DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=1.771e^-13)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_2L_t	0.05824

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
wolba	2.8968	0.0888

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

4850 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3R	6310552	3R_6310552_SNP [dm3] 3R_10484830_SNP [dm6]	T	A	3.235e^-10	6.019e^-4	INTERGENIC	TF binding site mE1_TFBS_cad
X	13546773	X_13546773_SNP [dm3] X_13652740_SNP [dm6]	T	A	6.139e^-9	0.004	INTRON NFAT	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	13546786	X_13546786_SNP [dm3] X_13652753_SNP [dm6]	A	C	6.139e^-9	0.004	INTRON NFAT	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
X	13546822	X_13546822_SNP [dm3] X_13652789_SNP [dm6]	A	T	8.060e^-9	0.004	INTRON NFAT	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_HSA
X	13546673	X_13546673_SNP [dm3] X_13652640_SNP [dm6]	A	G	9.968e^-9	0.004	INTRON NFAT	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	6269077	3R_6269077_DEL [dm3] 3R_10443355_DEL [dm6]	AA	A	4.886e^-8	0.01	INTERGENIC
X	15336941	X_15336941_SNP [dm3] X_15442908_SNP [dm6]	T	A	5.696e^-8	0.01	INTERGENIC
X	15337231	X_15337231_SNP [dm3] X_15443198_SNP [dm6]	C	T	5.696e^-8	0.01	INTERGENIC
3R	4806578	3R_4806578_SNP [dm3] 3R_8980856_SNP [dm6]	C	A	6.088e^-8	0.01	UPSTREAM CAHbeta INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	6269871	3R_6269871_SNP [dm3] 3R_10444149_SNP [dm6]	C	G	6.817e^-8	0.01	INTERGENIC
3R	4837047	3R_4837047_SNP [dm3] 3R_9011325_SNP [dm6]	A	T	6.859e^-8	0.01	INTRON CG11984	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	4815968	3R_4815968_SNP [dm3] 3R_8990246_SNP [dm6]	G	C	7.847e^-8	0.01	NON_SYNONYMOUS_CODING CG11970 DOWNSTREAM E_var_3-9
3R	4817823	3R_4817823_SNP [dm3] 3R_8992101_SNP [dm6]	G	A	7.847e^-8	0.01	NON_SYNONYMOUS_CODING E_var_3-9	TF binding site BDTNP1_TFBS_Med mE1_TFBS_sens
X	15335426	X_15335426_SNP [dm3] X_15441393_SNP [dm6]	G	A	8.395e^-8	0.01	UPSTREAM Cngl INTERGENIC	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	4801916	3R_4801916_SNP [dm3] 3R_8976194_SNP [dm6]	G	T	8.435e^-8	0.01	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_Kr
3R	4801289	3R_4801289_SNP [dm3] 3R_8975567_SNP [dm6]	C	T	8.512e^-8	0.01	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	4822806	3R_4822806_SNP [dm3] 3R_8997084_SNP [dm6]	C	T	9.777e^-8	0.01	UPSTREAM CG11977 INTRON CG31100
X	13546717	X_13546717_SNP [dm3] X_13652684_SNP [dm6]	A	G	9.954e^-8	0.01	INTRON NFAT	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	10852253	3R_10852253_SNP [dm3] 3R_15026531_SNP [dm6]	C	T	1.072e^-7	0.01	INTERGENIC
3R	4820467	3R_4820467_SNP [dm3] 3R_8994745_SNP [dm6]	T	A	1.096e^-7	0.01	UTR_3_PRIME CG11975 DOWNSTREAM CG31100
3R	4823780	3R_4823780_SNP [dm3] 3R_8998058_SNP [dm6]	G	A	1.096e^-7	0.01	NON_SYNONYMOUS_CODING CG11977 INTRON CG31100
3R	4802597	3R_4802597_SNP [dm3] 3R_8976875_SNP [dm6]	G	A	1.271e^-7	0.01	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	4806554	3R_4806554_SNP [dm3] 3R_8980832_SNP [dm6]	C	G	1.291e^-7	0.01	UPSTREAM CAHbeta INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	6310553	3R_6310553_DEL [dm3] 3R_10484831_DEL [dm6]	CACCCCATCATCC...	C	1.521e^-7	0.012	INTERGENIC	TF binding site mE1_TFBS_cad
3R	4826860	3R_4826860_SNP [dm3] 3R_9001138_SNP [dm6]	G	T	1.631e^-7	0.012	INTRON CG31100
3R	4826964	3R_4826964_SNP [dm3] 3R_9001242_SNP [dm6]	A	G	1.631e^-7	0.012	INTRON CG31100
2L	8847267	2L_8847267_SNP [dm3] 2L_8847267_SNP [dm6]	C	G	1.826e^-7	0.012	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_HSA
3R	10851092	3R_10851092_SNP [dm3] 3R_15025370_SNP [dm6]	C	A	1.912e^-7	0.012	INTERGENIC
3L	6807580	3L_6807580_SNP [dm3] 3L_6814480_SNP [dm6]	C	T	2.010e^-7	0.012	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_Trl
3R	10851234	3R_10851234_SNP [dm3] 3R_15025512_SNP [dm6]	G	C	2.052e^-7	0.012	INTERGENIC
3R	10851500	3R_10851500_SNP [dm3] 3R_15025778_SNP [dm6]	A	G	2.052e^-7	0.012	INTERGENIC
3R	10851117	3R_10851117_SNP [dm3] 3R_15025395_SNP [dm6]	A	G	2.052e^-7	0.012	INTERGENIC
3R	4823553	3R_4823553_SNP [dm3] 3R_8997831_SNP [dm6]	C	G	2.451e^-7	0.014	INTRON CG31100 & 1 other
2R	6506247	2R_6506247_DEL [dm3] 2R_10618742_DEL [dm6]	AA	A	2.960e^-7	0.016	INTRON CG11883	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	15732484	3L_15732484_SNP [dm3] 3L_15739384_SNP [dm6]	G	A	2.988e^-7	0.016	INTERGENIC
3L	16701502	3L_16701502_SNP [dm3] 3L_16708402_SNP [dm6]	C	A	3.107e^-7	0.016	INTRON Lasp & 1 other
3R	10014982	3R_10014982_SNP [dm3] 3R_14189260_SNP [dm6]	C	T	3.239e^-7	0.016	INTRON Dop1R1
3L	567556	3L_567556_SNP [dm3] 3L_567556_SNP [dm6]	G	A	3.255e^-7	0.016	INTRON hipk
3L	16818936	3L_16818936_SNP [dm3] 3L_16825836_SNP [dm6]	T	A	3.801e^-7	0.018	INTRON CG13024
3R	10859063	3R_10859063_SNP [dm3] 3R_15033341_SNP [dm6]	T	A	3.893e^-7	0.018	INTERGENIC
3R	8140244	3R_8140244_SNP [dm3] 3R_12314522_SNP [dm6]	T	C	3.931e^-7	0.018	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	6692399	3R_6692399_SNP [dm3] 3R_10866677_SNP [dm6]	G	A	4.363e^-7	0.019	SYNONYMOUS_CODING SelR	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	18482203	3R_18482203_SNP [dm3] 3R_22656481_SNP [dm6]	T	A	4.429e^-7	0.019	INTRON CG45058
3R	9988295	3R_9988295_SNP [dm3] 3R_14162573_SNP [dm6]	G	A	4.699e^-7	0.02	UPSTREAM CG3199 INTERGENIC
3R	4243979	3R_4243979_SNP [dm3] 3R_8418257_SNP [dm6]	T	G	4.780e^-7	0.02	INTRON CG45263
3L	12845668	3L_12845668_SNP [dm3] 3L_12852568_SNP [dm6]	A	G	5.047e^-7	0.02	DOWNSTREAM Wbp2 INTRON Wbp2
X	10957741	X_10957741_DEL [dm3] X_11063708_DEL [dm6]	TGCA	T	5.354e^-7	0.021	UPSTREAM CG1537 INTERGENIC
3R	5450555	3R_5450555_SNP [dm3] 3R_9624833_SNP [dm6]	G	A	5.575e^-7	0.021	UTR_3_PRIME CG8312 DOWNSTREAM CG9427	TF binding site BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3R	10850965	3R_10850965_SNP [dm3] 3R_15025243_SNP [dm6]	A	C	5.653e^-7	0.021	INTERGENIC
3R	6310539	3R_6310539_DEL [dm3] 3R_10484817_DEL [dm6]	GCTCACA	G	7.082e^-7	0.026	INTERGENIC	TF binding site mE1_TFBS_cad
3R	14652073	3R_14652073_DEL [dm3] 3R_18826351_DEL [dm6]	CG	C	8.562e^-7	0.031	INTRON CG18208
X	13576453	X_13576453_DEL [dm3] X_13682420_DEL [dm6]	AAAATCAGCTTA...	A	9.764e^-7	0.035	UPSTREAM CG11158 INTERGENIC
2L	11190066	2L_11190066_SNP [dm3] 2L_11190066_SNP [dm6]	G	A	9.885e^-7	0.035	INTRON Ca-beta	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	14780321	X_14780321_SNP [dm3] X_14886288_SNP [dm6]	C	T	1.156e^-6	0.04	UTR_3_PRIME CG9514 INTRON Flo2	TF binding site mE1_TFBS_chinmo
3L	6807742	3L_6807742_SNP [dm3] 3L_6814642_SNP [dm6]	G	T	1.175e^-6	0.04	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3R	10789177	3R_10789177_SNP [dm3] 3R_14963455_SNP [dm6]	G	A	1.203e^-6	0.04	INTERGENIC
3L	17311406	3L_17311406_SNP [dm3] 3L_17318306_SNP [dm6]	A	G	1.266e^-6	0.041	INTERGENIC
3R	6020356	3R_6020356_SNP [dm3] 3R_10194634_SNP [dm6]	A	T	1.467e^-6	0.044	INTRON Syn
X	15336058	X_15336058_SNP [dm3] X_15442025_SNP [dm6]	T	C	1.490e^-6	0.044	UPSTREAM Cngl INTERGENIC
X	15336059	X_15336059_SNP [dm3] X_15442026_SNP [dm6]	G	A	1.490e^-6	0.044	UPSTREAM Cngl INTERGENIC
3R	10865964	3R_10865964_INS [dm3] 3R_15040242_INS [dm6]	A	AA	1.546e^-6	0.044	DOWNSTREAM CR44944 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	9802372	2R_9802372_SNP [dm3] 2R_13914867_SNP [dm6]	A	T	1.615e^-6	0.044	INTRON shot
X	15337193	X_15337193_INS [dm3] X_15443160_INS [dm6]	T	TAAATGCTTTAAATAAATGC...	1.629e^-6	0.044	INTERGENIC
2L	20660246	2L_20660246_SNP [dm3] 2L_20660246_SNP [dm6]	G	T	1.631e^-6	0.044	SYNONYMOUS_CODING CG31678	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	4799846	3R_4799846_SNP [dm3] 3R_8974124_SNP [dm6]	C	G	1.652e^-6	0.044	INTERGENIC
3R	4802404	3R_4802404_SNP [dm3] 3R_8976682_SNP [dm6]	T	C	1.652e^-6	0.044	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	4804535	3R_4804535_SNP [dm3] 3R_8978813_SNP [dm6]	T	C	1.652e^-6	0.044	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	4806703	3R_4806703_SNP [dm3] 3R_8980981_SNP [dm6]	T	C	1.652e^-6	0.044	UTR_5_PRIME CAHbeta	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	6247377	3R_6247377_SNP [dm3] 3R_10421655_SNP [dm6]	G	A	1.693e^-6	0.044	INTERGENIC
2R	6524696	2R_6524696_SNP [dm3] 2R_10637191_SNP [dm6]	T	C	1.695e^-6	0.044	INTRON CG11883
3R	16904402	3R_16904402_SNP [dm3] 3R_21078680_SNP [dm6]	T	C	1.704e^-6	0.044	INTRON HHEX
2L	7955222	2L_7955222_SNP [dm3] 2L_7955222_SNP [dm6]	A	T	1.734e^-6	0.044	INTRON Snoo
3L	15863770	3L_15863770_SNP [dm3] 3L_15870670_SNP [dm6]	C	T	1.762e^-6	0.044	NON_SYNONYMOUS_CODING pHCl	TF binding site mE1_TFBS_cad
2L	13147743	2L_13147743_SNP [dm3] 2L_13147743_SNP [dm6]	T	C	1.782e^-6	0.044	DOWNSTREAM CR44199 INTERGENIC
3R	4888057	3R_4888057_SNP [dm3] 3R_9062335_SNP [dm6]	G	T	1.803e^-6	0.044	UTR_3_PRIME Kdm2 DOWNSTREAM beag	TF binding site mE1_TFBS_cad
X	15336929	X_15336929_SNP [dm3] X_15442896_SNP [dm6]	A	C	1.832e^-6	0.044	INTERGENIC
X	15336944	X_15336944_SNP [dm3] X_15442911_SNP [dm6]	C	T	1.832e^-6	0.044	INTERGENIC
2L	7485073	2L_7485073_SNP [dm3] 2L_7485073_SNP [dm6]	G	A	1.862e^-6	0.044	INTRON Ziz
3R	10609797	3R_10609797_SNP [dm3] 3R_14784075_SNP [dm6]	A	C	1.885e^-6	0.044	INTRON jvl
3R	10864690	3R_10864690_SNP [dm3] 3R_15038968_SNP [dm6]	T	C	1.915e^-6	0.044	DOWNSTREAM RpL10Aa EXON CR44944	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	5549884	2L_5549884_SNP [dm3] 2L_5549884_SNP [dm6]	G	A	1.931e^-6	0.044	SYNONYMOUS_CODING CG14014 DOWNSTREAM Oscillin	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi
