_10693750_SNP [dm3] 3L_10700650_SNP [dm6]	T	G	4.655e^-6	0.031	INTERGENIC
2R	17561294	2R_17561294_SNP [dm3] 2R_21673789_SNP [dm6]	G	A	4.705e^-6	0.032	DOWNSTREAM CG15676 INTERGENIC
2R	3789161	2R_3789161_SNP [dm3] 2R_7901656_SNP [dm6]	G	A	4.832e^-6	0.032	INTRON CG30377	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	4954762	X_4954762_SNP [dm3] X_5060729_SNP [dm6]	A	G	4.843e^-6	0.032	INTRON CR44833 & 1 other
2L	1285359	2L_1285359_SNP [dm3] 2L_1285359_SNP [dm6]	G	A	4.846e^-6	0.032	SYNONYMOUS_CODING robo3
2L	7020602	2L_7020602_SNP [dm3] 2L_7020602_SNP [dm6]	C	T	4.862e^-6	0.032	INTRON ade3
3R	14798817	3R_14798817_SNP [dm3] 3R_18973095_SNP [dm6]	C	G	4.886e^-6	0.032	SYNONYMOUS_CODING CG42613 UTR_3_PRIME CG43732	TF binding site mE1_TFBS_chinmo
3L	3266601	3L_3266601_SNP [dm3] 3L_3266601_SNP [dm6]	C	T	4.946e^-6	0.033	START_GAINED ckd UTR_5_PRIME ckd	TF binding site BDTNP1_TFBS_dl
3R	20491360	3R_20491360_INS [dm3] 3R_24665638_INS [dm6]	C	CG	5.029e^-6	0.033	INTRON slo	regulatory region REDfly_CRMs
3L	11343705	3L_11343705_SNP [dm3] 3L_11350605_SNP [dm6]	G	T	5.049e^-6	0.033	UPSTREAM CR45251 INTERGENIC
3R	16344059	3R_16344059_SNP [dm3] 3R_20518337_SNP [dm6]	A	G	5.164e^-6	0.034	INTERGENIC
2R	9156674	2R_9156674_SNP [dm3] 2R_13269169_SNP [dm6]	C	T	5.199e^-6	0.034	INTRON Dh31-R	TF binding site mE1_TFBS_cad
3R	15824318	3R_15824318_SNP [dm3] 3R_19998596_SNP [dm6]	C	A	5.302e^-6	0.034	INTRON Hs6st	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	21724588	3R_21724588_SNP [dm3] 3R_25898866_SNP [dm6]	G	A	5.331e^-6	0.034	SYNONYMOUS_CODING MCO3	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	13811302	3R_13811302_SNP [dm3] 3R_17985580_SNP [dm6]	C	A	5.370e^-6	0.035	INTRON cpo
3R	26253911	3R_26253911_SNP [dm3] 3R_30428189_SNP [dm6]	G	A	5.397e^-6	0.035	UTR_5_PRIME CG2218 UPSTREAM CG15533 & 1 other	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	26253962	3R_26253962_SNP [dm3] 3R_30428240_SNP [dm6]	A	G	5.397e^-6	0.035	UTR_5_PRIME CG2218 UPSTREAM CG15533 & 1 other	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	19875880	X_19875880_SNP [dm3] X_19981847_SNP [dm6]	T	C	5.517e^-6	0.035	INTERGENIC
2L	3018189	2L_3018189_SNP [dm3] 2L_3018189_SNP [dm6]	C	T	5.552e^-6	0.035	UTR_5_PRIME CG17224 UPSTREAM CG17264 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	20151078	3L_20151078_SNP [dm3] 3L_20157978_SNP [dm6]	A	C	5.587e^-6	0.035	INTRON CG42674
3L	7598757	3L_7598757_SNP [dm3] 3L_7605657_SNP [dm6]	C	T	5.649e^-6	0.036	INTRON CG33275	TF binding site mE1_TFBS_HSA
3L	7598776	3L_7598776_SNP [dm3] 3L_7605676_SNP [dm6]	A	C	5.649e^-6	0.036	INTRON CG33275	TF binding site mE1_TFBS_HSA
3L	9564890	3L_9564890_SNP [dm3] 3L_9571790_SNP [dm6]	T	A	5.759e^-6	0.036	INTRON CG42673
2R	17168816	2R_17168816_SNP [dm3] 2R_21281311_SNP [dm6]	A	G	5.816e^-6	0.036	SYNONYMOUS_CODING CG34203 UPSTREAM MFS16 DOWNSTREAM Rgk3
3R	3974612	3R_3974612_SNP [dm3] 3R_8148890_SNP [dm6]	T	C	5.852e^-6	0.036	UTR_3_PRIME grn
3L	15529389	3L_15529389_SNP [dm3] 3L_15536289_SNP [dm6]	A	T	5.853e^-6	0.036	START_GAINED CrebA UTR_5_PRIME CrebA	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	10055872	3R_10055872_SNP [dm3] 3R_14230150_SNP [dm6]	C	G	5.908e^-6	0.037	INTERGENIC
X	4242733	X_4242733_SNP [dm3] X_4348700_SNP [dm6]	T	C	5.957e^-6	0.037	INTRON norpA
3L	11064957	3L_11064957_SNP [dm3] 3L_11071857_SNP [dm6]	A	G	5.966e^-6	0.037	SYNONYMOUS_CODING Mocs1
3R	20491363	3R_20491363_SNP [dm3] 3R_24665641_SNP [dm6]	T	A	5.970e^-6	0.037	INTRON slo	regulatory region REDfly_CRMs
3L	23166553	3L_23166553_SNP [dm3] 3L_23173453_SNP [dm6]	A	G	5.994e^-6	0.037	INTERGENIC
3L	11064939	3L_11064939_SNP [dm3] 3L_11071839_SNP [dm6]	C	A	6.105e^-6	0.037	SYNONYMOUS_CODING Mocs1
3R	14239354	3R_14239354_DEL [dm3] 3R_18413632_DEL [dm6]	TTT	T	6.122e^-6	0.037	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	11203902	3R_11203902_SNP [dm3] 3R_15378180_SNP [dm6]	G	T	6.208e^-6	0.037	INTRON Rbp
3L	20741133	3L_20741133_SNP [dm3] 3L_20748033_SNP [dm6]	A	T	6.272e^-6	0.038	INTERGENIC	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
2R	17135675	2R_17135675_SNP [dm3] 2R_21248170_SNP [dm6]	G	A	6.298e^-6	0.038	INTRON ASPP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17135783	2R_17135783_SNP [dm3] 2R_21248278_SNP [dm6]	C	G	6.298e^-6	0.038	INTRON ASPP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8746366	3L_8746366_SNP [dm3] 3L_8753266_SNP [dm6]	G	C	6.333e^-6	0.038	UPSTREAM Fhos INTERGENIC
3R	15404808	3R_15404808_INS [dm3] 3R_19579086_INS [dm6]	C	TTGAACAGT	6.406e^-6	0.038	INTRON Dys
3L	20788043	3L_20788043_SNP [dm3] 3L_20794943_SNP [dm6]	A	C	6.417e^-6	0.038	DOWNSTREAM CR43705 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_twi
3R	17762005	3R_17762005_SNP [dm3] 3R_21936283_SNP [dm6]	C	T	6.468e^-6	0.038	INTERGENIC
3R	13775494	3R_13775494_SNP [dm3] 3R_17949772_SNP [dm6]	C	T	6.485e^-6	0.038	INTRON cpo	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3L	1513727	3L_1513727_SNP [dm3] 3L_1513727_SNP [dm6]	G	A	6.492e^-6	0.038	INTRON Psa & 1 other
3L	20071375	3L_20071375_SNP [dm3] 3L_20078275_SNP [dm6]	T	A	6.505e^-6	0.038	INTRON sNPF-R
2R	13709141	2R_13709141_SNP [dm3] 2R_17821636_SNP [dm6]	A	T	6.512e^-6	0.038	INTRON grh	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi transposable element FlyBase
3R	22798957	3R_22798957_SNP [dm3] 3R_26973235_SNP [dm6]	G	A	6.552e^-6	0.038	SYNONYMOUS_CODING CG5521	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	4441396	2L_4441396_SNP [dm3] 2L_4441396_SNP [dm6]	C	T	6.558e^-6	0.038	UPSTREAM CG15431 & 1 other DOWNSTREAM Sfp24F INTERGENIC	TF binding site mE1_TFBS_Trl
2R	20222009	2R_20222009_SNP [dm3] 2R_24334486_SNP [dm6]	G	A	6.661e^-6	0.038	UPSTREAM slbo DOWNSTREAM CR44282 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2R	20222413	2R_20222413_SNP [dm3] 2R_24334890_SNP [dm6]	A	C	6.661e^-6	0.038	UPSTREAM slbo EXON CR44282	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
3R	25839959	3R_25839959_SNP [dm3] 3R_30014237_SNP [dm6]	G	C	6.700e^-6	0.038	INTRON CG7920
3R	12496224	3R_12496224_SNP [dm3] 3R_16670502_SNP [dm6]	A	G	6.941e^-6	0.04	INTRON Ubx
2R	17139415	2R_17139415_SNP [dm3] 2R_21251910_SNP [dm6]	G	T	7.021e^-6	0.04	UPSTREAM ASPP INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_Trl
3L	1385774	3L_1385774_SNP [dm3] 3L_1385774_SNP [dm6]	T	C	7.104e^-6	0.04	INTRON Ptp61F & 1 other	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3R	15821043	3R_15821043_SNP [dm3] 3R_19995321_SNP [dm6]	C	A	7.144e^-6	0.041	INTRON Hs6st	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	11184737	3R_11184737_SNP [dm3] 3R_15359015_SNP [dm6]	G	T	7.191e^-6	0.041	UTR_3_PRIME ldlCp & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	15995447	X_15995447_SNP [dm3] X_16101414_SNP [dm6]	A	T	7.212e^-6	0.041	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	1969693	2L_1969693_SNP [dm3] 2L_1969693_SNP [dm6]	A	C	7.267e^-6	0.041	INTRON erm	TF binding site BDTNP1_TFBS_dl
3R	22789743	3R_22789743_SNP [dm3] 3R_26964021_SNP [dm6]	C	T	7.471e^-6	0.042	INTRON Tsp97E	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	18677688	2R_18677688_SNP [dm3] 2R_22790183_SNP [dm6]	A	T	7.497e^-6	0.042	INTRON CG42260
3R	21640168	3R_21640168_SNP [dm3] 3R_25814446_SNP [dm6]	T	C	7.588e^-6	0.042	INTERGENIC
3L	20741117	3L_20741117_SNP [dm3] 3L_20748017_SNP [dm6]	G	T	7.628e^-6	0.042	INTERGENIC	TF binding site mE1_TFBS_HSA
2R	14964246	2R_14964246_SNP [dm3] 2R_19076741_SNP [dm6]	A	T	7.742e^-6	0.042	INTRON 5-HT1A	TF binding site mE1_TFBS_inv
3L	20154160	3L_20154160_SNP [dm3] 3L_20161060_SNP [dm6]	A	G	7.744e^-6	0.042	INTRON CG42674
2R	20222370	2R_20222370_SNP [dm3] 2R_24334847_SNP [dm6]	G	T	7.817e^-6	0.042	UPSTREAM slbo EXON CR44282	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo
2R	14433598	2R_14433598_SNP [dm3] 2R_18546093_SNP [dm6]	G	T	7.866e^-6	0.042	SYNONYMOUS_CODING Rgk2	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_inv
3R	17042597	3R_17042597_SNP [dm3] 3R_21216875_SNP [dm6]	C	A	7.882e^-6	0.042	DOWNSTREAM CG5862 & 1 other EXON CR43975
3R	25329985	3R_25329985_SNP [dm3] 3R_29504263_SNP [dm6]	C	A	7.884e^-6	0.042	UPSTREAM Trc8 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	3514639	3L_3514639_SNP [dm3] 3L_3514639_SNP [dm6]	T	C	7.887e^-6	0.042	INTERGENIC
3R	13757188	3R_13757188_DEL [dm3] 3R_17931466_DEL [dm6]	ATT	A	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3R	13757205	3R_13757205_DEL [dm3] 3R_17931483_DEL [dm6]	ATGA	A	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3R	13757214	3R_13757214_DEL [dm3] 3R_17931492_DEL [dm6]	AAG	A	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3R	13757231	3R_13757231_SNP [dm3] 3R_17931509_SNP [dm6]	C	A	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3R	13757248	3R_13757248_SNP [dm3] 3R_17931526_SNP [dm6]	G	A	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3R	13757249	3R_13757249_SNP [dm3] 3R_17931527_SNP [dm6]	A	G	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3R	13757252	3R_13757252_MNP [dm3] 3R_17931530_MNP [dm6]	GAC	CTT	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3R	13757255	3R_13757255_DEL [dm3] 3R_17931533_DEL [dm6]	AT	A	7.895e^-6	0.042	UPSTREAM cpo INTRON cpo
3L	9517411	3L_9517411_SNP [dm3] 3L_9524311_SNP [dm6]	G	A	7.934e^-6	0.042	INTRON CG33700
3L	1621834	3L_1621834_SNP [dm3] 3L_1621834_SNP [dm6]	G	A	8.112e^-6	0.043	SYNONYMOUS_CODING ABCB7	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	17074659	2R_17074659_SNP [dm3] 2R_21187154_SNP [dm6]	G	A	8.151e^-6	0.043	SYNONYMOUS_CODING tud	TF binding site mE1_TFBS_sens
2R	17074680	2R_17074680_SNP [dm3] 2R_21187175_SNP [dm6]	G	T	8.151e^-6	0.043	SYNONYMOUS_CODING tud	TF binding site mE1_TFBS_sens
2R	11755421	2R_11755421_SNP [dm3] 2R_15867916_SNP [dm6]	C	A	8.157e^-6	0.043	NON_SYNONYMOUS_CODING Rif1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	17772590	3R_17772590_SNP [dm3] 3R_21946868_SNP [dm6]	G	A	8.256e^-6	0.043	INTERGENIC
3R	26490766	3R_26490766_SNP [dm3] 3R_30665044_SNP [dm6]	T	A	8.552e^-6	0.044	EXON CR45191
2R	19164276	2R_19164276_SNP [dm3] 2R_23276753_SNP [dm6]	G	A	8.566e^-6	0.044	INTERGENIC
3R	22124888	3R_22124888_SNP [dm3] 3R_26299166_SNP [dm6]	C	T	8.587e^-6	0.044	INTERGENIC
3L	10343728	3L_10343728_INS [dm3] 3L_10350628_INS [dm6]	C	CAA	8.647e^-6	0.045	INTRON CR44327
3R	18555558	3R_18555558_SNP [dm3] 3R_22729836_SNP [dm6]	C	T	8.701e^-6	0.045	SYNONYMOUS_CODING CG45049
3R	15813854	3R_15813854_SNP [dm3] 3R_19988132_SNP [dm6]	C	T	8.720e^-6	0.045	INTRON Hs6st	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	1381214	2R_1381214_SNP [dm3] 2R_5493709_SNP [dm6]	G	A	8.730e^-6	0.045	INTRON CG30440
2L	9563176	2L_9563176_SNP [dm3] 2L_9563176_SNP [dm6]	G	A	8.787e^-6	0.045	INTRON jp
3L	15541522	3L_15541522_SNP [dm3] 3L_15548422_SNP [dm6]	C	A	8.791e^-6	0.045	INTRON CrebA	TF binding site BDTNP1_TFBS_hb