3L	20065100	3L_20065100_SNP [dm3] 3L_20072000_SNP [dm6]	T	C	1.939e^-6	0.044	INTRON sNPF-R	TF binding site mE1_TFBS_chinmo
3R	14594357	3R_14594357_SNP [dm3] 3R_18768635_SNP [dm6]	A	T	1.984e^-6	0.044	INTRON CG7720
3R	12709396	3R_12709396_SNP [dm3] 3R_16883674_SNP [dm6]	T	A	2.002e^-6	0.044	INTRON iab-8	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt
3R	4824360	3R_4824360_SNP [dm3] 3R_8998638_SNP [dm6]	A	C	2.025e^-6	0.044	SYNONYMOUS_CODING CG11977 INTRON CG31100
X	15336946	X_15336946_INS [dm3] X_15442913_INS [dm6]	A	TC	2.088e^-6	0.044	INTERGENIC
X	15336960	X_15336960_SNP [dm3] X_15442927_SNP [dm6]	A	T	2.088e^-6	0.044	INTERGENIC
2L	19833109	2L_19833109_SNP [dm3] 2L_19833109_SNP [dm6]	G	T	2.122e^-6	0.044	INTRON sick
X	5903923	X_5903923_SNP [dm3] X_6009890_SNP [dm6]	T	A	2.164e^-6	0.044	INTRON mab-21
2L	10958104	2L_10958104_SNP [dm3] 2L_10958104_SNP [dm6]	A	T	2.185e^-6	0.044	INTRON dpr2	TF binding site BDTNP1_TFBS_twi
3R	4807098	3R_4807098_SNP [dm3] 3R_8981376_SNP [dm6]	C	A	2.255e^-6	0.044	INTRON CAHbeta	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
X	15336936	X_15336936_SNP [dm3] X_15442903_SNP [dm6]	A	T	2.276e^-6	0.044	INTERGENIC
3R	4847172	3R_4847172_SNP [dm3] 3R_9021450_SNP [dm6]	C	T	2.287e^-6	0.044	UTR_3_PRIME neur UPSTREAM CR31429	TF binding site BDTNP1_TFBS_twi
3R	4848076	3R_4848076_SNP [dm3] 3R_9022354_SNP [dm6]	G	T	2.287e^-6	0.044	NON_SYNONYMOUS_CODING neur EXON CR31429	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	4851259	3R_4851259_SNP [dm3] 3R_9025537_SNP [dm6]	A	C	2.287e^-6	0.044	INTRON neur	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3R	14577770	3R_14577770_SNP [dm3] 3R_18752048_SNP [dm6]	C	G	2.346e^-6	0.044	SYNONYMOUS_CODING CG14299
X	12362318	X_12362318_SNP [dm3] X_12468285_SNP [dm6]	C	T	2.353e^-6	0.044	INTRON CG42258	TF binding site mE1_TFBS_HSA
3R	4810104	3R_4810104_SNP [dm3] 3R_8984382_SNP [dm6]	A	T	2.356e^-6	0.044	UPSTREAM CG11970 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
4	911848	4_911848_SNP [dm3] 4_891222_SNP [dm6]	T	G	2.364e^-6	0.044	SYNONYMOUS_CODING unc-13 INTRON unc-13
3L	7046082	3L_7046082_SNP [dm3] 3L_7052982_SNP [dm6]	T	G	2.436e^-6	0.045	UTR_3_PRIME Mp DOWNSTREAM Mp
3R	12709186	3R_12709186_SNP [dm3] 3R_16883464_SNP [dm6]	A	T	2.537e^-6	0.046	INTRON iab-8	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_gt BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	5310018	2L_5310018_SNP [dm3] 2L_5310018_SNP [dm6]	G	A	2.559e^-6	0.046	UTR_3_PRIME vri
3R	4872012	3R_4872012_SNP [dm3] 3R_9046290_SNP [dm6]	A	T	2.563e^-6	0.046	INTRON Nmdmc & 1 other
3R	4872056	3R_4872056_SNP [dm3] 3R_9046334_SNP [dm6]	C	T	2.563e^-6	0.046	INTRON Nmdmc & 1 other
3R	4828618	3R_4828618_SNP [dm3] 3R_9002896_SNP [dm6]	G	C	2.597e^-6	0.046	INTRON CG31100
3R	4785755	3R_4785755_SNP [dm3] 3R_8960033_SNP [dm6]	A	G	2.616e^-6	0.046	INTRON CG11966
3R	4241479	3R_4241479_SNP [dm3] 3R_8415757_SNP [dm6]	C	T	2.737e^-6	0.048	INTRON CG45263
2R	4431679	2R_4431679_SNP [dm3] 2R_8544174_SNP [dm6]	A	G	2.799e^-6	0.048	UPSTREAM CR44279 INTERGENIC
3R	5471007	3R_5471007_SNP [dm3] 3R_9645285_SNP [dm6]	G	A	2.934e^-6	0.05	SYNONYMOUS_CODING Fst INTRON Dh44
3R	5470769	3R_5470769_SNP [dm3] 3R_9645047_SNP [dm6]	T	C	2.955e^-6	0.05	UTR_3_PRIME Fst INTRON Dh44	TF binding site BDTNP1_TFBS_twi
3R	4847417	3R_4847417_SNP [dm3] 3R_9021695_SNP [dm6]	T	C	3.084e^-6	0.052	UTR_3_PRIME neur UPSTREAM CR31429	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	4826694	3R_4826694_SNP [dm3] 3R_9000972_SNP [dm6]	G	C	3.185e^-6	0.052	INTRON CG31100
2L	10964557	2L_10964557_SNP [dm3] 2L_10964557_SNP [dm6]	G	T	3.216e^-6	0.052	UPSTREAM dpr2 DOWNSTREAM CG33129 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_ttk
3R	4823138	3R_4823138_DEL [dm3] 3R_8997416_DEL [dm6]	ACAATTGACATAAACAAACT...	A	3.270e^-6	0.052	UPSTREAM CG11977 INTRON CG31100
3R	4806856	3R_4806856_SNP [dm3] 3R_8981134_SNP [dm6]	T	A	3.271e^-6	0.052	INTRON CAHbeta	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3L	9045558	3L_9045558_SNP [dm3] 3L_9052458_SNP [dm6]	A	T	3.311e^-6	0.052	UPSTREAM Argk INTRON Argk	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	8800669	2L_8800669_SNP [dm3] 2L_8800669_SNP [dm6]	G	T	3.329e^-6	0.052	INTERGENIC
X	15339130	X_15339130_SNP [dm3] X_15445097_SNP [dm6]	T	C	3.331e^-6	0.052	INTERGENIC
2L	9225749	2L_9225749_SNP [dm3] 2L_9225749_SNP [dm6]	G	T	3.351e^-6	0.052	INTRON tai	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	4579333	3R_4579333_SNP [dm3] 3R_8753611_SNP [dm6]	T	C	3.472e^-6	0.054	NON_SYNONYMOUS_CODING CG8223 UTR_5_PRIME CG34135 UTR_3_PRIME CG11768 UPSTREAM CG34135 & 1 other DOWNSTREAM CG11768	TF binding site mE1_TFBS_cad
3R	4849601	3R_4849601_SNP [dm3] 3R_9023879_SNP [dm6]	G	C	3.500e^-6	0.054	INTRON neur EXON CR31429	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
2R	6524689	2R_6524689_SNP [dm3] 2R_10637184_SNP [dm6]	T	C	3.541e^-6	0.054	INTRON CG11883
3R	4392310	3R_4392310_SNP [dm3] 3R_8566588_SNP [dm6]	G	T	3.557e^-6	0.054	NON_SYNONYMOUS_CODING Cenp-C
3L	15673300	3L_15673300_SNP [dm3] 3L_15680200_SNP [dm6]	T	G	3.593e^-6	0.054	NON_SYNONYMOUS_CODING CG7304	TF binding site mE1_TFBS_HSA
4	1119870	4_1119870_SNP [dm3] 4_1099244_SNP [dm6]	C	T	3.599e^-6	0.054	INTRON sv	TF binding site BDTNP1_TFBS_dl
3L	16699817	3L_16699817_SNP [dm3] 3L_16706717_SNP [dm6]	C	T	3.691e^-6	0.054	DOWNSTREAM CG9692 INTRON Lasp & 1 other
3L	15855586	3L_15855586_SNP [dm3] 3L_15862486_SNP [dm6]	A	G	3.698e^-6	0.054	DOWNSTREAM pHCl INTRON pHCl
2L	14977154	2L_14977154_SNP [dm3] 2L_14977154_SNP [dm6]	A	T	3.814e^-6	0.055	INTRON mol
3R	8934699	3R_8934699_SNP [dm3] 3R_13108977_SNP [dm6]	T	A	3.874e^-6	0.055	INTRON timeout
3R	4649802	3R_4649802_INS [dm3] 3R_8824080_INS [dm6]	T	TGCTTATTTCAATT...	3.903e^-6	0.055	UTR_5_PRIME CG9836 UPSTREAM CG8379	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	4955554	3R_4955554_SNP [dm3] 3R_9129832_SNP [dm6]	G	A	3.914e^-6	0.055	INTRON pum
3R	4789098	3R_4789098_SNP [dm3] 3R_8963376_SNP [dm6]	C	T	3.937e^-6	0.055	UPSTREAM CG11966 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3L	187347	3L_187347_SNP [dm3] 3L_187347_SNP [dm6]	T	A	3.978e^-6	0.056	UTR_3_PRIME rno DOWNSTREAM rno
2L	12415601	2L_12415601_SNP [dm3] 2L_12415601_SNP [dm6]	C	A	3.999e^-6	0.056	INTRON vir-1
3R	5465852	3R_5465852_SNP [dm3] 3R_9640130_SNP [dm6]	G	A	4.161e^-6	0.057	UPSTREAM Dh44 INTRON Dh44
3R	10851305	3R_10851305_SNP [dm3] 3R_15025583_SNP [dm6]	C	G	4.240e^-6	0.057	INTERGENIC
3R	5452256	3R_5452256_SNP [dm3] 3R_9626534_SNP [dm6]	G	A	4.267e^-6	0.057	UPSTREAM CG8319 & 1 other INTRON CG9427	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5453094	3R_5453094_SNP [dm3] 3R_9627372_SNP [dm6]	A	G	4.267e^-6	0.057	UTR_5_PRIME CG8319 UPSTREAM CG9427	TF binding site BDTNP1_TFBS_z mE1_TFBS_ttk mE1_TFBS_Ubx
3R	8242073	3R_8242073_SNP [dm3] 3R_12416351_SNP [dm6]	C	A	4.275e^-6	0.057	SYNONYMOUS_CODING pps	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
4	1237281	4_1237281_SNP [dm3] 4_1233555_SNP [dm6]	C	A	4.384e^-6	0.058	INTRON Caps	TF binding site BDTNP1_TFBS_dl
X	18846849	X_18846849_SNP [dm3] X_18952816_SNP [dm6]	G	T	4.432e^-6	0.058	INTRON CG43759
3R	4812192	3R_4812192_DEL [dm3] 3R_8986470_DEL [dm6]	GA	T	4.436e^-6	0.058	INTRON CG11970	TF binding site mE1_TFBS_inv
3R	10029524	3R_10029524_SNP [dm3] 3R_14203802_SNP [dm6]	G	A	4.453e^-6	0.058	INTRON Dop1R1
3R	10019402	3R_10019402_SNP [dm3] 3R_14193680_SNP [dm6]	A	G	4.494e^-6	0.058	INTRON Dop1R1
3R	4257601	3R_4257601_SNP [dm3] 3R_8431879_SNP [dm6]	C	T	4.519e^-6	0.058	INTRON CG45263
3R	4257602	3R_4257602_SNP [dm3] 3R_8431880_SNP [dm6]	G	T	4.519e^-6	0.058	INTRON CG45263
3L	16701144	3L_16701144_SNP [dm3] 3L_16708044_SNP [dm6]	A	G	4.561e^-6	0.058	INTRON Lasp & 1 other
3R	4790659	3R_4790659_SNP [dm3] 3R_8964937_SNP [dm6]	T	C	4.639e^-6	0.058	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA
3R	4791261	3R_4791261_SNP [dm3] 3R_8965539_SNP [dm6]	A	G	4.639e^-6	0.058	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10071528	3R_10071528_SNP [dm3] 3R_14245806_SNP [dm6]	A	C	4.661e^-6	0.058	UPSTREAM CG9616 INTERGENIC
3R	6568117	3R_6568117_SNP [dm3] 3R_10742395_SNP [dm6]	A	G	4.689e^-6	0.058	INTRON TkR86C	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	10830170	X_10830170_SNP [dm3] X_10936137_SNP [dm6]	C	T	4.728e^-6	0.058	INTRON Myo10A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	4810929	3R_4810929_SNP [dm3] 3R_8985207_SNP [dm6]	C	A	4.776e^-6	0.058	SYNONYMOUS_CODING CG11970 UPSTREAM RagA-B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	13821563	3L_13821563_SNP [dm3] 3L_13828463_SNP [dm6]	C	T	4.863e^-6	0.059	INTERGENIC
3R	8232154	3R_8232154_SNP [dm3] 3R_12406432_SNP [dm6]	A	C	5.001e^-6	0.06	UPSTREAM CG5167 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_jumu
3L	20078602	3L_20078602_SNP [dm3] 3L_20085502_SNP [dm6]	G	A	5.027e^-6	0.06	INTRON sNPF-R
3L	18539285	3L_18539285_SNP [dm3] 3L_18546185_SNP [dm6]	C	A	5.146e^-6	0.061	INTERGENIC
3R	4821560	3R_4821560_SNP [dm3] 3R_8995838_SNP [dm6]	A	T	5.203e^-6	0.061	NON_SYNONYMOUS_CODING CG31100 DOWNSTREAM CG11975
3L	13824613	3L_13824613_SNP [dm3] 3L_13831513_SNP [dm6]	C	T	5.395e^-6	0.063	INTERGENIC
3L	15733120	3L_15733120_SNP [dm3] 3L_15740020_SNP [dm6]	C	G	5.472e^-6	0.063	INTERGENIC
2L	4832264	2L_4832264_SNP [dm3] 2L_4832264_SNP [dm6]	A	G	5.477e^-6	0.063	SYNONYMOUS_CODING Ir25a	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	5472884	3R_5472884_SNP [dm3] 3R_9647162_SNP [dm6]	T	C	5.527e^-6	0.063	INTRON Dh44
3R	8397004	3R_8397004_SNP [dm3] 3R_12571282_SNP [dm6]	C	T	5.636e^-6	0.064	INTRON Octbeta2R
2R	17259083	2R_17259083_SNP [dm3] 2R_21371578_SNP [dm6]	C	G	5.669e^-6	0.064	INTRON cv-2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	1574961	2L_1574961_SNP [dm3] 2L_1574961_SNP [dm6]	T	C	5.703e^-6	0.064	INTRON haf
X	10830185	X_10830185_SNP [dm3] X_10936152_SNP [dm6]	G	A	5.762e^-6	0.064	INTRON Myo10A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	4759569	3R_4759569_SNP [dm3] 3R_8933847_SNP [dm6]	A	G	5.789e^-6	0.064	DOWNSTREAM CR44020 INTERGENIC
3R	5472937	3R_5472937_SNP [dm3] 3R_9647215_SNP [dm6]	G	A	5.792e^-6	0.064	INTRON Dh44
3R	10151223	3R_10151223_DEL [dm3] 3R_14325501_DEL [dm6]	ACTTTCCTCC	A	5.923e^-6	0.065		TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_sens
3L	18533174	3L_18533174_SNP [dm3] 3L_18540074_SNP [dm6]	T	C	5.954e^-6	0.065	INTERGENIC	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	10862443	3R_10862443_SNP [dm3] 3R_15036721_SNP [dm6]	T	G	6.040e^-6	0.066	UPSTREAM RpL10Aa INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10789104	3R_10789104_SNP [dm3] 3R_14963382_SNP [dm6]	A	G	6.202e^-6	0.067	INTERGENIC
3R	9399062	3R_9399062_SNP [dm3] 3R_13573340_SNP [dm6]	T	G	6.383e^-6	0.068	INTERGENIC
3L	20550655	3L_20550655_SNP [dm3] 3L_20557555_SNP [dm6]	G	A	6.391e^-6	0.068	INTERGENIC
X	3219679	X_3219679_SNP [dm3] X_3325646_SNP [dm6]	G	A	6.428e^-6	0.068	INTRON CR44886 & 1 other
3L	18543961	3L_18543961_SNP [dm3] 3L_18550861_SNP [dm6]	C	T	6.531e^-6	0.069	INTERGENIC
3R	4885793	3R_4885793_SNP [dm3] 3R_9060071_SNP [dm6]	C	T	6.667e^-6	0.07	SYNONYMOUS_CODING Kdm2	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	7510021	2R_7510021_SNP [dm3] 2R_11622516_SNP [dm6]	A	G	6.785e^-6	0.071	INTRON CG9005	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2L	10200111	2L_10200111_SNP [dm3] 2L_10200111_SNP [dm6]	A	G	6.853e^-6	0.071	SYNONYMOUS_CODING Ripalpha UPSTREAM Sur & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_sens
X	10957685	X_10957685_SNP [dm3] X_11063652_SNP [dm6]	G	A	6.855e^-6	0.071	UPSTREAM CG1537 INTERGENIC
2L	11302175	2L_11302175_SNP [dm3] 2L_11302175_SNP [dm6]	T	C	6.928e^-6	0.071	INTERGENIC
3R	8917153	3R_8917153_SNP [dm3] 3R_13091431_SNP [dm6]	C	T	6.935e^-6	0.071	INTRON timeout
3L	15733104	3L_15733104_SNP [dm3] 3L_15740004_SNP [dm6]	G	T	6.982e^-6	0.071	INTERGENIC
3L	15672847	3L_15672847_SNP [dm3] 3L_15679747_SNP [dm6]	T	A	6.984e^-6	0.071	NON_SYNONYMOUS_CODING CG7304
2R	12964617	2R_12964617_SNP [dm3] 2R_17077112_SNP [dm6]	C	T	7.037e^-6	0.071	UPSTREAM CG30460 INTRON CG30460
3R	10383348	3R_10383348_SNP [dm3] 3R_14557626_SNP [dm6]	A	T	7.083e^-6	0.071	UTR_5_PRIME Pde6	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	16808686	3L_16808686_SNP [dm3] 3L_16815586_SNP [dm6]	C	T	7.104e^-6	0.071	INTRON nudC & 1 other
3R	5464454	3R_5464454_SNP [dm3] 3R_9638732_SNP [dm6]	C	T	7.208e^-6	0.071	INTRON Dh44
3R	4249875	3R_4249875_SNP [dm3] 3R_8424153_SNP [dm6]	G	C	7.242e^-6	0.071	INTRON CG45263
3L	15672674	3L_15672674_SNP [dm3] 3L_15679574_SNP [dm6]	G	T	7.491e^-6	0.073	UPSTREAM CG7304 INTERGENIC
3L	14502086	3L_14502086_SNP [dm3] 3L_14508986_SNP [dm6]	G	C	7.505e^-6	0.073	SYNONYMOUS_CODING bbg	TF binding site mE1_TFBS_sens
X	19220579	X_19220579_SNP [dm3] X_19326546_SNP [dm6]	G	T	7.597e^-6	0.074	DOWNSTREAM nAChRalpha7 INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_inv transposable element FlyBase
4	1266618	4_1266618_SNP [dm3] 4_1262892_SNP [dm6]	G	A	7.652e^-6	0.074	INTRON Caps
X	19220455	X_19220455_SNP [dm3] X_19326422_SNP [dm6]	C	T	7.724e^-6	0.074	DOWNSTREAM nAChRalpha7 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_inv
3R	5962922	3R_5962922_SNP [dm3] 3R_10137200_SNP [dm6]	A	G	7.860e^-6	0.074	INTRON tws
2R	12042114	2R_12042114_SNP [dm3] 2R_16154609_SNP [dm6]	T	A	7.879e^-6	0.074	INTRON lbk	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_zfh1
X	12517237	X_12517237_SNP [dm3] X_12623204_SNP [dm6]	C	T	7.884e^-6	0.074	DOWNSTREAM CR44568 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	4832285	2L_4832285_SNP [dm3] 2L_4832285_SNP [dm6]	T	G	7.934e^-6	0.075	SYNONYMOUS_CODING Ir25a	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
X	10957751	X_10957751_SNP [dm3] X_11063718_SNP [dm6]	C	G	8.035e^-6	0.075	UPSTREAM CG1537 INTERGENIC
2R	11696133	2R_11696133_SNP [dm3] 2R_15808628_SNP [dm6]	G	A	8.148e^-6	0.076	INTRON tun & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	4676531	3R_4676531_SNP [dm3] 3R_8850809_SNP [dm6]	T	G	8.344e^-6	0.077	INTRON pyd	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10862467	3R_10862467_SNP [dm3] 3R_15036745_SNP [dm6]	C	T	8.440e^-6	0.077	UPSTREAM RpL10Aa INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	15733118	3L_15733118_SNP [dm3] 3L_15740018_SNP [dm6]	A	T	8.453e^-6	0.077	INTERGENIC
2R	11446548	2R_11446548_INS [dm3] 2R_15559043_INS [dm6]	T	TTTAATCTTAATTTAAT...	8.531e^-6	0.078	UPSTREAM CG12963 INTRON CG12963	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	15336562	X_15336562_SNP [dm3] X_15442529_SNP [dm6]	T	C	8.787e^-6	0.08	INTERGENIC
2L	7473380	2L_7473380_SNP [dm3] 2L_7473380_SNP [dm6]	A	T	8.909e^-6	0.08	UTR_3_PRIME Ziz DOWNSTREAM CG6055 INTRON Ziz	TF binding site mE1_TFBS_inv
X	19538778	X_19538778_SNP [dm3] X_19644745_SNP [dm6]	G	A	9.108e^-6	0.081	SYNONYMOUS_CODING Arp10 DOWNSTREAM Sec61gamma	TF binding site mE1_TFBS_chinmo
X	15882920	X_15882920_SNP [dm3] X_15988887_SNP [dm6]	G	A	9.115e^-6	0.081	UTR_5_PRIME eIF5
2R	13298227	2R_13298227_SNP [dm3] 2R_17410722_SNP [dm6]	C	G	9.120e^-6	0.081	UPSTREAM CG30101 INTERGENIC
4	794348	4_794348_SNP [dm3] 4_773722_SNP [dm6]	T	C	9.216e^-6	0.082	INTRON bt	transposable element FlyBase
3L	19399884	3L_19399884_SNP [dm3] 3L_19406784_SNP [dm6]	C	T	9.299e^-6	0.082	DOWNSTREAM CR43966 INTRON CG32206
3L	19400575	3L_19400575_SNP [dm3] 3L_19407475_SNP [dm6]	C	T	9.299e^-6	0.082	INTRON CG32206
2L	13768734	2L_13768734_DEL [dm3] 2L_13768734_DEL [dm6]	TGTAT	T	9.349e^-6	0.082	INTRON TM9SF4
3L	1084275	3L_1084275_SNP [dm3] 3L_1084275_SNP [dm6]	C	T	9.434e^-6	0.082	INTRON bab1	TF binding site BDTNP1_TFBS_dl
3R	10789481	3R_10789481_SNP [dm3] 3R_14963759_SNP [dm6]	G	A	9.578e^-6	0.083	INTERGENIC
2L	11369834	2L_11369834_SNP [dm3] 2L_11369834_SNP [dm6]	G	C	9.704e^-6	0.083	NON_SYNONYMOUS_CODING salr
3L	22703464	3L_22703464_SNP [dm3] 3L_22710364_SNP [dm6]	C	G	9.735e^-6	0.083	INTERGENIC
3L	2333787	3L_2333787_SNP [dm3] 3L_2333787_SNP [dm6]	G	T	9.854e^-6	0.084	INTRON MsR1
3L	13859387	3L_13859387_SNP [dm3] 3L_13866287_SNP [dm6]	C	T	9.919e^-6	0.084	INTRON CG8745	TF binding site BDTNP1_TFBS_dl
3L	13380337	3L_13380337_SNP [dm3] 3L_13387237_SNP [dm6]	T	G	9.938e^-6	0.084	SYNONYMOUS_CODING CG10171	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	11067108	2R_11067108_SNP [dm3] 2R_15179603_SNP [dm6]	A	C	9.991e^-6	0.084	INTRON igl
3R	4867877	3R_4867877_SNP [dm3] 3R_9042155_SNP [dm6]	G	T	1.021e^-5	0.086	UTR_3_PRIME hyx DOWNSTREAM Nmdmc
X	10957965	X_10957965_SNP [dm3] X_11063932_SNP [dm6]	T	C	1.053e^-5	0.087	UPSTREAM CG1537 INTERGENIC
3R	6298008	3R_6298008_SNP [dm3] 3R_10472286_SNP [dm6]	C	T	1.054e^-5	0.087	INTERGENIC
3L	19405301	3L_19405301_SNP [dm3] 3L_19412201_SNP [dm6]	G	T	1.056e^-5	0.087	INTRON CG32206
3L	125913	3L_125913_DEL [dm3] 3L_125913_DEL [dm6]	AAAC	A	1.057e^-5	0.087	UPSTREAM CR45401 DOWNSTREAM CR45402 INTERGENIC
3R	8891758	3R_8891758_SNP [dm3] 3R_13066036_SNP [dm6]	C	G	1.063e^-5	0.087	INTRON sim	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2L	7643704	2L_7643704_SNP [dm3] 2L_7643704_SNP [dm6]	A	G	1.075e^-5	0.087	SYNONYMOUS_CODING Slob UTR_3_PRIME Slob
3R	14336306	3R_14336306_SNP [dm3] 3R_18510584_SNP [dm6]	C	A	1.080e^-5	0.087	INTRON fru
3R	14336307	3R_14336307_SNP [dm3] 3R_18510585_SNP [dm6]	C	A	1.080e^-5	0.087	INTRON fru
X	12517230	X_12517230_SNP [dm3] X_12623197_SNP [dm6]	G	A	1.093e^-5	0.088	DOWNSTREAM CR44568 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	18024346	X_18024346_DEL [dm3] X_18130313_DEL [dm6]	AG	A	1.104e^-5	0.088	UPSTREAM CG43133 DOWNSTREAM ari-1 INTERGENIC
3R	4244453	3R_4244453_SNP [dm3] 3R_8418731_SNP [dm6]	G	A	1.119e^-5	0.088	INTRON CG45263
3R	4244456	3R_4244456_DEL [dm3] 3R_8418734_DEL [dm6]	AGACAACTATCATTTGCTTT...	A	1.119e^-5	0.088	INTRON CG45263
3L	12845667	3L_12845667_SNP [dm3] 3L_12852567_SNP [dm6]	G	A	1.122e^-5	0.088	DOWNSTREAM Wbp2 INTRON Wbp2
3R	10860846	3R_10860846_SNP [dm3] 3R_15035124_SNP [dm6]	T	A	1.123e^-5	0.088	INTERGENIC
2R	2517858	2R_2517858_SNP [dm3] 2R_6630353_SNP [dm6]	G	T	1.132e^-5	0.088	INTRON Vha16-1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	4861232	3R_4861232_SNP [dm3] 3R_9035510_SNP [dm6]	T	A	1.137e^-5	0.088	INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	4854479	3R_4854479_SNP [dm3] 3R_9028757_SNP [dm6]	C	A	1.138e^-5	0.088	INTRON neur	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	4854506	3R_4854506_SNP [dm3] 3R_9028784_SNP [dm6]	C	T	1.138e^-5	0.088	INTRON neur	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	6499775	3R_6499775_SNP [dm3] 3R_10674053_SNP [dm6]	T	A	1.142e^-5	0.088	INTERGENIC	TF binding site mE1_TFBS_sens
X	10848770	X_10848770_SNP [dm3] X_10954737_SNP [dm6]	A	G	1.152e^-5	0.088	UTR_5_PRIME Myo10A INTRON Myo10A
3L	15883415	3L_15883415_SNP [dm3] 3L_15890315_SNP [dm6]	T	C	1.155e^-5	0.088	INTRON pHCl
3R	4787619	3R_4787619_SNP [dm3] 3R_8961897_SNP [dm6]	G	C	1.169e^-5	0.088	INTRON CG11966
3R	4273457	3R_4273457_SNP [dm3] 3R_8447735_SNP [dm6]	G	T	1.172e^-5	0.088	INTRON CG45263
3L	16198708	3L_16198708_SNP [dm3] 3L_16205608_SNP [dm6]	T	C	1.173e^-5	0.088	INTERGENIC