3L	7618706	3L_7618706_SNP [dm3] 3L_7625606_SNP [dm6]	C	T	8.816e^-6	0.045	SYNONYMOUS_CODING CG33275	TF binding site mE1_TFBS_chinmo mE1_TFBS_inv
3R	23437003	3R_23437003_SNP [dm3] 3R_27611281_SNP [dm6]	G	C	8.839e^-6	0.045	INTRON Tusp
3R	7149125	3R_7149125_SNP [dm3] 3R_11323403_SNP [dm6]	G	A	8.896e^-6	0.045	INTERGENIC
2R	16908907	2R_16908907_SNP [dm3] 2R_21021402_SNP [dm6]	C	T	8.928e^-6	0.045	INTRON RIC-3
3R	1862786	3R_1862786_SNP [dm3] 3R_6037064_SNP [dm6]	T	A	8.966e^-6	0.045	INTERGENIC
3L	19667201	3L_19667201_SNP [dm3] 3L_19674101_SNP [dm6]	A	T	9.017e^-6	0.045	INTERGENIC
2R	7962897	2R_7962897_SNP [dm3] 2R_12075392_SNP [dm6]	C	G	9.047e^-6	0.045	INTRON CG8888
2R	11204494	2R_11204494_SNP [dm3] 2R_15316989_SNP [dm6]	G	T	9.143e^-6	0.045	NON_SYNONYMOUS_CODING mus210 DOWNSTREAM CG8155	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	25095199	3R_25095199_SNP [dm3] 3R_29269477_SNP [dm6]	T	A	9.155e^-6	0.045	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	16304569	2R_16304569_SNP [dm3] 2R_20417064_SNP [dm6]	A	T	9.161e^-6	0.045	INTERGENIC
3R	15061872	3R_15061872_SNP [dm3] 3R_19236150_SNP [dm6]	A	T	9.296e^-6	0.046	INTRON unc79
2R	19773223	2R_19773223_SNP [dm3] 2R_23885700_SNP [dm6]	A	G	9.303e^-6	0.046	INTERGENIC
3R	19538564	3R_19538564_SNP [dm3] 3R_23712842_SNP [dm6]	T	G	9.436e^-6	0.046	UTR_3_PRIME CG10300 & 1 other
3R	11696511	3R_11696511_SNP [dm3] 3R_15870789_SNP [dm6]	A	G	9.474e^-6	0.046	INTRON CG31183
3R	11697071	3R_11697071_SNP [dm3] 3R_15871349_SNP [dm6]	A	G	9.474e^-6	0.046	INTRON CG31183
3R	11698247	3R_11698247_SNP [dm3] 3R_15872525_SNP [dm6]	T	A	9.474e^-6	0.046	INTRON CG31183
2L	4098697	2L_4098697_SNP [dm3] 2L_4098697_SNP [dm6]	G	A	9.589e^-6	0.046	SYNONYMOUS_CODING ed	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	20088725	2L_20088725_SNP [dm3] 2L_20088725_SNP [dm6]	C	G	9.596e^-6	0.046	NON_SYNONYMOUS_CODING neb DOWNSTREAM CG10747	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	16701534	2L_16701534_SNP [dm3] 2L_16701534_SNP [dm6]	A	G	9.615e^-6	0.046	UPSTREAM CR43669 EXON CR43670	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	16701535	2L_16701535_SNP [dm3] 2L_16701535_SNP [dm6]	A	C	9.615e^-6	0.046	UPSTREAM CR43669 EXON CR43670	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2L	16701563	2L_16701563_SNP [dm3] 2L_16701563_SNP [dm6]	A	G	9.615e^-6	0.046	UPSTREAM CR43669 EXON CR43670	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	14609897	3L_14609897_SNP [dm3] 3L_14616797_SNP [dm6]	C	A	9.657e^-6	0.046	INTRON shd
3L	14609938	3L_14609938_SNP [dm3] 3L_14616838_SNP [dm6]	A	G	9.657e^-6	0.046	INTRON shd
X	5511856	X_5511856_SNP [dm3] X_5617823_SNP [dm6]	C	G	9.664e^-6	0.046	INTRON RhoGAP5A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_HSA
2R	14963294	2R_14963294_SNP [dm3] 2R_19075789_SNP [dm6]	T	C	9.695e^-6	0.046	INTRON 5-HT1A
3R	13886125	3R_13886125_SNP [dm3] 3R_18060403_SNP [dm6]	A	C	9.753e^-6	0.046	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	20466592	3R_20466592_SNP [dm3] 3R_24640870_SNP [dm6]	G	A	9.948e^-6	0.047	SYNONYMOUS_CODING puf
X	12012568	X_12012568_INS [dm3] X_12118535_INS [dm6]	T	TTTT	9.948e^-6	0.047	INTRON Ten-a
X	12012631	X_12012631_SNP [dm3] X_12118598_SNP [dm6]	G	A	9.948e^-6	0.047	INTRON Ten-a
X	12012634	X_12012634_SNP [dm3] X_12118601_SNP [dm6]	T	C	9.948e^-6	0.047	INTRON Ten-a
2L	20092574	2L_20092574_SNP [dm3] 2L_20092574_SNP [dm6]	G	A	9.965e^-6	0.047	SYNONYMOUS_CODING CG10721 DOWNSTREAM Taf13	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	4019491	3R_4019491_SNP [dm3] 3R_8193769_SNP [dm6]	T	G	1.010e^-5	0.047	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	12583648	2L_12583648_SNP [dm3] 2L_12583648_SNP [dm6]	T	G	1.016e^-5	0.047	DOWNSTREAM CR44596 & 1 other INTERGENIC
3R	19851277	3R_19851277_SNP [dm3] 3R_24025555_SNP [dm6]	T	C	1.017e^-5	0.047	INTRON KrT95D	TF binding site mE1_TFBS_cad
3L	13014945	3L_13014945_SNP [dm3] 3L_13021845_SNP [dm6]	T	A	1.020e^-5	0.047	UPSTREAM AdenoK INTRON AdenoK	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	13014951	3L_13014951_SNP [dm3] 3L_13021851_SNP [dm6]	G	T	1.020e^-5	0.047	UPSTREAM AdenoK INTRON AdenoK	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	1103422	X_1103422_SNP [dm3] X_1209389_SNP [dm6]	C	T	1.039e^-5	0.048	UPSTREAM CG11382 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	25103753	3R_25103753_SNP [dm3] 3R_29278031_SNP [dm6]	A	G	1.044e^-5	0.048	UPSTREAM CR45568 INTERGENIC	regulatory region REDfly_CRMs
3R	10576016	3R_10576016_SNP [dm3] 3R_14750294_SNP [dm6]	T	C	1.048e^-5	0.048	INTRON jvl & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_Trl
2R	13562285	2R_13562285_SNP [dm3] 2R_17674780_SNP [dm6]	G	C	1.050e^-5	0.048	INTRON Sema-1b
X	15995491	X_15995491_SNP [dm3] X_16101458_SNP [dm6]	A	T	1.054e^-5	0.048	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	17188582	2R_17188582_SNP [dm3] 2R_21301077_SNP [dm6]	A	T	1.058e^-5	0.048	UPSTREAM CG42672 INTRON CG42672
2R	19770351	2R_19770351_SNP [dm3] 2R_23882828_SNP [dm6]	A	G	1.065e^-5	0.048	UTR_5_PRIME CG4882 UPSTREAM CG4882 DOWNSTREAM PHDP	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	21376144	3L_21376144_SNP [dm3] 3L_21383044_SNP [dm6]	G	T	1.067e^-5	0.048	UTR_5_PRIME rgn
3L	18316689	3L_18316689_DEL [dm3] 3L_18323589_DEL [dm6]	TT	T	1.068e^-5	0.048	INTERGENIC	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	5656348	2R_5656348_SNP [dm3] 2R_9768843_SNP [dm6]	A	G	1.073e^-5	0.049	INTRON CG1688	TF binding site mE1_TFBS_HSA
3R	10043131	3R_10043131_SNP [dm3] 3R_14217409_SNP [dm6]	A	G	1.086e^-5	0.049	DOWNSTREAM CG31326 INTRON CG9649
3R	13177649	3R_13177649_SNP [dm3] 3R_17351927_SNP [dm6]	G	A	1.095e^-5	0.049	INTRON beat-IIa
3R	14239325	3R_14239325_DEL [dm3] 3R_18413603_DEL [dm6]	TTAAAGTTAGT...	T	1.099e^-5	0.049	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	14239340	3R_14239340_SNP [dm3] 3R_18413618_SNP [dm6]	A	T	1.099e^-5	0.049	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	21262522	X_21262522_SNP [dm3] X_21391495_SNP [dm6]	T	C	1.108e^-5	0.049	UTR_3_PRIME mst DOWNSTREAM mst	TF binding site mE1_TFBS_kn
X	21262524	X_21262524_SNP [dm3] X_21391497_SNP [dm6]	T	A	1.108e^-5	0.049	UTR_3_PRIME mst DOWNSTREAM mst	TF binding site mE1_TFBS_kn
3R	19203927	3R_19203927_SNP [dm3] 3R_23378205_SNP [dm6]	T	C	1.110e^-5	0.049	INTRON CG4393	TF binding site mE1_TFBS_inv
3R	19203928	3R_19203928_SNP [dm3] 3R_23378206_SNP [dm6]	T	A	1.110e^-5	0.049	INTRON CG4393	TF binding site mE1_TFBS_inv
3R	19203933	3R_19203933_SNP [dm3] 3R_23378211_SNP [dm6]	G	A	1.110e^-5	0.049	INTRON CG4393	TF binding site mE1_TFBS_inv
3L	15570978	3L_15570978_SNP [dm3] 3L_15577878_SNP [dm6]	C	A	1.118e^-5	0.049	NON_SYNONYMOUS_CODING CG16979 DOWNSTREAM mrn	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	12012587	X_12012587_INS [dm3] X_12118554_INS [dm6]	A	ACTTAAA	1.127e^-5	0.049	INTRON Ten-a
X	12012584	X_12012584_SNP [dm3] X_12118551_SNP [dm6]	G	T	1.128e^-5	0.049	INTRON Ten-a
2L	12154644	2L_12154644_SNP [dm3] 2L_12154644_SNP [dm6]	T	C	1.133e^-5	0.049	INTRON CG31760
2R	14597953	2R_14597953_SNP [dm3] 2R_18710448_SNP [dm6]	C	A	1.137e^-5	0.049	SYNONYMOUS_CODING CG15087 UPSTREAM pncr016:2R	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3R	26442595	3R_26442595_SNP [dm3] 3R_30616873_SNP [dm6]	G	C	1.138e^-5	0.049	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26442669	3R_26442669_SNP [dm3] 3R_30616947_SNP [dm6]	T	C	1.138e^-5	0.049	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12012701	X_12012701_SNP [dm3] X_12118668_SNP [dm6]	A	G	1.138e^-5	0.049	INTRON Ten-a
2L	18395615	2L_18395615_SNP [dm3] 2L_18395615_SNP [dm6]	A	T	1.147e^-5	0.049	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	21500071	3R_21500071_SNP [dm3] 3R_25674349_SNP [dm6]	A	C	1.152e^-5	0.049	INTRON Lgr3
3R	21509607	3R_21509607_SNP [dm3] 3R_25683885_SNP [dm6]	G	A	1.152e^-5	0.049	UTR_3_PRIME RpL27 DOWNSTREAM RpL27 & 1 other
3R	21511031	3R_21511031_SNP [dm3] 3R_25685309_SNP [dm6]	G	T	1.152e^-5	0.049	UTR_3_PRIME CLS UPSTREAM RpL27	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	2134212	3R_2134212_SNP [dm3] 3R_6308490_SNP [dm6]	G	A	1.155e^-5	0.049	SYNONYMOUS_CODING CG31556	TF binding site mE1_TFBS_HSA
X	13501579	X_13501579_INS [dm3] X_13607546_INS [dm6]	A	ATGTA	1.156e^-5	0.049	INTRON CG11178	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	13501633	X_13501633_SNP [dm3] X_13607600_SNP [dm6]	T	A	1.156e^-5	0.049	INTRON CG11178	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	14609826	3L_14609826_SNP [dm3] 3L_14616726_SNP [dm6]	T	G	1.157e^-5	0.049	INTRON shd
3R	15402335	3R_15402335_SNP [dm3] 3R_19576613_SNP [dm6]	T	A	1.166e^-5	0.05	INTRON Dys
3R	15402381	3R_15402381_MNP [dm3] 3R_19576659_MNP [dm6]	TAC	ATT	1.166e^-5	0.05	INTRON Dys
3R	13137962	3R_13137962_SNP [dm3] 3R_17312240_SNP [dm6]	A	G	1.192e^-5	0.05	INTERGENIC
3R	17814124	3R_17814124_SNP [dm3] 3R_21988402_SNP [dm6]	C	G	1.194e^-5	0.05	INTRON Eip93F
3L	9788332	3L_9788332_SNP [dm3] 3L_9795232_SNP [dm6]	C	G	1.202e^-5	0.051	INTRON Zasp67
3R	15641952	3R_15641952_SNP [dm3] 3R_19816230_SNP [dm6]	A	G	1.203e^-5	0.051	INTRON bnl
3R	14239297	3R_14239297_SNP [dm3] 3R_18413575_SNP [dm6]	C	A	1.220e^-5	0.051	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	17046464	2R_17046464_SNP [dm3] 2R_21158959_SNP [dm6]	A	G	1.221e^-5	0.051	UPSTREAM CG30389 INTRON CG30389	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	11698482	3R_11698482_SNP [dm3] 3R_15872760_SNP [dm6]	A	C	1.226e^-5	0.051	INTRON CG31183
3L	11605108	3L_11605108_SNP [dm3] 3L_11612008_SNP [dm6]	A	C	1.239e^-5	0.052	NON_SYNONYMOUS_CODING Muc68Ca	TF binding site mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
2L	4651889	2L_4651889_SNP [dm3] 2L_4651889_SNP [dm6]	A	G	1.248e^-5	0.052	SYNONYMOUS_CODING CG3355	TF binding site mE1_TFBS_chinmo
X	6744419	X_6744419_SNP [dm3] X_6850386_SNP [dm6]	C	A	1.252e^-5	0.052	SYNONYMOUS_CODING CG4558 UPSTREAM Cht11	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	11755452	2R_11755452_SNP [dm3] 2R_15867947_SNP [dm6]	T	C	1.280e^-5	0.053	SYNONYMOUS_CODING Rif1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_sens
2R	11755470	2R_11755470_SNP [dm3] 2R_15867965_SNP [dm6]	G	A	1.280e^-5	0.053	SYNONYMOUS_CODING Rif1	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_sens
3R	26442698	3R_26442698_SNP [dm3] 3R_30616976_SNP [dm6]	G	A	1.291e^-5	0.053	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	18316694	3L_18316694_SNP [dm3] 3L_18323594_SNP [dm6]	A	T	1.292e^-5	0.053	INTERGENIC	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26878334	3R_26878334_SNP [dm3] 3R_31052612_SNP [dm6]	G	C	1.297e^-5	0.053	DOWNSTREAM l_3_03670 & 1 other INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	24167078	3R_24167078_SNP [dm3] 3R_28341356_SNP [dm6]	C	T	1.302e^-5	0.053	INTRON Moca-cyp	TF binding site mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA
2L	6990787	2L_6990787_SNP [dm3] 2L_6990787_SNP [dm6]	A	C	1.303e^-5	0.053	INTRON uif
3R	26017009	3R_26017009_SNP [dm3] 3R_30191287_SNP [dm6]	C	T	1.311e^-5	0.053	UPSTREAM CG9747 INTERGENIC
3R	25095146	3R_25095146_SNP [dm3] 3R_29269424_SNP [dm6]	G	A	1.329e^-5	0.054	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	16900411	3R_16900411_SNP [dm3] 3R_21074689_SNP [dm6]	T	C	1.336e^-5	0.054	INTRON dmrt93B
3R	21482948	3R_21482948_SNP [dm3] 3R_25657226_SNP [dm6]	G	A	1.336e^-5	0.054	SYNONYMOUS_CODING Tnks	TF binding site mE1_TFBS_chinmo
3L	10050721	3L_10050721_SNP [dm3] 3L_10057621_SNP [dm6]	T	A	1.338e^-5	0.054	INTRON dpr6
2R	13556691	2R_13556691_SNP [dm3] 2R_17669186_SNP [dm6]	G	T	1.347e^-5	0.054	UTR_3_PRIME eIF3-S8 UPSTREAM CG30108 & 1 other DOWNSTREAM eIF3-S8	TF binding site BDTNP1_TFBS_Med mE1_TFBS_cnc
3L	8746340	3L_8746340_SNP [dm3] 3L_8753240_SNP [dm6]	T	C	1.347e^-5	0.054	UPSTREAM Fhos INTERGENIC
3R	21510713	3R_21510713_SNP [dm3] 3R_25684991_SNP [dm6]	T	A	1.356e^-5	0.054	UTR_5_PRIME RpL27 DOWNSTREAM CLS INTRON RpL27	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	14609765	3L_14609765_SNP [dm3] 3L_14616665_SNP [dm6]	A	T	1.360e^-5	0.055	UTR_5_PRIME shd INTRON shd
2L	9485921	2L_9485921_SNP [dm3] 2L_9485921_SNP [dm6]	C	G	1.371e^-5	0.055	INTERGENIC
2R	4084432	2R_4084432_SNP [dm3] 2R_8196927_SNP [dm6]	A	C	1.402e^-5	0.055	INTRON LRP1
3L	11442173	3L_11442173_SNP [dm3] 3L_11449073_SNP [dm6]	A	T	1.404e^-5	0.055	INTERGENIC
3L	11277803	3L_11277803_SNP [dm3] 3L_11284703_SNP [dm6]	G	T	1.407e^-5	0.055	UPSTREAM CR45404 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	9896194	3L_9896194_SNP [dm3] 3L_9903094_SNP [dm6]	A	T	1.407e^-5	0.055	DOWNSTREAM nudE INTERGENIC
2L	1728749	2L_1728749_SNP [dm3] 2L_1728749_SNP [dm6]	T	C	1.412e^-5	0.055	UTR_5_PRIME Rrp40 UPSTREAM Eno INTRON Eno	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
X	15995475	X_15995475_SNP [dm3] X_16101442_SNP [dm6]	A	G	1.414e^-5	0.055	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	22122582	3R_22122582_SNP [dm3] 3R_26296860_SNP [dm6]	G	T	1.418e^-5	0.055	INTERGENIC
3R	22122641	3R_22122641_SNP [dm3] 3R_26296919_SNP [dm6]	C	T	1.418e^-5	0.055	INTERGENIC
3R	22122652	3R_22122652_SNP [dm3] 3R_26296930_SNP [dm6]	G	A	1.418e^-5	0.055	INTERGENIC
3R	22124394	3R_22124394_SNP [dm3] 3R_26298672_SNP [dm6]	A	T	1.418e^-5	0.055	INTERGENIC
3R	22127285	3R_22127285_SNP [dm3] 3R_26301563_SNP [dm6]	G	A	1.418e^-5	0.055	INTERGENIC
3R	22127366	3R_22127366_SNP [dm3] 3R_26301644_SNP [dm6]	G	A	1.418e^-5	0.055	INTERGENIC
3R	22127387	3R_22127387_SNP [dm3] 3R_26301665_SNP [dm6]	C	T	1.418e^-5	0.055	INTERGENIC
3R	22127600	3R_22127600_SNP [dm3] 3R_26301878_SNP [dm6]	T	G	1.418e^-5	0.055	INTERGENIC
3R	22127604	3R_22127604_SNP [dm3] 3R_26301882_SNP [dm6]	T	A	1.418e^-5	0.055	INTERGENIC
3R	22127798	3R_22127798_SNP [dm3] 3R_26302076_SNP [dm6]	A	C	1.418e^-5	0.055	INTERGENIC
3R	3974608	3R_3974608_SNP [dm3] 3R_8148886_SNP [dm6]	C	A	1.418e^-5	0.055	UTR_3_PRIME grn
3L	19052484	3L_19052484_SNP [dm3] 3L_19059384_SNP [dm6]	C	T	1.420e^-5	0.055	DOWNSTREAM CG3797 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	14694819	2R_14694819_INS [dm3] 2R_18807314_INS [dm6]	A	AA	1.433e^-5	0.055	DOWNSTREAM CR44468 INTERGENIC	TF binding site mE1_TFBS_bab1
3R	14239139	3R_14239139_SNP [dm3] 3R_18413417_SNP [dm6]	G	A	1.434e^-5	0.055	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3R	27292090	3R_27292090_SNP [dm3] 3R_31466368_SNP [dm6]	T	A	1.443e^-5	0.055	INTERGENIC
3R	14614875	3R_14614875_SNP [dm3] 3R_18789153_SNP [dm6]	C	T	1.446e^-5	0.055	INTRON CG7720
3R	25727411	3R_25727411_SNP [dm3] 3R_29901689_SNP [dm6]	C	T	1.451e^-5	0.055	INTRON CG31038
3R	25729448	3R_25729448_SNP [dm3] 3R_29903726_SNP [dm6]	C	A	1.451e^-5	0.055	NON_SYNONYMOUS_CODING CG15517 DOWNSTREAM CG31038	TF binding site mE1_TFBS_bab1
3R	25729467	3R_25729467_SNP [dm3] 3R_29903745_SNP [dm6]	A	C	1.451e^-5	0.055	NON_SYNONYMOUS_CODING CG15517 DOWNSTREAM CG31038	TF binding site mE1_TFBS_bab1
3R	25729485	3R_25729485_SNP [dm3] 3R_29903763_SNP [dm6]	G	A	1.451e^-5	0.055	SYNONYMOUS_CODING CG15517 DOWNSTREAM CG31038	TF binding site mE1_TFBS_bab1
2R	15900837	2R_15900837_SNP [dm3] 2R_20013332_SNP [dm6]	C	A	1.457e^-5	0.055	INTERGENIC
X	3200532	X_3200532_SNP [dm3] X_3306499_SNP [dm6]	A	T	1.459e^-5	0.055	INTRON dnc	TF binding site BDTNP1_TFBS_dl
X	3200696	X_3200696_SNP [dm3] X_3306663_SNP [dm6]	G	A	1.459e^-5	0.055	INTRON dnc	TF binding site BDTNP1_TFBS_dl
2L	4098670	2L_4098670_SNP [dm3] 2L_4098670_SNP [dm6]	G	A	1.474e^-5	0.055	SYNONYMOUS_CODING ed	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3R	16900796	3R_16900796_SNP [dm3] 3R_21075074_SNP [dm6]	G	C	1.479e^-5	0.055	INTRON dmrt93B
3R	20133007	3R_20133007_SNP [dm3] 3R_24307285_SNP [dm6]	C	T	1.480e^-5	0.055	INTRON crb	TF binding site mE1_TFBS_cad
2L	12583728	2L_12583728_SNP [dm3] 2L_12583728_SNP [dm6]	T	A	1.488e^-5	0.056	DOWNSTREAM CR44596 & 1 other INTERGENIC
3L	20106503	3L_20106503_SNP [dm3] 3L_20113403_SNP [dm6]	A	C	1.500e^-5	0.056	UPSTREAM CG14187 INTERGENIC
3R	14213303	3R_14213303_SNP [dm3] 3R_18387581_SNP [dm6]	T	G	1.501e^-5	0.056	SYNONYMOUS_CODING Vha100-4 DOWNSTREAM cona	TF binding site mE1_TFBS_cad
3L	14832878	3L_14832878_SNP [dm3] 3L_14839778_SNP [dm6]	G	T	1.506e^-5	0.056	INTRON CG17839
3L	6632665	3L_6632665_SNP [dm3] 3L_6639565_SNP [dm6]	C	G	1.507e^-5	0.056	INTERGENIC
3L	8686088	3L_8686088_SNP [dm3] 3L_8692988_SNP [dm6]	A	G	1.514e^-5	0.056	EXON CR44526	TF binding site mE1_TFBS_cad
3L	11298931	3L_11298931_SNP [dm3] 3L_11305831_SNP [dm6]	G	A	1.520e^-5	0.056	INTERGENIC	TF binding site mE1_TFBS_cad
3R	16671049	3R_16671049_SNP [dm3] 3R_20845327_SNP [dm6]	G	T	1.521e^-5	0.056	DOWNSTREAM CG15695 INTERGENIC	transposable element FlyBase
3R	17953466	3R_17953466_SNP [dm3] 3R_22127744_SNP [dm6]	C	A	1.527e^-5	0.056	INTRON CG42390
2R	13562286	2R_13562286_SNP [dm3] 2R_17674781_SNP [dm6]	A	T	1.539e^-5	0.056	INTRON Sema-1b
2R	13562296	2R_13562296_SNP [dm3] 2R_17674791_SNP [dm6]	C	A	1.539e^-5	0.056	INTRON Sema-1b
3R	25529635	3R_25529635_SNP [dm3] 3R_29703913_SNP [dm6]	G	A	1.546e^-5	0.056	INTERGENIC
2R	9105907	2R_9105907_SNP [dm3] 2R_13218402_SNP [dm6]	T	A	1.552e^-5	0.056	DOWNSTREAM CG4646 INTRON CG4630
3L	7648234	3L_7648234_SNP [dm3] 3L_7655134_SNP [dm6]	T	A	1.552e^-5	0.056	UPSTREAM CG7492 DOWNSTREAM Ank2 INTRON CG32373	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	14213218	3R_14213218_SNP [dm3] 3R_18387496_SNP [dm6]	T	A	1.562e^-5	0.057	NON_SYNONYMOUS_CODING Vha100-4 DOWNSTREAM cona	TF binding site mE1_TFBS_cad
2R	19755572	2R_19755572_SNP [dm3] 2R_23868049_SNP [dm6]	C	T	1.584e^-5	0.057	SPLICE_SITE_REGION Thiolase INTRON Thiolase	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	7339106	3R_7339106_SNP [dm3] 3R_11513384_SNP [dm6]	G	A	1.598e^-5	0.058	INTERGENIC
3L	23295043	3L_23295043_SNP [dm3] 3L_23301943_SNP [dm6]	T	A	1.606e^-5	0.058	INTERGENIC	transposable element FlyBase
3L	20175960	3L_20175960_SNP [dm3] 3L_20182860_SNP [dm6]	A	G	1.617e^-5	0.058	INTRON CG42674	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	11841895	X_11841895_DEL [dm3] X_11947862_DEL [dm6]	TAT	T	1.619e^-5	0.058	INTRON cac
4	282799	4_282799_SNP [dm3] 4_262173_SNP [dm6]	A	C	1.641e^-5	0.059	UTR_3_PRIME RhoGAP102A INTRON RhoGAP102A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	7956228	2R_7956228_SNP [dm3] 2R_12068723_SNP [dm6]	T	C	1.651e^-5	0.059	INTRON CG8888
3R	22127292	3R_22127292_DEL [dm3] 3R_26301570_DEL [dm6]	AAC	A	1.656e^-5	0.059	INTERGENIC
3R	22127303	3R_22127303_SNP [dm3] 3R_26301581_SNP [dm6]	T	G	1.656e^-5	0.059	INTERGENIC
3R	22127308	3R_22127308_SNP [dm3] 3R_26301586_SNP [dm6]	G	A	1.656e^-5	0.059	INTERGENIC
3R	22127317	3R_22127317_SNP [dm3] 3R_26301595_SNP [dm6]	T	C	1.656e^-5	0.059	INTERGENIC
3R	22127733	3R_22127733_SNP [dm3] 3R_26302011_SNP [dm6]	T	A	1.656e^-5	0.059	INTERGENIC
3L	11277724	3L_11277724_SNP [dm3] 3L_11284624_SNP [dm6]	C	T	1.662e^-5	0.059	UPSTREAM CR45404 INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	25726886	3R_25726886_SNP [dm3] 3R_29901164_SNP [dm6]	G	A	1.684e^-5	0.059	INTRON CG31038
3R	25728409	3R_25728409_SNP [dm3] 3R_29902687_SNP [dm6]	A	T	1.685e^-5	0.059	UTR_3_PRIME CG31038 DOWNSTREAM CG15517
3R	14239315	3R_14239315_SNP [dm3] 3R_18413593_SNP [dm6]	C	G	1.686e^-5	0.059	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	23493582	3R_23493582_SNP [dm3] 3R_27667860_SNP [dm6]	C	A	1.689e^-5	0.059	INTRON unc80
3L	10567881	3L_10567881_SNP [dm3] 3L_10574781_SNP [dm6]	G	T	1.690e^-5	0.059	INTRON A2bp1
3R	10055931	3R_10055931_SNP [dm3] 3R_14230209_SNP [dm6]	T	G	1.701e^-5	0.06	INTERGENIC	TF binding site mE1_TFBS_HSA
3L	17808193	3L_17808193_SNP [dm3] 3L_17815093_SNP [dm6]	G	A	1.728e^-5	0.06	UPSTREAM cln3 DOWNSTREAM Ir75a INTERGENIC
3R	13928218	3R_13928218_SNP [dm3] 3R_18102496_SNP [dm6]	A	G	1.745e^-5	0.061	INTRON sr
2L	10584109	2L_10584109_SNP [dm3] 2L_10584109_SNP [dm6]	T	C	1.747e^-5	0.061	INTRON Trim9
3R	27153006	3R_27153006_DEL [dm3] 3R_31327284_DEL [dm6]	GACCAGAA	G	1.757e^-5	0.061	INTRON CG34347	TF binding site mE1_TFBS_cad
3R	21499699	3R_21499699_SNP [dm3] 3R_25673977_SNP [dm6]	A	T	1.767e^-5	0.061	INTRON Lgr3
3R	1750324	3R_1750324_SNP [dm3] 3R_5924602_SNP [dm6]	T	C	1.773e^-5	0.061	INTRON CG34113
3R	1750349	3R_1750349_DEL [dm3] 3R_5924627_DEL [dm6]	AG	A	1.773e^-5	0.061	INTRON CG34113
4	395399	4_395399_SNP [dm3] 4_374773_SNP [dm6]	G	A	1.774e^-5	0.061	UTR_3_PRIME Hcf DOWNSTREAM Lin29	TF binding site BDTNP1_TFBS_dl
3R	11168387	3R_11168387_SNP [dm3] 3R_15342665_SNP [dm6]	C	G	1.774e^-5	0.061	UTR_3_PRIME Aats-ser DOWNSTREAM Aats-ser & 1 other INTRON CG6218	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	15995488	X_15995488_SNP [dm3] X_16101455_SNP [dm6]	T	C	1.781e^-5	0.061	INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	16337674	X_16337674_SNP [dm3] X_16443641_SNP [dm6]	C	T	1.800e^-5	0.062	SYNONYMOUS_CODING rngo	TF binding site mE1_TFBS_cad
3R	14211371	3R_14211371_SNP [dm3] 3R_18385649_SNP [dm6]	A	T	1.802e^-5	0.062	UPSTREAM cona & 1 other INTERGENIC
3R	25268890	3R_25268890_SNP [dm3] 3R_29443168_SNP [dm6]	C	G	1.814e^-5	0.062	INTRON Ptp99A
3R	25298294	3R_25298294_SNP [dm3] 3R_29472572_SNP [dm6]	C	T	1.819e^-5	0.062	INTRON Ptp99A
3R	26348075	3R_26348075_SNP [dm3] 3R_30522353_SNP [dm6]	A	G	1.819e^-5	0.062	INTRON jdp
2R	14554974	2R_14554974_INS [dm3] 2R_18667469_INS [dm6]	C	CT	1.822e^-5	0.062	DOWNSTREAM edl INTERGENIC	TF binding site mE1_TFBS_HSA
2L	19239472	2L_19239472_SNP [dm3] 2L_19239472_SNP [dm6]	C	T	1.832e^-5	0.062	INTERGENIC
3R	11170309	3R_11170309_SNP [dm3] 3R_15344587_SNP [dm6]	T	G	1.834e^-5	0.062	SYNONYMOUS_CODING Surf4	TF binding site BDTNP1_TFBS_da mE1_TFBS_chinmo mE1_TFBS_sens