3R	5838910	3R_5838910_SNP [dm3] 3R_10013188_SNP [dm6]	A	G	1.178e^-5	0.088	SYNONYMOUS_CODING Mical INTRON Mical
3R	5444121	3R_5444121_SNP [dm3] 3R_9618399_SNP [dm6]	A	G	1.181e^-5	0.088	INTRON CG8312
3R	4638550	3R_4638550_SNP [dm3] 3R_8812828_SNP [dm6]	T	C	1.182e^-5	0.088	DOWNSTREAM CG9821 INTRON CG9837	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens
3R	4785072	3R_4785072_SNP [dm3] 3R_8959350_SNP [dm6]	C	A	1.190e^-5	0.088	INTRON CG11966	TF binding site mE1_TFBS_cad
2L	19833264	2L_19833264_SNP [dm3] 2L_19833264_SNP [dm6]	A	G	1.191e^-5	0.088	INTRON sick
3R	4248989	3R_4248989_SNP [dm3] 3R_8423267_SNP [dm6]	C	G	1.197e^-5	0.088	INTRON CG45263	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	18024344	X_18024344_SNP [dm3] X_18130311_SNP [dm6]	A	T	1.209e^-5	0.089	UPSTREAM CG43133 DOWNSTREAM ari-1 INTERGENIC
2L	7646948	2L_7646948_SNP [dm3] 2L_7646948_SNP [dm6]	T	C	1.210e^-5	0.089	UTR_3_PRIME Slob DOWNSTREAM Slob INTRON Slob
X	18024351	X_18024351_INS [dm3] X_18130318_INS [dm6]	T	TAACTGTGTGCGATTTACGA...	1.224e^-5	0.089	UPSTREAM CG43133 DOWNSTREAM ari-1 INTERGENIC
3R	8872862	3R_8872862_SNP [dm3] 3R_13047140_SNP [dm6]	A	C	1.227e^-5	0.089	NON_SYNONYMOUS_CODING Hsc70-2 UPSTREAM CG31157	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	10006015	3R_10006015_SNP [dm3] 3R_14180293_SNP [dm6]	A	G	1.229e^-5	0.089	SYNONYMOUS_CODING Dop1R1	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	10280103	3R_10280103_DEL [dm3] 3R_14454381_DEL [dm6]	TTTGTATTCATAAAT...	T	1.234e^-5	0.089	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	13715331	2L_13715331_SNP [dm3] 2L_13715331_SNP [dm6]	A	G	1.252e^-5	0.09	INTRON CG31814
2L	7641661	2L_7641661_SNP [dm3] 2L_7641661_SNP [dm6]	T	C	1.254e^-5	0.09	DOWNSTREAM Slob INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_zfh1
2R	19513530	2R_19513530_SNP [dm3] 2R_23626007_SNP [dm6]	G	C	1.270e^-5	0.091	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	2785610	2R_2785610_SNP [dm3] 2R_6898105_SNP [dm6]	T	C	1.285e^-5	0.091	INTRON CG30158	TF binding site mE1_TFBS_chinmo
3L	898329	3L_898329_SNP [dm3] 3L_898329_SNP [dm6]	C	G	1.287e^-5	0.091	SYNONYMOUS_CODING CG34057 DOWNSTREAM CG34056	TF binding site mE1_TFBS_sens
3R	4241863	3R_4241863_SNP [dm3] 3R_8416141_SNP [dm6]	T	A	1.292e^-5	0.091	INTRON CG45263
3R	4256513	3R_4256513_SNP [dm3] 3R_8430791_SNP [dm6]	A	T	1.299e^-5	0.091	INTRON CG45263
3R	9487595	3R_9487595_SNP [dm3] 3R_13661873_SNP [dm6]	A	T	1.314e^-5	0.092	INTRON B52	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D
3R	8140144	3R_8140144_SNP [dm3] 3R_12314422_SNP [dm6]	C	T	1.319e^-5	0.092	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	7643734	2L_7643734_SNP [dm3] 2L_7643734_SNP [dm6]	G	A	1.328e^-5	0.092	SYNONYMOUS_CODING Slob UTR_3_PRIME Slob
2L	9447140	2L_9447140_SNP [dm3] 2L_9447140_SNP [dm6]	A	G	1.352e^-5	0.093	INTRON numb	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_Trl
2L	1371173	2L_1371173_SNP [dm3] 2L_1371173_SNP [dm6]	C	T	1.385e^-5	0.095	INTERGENIC	TF binding site BDTNP1_TFBS_Med
3R	11351010	3R_11351010_SNP [dm3] 3R_15525288_SNP [dm6]	C	T	1.392e^-5	0.095	INTERGENIC
3R	11351017	3R_11351017_SNP [dm3] 3R_15525295_SNP [dm6]	C	T	1.392e^-5	0.095	INTERGENIC
3R	4954562	3R_4954562_SNP [dm3] 3R_9128840_SNP [dm6]	A	T	1.398e^-5	0.095	INTRON pum	TF binding site mE1_TFBS_Trl
3L	13851260	3L_13851260_SNP [dm3] 3L_13858160_SNP [dm6]	T	C	1.406e^-5	0.095	SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	17015901	3R_17015901_SNP [dm3] 3R_21190179_SNP [dm6]	A	G	1.418e^-5	0.096	INTRON SNF4Agamma	TF binding site BDTNP1_TFBS_dl
2L	14984388	2L_14984388_SNP [dm3] 2L_14984388_SNP [dm6]	T	C	1.421e^-5	0.096	INTRON mol
3L	22652173	3L_22652173_SNP [dm3] 3L_22659073_SNP [dm6]	G	C	1.462e^-5	0.096	INTERGENIC
2R	15137726	2R_15137726_SNP [dm3] 2R_19250221_SNP [dm6]	A	T	1.496e^-5	0.096	DOWNSTREAM CG33454 INTRON wbl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_z mE1_TFBS_Trl
2R	15137793	2R_15137793_SNP [dm3] 2R_19250288_SNP [dm6]	T	G	1.496e^-5	0.096	DOWNSTREAM CG33454 INTRON wbl	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_z
2R	7822570	2R_7822570_SNP [dm3] 2R_11935065_SNP [dm6]	T	G	1.511e^-5	0.096	INTERGENIC
2R	6825911	2R_6825911_SNP [dm3] 2R_10938406_SNP [dm6]	C	T	1.517e^-5	0.096	DOWNSTREAM Spn47C INTERGENIC
2R	5297589	2R_5297589_SNP [dm3] 2R_9410084_SNP [dm6]	C	T	1.520e^-5	0.096	UPSTREAM wun INTRON wun	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	12573014	3L_12573014_SNP [dm3] 3L_12579914_SNP [dm6]	A	T	1.530e^-5	0.096	UPSTREAM ara INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3R	5923093	3R_5923093_SNP [dm3] 3R_10097371_SNP [dm6]	G	T	1.541e^-5	0.096	EXON CR43459
3R	5936112	3R_5936112_SNP [dm3] 3R_10110390_SNP [dm6]	T	A	1.541e^-5	0.096	UPSTREAM Fmr1 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	5946480	3R_5946480_SNP [dm3] 3R_10120758_SNP [dm6]	T	A	1.541e^-5	0.096	NON_SYNONYMOUS_CODING gammaSnap2 DOWNSTREAM CG3940
3R	5968471	3R_5968471_SNP [dm3] 3R_10142749_SNP [dm6]	C	T	1.541e^-5	0.096	SYNONYMOUS_CODING TAF1B UPSTREAM CG42759
3R	6004815	3R_6004815_SNP [dm3] 3R_10179093_SNP [dm6]	G	A	1.541e^-5	0.096	INTRON CG12814
3R	6259407	3R_6259407_SNP [dm3] 3R_10433685_SNP [dm6]	A	G	1.541e^-5	0.096	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	6260109	3R_6260109_SNP [dm3] 3R_10434387_SNP [dm6]	T	G	1.541e^-5	0.096	UPSTREAM Cyp12e1 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2R	17258072	2R_17258072_SNP [dm3] 2R_21370567_SNP [dm6]	T	A	1.543e^-5	0.096	INTRON cv-2	TF binding site mE1_TFBS_cad
3L	16996672	3L_16996672_SNP [dm3] 3L_17003572_SNP [dm6]	G	A	1.550e^-5	0.096	INTRON CG3764
3R	9817421	3R_9817421_DEL [dm3] 3R_13991699_DEL [dm6]	AA	A	1.562e^-5	0.096	INTRON rdx
2L	2141038	2L_2141038_SNP [dm3] 2L_2141038_SNP [dm6]	C	T	1.569e^-5	0.096	SYNONYMOUS_CODING tho2	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	10081927	3R_10081927_SNP [dm3] 3R_14256205_SNP [dm6]	C	G	1.570e^-5	0.096	NON_SYNONYMOUS_CODING CG43179 INTRON Aats-met	TF binding site BDTNP1_TFBS_twi
3L	16808355	3L_16808355_SNP [dm3] 3L_16815255_SNP [dm6]	C	T	1.573e^-5	0.096	INTRON nudC & 1 other
3R	11351019	3R_11351019_SNP [dm3] 3R_15525297_SNP [dm6]	G	T	1.585e^-5	0.096	INTERGENIC
3R	12715723	3R_12715723_SNP [dm3] 3R_16890001_SNP [dm6]	T	C	1.589e^-5	0.096	INTRON iab-8
3R	4789124	3R_4789124_SNP [dm3] 3R_8963402_SNP [dm6]	G	A	1.594e^-5	0.096	UPSTREAM CG11966 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
2R	17567744	2R_17567744_SNP [dm3] 2R_21680239_SNP [dm6]	A	G	1.602e^-5	0.096	NON_SYNONYMOUS_CODING CG30263	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	22714555	3L_22714555_SNP [dm3] 3L_22721455_SNP [dm6]	T	C	1.604e^-5	0.096	NON_SYNONYMOUS_CODING CG14451	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	5903020	3R_5903020_SNP [dm3] 3R_10077298_SNP [dm6]	C	T	1.626e^-5	0.096	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3R	5907484	3R_5907484_SNP [dm3] 3R_10081762_SNP [dm6]	G	C	1.626e^-5	0.096	INTERGENIC	TF binding site mE1_TFBS_Trl
3R	5920291	3R_5920291_SNP [dm3] 3R_10094569_SNP [dm6]	A	G	1.626e^-5	0.096	EXON CR43459
3R	5936113	3R_5936113_SNP [dm3] 3R_10110391_SNP [dm6]	G	C	1.626e^-5	0.096	UPSTREAM Fmr1 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	5967982	3R_5967982_SNP [dm3] 3R_10142260_SNP [dm6]	G	T	1.626e^-5	0.096	NON_SYNONYMOUS_CODING TAF1B UPSTREAM CG42759
3R	5968276	3R_5968276_SNP [dm3] 3R_10142554_SNP [dm6]	C	T	1.626e^-5	0.096	SYNONYMOUS_CODING TAF1B UPSTREAM CG42759
3R	5968500	3R_5968500_SNP [dm3] 3R_10142778_SNP [dm6]	C	T	1.626e^-5	0.096	NON_SYNONYMOUS_CODING TAF1B UPSTREAM CG42759
3R	6249135	3R_6249135_SNP [dm3] 3R_10423413_SNP [dm6]	C	G	1.626e^-5	0.096	INTERGENIC
3R	6292772	3R_6292772_SNP [dm3] 3R_10467050_SNP [dm6]	G	A	1.626e^-5	0.096	INTERGENIC
3R	6303457	3R_6303457_SNP [dm3] 3R_10477735_SNP [dm6]	G	A	1.626e^-5	0.096	INTERGENIC	TF binding site mE1_TFBS_cad
3R	6312428	3R_6312428_SNP [dm3] 3R_10486706_SNP [dm6]	A	T	1.626e^-5	0.096	INTERGENIC
3R	6316709	3R_6316709_SNP [dm3] 3R_10490987_SNP [dm6]	G	A	1.626e^-5	0.096	UPSTREAM CR45576 INTERGENIC	TF binding site mE1_TFBS_HSA
3R	6351392	3R_6351392_SNP [dm3] 3R_10525670_SNP [dm6]	T	C	1.626e^-5	0.096	INTRON hth
3R	6504004	3R_6504004_SNP [dm3] 3R_10678282_SNP [dm6]	C	A	1.626e^-5	0.096	INTRON CG14688	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens
3R	6531789	3R_6531789_SNP [dm3] 3R_10706067_SNP [dm6]	T	A	1.626e^-5	0.096	NON_SYNONYMOUS_CODING CG31467 UPSTREAM CG31391 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	4822053	3R_4822053_SNP [dm3] 3R_8996331_SNP [dm6]	C	G	1.646e^-5	0.096	SYNONYMOUS_CODING CG31100
2L	9215098	2L_9215098_SNP [dm3] 2L_9215098_SNP [dm6]	G	T	1.656e^-5	0.096	INTRON tai
3L	13842253	3L_13842253_SNP [dm3] 3L_13849153_SNP [dm6]	C	T	1.667e^-5	0.096	SYNONYMOUS_CODING Hml
3L	13842268	3L_13842268_SNP [dm3] 3L_13849168_SNP [dm6]	C	T	1.667e^-5	0.096	SYNONYMOUS_CODING Hml
3R	16740395	3R_16740395_SNP [dm3] 3R_20914673_SNP [dm6]	C	A	1.673e^-5	0.096	INTRON CG31191 & 1 other	TF binding site BDTNP1_TFBS_twi
3R	4868315	3R_4868315_SNP [dm3] 3R_9042593_SNP [dm6]	T	A	1.674e^-5	0.096	UTR_3_PRIME Nmdmc DOWNSTREAM hyx
3R	4854487	3R_4854487_SNP [dm3] 3R_9028765_SNP [dm6]	C	T	1.686e^-5	0.096	INTRON neur	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3R	4868514	3R_4868514_SNP [dm3] 3R_9042792_SNP [dm6]	G	T	1.686e^-5	0.096	DOWNSTREAM hyx INTRON Nmdmc	TF binding site mE1_TFBS_chinmo
3R	4877819	3R_4877819_SNP [dm3] 3R_9052097_SNP [dm6]	G	C	1.686e^-5	0.096	UTR_3_PRIME Mst85C UPSTREAM Kdm2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Ubx