3R	11534069	3R_11534069_SNP [dm3] 3R_15708347_SNP [dm6]	T	A	1.837e^-5	0.062	UTR_3_PRIME CG5404
2R	7801059	2R_7801059_SNP [dm3] 2R_11913554_SNP [dm6]	T	A	1.843e^-5	0.062	UPSTREAM CG13183 INTERGENIC
3L	4722156	3L_4722156_SNP [dm3] 3L_4722156_SNP [dm6]	T	A	1.864e^-5	0.063	INTRON RhoGEF64C
2R	14961449	2R_14961449_SNP [dm3] 2R_19073944_SNP [dm6]	C	T	1.870e^-5	0.063	INTRON 5-HT1A
2R	14963929	2R_14963929_SNP [dm3] 2R_19076424_SNP [dm6]	T	C	1.870e^-5	0.063	INTRON 5-HT1A
X	17030508	X_17030508_SNP [dm3] X_17136475_SNP [dm6]	G	A	1.879e^-5	0.063	UTR_3_PRIME mei-218 DOWNSTREAM mei-218 & 2 others
2R	14554969	2R_14554969_DEL [dm3] 2R_18667464_DEL [dm6]	GC	G	1.890e^-5	0.063	DOWNSTREAM edl INTERGENIC	TF binding site mE1_TFBS_HSA
3R	19204251	3R_19204251_SNP [dm3] 3R_23378529_SNP [dm6]	G	A	1.892e^-5	0.063	SYNONYMOUS_CODING CG4393
2L	5363281	2L_5363281_SNP [dm3] 2L_5363281_SNP [dm6]	C	A	1.901e^-5	0.063	UTR_3_PRIME nompC INTRON nompC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
X	17219824	X_17219824_SNP [dm3] X_17325791_SNP [dm6]	C	G	1.904e^-5	0.063	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219829	X_17219829_MNP [dm3] X_17325796_MNP [dm6]	ATT	GGC	1.904e^-5	0.063	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219837	X_17219837_DEL [dm3] X_17325804_DEL [dm6]	CGGTGGTG	A	1.904e^-5	0.063	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219848	X_17219848_SNP [dm3] X_17325815_SNP [dm6]	T	G	1.904e^-5	0.063	INTERGENIC	TF binding site BDTNP1_TFBS_prd
3R	22127603	3R_22127603_SNP [dm3] 3R_26301881_SNP [dm6]	C	G	1.906e^-5	0.063	INTERGENIC
3R	11043257	3R_11043257_SNP [dm3] 3R_15217535_SNP [dm6]	G	C	1.916e^-5	0.063	NON_SYNONYMOUS_CODING SIDL	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	3789229	2R_3789229_SNP [dm3] 2R_7901724_SNP [dm6]	G	A	1.940e^-5	0.063	INTRON CG30377	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	26003927	3R_26003927_INS [dm3] 3R_30178205_INS [dm6]	G	GG	1.941e^-5	0.063	UPSTREAM CG1983 INTRON CG15530	TF binding site mE1_TFBS_chinmo
X	21007082	X_21007082_SNP [dm3] X_21136055_SNP [dm6]	A	G	1.942e^-5	0.063	SYNONYMOUS_CODING CG34120
3R	21224174	3R_21224174_SNP [dm3] 3R_25398452_SNP [dm6]	G	A	1.950e^-5	0.063	NON_SYNONYMOUS_CODING Muc96D INTRON Fur1
X	867232	X_867232_SNP [dm3] X_973199_SNP [dm6]	C	T	1.955e^-5	0.063	INTERGENIC	TF binding site mE1_TFBS_cad
3L	7922075	3L_7922075_DEL [dm3] 3L_7928975_DEL [dm6]	GCTG	G	1.956e^-5	0.063	CODON_DELETION syd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	7922102	3L_7922102_SNP [dm3] 3L_7929002_SNP [dm6]	G	A	1.956e^-5	0.063	SYNONYMOUS_CODING syd	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	15638440	3R_15638440_SNP [dm3] 3R_19812718_SNP [dm6]	C	A	1.957e^-5	0.063	INTRON bnl
3R	16099996	3R_16099996_SNP [dm3] 3R_20274274_SNP [dm6]	T	G	1.963e^-5	0.063	INTRON cic
2L	1728297	2L_1728297_SNP [dm3] 2L_1728297_SNP [dm6]	A	T	1.967e^-5	0.063	UPSTREAM Eno & 1 other INTRON Eno	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3L	20046068	3L_20046068_SNP [dm3] 3L_20052968_SNP [dm6]	A	C	1.969e^-5	0.063	INTERGENIC
4	739436	4_739436_INS [dm3] 4_718810_INS [dm6]	T	TTATAGGCCGATGCACTTGC...	1.971e^-5	0.063	INTRON ey	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	21493585	3R_21493585_SNP [dm3] 3R_25667863_SNP [dm6]	G	T	1.973e^-5	0.063	INTRON Lgr3
3L	15678686	3L_15678686_SNP [dm3] 3L_15685586_SNP [dm6]	A	T	1.976e^-5	0.063	DOWNSTREAM CG34452 INTRON pgant8	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
4	396192	4_396192_SNP [dm3] 4_375566_SNP [dm6]	A	G	1.976e^-5	0.063	DOWNSTREAM Lin29 & 1 other INTERGENIC
3L	13603858	3L_13603858_SNP [dm3] 3L_13610758_SNP [dm6]	G	T	1.979e^-5	0.063	INTRON bru-3
2L	7131579	2L_7131579_SNP [dm3] 2L_7131579_SNP [dm6]	T	A	1.983e^-5	0.064	INTRON Pvf3
2L	20088969	2L_20088969_SNP [dm3] 2L_20088969_SNP [dm6]	T	C	1.989e^-5	0.064	SYNONYMOUS_CODING neb DOWNSTREAM CG10747	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2R	18044693	2R_18044693_SNP [dm3] 2R_22157188_SNP [dm6]	A	T	2.001e^-5	0.064	INTRON a	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo
3R	25721479	3R_25721479_SNP [dm3] 3R_29895757_SNP [dm6]	G	A	2.007e^-5	0.064	INTRON CG31038	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17907323	2R_17907323_SNP [dm3] 2R_22019818_SNP [dm6]	G	T	2.023e^-5	0.064	INTRON CG34370
3R	26971301	3R_26971301_SNP [dm3] 3R_31145579_SNP [dm6]	T	A	2.026e^-5	0.064	INTRON Gycbeta100B
2R	17646555	2R_17646555_SNP [dm3] 2R_21759050_SNP [dm6]	G	C	2.033e^-5	0.064	INTERGENIC
3R	14849344	3R_14849344_SNP [dm3] 3R_19023622_SNP [dm6]	G	A	2.048e^-5	0.065	SYNONYMOUS_CODING CG6005 UPSTREAM CG14286	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	2258452	2L_2258452_SNP [dm3] 2L_2258452_SNP [dm6]	T	A	2.049e^-5	0.065	UPSTREAM CR44787 DOWNSTREAM CR44788 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	17764006	3R_17764006_SNP [dm3] 3R_21938284_SNP [dm6]	T	C	2.053e^-5	0.065	INTERGENIC
3R	26001958	3R_26001958_SNP [dm3] 3R_30176236_SNP [dm6]	T	G	2.069e^-5	0.065	UTR_3_PRIME CG1983
3R	26001970	3R_26001970_SNP [dm3] 3R_30176248_SNP [dm6]	G	C	2.069e^-5	0.065	UTR_3_PRIME CG1983
2L	20993023	2L_20993023_SNP [dm3] 2L_20993023_SNP [dm6]	C	T	2.073e^-5	0.065	INTRON CG42238
3R	24741224	3R_24741224_SNP [dm3] 3R_28915502_SNP [dm6]	A	G	2.074e^-5	0.065	INTRON Doa
2R	16149426	2R_16149426_SNP [dm3] 2R_20261921_SNP [dm6]	A	G	2.076e^-5	0.065	SYNONYMOUS_CODING PCNA DOWNSTREAM Hsl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	12795227	3L_12795227_SNP [dm3] 3L_12802127_SNP [dm6]	A	G	2.080e^-5	0.065	INTRON Atg1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	21885633	X_21885633_SNP [dm3] X_22483797_SNP [dm6]	C	T	2.085e^-5	0.065	SYNONYMOUS_CODING Cp110	TF binding site mE1_TFBS_cad mE1_TFBS_sens
3L	20172303	3L_20172303_SNP [dm3] 3L_20179203_SNP [dm6]	A	T	2.089e^-5	0.065	INTRON CG42674	TF binding site mE1_TFBS_inv
3L	20151293	3L_20151293_SNP [dm3] 3L_20158193_SNP [dm6]	G	T	2.110e^-5	0.066	INTRON CG42674
3R	22883293	3R_22883293_SNP [dm3] 3R_27057571_SNP [dm6]	T	C	2.122e^-5	0.066	DOWNSTREAM Nep5 & 1 other INTRON RYa-R
3R	22127745	3R_22127745_SNP [dm3] 3R_26302023_SNP [dm6]	T	A	2.124e^-5	0.066	INTERGENIC
X	3484767	X_3484767_SNP [dm3] X_3590734_SNP [dm6]	A	T	2.127e^-5	0.066	INTRON AstA-R1
X	18458374	X_18458374_SNP [dm3] X_18564341_SNP [dm6]	G	A	2.133e^-5	0.066	INTRON Bx	TF binding site mE1_TFBS_chinmo
3R	21640069	3R_21640069_SNP [dm3] 3R_25814347_SNP [dm6]	C	T	2.137e^-5	0.066	INTERGENIC
2L	4134965	2L_4134965_SNP [dm3] 2L_4134965_SNP [dm6]	T	A	2.138e^-5	0.066	INTERGENIC
3R	14243657	3R_14243657_SNP [dm3] 3R_18417935_SNP [dm6]	G	A	2.140e^-5	0.066	DOWNSTREAM fru INTRON fru	TF binding site BDTNP1_TFBS_dl
2R	17802751	2R_17802751_SNP [dm3] 2R_21915246_SNP [dm6]	A	G	2.144e^-5	0.066	INTRON Fili
3R	22760089	3R_22760089_SNP [dm3] 3R_26934367_SNP [dm6]	A	C	2.149e^-5	0.066	INTRON sda
2L	4652030	2L_4652030_SNP [dm3] 2L_4652030_SNP [dm6]	T	C	2.156e^-5	0.066	SYNONYMOUS_CODING CG3355	TF binding site mE1_TFBS_chinmo
X	16160178	X_16160178_SNP [dm3] X_16266145_SNP [dm6]	C	T	2.166e^-5	0.066	NON_SYNONYMOUS_CODING CG12507 DOWNSTREAM kat80
3L	17528223	3L_17528223_SNP [dm3] 3L_17535123_SNP [dm6]	T	G	2.179e^-5	0.066	INTRON Nedd4	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	8808893	3L_8808893_SNP [dm3] 3L_8815793_SNP [dm6]	C	T	2.196e^-5	0.067	INTERGENIC
2R	9161417	2R_9161417_SNP [dm3] 2R_13273912_SNP [dm6]	A	G	2.202e^-5	0.067	SYNONYMOUS_CODING Dh31-R	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	26501249	3R_26501249_SNP [dm3] 3R_30675527_SNP [dm6]	C	A	2.211e^-5	0.067	INTERGENIC
2R	5869867	2R_5869867_SNP [dm3] 2R_9982362_SNP [dm6]	G	A	2.213e^-5	0.067	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	8129943	X_8129943_SNP [dm3] X_8235910_SNP [dm6]	C	A	2.214e^-5	0.067	SYNONYMOUS_CODING sdt	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	11032075	X_11032075_SNP [dm3] X_11138042_SNP [dm6]	T	A	2.224e^-5	0.067	UTR_5_PRIME CG18292 UPSTREAM Klp10A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3L	10407718	3L_10407718_SNP [dm3] 3L_10414618_SNP [dm6]	A	T	2.237e^-5	0.067	UTR_3_PRIME CG12362
3L	4180964	3L_4180964_SNP [dm3] 3L_4180964_SNP [dm6]	A	G	2.240e^-5	0.067	SYNONYMOUS_CODING Teh2 INTRON CG18675	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	24411336	3R_24411336_SNP [dm3] 3R_28585614_SNP [dm6]	C	T	2.242e^-5	0.067	UPSTREAM MRE23 & 1 other INTERGENIC	regulatory region REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	14999558	2R_14999558_SNP [dm3] 2R_19112053_SNP [dm6]	T	A	2.252e^-5	0.067	INTRON 5-HT1A	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26368894	3R_26368894_SNP [dm3] 3R_30543172_SNP [dm6]	C	A	2.253e^-5	0.067	INTRON tmod	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	17219826	X_17219826_SNP [dm3] X_17325793_SNP [dm6]	A	T	2.256e^-5	0.067	INTERGENIC	TF binding site BDTNP1_TFBS_prd
2R	17246094	2R_17246094_SNP [dm3] 2R_21358589_SNP [dm6]	A	T	2.262e^-5	0.067	INTRON cv-2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	3497569	2L_3497569_SNP [dm3] 2L_3497569_SNP [dm6]	G	T	2.263e^-5	0.067	INTRON tim
2L	3497574	2L_3497574_SNP [dm3] 2L_3497574_SNP [dm6]	T	C	2.263e^-5	0.067	INTRON tim
3L	10573127	3L_10573127_SNP [dm3] 3L_10580027_SNP [dm6]	A	T	2.279e^-5	0.068	INTRON A2bp1
3R	19146740	3R_19146740_SNP [dm3] 3R_23321018_SNP [dm6]	A	T	2.287e^-5	0.068	INTRON pnt	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	21503219	3R_21503219_SNP [dm3] 3R_25677497_SNP [dm6]	A	G	2.297e^-5	0.068	UPSTREAM CR45225 DOWNSTREAM Lgr3 INTRON CG4730
2L	4651991	2L_4651991_SNP [dm3] 2L_4651991_SNP [dm6]	C	T	2.298e^-5	0.068	SYNONYMOUS_CODING CG3355	TF binding site mE1_TFBS_chinmo
2L	18767754	2L_18767754_SNP [dm3] 2L_18767754_SNP [dm6]	T	C	2.301e^-5	0.068	INTRON ham
2R	5979670	2R_5979670_SNP [dm3] 2R_10092165_SNP [dm6]	C	T	2.308e^-5	0.068	INTRON CG2269
2R	16742367	2R_16742367_SNP [dm3] 2R_20854862_SNP [dm6]	T	A	2.332e^-5	0.069	INTERGENIC
2L	18367210	2L_18367210_SNP [dm3] 2L_18367210_SNP [dm6]	G	T	2.337e^-5	0.069	INTRON Fas3
3R	19146259	3R_19146259_SNP [dm3] 3R_23320537_SNP [dm6]	C	T	2.340e^-5	0.069	INTRON pnt	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	7255493	3R_7255493_SNP [dm3] 3R_11429771_SNP [dm6]	G	C	2.347e^-5	0.069	UTR_3_PRIME CG5270 UPSTREAM CG18643 DOWNSTREAM RpL24-like
3L	17345829	3L_17345829_SNP [dm3] 3L_17352729_SNP [dm6]	G	T	2.369e^-5	0.069	UPSTREAM CG7692 INTRON CG7692	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1
3L	15699993	3L_15699993_SNP [dm3] 3L_15706893_SNP [dm6]	T	C	2.379e^-5	0.069	INTERGENIC
3R	24743376	3R_24743376_SNP [dm3] 3R_28917654_SNP [dm6]	C	T	2.383e^-5	0.069	NON_SYNONYMOUS_CODING Doa INTRON Doa	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	22799251	3R_22799251_SNP [dm3] 3R_26973529_SNP [dm6]	A	T	2.383e^-5	0.069	SYNONYMOUS_CODING CG5521	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	14762445	3L_14762445_SNP [dm3] 3L_14769345_SNP [dm6]	T	G	2.396e^-5	0.07	UTR_3_PRIME mop UPSTREAM CG17173
3R	15638466	3R_15638466_SNP [dm3] 3R_19812744_SNP [dm6]	A	C	2.401e^-5	0.07	INTRON bnl
2R	19902043	2R_19902043_SNP [dm3] 2R_24014520_SNP [dm6]	G	A	2.414e^-5	0.07	UPSTREAM Unc-89 DOWNSTREAM CG4324 INTERGENIC
2R	6658191	2R_6658191_INS [dm3] 2R_10770686_INS [dm6]	G	GAG	2.415e^-5	0.07	INTRON CG33144
3R	17182512	3R_17182512_SNP [dm3] 3R_21356790_SNP [dm6]	G	A	2.417e^-5	0.07	DOWNSTREAM mod_mdg4_ INTRON mod_mdg4_ & 6 others
2L	6989112	2L_6989112_SNP [dm3] 2L_6989112_SNP [dm6]	T	C	2.424e^-5	0.07	INTRON uif
3R	14498538	3R_14498538_SNP [dm3] 3R_18672816_SNP [dm6]	A	C	2.428e^-5	0.07	DOWNSTREAM CG31230 INTRON CG7702	TF binding site mE1_TFBS_cad
3L	15526684	3L_15526684_SNP [dm3] 3L_15533584_SNP [dm6]	T	A	2.439e^-5	0.07	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
3L	13014952	3L_13014952_SNP [dm3] 3L_13021852_SNP [dm6]	A	G	2.460e^-5	0.071	UPSTREAM AdenoK INTRON AdenoK	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	8808918	3L_8808918_INS [dm3] 3L_8815818_INS [dm6]	T	ATGCCAC	2.466e^-5	0.071	INTERGENIC
3R	22798996	3R_22798996_SNP [dm3] 3R_26973274_SNP [dm6]	C	T	2.475e^-5	0.071	SYNONYMOUS_CODING CG5521	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	20532206	2R_20532206_SNP [dm3] 2R_24644683_SNP [dm6]	A	C	2.475e^-5	0.071	INTERGENIC
3R	21207108	3R_21207108_SNP [dm3] 3R_25381386_SNP [dm6]	C	A	2.482e^-5	0.071	NON_SYNONYMOUS_CODING alrm INTRON Fur1
2R	14598019	2R_14598019_SNP [dm3] 2R_18710514_SNP [dm6]	T	C	2.493e^-5	0.071	SYNONYMOUS_CODING CG15087 UPSTREAM pncr016:2R	TF binding site BDTNP1_TFBS_dl
3L	10691509	3L_10691509_SNP [dm3] 3L_10698409_SNP [dm6]	T	C	2.504e^-5	0.071	INTERGENIC
3L	8331303	3L_8331303_SNP [dm3] 3L_8338203_SNP [dm6]	G	A	2.511e^-5	0.071	UTR_3_PRIME Cpr66Cb UPSTREAM Pex2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	19026870	2R_19026870_SNP [dm3] 2R_23139347_SNP [dm6]	C	T	2.529e^-5	0.071	NON_SYNONYMOUS_CODING CG13544 DOWNSTREAM CG30192
3L	9548258	3L_9548258_SNP [dm3] 3L_9555158_SNP [dm6]	A	G	2.534e^-5	0.071	INTRON CG42673
3R	15398162	3R_15398162_SNP [dm3] 3R_19572440_SNP [dm6]	G	T	2.536e^-5	0.071	INTRON Dys
2R	17786108	2R_17786108_SNP [dm3] 2R_21898603_SNP [dm6]	G	C	2.540e^-5	0.071	INTRON Fili
2R	3450096	2R_3450096_SNP [dm3] 2R_7562591_SNP [dm6]	C	T	2.543e^-5	0.071	UTR_3_PRIME Corin
X	16159677	X_16159677_SNP [dm3] X_16265644_SNP [dm6]	G	A	2.544e^-5	0.071	SYNONYMOUS_CODING CG12507
3R	11191649	3R_11191649_SNP [dm3] 3R_15365927_SNP [dm6]	C	A	2.547e^-5	0.071	INTRON CG34404
2R	18050764	2R_18050764_SNP [dm3] 2R_22163259_SNP [dm6]	T	A	2.573e^-5	0.072	NON_SYNONYMOUS_CODING a DOWNSTREAM CG34206	TF binding site mE1_TFBS_cad
3L	7255854	3L_7255854_SNP [dm3] 3L_7262754_SNP [dm6]	G	A	2.583e^-5	0.072	INTRON CG14830
3L	2268017	3L_2268017_SNP [dm3] 3L_2268017_SNP [dm6]	C	G	2.587e^-5	0.072	NON_SYNONYMOUS_CODING obst-I UPSTREAM CG32302 DOWNSTREAM CG13806
2R	9793080	2R_9793080_SNP [dm3] 2R_13905575_SNP [dm6]	C	T	2.587e^-5	0.072	INTRON shot
3R	14239148	3R_14239148_SNP [dm3] 3R_18413426_SNP [dm6]	T	A	2.588e^-5	0.072	UPSTREAM CG31122 DOWNSTREAM fru INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Ubx
3L	11651501	3L_11651501_SNP [dm3] 3L_11658401_SNP [dm6]	G	C	2.609e^-5	0.073	INTRON CG32085
3R	15637969	3R_15637969_SNP [dm3] 3R_19812247_SNP [dm6]	C	T	2.615e^-5	0.073	INTRON bnl
2L	5363332	2L_5363332_SNP [dm3] 2L_5363332_SNP [dm6]	T	C	2.620e^-5	0.073	UTR_3_PRIME nompC INTRON nompC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	22760154	3R_22760154_SNP [dm3] 3R_26934432_SNP [dm6]	G	T	2.629e^-5	0.073	INTRON sda
3R	26017253	3R_26017253_SNP [dm3] 3R_30191531_SNP [dm6]	A	C	2.636e^-5	0.073	UPSTREAM CG9747 INTERGENIC
3L	10572649	3L_10572649_SNP [dm3] 3L_10579549_SNP [dm6]	C	T	2.653e^-5	0.073	INTRON A2bp1	TF binding site BDTNP1_TFBS_twi
3R	17153040	3R_17153040_SNP [dm3] 3R_21327318_SNP [dm6]	G	A	2.653e^-5	0.073	INTRON CG16791	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	5151506	X_5151506_SNP [dm3] X_5257473_SNP [dm6]	G	A	2.653e^-5	0.073	INTERGENIC
X	5151538	X_5151538_SNP [dm3] X_5257505_SNP [dm6]	C	A	2.653e^-5	0.073	INTERGENIC
X	9809234	X_9809234_SNP [dm3] X_9915201_SNP [dm6]	C	T	2.653e^-5	0.073	INTERGENIC
X	9809493	X_9809493_SNP [dm3] X_9915460_SNP [dm6]	C	T	2.653e^-5	0.073	INTERGENIC	TF binding site BDTNP1_TFBS_hb
X	3329396	X_3329396_SNP [dm3] X_3435363_SNP [dm6]	A	G	2.654e^-5	0.073	SYNONYMOUS_CODING CG14269 INTRON CR44999 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3L	9918772	3L_9918772_SNP [dm3] 3L_9925672_SNP [dm6]	T	A	2.660e^-5	0.073	INTRON CG34356
3L	4447006	3L_4447006_SNP [dm3] 3L_4447006_SNP [dm6]	T	C	2.660e^-5	0.073	UPSTREAM CR45739 INTRON CG12607
3R	11702384	3R_11702384_SNP [dm3] 3R_15876662_SNP [dm6]	C	T	2.675e^-5	0.073	UPSTREAM CG31183 INTERGENIC
3R	4156995	3R_4156995_SNP [dm3] 3R_8331273_SNP [dm6]	G	C	2.682e^-5	0.073	INTRON Poxm	TF binding site mE1_TFBS_HSA
3R	20772586	3R_20772586_SNP [dm3] 3R_24946864_SNP [dm6]	G	A	2.684e^-5	0.073	UPSTREAM CG13646 DOWNSTREAM Nmnat INTRON Nmnat	TF binding site mE1_TFBS_chinmo
3L	11277648	3L_11277648_SNP [dm3] 3L_11284548_SNP [dm6]	C	T	2.699e^-5	0.073	UPSTREAM CR45404 INTERGENIC	TF binding site BDTNP1_TFBS_twi
X	8448920	X_8448920_SNP [dm3] X_8554887_SNP [dm6]	A	T	2.705e^-5	0.073	UTR_3_PRIME Nrg DOWNSTREAM IntS4	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_kn
3L	14110682	3L_14110682_SNP [dm3] 3L_14117582_SNP [dm6]	T	G	2.709e^-5	0.073	INTRON Sox21b
3L	14110683	3L_14110683_SNP [dm3] 3L_14117583_SNP [dm6]	A	C	2.709e^-5	0.073	INTRON Sox21b
3L	14110703	3L_14110703_SNP [dm3] 3L_14117603_SNP [dm6]	A	T	2.709e^-5	0.073	INTRON Sox21b
2L	1987824	2L_1987824_DEL [dm3] 2L_1987824_DEL [dm6]	GG	G	2.709e^-5	0.073	UPSTREAM Got2 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	16416331	2R_16416331_SNP [dm3] 2R_20528826_SNP [dm6]	C	A	2.716e^-5	0.073	SYNONYMOUS_CODING CG30151
3R	19546888	3R_19546888_SNP [dm3] 3R_23721166_SNP [dm6]	C	A	2.748e^-5	0.074	NON_SYNONYMOUS_CODING CG10232
3R	21637505	3R_21637505_INS [dm3] 3R_25811783_INS [dm6]	GA	TGCT	2.763e^-5	0.074	UPSTREAM CG17770 & 1 other DOWNSTREAM CG5024 INTERGENIC
3L	7704134	3L_7704134_SNP [dm3] 3L_7711034_SNP [dm6]	A	T	2.772e^-5	0.074	INTRON CG32373 & 1 other
3L	970880	3L_970880_SNP [dm3] 3L_970880_SNP [dm6]	G	A	2.776e^-5	0.074	INTRON Glut1
X	21264184	X_21264184_SNP [dm3] X_21393157_SNP [dm6]	A	T	2.782e^-5	0.074	INTERGENIC
3R	5996520	3R_5996520_SNP [dm3] 3R_10170798_SNP [dm6]	C	T	2.796e^-5	0.075	UPSTREAM Best1 DOWNSTREAM CG12814 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
3R	18898899	3R_18898899_SNP [dm3] 3R_23073177_SNP [dm6]	C	A	2.800e^-5	0.075	INTRON CG13830	TF binding site mE1_TFBS_chinmo
3R	1750359	3R_1750359_DEL [dm3] 3R_5924637_DEL [dm6]	TT	T	2.805e^-5	0.075	INTRON CG34113
3R	15821054	3R_15821054_SNP [dm3] 3R_19995332_SNP [dm6]	T	C	2.808e^-5	0.075	INTRON Hs6st	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	22760097	3R_22760097_SNP [dm3] 3R_26934375_SNP [dm6]	T	A	2.816e^-5	0.075	INTRON sda
3R	22758958	3R_22758958_INS [dm3] 3R_26933236_INS [dm6]	T	TGT	2.822e^-5	0.075	INTRON sda
2R	20532174	2R_20532174_SNP [dm3] 2R_24644651_SNP [dm6]	G	A	2.826e^-5	0.075	INTERGENIC
3L	20784765	3L_20784765_SNP [dm3] 3L_20791665_SNP [dm6]	C	A	2.836e^-5	0.075	INTRON Six4
3R	27043704	3R_27043704_SNP [dm3] 3R_31217982_SNP [dm6]	G	A	2.839e^-5	0.075	UPSTREAM RNaseP:RNA INTRON CG1746	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_gt mE1_TFBS_cad mE1_TFBS_HSA
3R	14978233	3R_14978233_SNP [dm3] 3R_19152511_SNP [dm6]	T	C	2.850e^-5	0.075	INTRON CG5835
2R	13097495	2R_13097495_SNP [dm3] 2R_17209990_SNP [dm6]	T	C	2.856e^-5	0.075	INTERGENIC
2R	13097518	2R_13097518_SNP [dm3] 2R_17210013_SNP [dm6]	G	A	2.856e^-5	0.075	INTERGENIC
2R	13097686	2R_13097686_SNP [dm3] 2R_17210181_SNP [dm6]	G	C	2.856e^-5	0.075	INTERGENIC
2R	18173244	2R_18173244_SNP [dm3] 2R_22285739_SNP [dm6]	A	T	2.856e^-5	0.075	UTR_3_PRIME dve	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	11170351	3R_11170351_SNP [dm3] 3R_15344629_SNP [dm6]	G	A	2.872e^-5	0.075	SYNONYMOUS_CODING Surf4	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_sens
3L	3522257	3L_3522257_SNP [dm3] 3L_3522257_SNP [dm6]	C	A	2.877e^-5	0.075	DOWNSTREAM CR45043 INTRON Eip63E
4	395585	4_395585_SNP [dm3] 4_374959_SNP [dm6]	A	T	2.883e^-5	0.075	UTR_3_PRIME Hcf DOWNSTREAM Lin29	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	17956444	2L_17956444_SNP [dm3] 2L_17956444_SNP [dm6]	T	A	2.898e^-5	0.075	INTERGENIC
2L	17956454	2L_17956454_SNP [dm3] 2L_17956454_SNP [dm6]	C	A	2.898e^-5	0.075	INTERGENIC
2L	17956464	2L_17956464_SNP [dm3] 2L_17956464_SNP [dm6]	G	C	2.898e^-5	0.075	INTERGENIC
2L	583780	2L_583780_SNP [dm3] 2L_583780_SNP [dm6]	T	A	2.911e^-5	0.075	UTR_3_PRIME Gsc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	4423692	X_4423692_SNP [dm3] X_4529659_SNP [dm6]	T	A	2.912e^-5	0.075	UPSTREAM CG3556 INTRON CR32773	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens
3R	13703805	3R_13703805_SNP [dm3] 3R_17878083_SNP [dm6]	G	A	2.915e^-5	0.075	INTRON Rim
3R	13703868	3R_13703868_INS [dm3] 3R_17878146_INS [dm6]	G	GTTCTC	2.915e^-5	0.075	INTRON Rim
2L	15478889	2L_15478889_SNP [dm3] 2L_15478889_SNP [dm6]	A	G	2.920e^-5	0.075	UPSTREAM sna INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	20131561	3R_20131561_SNP [dm3] 3R_24305839_SNP [dm6]	T	A	2.923e^-5	0.075	INTRON crb	TF binding site BDTNP1_TFBS_Med mE1_TFBS_cad
2R	5979659	2R_5979659_SNP [dm3] 2R_10092154_SNP [dm6]	G	A	2.929e^-5	0.075	INTRON CG2269
3R	10070204	3R_10070204_SNP [dm3] 3R_14244482_SNP [dm6]	G	A	2.970e^-5	0.076	NON_SYNONYMOUS_CODING CG43291 DOWNSTREAM CG9616
2L	8502980	2L_8502980_SNP [dm3] 2L_8502980_SNP [dm6]	G	A	2.979e^-5	0.076	INTRON Dh31
2L	8274056	2L_8274056_SNP [dm3] 2L_8274056_SNP [dm6]	G	A	2.981e^-5	0.076	UTR_5_PRIME Btk29A INTRON Btk29A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2R	8580324	2R_8580324_SNP [dm3] 2R_12692819_SNP [dm6]	T	C	2.983e^-5	0.076	UPSTREAM CG8768 INTERGENIC	TF binding site BDTNP1_TFBS_Med
X	14756702	X_14756702_SNP [dm3] X_14862669_SNP [dm6]	C	T	2.986e^-5	0.076	DOWNSTREAM CG9518 INTRON Flo2
2R	1625251	2R_1625251_SNP [dm3] 2R_5737746_SNP [dm6]	C	T	2.993e^-5	0.076	INTERGENIC	regulatory region REDfly_CRMs
3R	1862785	3R_1862785_SNP [dm3] 3R_6037063_SNP [dm6]	C	A	2.998e^-5	0.076	INTERGENIC
3L	4840407	3L_4840407_SNP [dm3] 3L_4840407_SNP [dm6]	G	A	3.007e^-5	0.076	UPSTREAM CG13707 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2R	15920764	2R_15920764_SNP [dm3] 2R_20033259_SNP [dm6]	A	T	3.012e^-5	0.076	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	24014933	3R_24014933_SNP [dm3] 3R_28189211_SNP [dm6]	A	T	3.014e^-5	0.076	INTRON CG34354