3R	4882865	3R_4882865_SNP [dm3] 3R_9057143_SNP [dm6]	A	C	1.686e^-5	0.096	INTRON Kdm2	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3R	4889987	3R_4889987_SNP [dm3] 3R_9064265_SNP [dm6]	C	T	1.686e^-5	0.096	NON_SYNONYMOUS_CODING beag UPSTREAM Ada	TF binding site mE1_TFBS_sens
X	19721676	X_19721676_SNP [dm3] X_19827643_SNP [dm6]	C	A	1.696e^-5	0.096	INTERGENIC
3L	20187490	3L_20187490_SNP [dm3] 3L_20194390_SNP [dm6]	C	A	1.700e^-5	0.096	INTRON CG42674
3L	13856140	3L_13856140_SNP [dm3] 3L_13863040_SNP [dm6]	A	G	1.712e^-5	0.096	INTRON CG8745	enhancer mE1_CBP_Enhancers TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens
3L	1602912	3L_1602912_SNP [dm3] 3L_1602912_SNP [dm6]	G	A	1.716e^-5	0.096	UPSTREAM CG33791 & 2 others INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad
3R	8397088	3R_8397088_SNP [dm3] 3R_12571366_SNP [dm6]	C	A	1.718e^-5	0.096	INTRON Octbeta2R
3L	142153	3L_142153_SNP [dm3] 3L_142153_SNP [dm6]	C	T	1.734e^-5	0.097	SYNONYMOUS_CODING Pdk1	TF binding site mE1_TFBS_cad
3R	6295886	3R_6295886_SNP [dm3] 3R_10470164_SNP [dm6]	A	G	1.755e^-5	0.098	INTERGENIC
2R	11446582	2R_11446582_SNP [dm3] 2R_15559077_SNP [dm6]	T	C	1.759e^-5	0.098	UPSTREAM CG12963 INTRON CG12963	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5972562	3R_5972562_SNP [dm3] 3R_10146840_SNP [dm6]	A	G	1.769e^-5	0.098	INTRON Invadolysin
3R	13098813	3R_13098813_SNP [dm3] 3R_17273091_SNP [dm6]	G	A	1.791e^-5	0.099	INTERGENIC
3R	5893276	3R_5893276_SNP [dm3] 3R_10067554_SNP [dm6]	G	A	1.820e^-5	0.1	NON_SYNONYMOUS_CODING CG33783 UPSTREAM CG33784
2L	7363786	2L_7363786_SNP [dm3] 2L_7363786_SNP [dm6]	G	A	1.824e^-5	0.1	INTRON Wnt10
3R	8869753	3R_8869753_SNP [dm3] 3R_13044031_SNP [dm6]	A	G	1.833e^-5	0.1	UTR_3_PRIME CG11670 UPSTREAM CG45122 & 1 other
2L	4165316	2L_4165316_SNP [dm3] 2L_4165316_SNP [dm6]	T	C	1.866e^-5	0.101	SYNONYMOUS_CODING Or24a
3R	4669356	3R_4669356_SNP [dm3] 3R_8843634_SNP [dm6]	A	C	1.874e^-5	0.101	INTRON pyd	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	18338320	3L_18338320_SNP [dm3] 3L_18345220_SNP [dm6]	A	C	1.880e^-5	0.101	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_Trl
3R	10368624	3R_10368624_SNP [dm3] 3R_14542902_SNP [dm6]	T	G	1.880e^-5	0.101	INTRON Pde6
2L	20787222	2L_20787222_SNP [dm3] 2L_20787222_SNP [dm6]	T	G	1.884e^-5	0.101	UPSTREAM Pomp INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_cnc
2L	20791988	2L_20791988_DEL [dm3] 2L_20791988_DEL [dm6]	GCAAGAAAATCGT...	G	1.884e^-5	0.101	INTRON vari	TF binding site mE1_TFBS_Trl
3R	6175171	3R_6175171_SNP [dm3] 3R_10349449_SNP [dm6]	T	A	1.885e^-5	0.101	NON_SYNONYMOUS_CODING CG31406 UPSTREAM jumu INTRON CG31406
2L	10709991	2L_10709991_SNP [dm3] 2L_10709991_SNP [dm6]	G	T	1.890e^-5	0.101	UPSTREAM CR44407 & 1 other INTERGENIC
2R	6524685	2R_6524685_SNP [dm3] 2R_10637180_SNP [dm6]	T	G	1.906e^-5	0.102	INTRON CG11883
X	14305240	X_14305240_SNP [dm3] X_14411207_SNP [dm6]	G	T	1.912e^-5	0.102	INTRON dpr8
3L	21470817	3L_21470817_SNP [dm3] 3L_21477717_SNP [dm6]	G	C	1.929e^-5	0.102	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	6682508	3R_6682508_SNP [dm3] 3R_10856786_SNP [dm6]	G	A	1.942e^-5	0.102	UPSTREAM CG4570 DOWNSTREAM CG4511 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	10278787	3R_10278787_DEL [dm3] 3R_14453065_DEL [dm6]	CAGC	C	1.943e^-5	0.102	INTRON cv-c	TF binding site mE1_TFBS_inv
3R	5959812	3R_5959812_SNP [dm3] 3R_10134090_SNP [dm6]	A	C	1.944e^-5	0.102	START_GAINED tws UTR_5_PRIME tws INTRON tws	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_Ubx
2R	9652382	2R_9652382_SNP [dm3] 2R_13764877_SNP [dm6]	G	T	1.958e^-5	0.102	INTERGENIC
2L	19907956	2L_19907956_SNP [dm3] 2L_19907956_SNP [dm6]	C	A	1.961e^-5	0.102	INTRON sick
2L	10956718	2L_10956718_SNP [dm3] 2L_10956718_SNP [dm6]	G	A	1.968e^-5	0.102	INTRON dpr2
3R	6564644	3R_6564644_SNP [dm3] 3R_10738922_SNP [dm6]	T	C	1.970e^-5	0.102	INTRON TkR86C	TF binding site mE1_TFBS_cad
3R	4824687	3R_4824687_SNP [dm3] 3R_8998965_SNP [dm6]	A	T	2.006e^-5	0.104	DOWNSTREAM CG11977 INTRON CG31100
3R	4884421	3R_4884421_SNP [dm3] 3R_9058699_SNP [dm6]	C	T	2.008e^-5	0.104	SYNONYMOUS_CODING Kdm2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
3R	6581798	3R_6581798_SNP [dm3] 3R_10756076_SNP [dm6]	C	A	2.025e^-5	0.104	UPSTREAM CG14691 & 1 other DOWNSTREAM CG31272 INTERGENIC	regulatory region REDfly_CRMs
3R	4893888	3R_4893888_SNP [dm3] 3R_9068166_SNP [dm6]	T	A	2.048e^-5	0.104	UTR_3_PRIME pum	TF binding site mE1_TFBS_D
3L	16808371	3L_16808371_SNP [dm3] 3L_16815271_SNP [dm6]	T	C	2.054e^-5	0.104	INTRON nudC & 1 other
3L	13846595	3L_13846595_SNP [dm3] 3L_13853495_SNP [dm6]	C	T	2.056e^-5	0.104	SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad
3R	4869021	3R_4869021_SNP [dm3] 3R_9043299_SNP [dm6]	C	T	2.060e^-5	0.104	NON_SYNONYMOUS_CODING Nmdmc DOWNSTREAM hyx & 1 other	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	4888408	3R_4888408_SNP [dm3] 3R_9062686_SNP [dm6]	T	A	2.060e^-5	0.104	UTR_3_PRIME Kdm2 DOWNSTREAM beag
3L	18009260	3L_18009260_SNP [dm3] 3L_18016160_SNP [dm6]	G	A	2.062e^-5	0.104	INTRON Eip75B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3L	12084251	3L_12084251_SNP [dm3] 3L_12091151_SNP [dm6]	C	T	2.064e^-5	0.104	INTERGENIC
3R	6113753	3R_6113753_SNP [dm3] 3R_10288031_SNP [dm6]	C	A	2.068e^-5	0.104	INTRON CG43143
3R	15105031	3R_15105031_SNP [dm3] 3R_19279309_SNP [dm6]	C	A	2.074e^-5	0.104	INTRON CR44173
3R	6234423	3R_6234423_SNP [dm3] 3R_10408701_SNP [dm6]	A	T	2.080e^-5	0.104	UTR_3_PRIME Irp-1B DOWNSTREAM mir-994 & 1 other	TF binding site mE1_TFBS_sbb
3R	4834000	3R_4834000_SNP [dm3] 3R_9008278_SNP [dm6]	C	A	2.082e^-5	0.104	UPSTREAM CG11983 DOWNSTREAM CG11982 INTERGENIC
3R	13275253	3R_13275253_SNP [dm3] 3R_17449531_SNP [dm6]	C	T	2.110e^-5	0.104	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3L	13822126	3L_13822126_SNP [dm3] 3L_13829026_SNP [dm6]	C	T	2.120e^-5	0.104	INTERGENIC
3L	13828207	3L_13828207_SNP [dm3] 3L_13835107_SNP [dm6]	A	T	2.120e^-5	0.104	INTERGENIC
3L	13839255	3L_13839255_SNP [dm3] 3L_13846155_SNP [dm6]	A	T	2.120e^-5	0.104	START_GAINED Hml UTR_5_PRIME Hml DOWNSTREAM Tsp68C
3L	13846451	3L_13846451_SNP [dm3] 3L_13853351_SNP [dm6]	C	T	2.120e^-5	0.104	SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad
3L	13856273	3L_13856273_SNP [dm3] 3L_13863173_SNP [dm6]	A	G	2.120e^-5	0.104	INTRON CG8745	enhancer mE1_CBP_Enhancers TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
3L	13859083	3L_13859083_SNP [dm3] 3L_13865983_SNP [dm6]	C	T	2.120e^-5	0.104	INTRON CG8745	TF binding site BDTNP1_TFBS_dl
3L	13859757	3L_13859757_SNP [dm3] 3L_13866657_SNP [dm6]	G	T	2.120e^-5	0.104	NON_SYNONYMOUS_CODING CG8745 DOWNSTREAM dysc	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	15092897	3R_15092897_SNP [dm3] 3R_19267175_SNP [dm6]	G	A	2.136e^-5	0.104	INTERGENIC
X	14502415	X_14502415_SNP [dm3] X_14608382_SNP [dm6]	A	G	2.137e^-5	0.104	INTRON NetA
3R	16932610	3R_16932610_SNP [dm3] 3R_21106888_SNP [dm6]	G	A	2.146e^-5	0.104	SYNONYMOUS_CODING Sec15	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
3R	10865962	3R_10865962_SNP [dm3] 3R_15040240_SNP [dm6]	A	C	2.151e^-5	0.104	DOWNSTREAM CR44944 INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	7550237	3L_7550237_SNP [dm3] 3L_7557137_SNP [dm6]	G	A	2.153e^-5	0.104	SYNONYMOUS_CODING CG14837
2R	17567785	2R_17567785_SNP [dm3] 2R_21680280_SNP [dm6]	G	T	2.172e^-5	0.104	SYNONYMOUS_CODING CG30263	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	13412637	X_13412637_SNP [dm3] X_13518604_SNP [dm6]	C	A	2.173e^-5	0.104	NON_SYNONYMOUS_CODING Neto INTRON Neto
X	14695622	X_14695622_SNP [dm3] X_14801589_SNP [dm6]	A	T	2.173e^-5	0.104	INTRON rut
2R	17614549	2R_17614549_SNP [dm3] 2R_21727044_SNP [dm6]	C	G	2.178e^-5	0.104	DOWNSTREAM CR44750 INTERGENIC	transposable element FlyBase
2L	7907847	2L_7907847_SNP [dm3] 2L_7907847_SNP [dm6]	T	A	2.210e^-5	0.105	INTRON Snoo
3R	2399129	3R_2399129_SNP [dm3] 3R_6573407_SNP [dm6]	G	T	2.216e^-5	0.105	INTRON dpr11
3R	4936059	3R_4936059_SNP [dm3] 3R_9110337_SNP [dm6]	G	T	2.224e^-5	0.105	INTRON pum
3R	6279124	3R_6279124_SNP [dm3] 3R_10453402_SNP [dm6]	G	A	2.237e^-5	0.105	INTERGENIC
3R	4857532	3R_4857532_SNP [dm3] 3R_9031810_SNP [dm6]	C	A	2.239e^-5	0.105	INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
3R	5959014	3R_5959014_SNP [dm3] 3R_10133292_SNP [dm6]	C	A	2.246e^-5	0.105	UTR_5_PRIME tws INTRON tws	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	11794843	3L_11794843_INS [dm3] 3L_11801743_INS [dm6]	T	TATTATATATATAT...	2.252e^-5	0.105	UPSTREAM CG10361 & 1 other DOWNSTREAM CG42255 INTERGENIC
2L	20802110	2L_20802110_DEL [dm3] 2L_20802110_DEL [dm6]	TATGTTTTGCTCATGT...	T	2.253e^-5	0.105	INTRON CG9328	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
X	4345348	X_4345348_SNP [dm3] X_4451315_SNP [dm6]	T	A	2.254e^-5	0.105	INTRON CR32773 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	4861376	3R_4861376_SNP [dm3] 3R_9035654_SNP [dm6]	C	T	2.256e^-5	0.105	INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
3R	4891025	3R_4891025_SNP [dm3] 3R_9065303_SNP [dm6]	G	A	2.256e^-5	0.105	NON_SYNONYMOUS_CODING Ada UPSTREAM beag	insulator Insulator_Class_I.mE01 TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	13176402	3L_13176402_SNP [dm3] 3L_13183302_SNP [dm6]	G	A	2.259e^-5	0.105	INTERGENIC
3L	13563119	3L_13563119_SNP [dm3] 3L_13570019_SNP [dm6]	A	C	2.262e^-5	0.105	INTRON bru-3	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	4872381	3R_4872381_SNP [dm3] 3R_9046659_SNP [dm6]	G	A	2.272e^-5	0.105	SYNONYMOUS_CODING Rel INTRON Nmdmc	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_sens