3R	27129280	3R_27129280_SNP [dm3] 3R_31303558_SNP [dm6]	A	G	3.021e^-5	0.076	SYNONYMOUS_CODING CG11340	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
X	10126777	X_10126777_SNP [dm3] X_10232744_SNP [dm6]	G	A	3.025e^-5	0.076	UTR_5_PRIME Ipod UPSTREAM Ipod DOWNSTREAM Hk INTRON Ipod
3R	15660494	3R_15660494_SNP [dm3] 3R_19834772_SNP [dm6]	C	G	3.029e^-5	0.076	INTRON bnl
3L	14110657	3L_14110657_SNP [dm3] 3L_14117557_SNP [dm6]	G	T	3.047e^-5	0.077	INTRON Sox21b
3R	14213363	3R_14213363_SNP [dm3] 3R_18387641_SNP [dm6]	G	C	3.050e^-5	0.077	SYNONYMOUS_CODING Vha100-4 DOWNSTREAM cona	TF binding site mE1_TFBS_cad
3R	13117513	3R_13117513_SNP [dm3] 3R_17291791_SNP [dm6]	T	A	3.070e^-5	0.077	INTERGENIC
3R	10641554	3R_10641554_SNP [dm3] 3R_14815832_SNP [dm6]	G	C	3.075e^-5	0.077	NON_SYNONYMOUS_CODING btsz INTRON btsz	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3R	14204895	3R_14204895_SNP [dm3] 3R_18379173_SNP [dm6]	T	C	3.077e^-5	0.077	INTRON CG7675
2L	20908964	2L_20908964_SNP [dm3] 2L_20908964_SNP [dm6]	T	G	3.078e^-5	0.077	INTRON sky & 1 other
4	297961	4_297961_SNP [dm3] 4_277335_SNP [dm6]	A	T	3.079e^-5	0.077	UPSTREAM NfI EXON CR44023	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
4	739338	4_739338_INS [dm3] 4_718712_INS [dm6]	A	AATTCATTTAACCTTGGGCT...	3.081e^-5	0.077	INTRON ey	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2R	7956213	2R_7956213_SNP [dm3] 2R_12068708_SNP [dm6]	G	A	3.084e^-5	0.077	INTRON CG8888
3L	5399555	3L_5399555_SNP [dm3] 3L_5406455_SNP [dm6]	C	T	3.089e^-5	0.077	INTERGENIC
3R	10595223	3R_10595223_SNP [dm3] 3R_14769501_SNP [dm6]	G	A	3.091e^-5	0.077	INTRON jvl
3L	9145738	3L_9145738_INS [dm3] 3L_9152638_INS [dm6]	G	GTTG	3.098e^-5	0.077	INTRON Rdl	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2R	17135347	2R_17135347_SNP [dm3] 2R_21247842_SNP [dm6]	A	T	3.120e^-5	0.077	INTRON ASPP	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	13236517	X_13236517_SNP [dm3] X_13342484_SNP [dm6]	C	T	3.122e^-5	0.077	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	7234157	3L_7234157_SNP [dm3] 3L_7241057_SNP [dm6]	T	C	3.131e^-5	0.077	UPSTREAM Neos DOWNSTREAM BHD INTRON RpL18	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	11399716	2L_11399716_SNP [dm3] 2L_11399716_SNP [dm6]	G	A	3.138e^-5	0.077	INTERGENIC	regulatory region REDfly_CRMs
3R	20095460	3R_20095460_SNP [dm3] 3R_24269738_SNP [dm6]	A	T	3.141e^-5	0.077	INTRON jar	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
2L	4441352	2L_4441352_SNP [dm3] 2L_4441352_SNP [dm6]	C	T	3.146e^-5	0.077	UPSTREAM CG15431 & 1 other DOWNSTREAM Sfp24F INTERGENIC	TF binding site mE1_TFBS_Trl
3R	11189455	3R_11189455_SNP [dm3] 3R_15363733_SNP [dm6]	G	A	3.152e^-5	0.077	SYNONYMOUS_CODING CG6171 DOWNSTREAM CG34404 & 1 other	TF binding site mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA
X	21890951	X_21890951_SNP [dm3] X_22489115_SNP [dm6]	T	C	3.153e^-5	0.077	INTRON l_1_G0196 EXON CR43493
3R	16005541	3R_16005541_SNP [dm3] 3R_20179819_SNP [dm6]	G	T	3.155e^-5	0.077	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	19505906	X_19505906_SNP [dm3] X_19611873_SNP [dm6]	A	G	3.170e^-5	0.078	SYNONYMOUS_CODING Tyler UTR_5_PRIME Shawn DOWNSTREAM CG14207	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
4	277101	4_277101_SNP [dm3] 4_256475_SNP [dm6]	G	A	3.171e^-5	0.078	NON_SYNONYMOUS_CODING RhoGAP102A
3R	27355129	3R_27355129_SNP [dm3] 3R_31529407_SNP [dm6]	A	G	3.173e^-5	0.078	INTERGENIC	TF binding site mE1_TFBS_sbb
3R	15406350	3R_15406350_SNP [dm3] 3R_19580628_SNP [dm6]	C	T	3.179e^-5	0.078	INTRON Dys
2R	7955921	2R_7955921_SNP [dm3] 2R_12068416_SNP [dm6]	A	T	3.179e^-5	0.078	INTRON CG8888
X	16661381	X_16661381_SNP [dm3] X_16767348_SNP [dm6]	A	T	3.191e^-5	0.078	INTRON if
3R	11189193	3R_11189193_SNP [dm3] 3R_15363471_SNP [dm6]	G	T	3.200e^-5	0.078	NON_SYNONYMOUS_CODING CG6171 DOWNSTREAM CG34404 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	17625177	2R_17625177_SNP [dm3] 2R_21737672_SNP [dm6]	G	A	3.203e^-5	0.078	INTERGENIC
3R	6738574	3R_6738574_SNP [dm3] 3R_10912852_SNP [dm6]	G	T	3.209e^-5	0.078	INTERGENIC
3L	20150894	3L_20150894_SNP [dm3] 3L_20157794_SNP [dm6]	A	G	3.223e^-5	0.078	INTRON CG42674
3L	2822188	3L_2822188_SNP [dm3] 3L_2822188_SNP [dm6]	C	A	3.228e^-5	0.078	INTRON CG43444
3L	4840404	3L_4840404_SNP [dm3] 3L_4840404_SNP [dm6]	A	T	3.237e^-5	0.078	UPSTREAM CG13707 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
2L	1988354	2L_1988354_SNP [dm3] 2L_1988354_SNP [dm6]	T	A	3.239e^-5	0.078	UTR_5_PRIME Npc2a UPSTREAM Got2	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	20308758	3R_20308758_SNP [dm3] 3R_24483036_SNP [dm6]	A	T	3.241e^-5	0.078	INTERGENIC
3R	20562743	3R_20562743_SNP [dm3] 3R_24737021_SNP [dm6]	C	A	3.246e^-5	0.078	INTRON tok
3L	3388667	3L_3388667_SNP [dm3] 3L_3388667_SNP [dm6]	G	C	3.249e^-5	0.078	INTERGENIC
2L	759615	2L_759615_SNP [dm3] 2L_759615_SNP [dm6]	C	A	3.256e^-5	0.078	INTRON GABA-B-R3
2R	14963371	2R_14963371_SNP [dm3] 2R_19075866_SNP [dm6]	A	T	3.262e^-5	0.078	INTRON 5-HT1A
3L	9722004	3L_9722004_SNP [dm3] 3L_9728904_SNP [dm6]	A	C	3.267e^-5	0.078	UTR_3_PRIME Naa60 DOWNSTREAM Naa60
2L	17649700	2L_17649700_SNP [dm3] 2L_17649700_SNP [dm6]	T	A	3.269e^-5	0.078	UTR_3_PRIME CadN DOWNSTREAM CadN
3L	20867239	3L_20867239_SNP [dm3] 3L_20874139_SNP [dm6]	A	C	3.272e^-5	0.078	INTRON CG32432
3R	12564764	3R_12564764_SNP [dm3] 3R_16739042_SNP [dm6]	T	C	3.296e^-5	0.079	INTERGENIC	TF binding site mE1_TFBS_cad
3R	18841812	3R_18841812_SNP [dm3] 3R_23016090_SNP [dm6]	A	G	3.301e^-5	0.079	DOWNSTREAM CG6688 INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3R	17747685	3R_17747685_DEL [dm3] 3R_21921963_DEL [dm6]	TCTAAACTATTATCT...	C	3.315e^-5	0.079	INTERGENIC
3R	22608802	3R_22608802_SNP [dm3] 3R_26783080_SNP [dm6]	T	G	3.320e^-5	0.079	DOWNSTREAM CG42789 INTERGENIC	TF binding site mE1_TFBS_Kr
2L	10387500	2L_10387500_SNP [dm3] 2L_10387500_SNP [dm6]	G	T	3.331e^-5	0.079	UTR_3_PRIME mRpS7 UPSTREAM da	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3R	24087944	3R_24087944_SNP [dm3] 3R_28262222_SNP [dm6]	T	C	3.336e^-5	0.079	DOWNSTREAM CG43125 INTERGENIC
3R	25729912	3R_25729912_SNP [dm3] 3R_29904190_SNP [dm6]	G	A	3.338e^-5	0.079	UPSTREAM CG15517 DOWNSTREAM CG31038 INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3R	15398163	3R_15398163_SNP [dm3] 3R_19572441_SNP [dm6]	G	T	3.349e^-5	0.079	INTRON Dys
2R	14527636	2R_14527636_SNP [dm3] 2R_18640131_SNP [dm6]	A	T	3.355e^-5	0.079	UPSTREAM CheA56a & 2 others DOWNSTREAM tRNA:CR30227 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl
X	14756814	X_14756814_SNP [dm3] X_14862781_SNP [dm6]	C	A	3.363e^-5	0.079	DOWNSTREAM CG9518 INTRON Flo2
X	9806668	X_9806668_SNP [dm3] X_9912635_SNP [dm6]	A	T	3.363e^-5	0.079	INTERGENIC
2L	9877420	2L_9877420_SNP [dm3] 2L_9877420_SNP [dm6]	G	A	3.390e^-5	0.08	UTR_5_PRIME nAChRalpha6 INTRON nAChRalpha6
3R	23649940	3R_23649940_SNP [dm3] 3R_27824218_SNP [dm6]	A	G	3.391e^-5	0.08	INTRON CG34353
3R	27354997	3R_27354997_SNP [dm3] 3R_31529275_SNP [dm6]	G	A	3.409e^-5	0.08	INTERGENIC	TF binding site mE1_TFBS_sbb
2L	15478996	2L_15478996_SNP [dm3] 2L_15478996_SNP [dm6]	G	C	3.412e^-5	0.08	UPSTREAM sna INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	26567288	3R_26567288_SNP [dm3] 3R_30741566_SNP [dm6]	C	T	3.417e^-5	0.08	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	6501708	2R_6501708_SNP [dm3] 2R_10614203_SNP [dm6]	C	T	3.422e^-5	0.08	INTRON psq	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	20093349	2L_20093349_SNP [dm3] 2L_20093349_SNP [dm6]	T	C	3.422e^-5	0.08	SYNONYMOUS_CODING Taf13 UPSTREAM nesd DOWNSTREAM CG10721	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_sens
2L	12902773	2L_12902773_SNP [dm3] 2L_12902773_SNP [dm6]	T	A	3.428e^-5	0.08	INTERGENIC
2L	5290904	2L_5290904_SNP [dm3] 2L_5290904_SNP [dm6]	C	G	3.453e^-5	0.08	INTRON vri
2R	18683964	2R_18683964_INS [dm3] 2R_22796459_INS [dm6]	G	GTGCAAATCC	3.471e^-5	0.081	INTRON CG42260	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	8715828	3L_8715828_SNP [dm3] 3L_8722728_SNP [dm6]	C	T	3.475e^-5	0.081	SYNONYMOUS_CODING CG6511	TF binding site mE1_TFBS_sens
3R	4117801	3R_4117801_SNP [dm3] 3R_8292079_SNP [dm6]	A	G	3.493e^-5	0.081	UPSTREAM CG31463 DOWNSTREAM CG31464 INTERGENIC	TF binding site mE1_TFBS_cad
3L	20059387	3L_20059387_SNP [dm3] 3L_20066287_SNP [dm6]	C	A	3.493e^-5	0.081	INTRON sNPF-R
3L	12478321	3L_12478321_SNP [dm3] 3L_12485221_SNP [dm6]	C	T	3.496e^-5	0.081	UPSTREAM CG33725 & 1 other INTRON CG33725	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	26878364	3R_26878364_SNP [dm3] 3R_31052642_SNP [dm6]	C	T	3.522e^-5	0.081	UTR_3_PRIME l_3_03670 DOWNSTREAM Aph-4	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2R	11282880	2R_11282880_SNP [dm3] 2R_15395375_SNP [dm6]	A	T	3.533e^-5	0.081	INTERGENIC
3R	13189629	3R_13189629_SNP [dm3] 3R_17363907_SNP [dm6]	C	A	3.540e^-5	0.081	INTRON beat-IIa
3L	15671929	3L_15671929_SNP [dm3] 3L_15678829_SNP [dm6]	C	T	3.550e^-5	0.081	UPSTREAM CG7304 INTERGENIC
3L	11665043	3L_11665043_SNP [dm3] 3L_11671943_SNP [dm6]	A	C	3.552e^-5	0.081	INTRON CG32085
3R	10526421	3R_10526421_SNP [dm3] 3R_14700699_SNP [dm6]	T	A	3.557e^-5	0.081	INTRON kibra	TF binding site mE1_TFBS_cad
3R	26552893	3R_26552893_SNP [dm3] 3R_30727171_SNP [dm6]	C	A	3.563e^-5	0.081	INTRON CG1340	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	18791579	X_18791579_SNP [dm3] X_18897546_SNP [dm6]	C	T	3.564e^-5	0.081	DOWNSTREAM CG7349 INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3L	8746297	3L_8746297_DEL [dm3] 3L_8753197_DEL [dm6]	TAG	T	3.565e^-5	0.081	UPSTREAM Fhos INTERGENIC
3L	8746345	3L_8746345_SNP [dm3] 3L_8753245_SNP [dm6]	T	A	3.565e^-5	0.081	UPSTREAM Fhos INTERGENIC
2R	3987416	2R_3987416_SNP [dm3] 2R_8099911_SNP [dm6]	G	A	3.569e^-5	0.081	SYNONYMOUS_CODING CG11210	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	21223624	3R_21223624_SNP [dm3] 3R_25397902_SNP [dm6]	A	G	3.572e^-5	0.081	UTR_3_PRIME Muc96D INTRON Fur1
2L	5363329	2L_5363329_SNP [dm3] 2L_5363329_SNP [dm6]	A	G	3.579e^-5	0.082	UTR_3_PRIME nompC INTRON nompC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
3L	13950600	3L_13950600_SNP [dm3] 3L_13957500_SNP [dm6]	T	C	3.614e^-5	0.082	INTRON CG32137	TF binding site mE1_TFBS_inv
3L	19156999	3L_19156999_SNP [dm3] 3L_19163899_SNP [dm6]	A	T	3.618e^-5	0.082	INTRON fz2	TF binding site mE1_TFBS_cad
X	7889110	X_7889110_SNP [dm3] X_7995077_SNP [dm6]	C	T	3.621e^-5	0.082	UPSTREAM Tbh INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	15036983	3R_15036983_SNP [dm3] 3R_19211261_SNP [dm6]	C	T	3.626e^-5	0.082	UPSTREAM cry INTERGENIC
2R	14597947	2R_14597947_SNP [dm3] 2R_18710442_SNP [dm6]	T	C	3.630e^-5	0.082	SYNONYMOUS_CODING CG15087 UPSTREAM pncr016:2R	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3R	25296031	3R_25296031_SNP [dm3] 3R_29470309_SNP [dm6]	A	T	3.633e^-5	0.082	INTRON Ptp99A
3R	5223698	3R_5223698_SNP [dm3] 3R_9397976_SNP [dm6]	A	G	3.644e^-5	0.082	UPSTREAM Or85f INTERGENIC
2R	17732918	2R_17732918_SNP [dm3] 2R_21845413_SNP [dm6]	C	T	3.660e^-5	0.082	INTERGENIC
3L	6570545	3L_6570545_SNP [dm3] 3L_6577445_SNP [dm6]	T	A	3.674e^-5	0.082	INTRON CG18769 & 1 other
3L	6570548	3L_6570548_SNP [dm3] 3L_6577448_SNP [dm6]	T	G	3.674e^-5	0.082	INTRON CG18769 & 1 other
3L	6570551	3L_6570551_SNP [dm3] 3L_6577451_SNP [dm6]	A	T	3.674e^-5	0.082	INTRON CG18769 & 1 other
3L	6570554	3L_6570554_SNP [dm3] 3L_6577454_SNP [dm6]	T	A	3.674e^-5	0.082	INTRON CG18769 & 1 other
3L	18355645	3L_18355645_SNP [dm3] 3L_18362545_SNP [dm6]	C	T	3.681e^-5	0.083	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	20344070	3R_20344070_SNP [dm3] 3R_24518348_SNP [dm6]	G	A	3.697e^-5	0.083	UTR_5_PRIME Pp1alpha-96A DOWNSTREAM CG13617	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	20981220	3L_20981220_SNP [dm3] 3L_20988120_SNP [dm6]	C	T	3.697e^-5	0.083	INTERGENIC	TF binding site BDTNP1_TFBS_da
3L	2887932	3L_2887932_SNP [dm3] 3L_2887932_SNP [dm6]	C	T	3.702e^-5	0.083	INTRON spz5
2R	18287987	2R_18287987_DEL [dm3] 2R_22400482_DEL [dm6]	CATAC	C	3.712e^-5	0.083	INTRON babos	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
3R	14018043	3R_14018043_SNP [dm3] 3R_18192321_SNP [dm6]	G	A	3.712e^-5	0.083	UPSTREAM CG14313 DOWNSTREAM Ssdp INTERGENIC	TF binding site mE1_TFBS_cad
X	6062880	X_6062880_INS [dm3] X_6168847_INS [dm6]	A	AA	3.714e^-5	0.083	INTRON Ca-alpha1T
3R	27355717	3R_27355717_SNP [dm3] 3R_31529995_SNP [dm6]	T	A	3.715e^-5	0.083	INTERGENIC
3R	25996180	3R_25996180_SNP [dm3] 3R_30170458_SNP [dm6]	G	A	3.742e^-5	0.083	SYNONYMOUS_CODING CG31028 DOWNSTREAM Mlc2
2L	19809311	2L_19809311_SNP [dm3] 2L_19809311_SNP [dm6]	T	A	3.747e^-5	0.083	INTRON sick	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	2328261	3L_2328261_SNP [dm3] 3L_2328261_SNP [dm6]	G	A	3.748e^-5	0.083	INTRON MsR1
X	12617895	X_12617895_SNP [dm3] X_12723862_SNP [dm6]	C	A	3.751e^-5	0.083	INTRON Smr & 1 other	TF binding site BDTNP1_TFBS_dl
3R	9975155	3R_9975155_SNP [dm3] 3R_14149433_SNP [dm6]	A	T	3.770e^-5	0.083	SYNONYMOUS_CODING CG14355
3R	13727821	3R_13727821_SNP [dm3] 3R_17902099_SNP [dm6]	T	A	3.783e^-5	0.083	INTRON Rim
3R	11189508	3R_11189508_SNP [dm3] 3R_15363786_SNP [dm6]	A	T	3.796e^-5	0.084	UTR_5_PRIME CG6171 UTR_3_PRIME CG34404 DOWNSTREAM Trax & 1 other	TF binding site mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA
2R	16743143	2R_16743143_SNP [dm3] 2R_20855638_SNP [dm6]	G	A	3.802e^-5	0.084	INTERGENIC
3L	7604915	3L_7604915_SNP [dm3] 3L_7611815_SNP [dm6]	T	A	3.828e^-5	0.084	INTRON CG33275
4	230635	4_230635_SNP [dm3] 4_210009_SNP [dm6]	A	G	3.833e^-5	0.084	UPSTREAM Crk INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
4	397537	4_397537_INS [dm3] 4_376911_INS [dm6]	T	TTTTAATGTAATGTAAT...	3.833e^-5	0.084	INTRON Lin29	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	20322047	3R_20322047_SNP [dm3] 3R_24496325_SNP [dm6]	T	G	3.837e^-5	0.084	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	20322060	3R_20322060_SNP [dm3] 3R_24496338_SNP [dm6]	C	T	3.837e^-5	0.084	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	17332488	3R_17332488_INS [dm3] 3R_21506766_INS [dm6]	T	TTTTATCAAAAT...	3.844e^-5	0.084	INTRON C15	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	5996686	3R_5996686_SNP [dm3] 3R_10170964_SNP [dm6]	G	A	3.847e^-5	0.084	UPSTREAM Best1 DOWNSTREAM CG12814 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_cad
3R	12506389	3R_12506389_SNP [dm3] 3R_16680667_SNP [dm6]	C	A	3.865e^-5	0.084	INTRON Ubx	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
3R	14812503	3R_14812503_SNP [dm3] 3R_18986781_SNP [dm6]	T	A	3.881e^-5	0.084	INTRON gukh	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	13415755	3R_13415755_DEL [dm3] 3R_17590033_DEL [dm6]	AC	A	3.896e^-5	0.084	INTERGENIC
2R	19654985	2R_19654985_SNP [dm3] 2R_23767462_SNP [dm6]	G	T	3.898e^-5	0.084	INTRON CG9850
3L	8637225	3L_8637225_SNP [dm3] 3L_8644125_SNP [dm6]	A	T	3.903e^-5	0.084	DOWNSTREAM Cpr66D & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	14609881	3L_14609881_SNP [dm3] 3L_14616781_SNP [dm6]	T	A	3.903e^-5	0.084	INTRON shd
X	7065837	X_7065837_SNP [dm3] X_7171804_SNP [dm6]	A	G	3.906e^-5	0.084	INTRON CG9650 & 1 other
3L	9756765	3L_9756765_SNP [dm3] 3L_9763665_SNP [dm6]	G	C	3.910e^-5	0.084	SPLICE_SITE_REGION CG8177 UTR_5_PRIME CG8177	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
X	3168635	X_3168635_SNP [dm3] X_3274602_SNP [dm6]	T	C	3.912e^-5	0.084	INTRON dnc
2R	7945290	2R_7945290_SNP [dm3] 2R_12057785_SNP [dm6]	A	C	3.916e^-5	0.084	INTRON Drep-3
3R	25722805	3R_25722805_SNP [dm3] 3R_29897083_SNP [dm6]	A	C	3.918e^-5	0.084	NON_SYNONYMOUS_CODING CG31038 INTRON CG31038	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	14484635	3R_14484635_INS [dm3] 3R_18658913_INS [dm6]	T	TCTT	3.934e^-5	0.085	UTR_5_PRIME CG31224 UPSTREAM CstF-64 INTRON CG31224	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
3L	7138854	3L_7138854_SNP [dm3] 3L_7145754_SNP [dm6]	A	G	3.949e^-5	0.085	SYNONYMOUS_CODING corn
3R	12496079	3R_12496079_SNP [dm3] 3R_16670357_SNP [dm6]	C	T	3.951e^-5	0.085	INTRON Ubx
3R	22127176	3R_22127176_SNP [dm3] 3R_26301454_SNP [dm6]	G	C	3.955e^-5	0.085	INTERGENIC
3L	8746251	3L_8746251_INS [dm3] 3L_8753151_INS [dm6]	T	TGATTATAAGCT...	3.955e^-5	0.085	UPSTREAM Fhos INTERGENIC
3L	21162359	3L_21162359_SNP [dm3] 3L_21169259_SNP [dm6]	C	T	3.961e^-5	0.085	INTRON Ac78C
3L	7603097	3L_7603097_SNP [dm3] 3L_7609997_SNP [dm6]	T	A	3.992e^-5	0.085	INTRON CG33275
2L	1949634	2L_1949634_DEL [dm3] 2L_1949634_DEL [dm6]	TCAG	T	3.999e^-5	0.085	DOWNSTREAM erm INTERGENIC
2L	1972749	2L_1972749_SNP [dm3] 2L_1972749_SNP [dm6]	G	A	4.025e^-5	0.086	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Trl
3R	22572109	3R_22572109_DEL [dm3] 3R_26746387_DEL [dm6]	GCGAAAACAAGGCAAAATG...	G	4.028e^-5	0.086	INTERGENIC
3R	21069526	3R_21069526_SNP [dm3] 3R_25243804_SNP [dm6]	C	T	4.037e^-5	0.086	NON_SYNONYMOUS_CODING bam DOWNSTREAM CG11854	TF binding site mE1_TFBS_sens
3R	10253604	3R_10253604_SNP [dm3] 3R_14427882_SNP [dm6]	A	G	4.040e^-5	0.086	INTRON cv-c	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	9548358	3L_9548358_SNP [dm3] 3L_9555258_SNP [dm6]	T	C	4.046e^-5	0.086	INTRON CG42673
3R	14215759	3R_14215759_SNP [dm3] 3R_18390037_SNP [dm6]	T	C	4.066e^-5	0.086	UPSTREAM Vha100-4 DOWNSTREAM Vha100-2 INTERGENIC	TF binding site mE1_TFBS_cad
3R	14215765	3R_14215765_SNP [dm3] 3R_18390043_SNP [dm6]	T	C	4.066e^-5	0.086	UPSTREAM Vha100-4 DOWNSTREAM Vha100-2 INTERGENIC	TF binding site mE1_TFBS_cad
3L	1302874	3L_1302874_SNP [dm3] 3L_1302874_SNP [dm6]	C	T	4.074e^-5	0.086	UPSTREAM CG9149 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3R	14240264	3R_14240264_SNP [dm3] 3R_18414542_SNP [dm6]	T	A	4.074e^-5	0.086	UTR_3_PRIME fru DOWNSTREAM fru
3R	22122959	3R_22122959_SNP [dm3] 3R_26297237_SNP [dm6]	G	A	4.101e^-5	0.087	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
2L	7131580	2L_7131580_SNP [dm3] 2L_7131580_SNP [dm6]	G	A	4.114e^-5	0.087	INTRON Pvf3
3R	11189647	3R_11189647_SNP [dm3] 3R_15363925_SNP [dm6]	T	A	4.117e^-5	0.087	UTR_3_PRIME CG34404 UPSTREAM CG6171 DOWNSTREAM CG34404	TF binding site mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA
2R	19493020	2R_19493020_DEL [dm3] 2R_23605497_DEL [dm6]	AAG	A	4.133e^-5	0.087	UPSTREAM CG17664 DOWNSTREAM CG17662 INTRON CG17664
3R	4787620	3R_4787620_SNP [dm3] 3R_8961898_SNP [dm6]	G	A	4.153e^-5	0.087	INTRON CG11966
3L	10804869	3L_10804869_SNP [dm3] 3L_10811769_SNP [dm6]	C	T	4.170e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	15404739	3R_15404739_SNP [dm3] 3R_19579017_SNP [dm6]	T	C	4.181e^-5	0.087	INTRON Dys
3L	4914123	3L_4914123_SNP [dm3] 3L_4914123_SNP [dm6]	T	G	4.190e^-5	0.087	INTRON Rh50	TF binding site BDTNP1_TFBS_sna mE1_TFBS_HSA
3L	972893	3L_972893_SNP [dm3] 3L_972893_SNP [dm6]	C	A	4.191e^-5	0.087	INTRON Glut1
2L	12443239	2L_12443239_SNP [dm3] 2L_12443239_SNP [dm6]	A	G	4.208e^-5	0.087	SYNONYMOUS_CODING Oatp33Ea
3R	22130808	3R_22130808_SNP [dm3] 3R_26305086_SNP [dm6]	T	A	4.209e^-5	0.087	INTERGENIC
3R	18228527	3R_18228527_SNP [dm3] 3R_22402805_SNP [dm6]	T	C	4.210e^-5	0.087	UTR_5_PRIME CG13856
2L	10494561	2L_10494561_SNP [dm3] 2L_10494561_SNP [dm6]	G	A	4.217e^-5	0.087	SYNONYMOUS_CODING Myo31DF
3L	6570560	3L_6570560_SNP [dm3] 3L_6577460_SNP [dm6]	A	T	4.222e^-5	0.087	INTRON CG18769 & 1 other
2L	4098682	2L_4098682_SNP [dm3] 2L_4098682_SNP [dm6]	C	T	4.228e^-5	0.087	SYNONYMOUS_CODING ed	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	1728467	2L_1728467_SNP [dm3] 2L_1728467_SNP [dm6]	A	C	4.247e^-5	0.087	UPSTREAM Eno & 1 other INTRON Eno	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2L	1728474	2L_1728474_SNP [dm3] 2L_1728474_SNP [dm6]	T	C	4.247e^-5	0.087	UPSTREAM Eno & 1 other INTRON Eno	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
X	17219798	X_17219798_SNP [dm3] X_17325765_SNP [dm6]	T	A	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219800	X_17219800_SNP [dm3] X_17325767_SNP [dm6]	A	G	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219803	X_17219803_SNP [dm3] X_17325770_SNP [dm6]	C	T	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219804	X_17219804_SNP [dm3] X_17325771_SNP [dm6]	C	T	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219806	X_17219806_SNP [dm3] X_17325773_SNP [dm6]	T	A	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219809	X_17219809_SNP [dm3] X_17325776_SNP [dm6]	G	T	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219810	X_17219810_SNP [dm3] X_17325777_SNP [dm6]	T	G	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
X	17219813	X_17219813_DEL [dm3] X_17325780_DEL [dm6]	TAATAATA	T	4.260e^-5	0.087	INTERGENIC	TF binding site BDTNP1_TFBS_prd
3R	22126066	3R_22126066_SNP [dm3] 3R_26300344_SNP [dm6]	A	T	4.264e^-5	0.087	INTERGENIC
2L	4651847	2L_4651847_SNP [dm3] 2L_4651847_SNP [dm6]	A	C	4.265e^-5	0.087	SYNONYMOUS_CODING CG3355	TF binding site mE1_TFBS_chinmo
3R	14955847	3R_14955847_SNP [dm3] 3R_19130125_SNP [dm6]	G	T	4.278e^-5	0.088	SYNONYMOUS_CODING CG6040	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	13138071	3R_13138071_INS [dm3] 3R_17312349_INS [dm6]	A	AA	4.278e^-5	0.088	INTERGENIC
X	19249034	X_19249034_SNP [dm3] X_19355001_SNP [dm6]	G	A	4.283e^-5	0.088	INTRON kek5	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	15071410	3R_15071410_SNP [dm3] 3R_19245688_SNP [dm6]	A	C	4.292e^-5	0.088	INTRON unc79
3R	22590087	3R_22590087_SNP [dm3] 3R_26764365_SNP [dm6]	C	A	4.294e^-5	0.088	INTERGENIC