3R	13275323	3R_13275323_SNP [dm3] 3R_17449601_SNP [dm6]	T	C	2.275e^-5	0.105	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3L	12960718	3L_12960718_SNP [dm3] 3L_12967618_SNP [dm6]	C	T	2.281e^-5	0.105	NON_SYNONYMOUS_CODING Or69a
3L	13859269	3L_13859269_SNP [dm3] 3L_13866169_SNP [dm6]	T	A	2.286e^-5	0.105	INTRON CG8745	TF binding site BDTNP1_TFBS_dl
2L	11021860	2L_11021860_SNP [dm3] 2L_11021860_SNP [dm6]	G	A	2.303e^-5	0.105	INTRON Samuel
3R	12233718	3R_12233718_SNP [dm3] 3R_16407996_SNP [dm6]	G	A	2.312e^-5	0.105	DOWNSTREAM CR45630 INTERGENIC
3R	6716643	3R_6716643_SNP [dm3] 3R_10890921_SNP [dm6]	T	C	2.323e^-5	0.106	INTRON Leash & 1 other
3L	13829543	3L_13829543_DEL [dm3] 3L_13836443_DEL [dm6]	TT	T	2.367e^-5	0.106	INTERGENIC
3L	13835603	3L_13835603_SNP [dm3] 3L_13842503_SNP [dm6]	G	A	2.367e^-5	0.106	UTR_3_PRIME CG8750 UPSTREAM CG8757 DOWNSTREAM CG8750
2L	19815257	2L_19815257_SNP [dm3] 2L_19815257_SNP [dm6]	C	T	2.373e^-5	0.106	UPSTREAM CG13962 DOWNSTREAM snRNA:U2:38ABa INTRON sick	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	4082117	X_4082117_SNP [dm3] X_4188084_SNP [dm6]	C	T	2.373e^-5	0.106	INTRON Fas2
3R	8387019	3R_8387019_SNP [dm3] 3R_12561297_SNP [dm6]	C	T	2.374e^-5	0.106	UTR_5_PRIME Octbeta2R UPSTREAM Octbeta2R
2L	10200249	2L_10200249_SNP [dm3] 2L_10200249_SNP [dm6]	G	T	2.380e^-5	0.106	UPSTREAM RpL7 INTRON Ripalpha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA mE1_TFBS_sens
3L	13185056	3L_13185056_SNP [dm3] 3L_13191956_SNP [dm6]	A	C	2.384e^-5	0.106	INTERGENIC
2L	20531806	2L_20531806_DEL [dm3] 2L_20531806_DEL [dm6]	AA	A	2.384e^-5	0.106	UTR_3_PRIME CG44270
2L	7615872	2L_7615872_SNP [dm3] 2L_7615872_SNP [dm6]	C	A	2.387e^-5	0.106	NON_SYNONYMOUS_CODING CG6739 UTR_3_PRIME CG6739
2R	18794052	2R_18794052_SNP [dm3] 2R_22906529_SNP [dm6]	A	T	2.387e^-5	0.106	INTRON nahoda
3R	7012637	3R_7012637_SNP [dm3] 3R_11186915_SNP [dm6]	T	C	2.411e^-5	0.106	INTERGENIC
X	15517162	X_15517162_SNP [dm3] X_15623129_SNP [dm6]	C	T	2.424e^-5	0.106	INTRON sog	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	15517164	X_15517164_SNP [dm3] X_15623131_SNP [dm6]	A	G	2.424e^-5	0.106	INTRON sog	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	22631368	3L_22631368_SNP [dm3] 3L_22638268_SNP [dm6]	G	A	2.447e^-5	0.106	UPSTREAM CG14459 INTERGENIC
3L	22690909	3L_22690909_SNP [dm3] 3L_22697809_SNP [dm6]	A	G	2.447e^-5	0.106	UTR_3_PRIME CG32453 DOWNSTREAM CG32453
2L	1396403	2L_1396403_SNP [dm3] 2L_1396403_SNP [dm6]	C	T	2.453e^-5	0.106	INTRON lea	TF binding site BDTNP1_TFBS_da
3R	5917623	3R_5917623_SNP [dm3] 3R_10091901_SNP [dm6]	G	A	2.453e^-5	0.106	DOWNSTREAM mir-317 INTERGENIC	TF binding site BDTNP1_TFBS_da
2R	9410653	2R_9410653_SNP [dm3] 2R_13523148_SNP [dm6]	T	C	2.455e^-5	0.106	SYNONYMOUS_CODING CG13331 INTRON Vmat	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	7445791	3L_7445791_SNP [dm3] 3L_7452691_SNP [dm6]	A	T	2.455e^-5	0.106	DOWNSTREAM CG33278 INTRON CG42458	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	15393229	X_15393229_SNP [dm3] X_15499196_SNP [dm6]	C	T	2.456e^-5	0.106	START_GAINED Gmap UTR_5_PRIME Gmap INTRON Gmap	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	4858710	3R_4858710_SNP [dm3] 3R_9032988_SNP [dm6]	G	C	2.463e^-5	0.106	INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	4954643	3R_4954643_SNP [dm3] 3R_9128921_SNP [dm6]	C	T	2.464e^-5	0.106	INTRON pum	TF binding site mE1_TFBS_Trl
2L	11442802	2L_11442802_SNP [dm3] 2L_11442802_SNP [dm6]	G	A	2.465e^-5	0.106	INTRON salm
2R	11043889	2R_11043889_SNP [dm3] 2R_15156384_SNP [dm6]	A	G	2.474e^-5	0.106	INTRON igl
3R	4864797	3R_4864797_SNP [dm3] 3R_9039075_SNP [dm6]	G	T	2.494e^-5	0.107	UPSTREAM hyx INTRON neur & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
3R	10771778	3R_10771778_SNP [dm3] 3R_14946056_SNP [dm6]	C	T	2.496e^-5	0.107	INTERGENIC
X	14955301	X_14955301_SNP [dm3] X_15061268_SNP [dm6]	A	T	2.498e^-5	0.107	INTRON hiw
3R	5140120	3R_5140120_SNP [dm3] 3R_9314398_SNP [dm6]	T	C	2.506e^-5	0.107	INTRON CG8861
3R	14695949	3R_14695949_SNP [dm3] 3R_18870227_SNP [dm6]	C	T	2.533e^-5	0.108	INTERGENIC
3R	5441324	3R_5441324_SNP [dm3] 3R_9615602_SNP [dm6]	A	C	2.544e^-5	0.108	INTRON CG8312	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad
3L	12084258	3L_12084258_INS [dm3] 3L_12091158_INS [dm6]	A	ATGTA	2.557e^-5	0.108	INTERGENIC
3R	6275801	3R_6275801_SNP [dm3] 3R_10450079_SNP [dm6]	A	C	2.567e^-5	0.108	INTERGENIC
2L	11369837	2L_11369837_SNP [dm3] 2L_11369837_SNP [dm6]	A	C	2.568e^-5	0.108	NON_SYNONYMOUS_CODING salr
2R	6506093	2R_6506093_INS [dm3] 2R_10618588_INS [dm6]	C	CCCTCTC	2.597e^-5	0.109	INTRON CG11883	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	9733756	3R_9733756_SNP [dm3] 3R_13908034_SNP [dm6]	C	A	2.600e^-5	0.109	INTERGENIC
2L	8800670	2L_8800670_SNP [dm3] 2L_8800670_SNP [dm6]	G	T	2.622e^-5	0.109	INTERGENIC
3L	21267778	3L_21267778_SNP [dm3] 3L_21274678_SNP [dm6]	C	A	2.624e^-5	0.109	INTRON AcCoAS
3R	4847698	3R_4847698_SNP [dm3] 3R_9021976_SNP [dm6]	G	T	2.631e^-5	0.109	NON_SYNONYMOUS_CODING neur UPSTREAM CR31429	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3R	18480138	3R_18480138_DEL [dm3] 3R_22654416_DEL [dm6]	GC	T	2.648e^-5	0.11	INTRON CG45058
3R	7012622	3R_7012622_SNP [dm3] 3R_11186900_SNP [dm6]	G	C	2.662e^-5	0.11	INTERGENIC
3R	6682305	3R_6682305_SNP [dm3] 3R_10856583_SNP [dm6]	T	C	2.673e^-5	0.11	UPSTREAM CG4570 DOWNSTREAM CG4511 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	6683360	3R_6683360_SNP [dm3] 3R_10857638_SNP [dm6]	C	T	2.673e^-5	0.11	SYNONYMOUS_CODING CG4570 DOWNSTREAM CG14694	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	3091303	2R_3091303_SNP [dm3] 2R_7203798_SNP [dm6]	G	T	2.685e^-5	0.111	INTRON pk
X	2388012	X_2388012_SNP [dm3] X_2493979_SNP [dm6]	A	G	2.716e^-5	0.112	INTRON trol
2L	5306233	2L_5306233_SNP [dm3] 2L_5306233_SNP [dm6]	T	C	2.734e^-5	0.112	INTRON vri	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
X	2388150	X_2388150_SNP [dm3] X_2494117_SNP [dm6]	T	C	2.745e^-5	0.112	INTRON trol
2L	16572800	2L_16572800_SNP [dm3] 2L_16572800_SNP [dm6]	G	C	2.751e^-5	0.112	INTRON CG42389
2L	21898854	2L_21898854_SNP [dm3] 2L_21898854_SNP [dm6]	G	T	2.761e^-5	0.112	UPSTREAM CG11629 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3R	5468480	3R_5468480_SNP [dm3] 3R_9642758_SNP [dm6]	T	C	2.775e^-5	0.112	INTRON Dh44
X	14305241	X_14305241_SNP [dm3] X_14411208_SNP [dm6]	A	T	2.776e^-5	0.112	INTRON dpr8
3L	12022258	3L_12022258_SNP [dm3] 3L_12029158_SNP [dm6]	T	A	2.783e^-5	0.112	INTRON rols	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	10821007	X_10821007_SNP [dm3] X_10926974_SNP [dm6]	T	C	2.797e^-5	0.112	UPSTREAM CG2145 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA
3L	7550203	3L_7550203_SNP [dm3] 3L_7557103_SNP [dm6]	G	T	2.805e^-5	0.112	SYNONYMOUS_CODING CG14837
3L	7550208	3L_7550208_SNP [dm3] 3L_7557108_SNP [dm6]	G	A	2.805e^-5	0.112	NON_SYNONYMOUS_CODING CG14837
3L	13819320	3L_13819320_SNP [dm3] 3L_13826220_SNP [dm6]	C	A	2.807e^-5	0.112	INTERGENIC
3L	20070989	3L_20070989_SNP [dm3] 3L_20077889_SNP [dm6]	C	T	2.811e^-5	0.112	INTRON sNPF-R
3L	20074818	3L_20074818_SNP [dm3] 3L_20081718_SNP [dm6]	A	C	2.811e^-5	0.112	INTRON sNPF-R
3L	20080308	3L_20080308_SNP [dm3] 3L_20087208_SNP [dm6]	A	G	2.811e^-5	0.112	INTRON sNPF-R
3R	4249357	3R_4249357_SNP [dm3] 3R_8423635_SNP [dm6]	G	C	2.812e^-5	0.112	INTRON CG45263
3R	5140188	3R_5140188_SNP [dm3] 3R_9314466_SNP [dm6]	G	T	2.824e^-5	0.112	INTRON CG8861
3L	13830352	3L_13830352_SNP [dm3] 3L_13837252_SNP [dm6]	C	A	2.851e^-5	0.113	UPSTREAM CG43184 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	12325375	X_12325375_SNP [dm3] X_12431342_SNP [dm6]	G	A	2.855e^-5	0.113	UPSTREAM Pkcdelta INTERGENIC
2R	12325755	2R_12325755_SNP [dm3] 2R_16438250_SNP [dm6]	T	C	2.856e^-5	0.113	INTERGENIC
3R	17113519	3R_17113519_SNP [dm3] 3R_21287797_SNP [dm6]	C	T	2.860e^-5	0.113	INTRON SIFaR	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
2R	2747286	2R_2747286_SNP [dm3] 2R_6859781_SNP [dm6]	C	A	2.884e^-5	0.113	INTERGENIC
3R	14697838	3R_14697838_SNP [dm3] 3R_18872116_SNP [dm6]	A	G	2.895e^-5	0.113	INTERGENIC
2L	5563793	2L_5563793_SNP [dm3] 2L_5563793_SNP [dm6]	G	C	2.911e^-5	0.113	DOWNSTREAM GluRIIB INTERGENIC
3R	5449232	3R_5449232_SNP [dm3] 3R_9623510_SNP [dm6]	G	A	2.918e^-5	0.113	SYNONYMOUS_CODING CG8312	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	5457276	3R_5457276_SNP [dm3] 3R_9631554_SNP [dm6]	A	T	2.936e^-5	0.113	UPSTREAM SpdS & 1 other DOWNSTREAM CR45053 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	4345380	X_4345380_SNP [dm3] X_4451347_SNP [dm6]	G	A	2.939e^-5	0.113	INTRON CR32773 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	4839387	3R_4839387_SNP [dm3] 3R_9013665_SNP [dm6]	G	A	2.956e^-5	0.113	UPSTREAM CG11984 INTRON CG11984	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
3R	5773679	3R_5773679_SNP [dm3] 3R_9947957_SNP [dm6]	G	T	2.958e^-5	0.113	INTRON Glut4EF
3R	5789049	3R_5789049_SNP [dm3] 3R_9963327_SNP [dm6]	G	C	2.958e^-5	0.113	INTRON Glut4EF
3R	5789331	3R_5789331_SNP [dm3] 3R_9963609_SNP [dm6]	C	A	2.958e^-5	0.113	INTRON Glut4EF
3R	10995024	3R_10995024_DEL [dm3] 3R_15169302_DEL [dm6]	CC	C	2.963e^-5	0.113	INTRON Gyc88E
X	18721920	X_18721920_SNP [dm3] X_18827887_SNP [dm6]	C	T	2.987e^-5	0.113	UTR_3_PRIME CG42450
3L	20070268	3L_20070268_SNP [dm3] 3L_20077168_SNP [dm6]	A	C	2.995e^-5	0.113	INTRON sNPF-R
3L	20070280	3L_20070280_SNP [dm3] 3L_20077180_SNP [dm6]	C	T	2.995e^-5	0.113	INTRON sNPF-R
3L	20072451	3L_20072451_SNP [dm3] 3L_20079351_SNP [dm6]	T	C	2.995e^-5	0.113	INTRON sNPF-R
3L	20083598	3L_20083598_SNP [dm3] 3L_20090498_SNP [dm6]	C	T	2.995e^-5	0.113	INTERGENIC
3R	22706186	3R_22706186_SNP [dm3] 3R_26880464_SNP [dm6]	G	A	2.996e^-5	0.113	DOWNSTREAM CG5500 INTRON ro	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3R	22706191	3R_22706191_SNP [dm3] 3R_26880469_SNP [dm6]	G	A	2.996e^-5	0.113	DOWNSTREAM CG5500 INTRON ro	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3R	22706206	3R_22706206_SNP [dm3] 3R_26880484_SNP [dm6]	G	A	2.996e^-5	0.113	DOWNSTREAM CG5500 INTRON ro	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3R	5465933	3R_5465933_SNP [dm3] 3R_9640211_SNP [dm6]	G	A	3.012e^-5	0.113	UPSTREAM Dh44 INTRON Dh44
3R	10270709	3R_10270709_SNP [dm3] 3R_14444987_SNP [dm6]	C	A	3.013e^-5	0.113	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	12624532	2R_12624532_SNP [dm3] 2R_16737027_SNP [dm6]	G	T	3.032e^-5	0.114	UTR_3_PRIME CG43104
2R	6504030	2R_6504030_DEL [dm3] 2R_10616525_DEL [dm6]	ACCTA	T	3.034e^-5	0.114	UTR_3_PRIME psq DOWNSTREAM psq
X	11168158	X_11168158_SNP [dm3] X_11274125_SNP [dm6]	T	G	3.037e^-5	0.114	INTRON CG44422
3L	16819618	3L_16819618_SNP [dm3] 3L_16826518_SNP [dm6]	T	A	3.044e^-5	0.114	INTRON CG13024
3L	12065807	3L_12065807_SNP [dm3] 3L_12072707_SNP [dm6]	C	T	3.065e^-5	0.114	INTRON Sema-5c	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA
3L	12065815	3L_12065815_SNP [dm3] 3L_12072715_SNP [dm6]	T	G	3.065e^-5	0.114	INTRON Sema-5c	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA
3L	12065817	3L_12065817_INS [dm3] 3L_12072717_INS [dm6]	T	TT	3.065e^-5	0.114	INTRON Sema-5c	TF binding site mE1_TFBS_hkb mE1_TFBS_HSA
X	3066327	X_3066327_DEL [dm3] X_3172294_DEL [dm6]	ACATA	G	3.095e^-5	0.114	UTR_3_PRIME CG18508 DOWNSTREAM CG18508 & 1 other
2L	14980825	2L_14980825_SNP [dm3] 2L_14980825_SNP [dm6]	T	A	3.096e^-5	0.114	INTRON mol
2L	14980933	2L_14980933_SNP [dm3] 2L_14980933_SNP [dm6]	T	A	3.096e^-5	0.114	INTRON mol
2L	7641644	2L_7641644_SNP [dm3] 2L_7641644_SNP [dm6]	G	T	3.109e^-5	0.115	DOWNSTREAM Slob INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_run mE1_TFBS_zfh1
2L	19785608	2L_19785608_SNP [dm3] 2L_19785608_SNP [dm6]	T	G	3.120e^-5	0.115	INTRON CdGAPr
3R	10893783	3R_10893783_INS [dm3] 3R_15068061_INS [dm6]	A	ATAGCAA	3.124e^-5	0.115	INTRON dpr9
2R	9771147	2R_9771147_SNP [dm3] 2R_13883642_SNP [dm6]	T	C	3.136e^-5	0.115	INTRON shot
3R	4822536	3R_4822536_SNP [dm3] 3R_8996814_SNP [dm6]	T	C	3.152e^-5	0.115	SYNONYMOUS_CODING CG31100 UPSTREAM CG11977
3L	11349540	3L_11349540_SNP [dm3] 3L_11356440_SNP [dm6]	A	T	3.163e^-5	0.115	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	14281064	2L_14281064_SNP [dm3] 2L_14281064_SNP [dm6]	A	G	3.164e^-5	0.115	INTRON wb	TF binding site BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
X	14111582	X_14111582_SNP [dm3] X_14217549_SNP [dm6]	C	T	3.168e^-5	0.115	INTRON l_1_G0007
3R	14240207	3R_14240207_SNP [dm3] 3R_18414485_SNP [dm6]	T	C	3.180e^-5	0.115	UTR_3_PRIME fru DOWNSTREAM fru
3R	10771720	3R_10771720_SNP [dm3] 3R_14945998_SNP [dm6]	A	C	3.180e^-5	0.115	INTERGENIC
3L	13836156	3L_13836156_SNP [dm3] 3L_13843056_SNP [dm6]	G	A	3.223e^-5	0.116	UPSTREAM CG8757 & 2 others INTERGENIC
2L	13891097	2L_13891097_SNP [dm3] 2L_13891097_SNP [dm6]	G	C	3.226e^-5	0.116	INTRON CenG1A
3R	5456618	3R_5456618_SNP [dm3] 3R_9630896_SNP [dm6]	G	T	3.226e^-5	0.116	UPSTREAM SpdS & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
X	12325376	X_12325376_SNP [dm3] X_12431343_SNP [dm6]	T	C	3.244e^-5	0.116	UPSTREAM Pkcdelta INTERGENIC
3L	13828080	3L_13828080_INS [dm3] 3L_13834980_INS [dm6]	T	TT	3.249e^-5	0.116	INTERGENIC
X	14111613	X_14111613_SNP [dm3] X_14217580_SNP [dm6]	T	C	3.262e^-5	0.117	INTRON l_1_G0007
X	19220513	X_19220513_SNP [dm3] X_19326480_SNP [dm6]	T	G	3.273e^-5	0.117	DOWNSTREAM nAChRalpha7 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_inv
2L	19863536	2L_19863536_SNP [dm3] 2L_19863536_SNP [dm6]	C	G	3.275e^-5	0.117	INTRON sick
3R	9587906	3R_9587906_SNP [dm3] 3R_13762184_SNP [dm6]	A	G	3.280e^-5	0.117	UTR_3_PRIME CG34383 DOWNSTREAM CG34383 INTRON CG34383
3L	15905731	3L_15905731_SNP [dm3] 3L_15912631_SNP [dm6]	A	T	3.301e^-5	0.117	INTRON sff
3L	15905734	3L_15905734_INS [dm3] 3L_15912634_INS [dm6]	T	TCACT	3.301e^-5	0.117	INTRON sff
3L	20067269	3L_20067269_SNP [dm3] 3L_20074169_SNP [dm6]	G	A	3.347e^-5	0.118	SYNONYMOUS_CODING sNPF-R	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo
3R	6689387	3R_6689387_SNP [dm3] 3R_10863665_SNP [dm6]	C	A	3.347e^-5	0.118	SYNONYMOUS_CODING SelR UPSTREAM CG6574 DOWNSTREAM SelR	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cnc mE1_TFBS_disco mE1_TFBS_HSA
3L	1068957	3L_1068957_SNP [dm3] 3L_1068957_SNP [dm6]	C	A	3.350e^-5	0.118	INTRON bab1
X	9641729	X_9641729_SNP [dm3] X_9747696_SNP [dm6]	A	T	3.353e^-5	0.118	INTRON Sp1	TF binding site BDTNP1_TFBS_dl
3R	5761007	3R_5761007_SNP [dm3] 3R_9935285_SNP [dm6]	T	A	3.369e^-5	0.118	INTRON Glut4EF
3R	5780934	3R_5780934_SNP [dm3] 3R_9955212_SNP [dm6]	G	A	3.369e^-5	0.118	UTR_3_PRIME Glut4EF INTRON Glut4EF	TF binding site BDTNP1_TFBS_dl
3R	5805763	3R_5805763_SNP [dm3] 3R_9980041_SNP [dm6]	G	T	3.369e^-5	0.118	INTRON Glut4EF	TF binding site mE1_TFBS_Trl
3R	6259165	3R_6259165_SNP [dm3] 3R_10433443_SNP [dm6]	C	T	3.375e^-5	0.118	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	8375615	3R_8375615_SNP [dm3] 3R_12549893_SNP [dm6]	C	A	3.380e^-5	0.118	DOWNSTREAM Octbeta2R INTERGENIC
2L	22048348	2L_22048348_SNP [dm3] 2L_22048348_SNP [dm6]	A	G	3.408e^-5	0.118	INTERGENIC	transposable element FlyBase
3R	13454282	3R_13454282_SNP [dm3] 3R_17628560_SNP [dm6]	A	C	3.410e^-5	0.118	DOWNSTREAM tRNA:V4:90C INTRON CG14325
4	866672	4_866672_SNP [dm3] 4_846046_SNP [dm6]	G	A	3.446e^-5	0.119	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	21119408	3L_21119408_SNP [dm3] 3L_21126308_SNP [dm6]	C	T	3.461e^-5	0.12	INTRON ko
3R	14429995	3R_14429995_SNP [dm3] 3R_18604273_SNP [dm6]	G	T	3.479e^-5	0.12	INTRON qin & 1 other
2L	7103758	2L_7103758_SNP [dm3] 2L_7103758_SNP [dm6]	C	T	3.486e^-5	0.12	INTRON Pvf3
2L	9163074	2L_9163074_SNP [dm3] 2L_9163074_SNP [dm6]	C	T	3.488e^-5	0.12	INTRON CG32982
3R	12117085	3R_12117085_INS [dm3] 3R_16291363_INS [dm6]	T	TAT	3.492e^-5	0.12	INTRON gish	TF binding site mE1_TFBS_bab1
3R	14650451	3R_14650451_SNP [dm3] 3R_18824729_SNP [dm6]	G	T	3.493e^-5	0.12	INTRON CG18208
3R	13275249	3R_13275249_SNP [dm3] 3R_17449527_SNP [dm6]	T	A	3.500e^-5	0.12	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3R	13974498	3R_13974498_INS [dm3] 3R_18148776_INS [dm6]	A	AA	3.501e^-5	0.12	INTERGENIC
X	11046111	X_11046111_SNP [dm3] X_11152078_SNP [dm6]	C	A	3.512e^-5	0.12	SYNONYMOUS_CODING Lint-1 DOWNSTREAM rtv
3L	13121792	3L_13121792_SNP [dm3] 3L_13128692_SNP [dm6]	A	G	3.527e^-5	0.12	INTERGENIC
3L	13121796	3L_13121796_SNP [dm3] 3L_13128696_SNP [dm6]	A	T	3.527e^-5	0.12	INTERGENIC
2L	10452433	2L_10452433_SNP [dm3] 2L_10452433_SNP [dm6]	C	A	3.533e^-5	0.12	UPSTREAM ppk10 DOWNSTREAM CG5322 INTERGENIC
3R	10789331	3R_10789331_SNP [dm3] 3R_14963609_SNP [dm6]	T	A	3.554e^-5	0.12	INTERGENIC
2L	16756774	2L_16756774_SNP [dm3] 2L_16756774_SNP [dm6]	A	G	3.558e^-5	0.12	INTRON yellow-b
2L	16756776	2L_16756776_SNP [dm3] 2L_16756776_SNP [dm6]	T	C	3.558e^-5	0.12	INTRON yellow-b
3R	13312884	3R_13312884_SNP [dm3] 3R_17487162_SNP [dm6]	G	T	3.563e^-5	0.12	INTRON Dscam3
3R	4225570	3R_4225570_SNP [dm3] 3R_8399848_SNP [dm6]	G	C	3.566e^-5	0.12	INTRON CG45263
3L	11569123	3L_11569123_SNP [dm3] 3L_11576023_SNP [dm6]	A	C	3.575e^-5	0.12	SPLICE_SITE_REGION CG33489 DOWNSTREAM CG33271 INTRON CG33489
2L	14276877	2L_14276877_SNP [dm3] 2L_14276877_SNP [dm6]	A	T	3.579e^-5	0.12	UPSTREAM CG32971 INTRON wb & 1 other
3L	15733127	3L_15733127_SNP [dm3] 3L_15740027_SNP [dm6]	G	C	3.582e^-5	0.12	INTERGENIC
X	14505244	X_14505244_SNP [dm3] X_14611211_SNP [dm6]	T	C	3.609e^-5	0.12	INTRON NetA	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	17682192	3R_17682192_SNP [dm3] 3R_21856470_SNP [dm6]	G	A	3.613e^-5	0.12	UPSTREAM glec INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	23294962	3L_23294962_SNP [dm3] 3L_23301862_SNP [dm6]	T	A	3.630e^-5	0.12	INTERGENIC	transposable element FlyBase
2L	18329994	2L_18329994_SNP [dm3] 2L_18329994_SNP [dm6]	G	A	3.634e^-5	0.12	INTRON Fas3
X	14763002	X_14763002_DEL [dm3] X_14868969_DEL [dm6]	TA	G	3.635e^-5	0.12	INTRON Flo2 & 1 other
2R	17766990	2R_17766990_SNP [dm3] 2R_21879485_SNP [dm6]	A	G	3.637e^-5	0.12	INTRON Fili
X	10957721	X_10957721_SNP [dm3] X_11063688_SNP [dm6]	A	C	3.644e^-5	0.12	UPSTREAM CG1537 INTERGENIC
2R	17398110	2R_17398110_SNP [dm3] 2R_21510605_SNP [dm6]	G	A	3.645e^-5	0.12	INTRON MESK2	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	4329875	2L_4329875_SNP [dm3] 2L_4329875_SNP [dm6]	C	T	3.669e^-5	0.12	SYNONYMOUS_CODING CG16857
2L	3142178	2L_3142178_SNP [dm3] 2L_3142178_SNP [dm6]	C	A	3.673e^-5	0.12	INTRON toc
3R	9866988	3R_9866988_SNP [dm3] 3R_14041266_SNP [dm6]	C	T	3.683e^-5	0.12	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	11826939	2L_11826939_SNP [dm3] 2L_11826939_SNP [dm6]	C	T	3.685e^-5	0.12	DOWNSTREAM esc INTRON Pde1c
X	14679288	X_14679288_SNP [dm3] X_14785255_SNP [dm6]	T	C	3.688e^-5	0.12	UTR_3_PRIME Ag5r
3R	4790679	3R_4790679_SNP [dm3] 3R_8964957_SNP [dm6]	T	C	3.690e^-5	0.12	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA
2L	7643325	2L_7643325_SNP [dm3] 2L_7643325_SNP [dm6]	T	A	3.693e^-5	0.12	UTR_3_PRIME Slob DOWNSTREAM Slob