2R	19844598	2R_19844598_SNP [dm3] 2R_23957075_SNP [dm6]	C	T	4.300e^-5	0.088	SYNONYMOUS_CODING CG16787 UPSTREAM alpha-catenin-related DOWNSTREAM thoc5	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	11032055	X_11032055_SNP [dm3] X_11138022_SNP [dm6]	T	C	4.340e^-5	0.088	UTR_5_PRIME CG18292 UPSTREAM Klp10A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Ubx
3L	2731437	3L_2731437_SNP [dm3] 3L_2731437_SNP [dm6]	T	C	4.341e^-5	0.088	INTRON Mrtf
3R	9325174	3R_9325174_SNP [dm3] 3R_13499452_SNP [dm6]	G	A	4.346e^-5	0.088	INTERGENIC
3R	26143090	3R_26143090_SNP [dm3] 3R_30317368_SNP [dm6]	T	C	4.362e^-5	0.088	INTRON hdc
3L	11277819	3L_11277819_SNP [dm3] 3L_11284719_SNP [dm6]	G	C	4.388e^-5	0.089	UPSTREAM CR45404 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
X	13548110	X_13548110_DEL [dm3] X_13654077_DEL [dm6]	TGGCTTT	AAGCCA	4.398e^-5	0.089	INTRON NFAT	TF binding site mE1_TFBS_HSA
3L	20166163	3L_20166163_SNP [dm3] 3L_20173063_SNP [dm6]	T	A	4.402e^-5	0.089	INTRON CG42674	TF binding site BDTNP1_TFBS_twi
2L	5291614	2L_5291614_SNP [dm3] 2L_5291614_SNP [dm6]	T	A	4.416e^-5	0.089	INTRON vri
3L	5787298	3L_5787298_SNP [dm3] 3L_5794198_SNP [dm6]	T	C	4.434e^-5	0.089	UPSTREAM Bre1 DOWNSTREAM Tektin-C INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA
3R	15589904	3R_15589904_INS [dm3] 3R_19764182_INS [dm6]	A	ATCCGT	4.434e^-5	0.089	INTRON GluClalpha
3R	26252432	3R_26252432_SNP [dm3] 3R_30426710_SNP [dm6]	A	G	4.447e^-5	0.089	SYNONYMOUS_CODING CG2218	TF binding site BDTNP1_TFBS_ftz BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	18020853	3R_18020853_SNP [dm3] 3R_22195131_SNP [dm6]	C	T	4.449e^-5	0.089	INTRON SKIP EXON CR45224	TF binding site mE1_TFBS_cad mE1_TFBS_cnc
2L	20089501	2L_20089501_SNP [dm3] 2L_20089501_SNP [dm6]	A	C	4.460e^-5	0.089	SYNONYMOUS_CODING neb DOWNSTREAM CG10747	TF binding site mE1_TFBS_cad
4	397461	4_397461_SNP [dm3] 4_376835_SNP [dm6]	G	A	4.463e^-5	0.089	INTRON Lin29	TF binding site BDTNP1_TFBS_da
3R	22573603	3R_22573603_SNP [dm3] 3R_26747881_SNP [dm6]	G	A	4.465e^-5	0.089	INTERGENIC
3R	24166692	3R_24166692_DEL [dm3] 3R_28340970_DEL [dm6]	TTCCAGCCAATTACATCT...	T	4.467e^-5	0.089	INTRON Moca-cyp	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_GATAe mE1_TFBS_HSA
3R	25930756	3R_25930756_SNP [dm3] 3R_30105034_SNP [dm6]	T	C	4.510e^-5	0.09	INTRON sima
3R	25930759	3R_25930759_SNP [dm3] 3R_30105037_SNP [dm6]	A	G	4.510e^-5	0.09	INTRON sima
3R	14204902	3R_14204902_SNP [dm3] 3R_18379180_SNP [dm6]	C	A	4.522e^-5	0.09	INTRON CG7675
3L	668790	3L_668790_SNP [dm3] 3L_668790_SNP [dm6]	G	T	4.526e^-5	0.09	INTERGENIC	TF binding site mE1_TFBS_chinmo
X	8448631	X_8448631_INS [dm3] X_8554598_INS [dm6]	T	TT	4.530e^-5	0.09	UTR_3_PRIME Nrg DOWNSTREAM IntS4	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_kn
2R	19216060	2R_19216060_SNP [dm3] 2R_23328537_SNP [dm6]	A	T	4.530e^-5	0.09	UPSTREAM CG30417 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	19216066	2R_19216066_INS [dm3] 2R_23328543_INS [dm6]	A	ACAATA	4.530e^-5	0.09	UPSTREAM CG30417 DOWNSTREAM CG30413 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	19216095	2R_19216095_SNP [dm3] 2R_23328572_SNP [dm6]	A	G	4.530e^-5	0.09	UPSTREAM CG30417 DOWNSTREAM CG30413 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	1760779	3R_1760779_SNP [dm3] 3R_5935057_SNP [dm6]	G	A	4.536e^-5	0.09	INTRON CG34113
3L	10363611	3L_10363611_SNP [dm3] 3L_10370511_SNP [dm6]	A	G	4.537e^-5	0.09	INTERGENIC
X	4242887	X_4242887_SNP [dm3] X_4348854_SNP [dm6]	T	C	4.564e^-5	0.09	INTRON norpA
X	6818072	X_6818072_SNP [dm3] X_6924039_SNP [dm6]	A	T	4.578e^-5	0.09	INTRON CG14431
3R	26408660	3R_26408660_SNP [dm3] 3R_30582938_SNP [dm6]	T	A	4.586e^-5	0.09	SYNONYMOUS_CODING Rpt6R DOWNSTREAM CG9702	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	5521108	X_5521108_SNP [dm3] X_5627075_SNP [dm6]	G	A	4.586e^-5	0.09	UTR_3_PRIME CG42492 DOWNSTREAM CG42492
3R	24088003	3R_24088003_SNP [dm3] 3R_28262281_SNP [dm6]	T	A	4.586e^-5	0.09	DOWNSTREAM CG43125 INTERGENIC
3L	18316692	3L_18316692_SNP [dm3] 3L_18323592_SNP [dm6]	A	T	4.589e^-5	0.09	INTERGENIC	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	6570546	3L_6570546_SNP [dm3] 3L_6577446_SNP [dm6]	C	G	4.592e^-5	0.09	INTRON CG18769 & 1 other
3R	22576911	3R_22576911_SNP [dm3] 3R_26751189_SNP [dm6]	T	C	4.604e^-5	0.09	INTERGENIC	TF binding site mE1_TFBS_chinmo
3R	11170094	3R_11170094_SNP [dm3] 3R_15344372_SNP [dm6]	A	T	4.611e^-5	0.09	INTRON Surf4	TF binding site mE1_TFBS_sens
3R	20322017	3R_20322017_SNP [dm3] 3R_24496295_SNP [dm6]	C	A	4.614e^-5	0.09	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	14637583	3L_14637583_SNP [dm3] 3L_14644483_SNP [dm6]	A	T	4.629e^-5	0.091	INTRON dlp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10041252	3R_10041252_SNP [dm3] 3R_14215530_SNP [dm6]	C	T	4.637e^-5	0.091	NON_SYNONYMOUS_CODING CG9649 UPSTREAM Dop1R1
3L	7574940	3L_7574940_SNP [dm3] 3L_7581840_SNP [dm6]	C	T	4.638e^-5	0.091	INTERGENIC
X	8275710	X_8275710_SNP [dm3] X_8381677_SNP [dm6]	C	G	4.677e^-5	0.091	INTERGENIC
2L	7131605	2L_7131605_MNP [dm3] 2L_7131605_MNP [dm6]	GCC	ATA	4.707e^-5	0.092	INTRON Pvf3
4	321140	4_321140_INS [dm3] 4_300514_INS [dm6]	T	TT	4.708e^-5	0.092	INTRON Syt7
3R	19073144	3R_19073144_SNP [dm3] 3R_23247422_SNP [dm6]	A	G	4.722e^-5	0.092	INTRON CG4467
3R	9950784	3R_9950784_SNP [dm3] 3R_14125062_SNP [dm6]	C	A	4.728e^-5	0.092	UPSTREAM RpII140 DOWNSTREAM twf INTRON 140up
3L	15693732	3L_15693732_SNP [dm3] 3L_15700632_SNP [dm6]	T	C	4.734e^-5	0.092	UPSTREAM comm2 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_Trl
2R	17112338	2R_17112338_SNP [dm3] 2R_21224833_SNP [dm6]	C	G	4.744e^-5	0.092	UPSTREAM ASPP INTRON ASPP
3R	26862392	3R_26862392_SNP [dm3] 3R_31036670_SNP [dm6]	A	G	4.745e^-5	0.092	DOWNSTREAM CG33773 INTERGENIC
3R	26016419	3R_26016419_SNP [dm3] 3R_30190697_SNP [dm6]	T	C	4.748e^-5	0.092	SYNONYMOUS_CODING CG9747	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
2L	1728443	2L_1728443_SNP [dm3] 2L_1728443_SNP [dm6]	C	T	4.751e^-5	0.092	UTR_5_PRIME Eno UPSTREAM Eno & 1 other INTRON Eno	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
2R	14470718	2R_14470718_SNP [dm3] 2R_18583213_SNP [dm6]	C	T	4.770e^-5	0.092	UTR_5_PRIME GEFmeso INTRON GEFmeso	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	13727873	3R_13727873_SNP [dm3] 3R_17902151_SNP [dm6]	T	G	4.779e^-5	0.092	INTRON Rim
3R	13727901	3R_13727901_SNP [dm3] 3R_17902179_SNP [dm6]	A	T	4.779e^-5	0.092	INTRON Rim
3R	15661210	3R_15661210_SNP [dm3] 3R_19835488_SNP [dm6]	C	A	4.781e^-5	0.092	INTRON bnl	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	15732049	2R_15732049_SNP [dm3] 2R_19844544_SNP [dm6]	C	T	4.783e^-5	0.092	UPSTREAM CG44569 INTERGENIC
3R	25095093	3R_25095093_SNP [dm3] 3R_29269371_SNP [dm6]	A	G	4.790e^-5	0.092	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	12506391	3R_12506391_SNP [dm3] 3R_16680669_SNP [dm6]	A	T	4.791e^-5	0.092	INTRON Ubx	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sbb
X	6136664	X_6136664_SNP [dm3] X_6242631_SNP [dm6]	C	G	4.795e^-5	0.092	SPLICE_SITE_REGION Rbcn-3A INTRON Rbcn-3A	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	3967713	3R_3967713_SNP [dm3] 3R_8141991_SNP [dm6]	T	A	4.802e^-5	0.092	UPSTREAM tRNA:R2:84Fa INTERGENIC
2R	20224992	2R_20224992_SNP [dm3] 2R_24337469_SNP [dm6]	C	A	4.812e^-5	0.092	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	22126244	3R_22126244_SNP [dm3] 3R_26300522_SNP [dm6]	T	A	4.833e^-5	0.092	INTERGENIC
2R	17066349	2R_17066349_SNP [dm3] 2R_21178844_SNP [dm6]	T	C	4.837e^-5	0.092	UPSTREAM Pu & 1 other INTRON Pu	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	18810234	3L_18810234_SNP [dm3] 3L_18817134_SNP [dm6]	A	C	4.844e^-5	0.092	INTRON CG14073
3L	20151559	3L_20151559_SNP [dm3] 3L_20158459_SNP [dm6]	T	C	4.851e^-5	0.092	INTRON CG42674
3R	26017500	3R_26017500_SNP [dm3] 3R_30191778_SNP [dm6]	C	T	4.859e^-5	0.092	UPSTREAM CG9747 INTERGENIC
3L	8316065	3L_8316065_SNP [dm3] 3L_8322965_SNP [dm6]	G	A	4.860e^-5	0.092	DOWNSTREAM CG13670 INTERGENIC
3R	16984538	3R_16984538_SNP [dm3] 3R_21158816_SNP [dm6]	C	G	4.863e^-5	0.092	DOWNSTREAM CG10824 INTRON SNF4Agamma
3R	16984544	3R_16984544_SNP [dm3] 3R_21158822_SNP [dm6]	T	A	4.863e^-5	0.092	DOWNSTREAM CG10824 INTRON SNF4Agamma
2L	587945	2L_587945_SNP [dm3] 2L_587945_SNP [dm6]	G	T	4.873e^-5	0.092	INTRON Gsc	TF binding site BDTNP1_TFBS_dl
2L	8186050	2L_8186050_SNP [dm3] 2L_8186050_SNP [dm6]	G	C	4.885e^-5	0.093	INTRON Piezo
3R	17785572	3R_17785572_SNP [dm3] 3R_21959850_SNP [dm6]	C	T	4.893e^-5	0.093	INTRON Eip93F	TF binding site mE1_TFBS_ftz_f1 mE1_TFBS_HSA
X	17028156	X_17028156_DEL [dm3] X_17134123_DEL [dm6]	GC	A	4.907e^-5	0.093	INTRON CG5004
X	18803704	X_18803704_INS [dm3] X_18909671_INS [dm6]	C	CTCGTATAC	4.917e^-5	0.093	UTR_3_PRIME CG7378 DOWNSTREAM CG7378	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	17066347	2R_17066347_SNP [dm3] 2R_21178842_SNP [dm6]	G	A	4.920e^-5	0.093	UPSTREAM Pu & 1 other INTRON Pu	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3L	18199310	3L_18199310_SNP [dm3] 3L_18206210_SNP [dm6]	C	T	4.933e^-5	0.093	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv
3R	14204884	3R_14204884_SNP [dm3] 3R_18379162_SNP [dm6]	A	G	4.938e^-5	0.093	INTRON CG7675
3L	18204468	3L_18204468_SNP [dm3] 3L_18211368_SNP [dm6]	A	G	4.942e^-5	0.093	INTERGENIC	TF binding site mE1_TFBS_cnc
3R	16371920	3R_16371920_SNP [dm3] 3R_20546198_SNP [dm6]	G	A	4.944e^-5	0.093	INTRON Stat92E	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	21223610	3R_21223610_SNP [dm3] 3R_25397888_SNP [dm6]	G	A	4.960e^-5	0.093	UTR_3_PRIME Muc96D INTRON Fur1
3L	13397105	3L_13397105_SNP [dm3] 3L_13404005_SNP [dm6]	T	G	4.961e^-5	0.093	INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	13130823	2L_13130823_SNP [dm3] 2L_13130823_SNP [dm6]	T	C	4.961e^-5	0.093	SPLICE_SITE_REGION CG5122 SYNONYMOUS_CODING CG5122
4	395724	4_395724_SNP [dm3] 4_375098_SNP [dm6]	C	T	4.968e^-5	0.093	UTR_3_PRIME Hcf DOWNSTREAM Lin29 & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	17730719	2R_17730719_SNP [dm3] 2R_21843214_SNP [dm6]	A	T	4.970e^-5	0.093	UPSTREAM tRNA:CR30407 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	16560329	3R_16560329_SNP [dm3] 3R_20734607_SNP [dm6]	T	C	4.988e^-5	0.093	UPSTREAM CR42786 INTERGENIC
X	19184745	X_19184745_SNP [dm3] X_19290712_SNP [dm6]	T	C	4.993e^-5	0.093	INTRON CG8034	TF binding site mE1_TFBS_HSA
3R	22123868	3R_22123868_SNP [dm3] 3R_26298146_SNP [dm6]	G	C	5.015e^-5	0.093	INTERGENIC	TF binding site mE1_TFBS_cad
2L	9565932	2L_9565932_SNP [dm3] 2L_9565932_SNP [dm6]	C	T	5.016e^-5	0.093	UPSTREAM jp INTRON jp	TF binding site mE1_TFBS_inv
3R	13095108	3R_13095108_SNP [dm3] 3R_17269386_SNP [dm6]	T	A	5.033e^-5	0.094	DOWNSTREAM CR44258 INTERGENIC

By genomic position
Variant impact
Gene name

Microbiota_OTU170 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results