2R	900208	2R_900208_DEL [dm3] 2R_5012703_DEL [dm6]	AT	A	3.709e^-5	0.12	INTRON Ir41a	transposable element FlyBase
3L	17558363	3L_17558363_SNP [dm3] 3L_17565263_SNP [dm6]	A	C	3.711e^-5	0.12	DOWNSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_HSA
3R	5449358	3R_5449358_SNP [dm3] 3R_9623636_SNP [dm6]	C	T	3.718e^-5	0.12	SYNONYMOUS_CODING CG8312	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo
3R	4239799	3R_4239799_SNP [dm3] 3R_8414077_SNP [dm6]	T	A	3.743e^-5	0.121	INTRON CG45263
3L	11759492	3L_11759492_DEL [dm3] 3L_11766392_DEL [dm6]	AA	A	3.767e^-5	0.121	UPSTREAM CG6024 DOWNSTREAM Muc68D INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_sbb mE1_TFBS_Trl
3L	11759507	3L_11759507_INS [dm3] 3L_11766407_INS [dm6]	T	TTTAACAGG	3.767e^-5	0.121	UPSTREAM CG6024 DOWNSTREAM Muc68D INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_sbb mE1_TFBS_Trl
3L	11759535	3L_11759535_SNP [dm3] 3L_11766435_SNP [dm6]	G	A	3.767e^-5	0.121	UPSTREAM CG6024 DOWNSTREAM Muc68D INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_sbb mE1_TFBS_Trl
3R	10032344	3R_10032344_SNP [dm3] 3R_14206622_SNP [dm6]	A	T	3.771e^-5	0.121	INTRON Dop1R1
3L	14500428	3L_14500428_SNP [dm3] 3L_14507328_SNP [dm6]	T	A	3.772e^-5	0.121	INTRON bbg
3L	14527848	3L_14527848_SNP [dm3] 3L_14534748_SNP [dm6]	G	A	3.781e^-5	0.121	INTRON bbg	TF binding site mE1_TFBS_Trl
2L	9821138	2L_9821138_SNP [dm3] 2L_9821138_SNP [dm6]	C	T	3.788e^-5	0.121	INTRON nAChRalpha6
3R	4711067	3R_4711067_SNP [dm3] 3R_8885345_SNP [dm6]	C	A	3.788e^-5	0.121	INTRON pyd
2R	9802355	2R_9802355_DEL [dm3] 2R_13914850_DEL [dm6]	GAG	G	3.799e^-5	0.121	INTRON shot
3L	13833203	3L_13833203_SNP [dm3] 3L_13840103_SNP [dm6]	A	T	3.807e^-5	0.121	DOWNSTREAM CG8757 INTERGENIC	TF binding site mE1_TFBS_HSA
3L	16629146	3L_16629146_SNP [dm3] 3L_16636046_SNP [dm6]	A	T	3.813e^-5	0.121	INTRON Abl	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2R	14262884	2R_14262884_SNP [dm3] 2R_18375379_SNP [dm6]	C	T	3.823e^-5	0.121	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	6273083	3R_6273083_SNP [dm3] 3R_10447361_SNP [dm6]	C	T	3.842e^-5	0.121	INTERGENIC
3L	7043923	3L_7043923_SNP [dm3] 3L_7050823_SNP [dm6]	A	C	3.855e^-5	0.121	INTRON Mp
2R	16498623	2R_16498623_SNP [dm3] 2R_20611118_SNP [dm6]	G	T	3.857e^-5	0.121	INTRON Hil
3R	4019583	3R_4019583_SNP [dm3] 3R_8193861_SNP [dm6]	C	A	3.875e^-5	0.122	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	4784168	3R_4784168_SNP [dm3] 3R_8958446_SNP [dm6]	A	G	3.897e^-5	0.122	INTRON CG11966	TF binding site mE1_TFBS_cad
2R	9518037	2R_9518037_SNP [dm3] 2R_13630532_SNP [dm6]	G	C	3.902e^-5	0.122	INTRON fas
2L	8147219	2L_8147219_SNP [dm3] 2L_8147219_SNP [dm6]	C	T	3.905e^-5	0.122	UPSTREAM CG31606 INTRON CG8552 & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	11347969	3R_11347969_SNP [dm3] 3R_15522247_SNP [dm6]	A	G	3.937e^-5	0.123	INTERGENIC
3R	4570576	3R_4570576_SNP [dm3] 3R_8744854_SNP [dm6]	C	A	3.943e^-5	0.123	INTRON CG9801	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	4865238	3R_4865238_SNP [dm3] 3R_9039516_SNP [dm6]	C	T	3.972e^-5	0.124	UPSTREAM hyx & 1 other INTRON hyx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_run mE1_TFBS_sens mE1_TFBS_Ubx
3R	11347562	3R_11347562_SNP [dm3] 3R_15521840_SNP [dm6]	G	C	3.977e^-5	0.124	INTERGENIC
3L	13864134	3L_13864134_SNP [dm3] 3L_13871034_SNP [dm6]	A	T	3.991e^-5	0.124	UTR_3_PRIME dysc
3R	4783695	3R_4783695_SNP [dm3] 3R_8957973_SNP [dm6]	G	A	4.001e^-5	0.124	INTRON CG11966	TF binding site mE1_TFBS_cad
3R	4784256	3R_4784256_SNP [dm3] 3R_8958534_SNP [dm6]	T	C	4.001e^-5	0.124	INTRON CG11966	TF binding site mE1_TFBS_cad
3L	12843405	3L_12843405_SNP [dm3] 3L_12850305_SNP [dm6]	T	C	4.003e^-5	0.124	SYNONYMOUS_CODING Wbp2 UPSTREAM CG10948	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3R	4253968	3R_4253968_SNP [dm3] 3R_8428246_SNP [dm6]	T	C	4.019e^-5	0.124	INTRON CG45263
3R	13322972	3R_13322972_SNP [dm3] 3R_17497250_SNP [dm6]	C	A	4.039e^-5	0.124	INTRON Dscam3
2R	6491486	2R_6491486_SNP [dm3] 2R_10603981_SNP [dm6]	C	T	4.045e^-5	0.124	INTRON psq	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
X	18231936	X_18231936_INS [dm3] X_18337903_INS [dm6]	A	ACATA	4.049e^-5	0.124	INTRON CG6123
3L	13836240	3L_13836240_SNP [dm3] 3L_13843140_SNP [dm6]	T	A	4.056e^-5	0.124	UPSTREAM CG8757 & 2 others INTERGENIC
3L	17094927	3L_17094927_SNP [dm3] 3L_17101827_SNP [dm6]	G	A	4.059e^-5	0.124	INTRON Rbp6
X	14292636	X_14292636_SNP [dm3] X_14398603_SNP [dm6]	C	A	4.060e^-5	0.124	INTRON dpr8
3R	9037928	3R_9037928_SNP [dm3] 3R_13212206_SNP [dm6]	C	T	4.068e^-5	0.124	INTRON CG8483
3R	10032377	3R_10032377_SNP [dm3] 3R_14206655_SNP [dm6]	A	C	4.074e^-5	0.124	INTRON Dop1R1
X	13808571	X_13808571_SNP [dm3] X_13914538_SNP [dm6]	T	G	4.096e^-5	0.124	INTRON mamo
3L	17558359	3L_17558359_SNP [dm3] 3L_17565259_SNP [dm6]	A	T	4.115e^-5	0.124	DOWNSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_HSA
3L	17558361	3L_17558361_SNP [dm3] 3L_17565261_SNP [dm6]	A	T	4.115e^-5	0.124	DOWNSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_HSA
3L	18009377	3L_18009377_SNP [dm3] 3L_18016277_SNP [dm6]	C	G	4.140e^-5	0.125	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
2L	8390856	2L_8390856_SNP [dm3] 2L_8390856_SNP [dm6]	T	G	4.155e^-5	0.125	SYNONYMOUS_CODING CG42820	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	9224643	2R_9224643_SNP [dm3] 2R_13337138_SNP [dm6]	A	G	4.176e^-5	0.126	EXON CR44206	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens mE1_TFBS_Trl
3L	20066186	3L_20066186_SNP [dm3] 3L_20073086_SNP [dm6]	T	C	4.201e^-5	0.126	INTRON sNPF-R
3R	8140231	3R_8140231_SNP [dm3] 3R_12314509_SNP [dm6]	T	A	4.217e^-5	0.126	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	16819663	3L_16819663_SNP [dm3] 3L_16826563_SNP [dm6]	C	T	4.224e^-5	0.126	INTRON CG13024
2L	11373086	2L_11373086_SNP [dm3] 2L_11373086_SNP [dm6]	C	T	4.244e^-5	0.126	SYNONYMOUS_CODING salr
2L	2835580	2L_2835580_SNP [dm3] 2L_2835580_SNP [dm6]	G	A	4.246e^-5	0.126	DOWNSTREAM CG3119 INTRON CG3119
2L	2835734	2L_2835734_SNP [dm3] 2L_2835734_SNP [dm6]	A	T	4.246e^-5	0.126	DOWNSTREAM CG3119 INTRON CG3119
3R	15105040	3R_15105040_SNP [dm3] 3R_19279318_SNP [dm6]	T	G	4.247e^-5	0.126	SPLICE_SITE_REGION CR44173 EXON CR44173
3L	18357004	3L_18357004_SNP [dm3] 3L_18363904_SNP [dm6]	A	T	4.268e^-5	0.126	INTERGENIC	TF binding site BDTNP1_TFBS_twi
3R	4853912	3R_4853912_SNP [dm3] 3R_9028190_SNP [dm6]	C	T	4.295e^-5	0.126	INTRON neur	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	24466529	3R_24466529_SNP [dm3] 3R_28640807_SNP [dm6]	C	G	4.297e^-5	0.126	DOWNSTREAM CG14062 INTERGENIC	TF binding site mE1_TFBS_cad
2L	1102131	2L_1102131_SNP [dm3] 2L_1102131_SNP [dm6]	A	T	4.319e^-5	0.126	INTRON CG4629
3R	14544922	3R_14544922_SNP [dm3] 3R_18719200_SNP [dm6]	A	G	4.320e^-5	0.126	DOWNSTREAM VAChT INTRON Cha
3R	10151042	3R_10151042_SNP [dm3] 3R_14325320_SNP [dm6]	G	C	4.323e^-5	0.126	NON_SYNONYMOUS_CODING Afti	TF binding site mE1_TFBS_sens
3R	10151114	3R_10151114_SNP [dm3] 3R_14325392_SNP [dm6]	A	T	4.323e^-5	0.126	NON_SYNONYMOUS_CODING Afti	TF binding site mE1_TFBS_sens
3R	10153287	3R_10153287_SNP [dm3] 3R_14327565_SNP [dm6]	C	T	4.323e^-5	0.126	UTR_3_PRIME CG3321 UPSTREAM Afti & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Ubx
3R	5138623	3R_5138623_SNP [dm3] 3R_9312901_SNP [dm6]	G	A	4.323e^-5	0.126	INTRON CG8861	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	5140438	3R_5140438_SNP [dm3] 3R_9314716_SNP [dm6]	A	T	4.323e^-5	0.126	INTRON CG8861
3R	8209556	3R_8209556_DEL [dm3] 3R_12383834_DEL [dm6]	ACAAA	A	4.323e^-5	0.126	UPSTREAM GstD11 INTRON GstD11	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3R	8353659	3R_8353659_SNP [dm3] 3R_12527937_SNP [dm6]	C	A	4.323e^-5	0.126	NON_SYNONYMOUS_CODING Hug INTRON Octbeta3R
3R	9810751	3R_9810751_SNP [dm3] 3R_13985029_SNP [dm6]	C	G	4.323e^-5	0.126	INTRON rdx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
X	14896644	X_14896644_SNP [dm3] X_15002611_SNP [dm6]	G	A	4.327e^-5	0.126	INTRON eag
3R	4669198	3R_4669198_SNP [dm3] 3R_8843476_SNP [dm6]	G	C	4.331e^-5	0.126	INTRON pyd	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	4864146	3R_4864146_SNP [dm3] 3R_9038424_SNP [dm6]	G	T	4.348e^-5	0.126	UPSTREAM hyx INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3L	17558386	3L_17558386_SNP [dm3] 3L_17565286_SNP [dm6]	A	T	4.350e^-5	0.126	DOWNSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_HSA
3L	13850703	3L_13850703_SNP [dm3] 3L_13857603_SNP [dm6]	G	A	4.361e^-5	0.126	NON_SYNONYMOUS_CODING Hml	TF binding site mE1_TFBS_cad
3L	17558364	3L_17558364_SNP [dm3] 3L_17565264_SNP [dm6]	G	T	4.399e^-5	0.126	DOWNSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_HSA
3R	8896617	3R_8896617_DEL [dm3] 3R_13070895_DEL [dm6]	TT	T	4.404e^-5	0.126	INTRON sim	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	18009385	3L_18009385_SNP [dm3] 3L_18016285_SNP [dm6]	C	T	4.404e^-5	0.126	INTRON Eip75B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3L	13869142	3L_13869142_SNP [dm3] 3L_13876042_SNP [dm6]	C	A	4.412e^-5	0.126	INTRON dysc
2L	19833135	2L_19833135_SNP [dm3] 2L_19833135_SNP [dm6]	A	G	4.412e^-5	0.126	INTRON sick
2R	17820288	2R_17820288_DEL [dm3] 2R_21932783_DEL [dm6]	CTGTGCAAACTCGAAATATT...	C	4.447e^-5	0.126	INTRON Fili
2L	19833075	2L_19833075_SNP [dm3] 2L_19833075_SNP [dm6]	A	C	4.448e^-5	0.126	INTRON sick
2L	19833096	2L_19833096_SNP [dm3] 2L_19833096_SNP [dm6]	T	C	4.448e^-5	0.126	INTRON sick
3R	5882047	3R_5882047_SNP [dm3] 3R_10056325_SNP [dm6]	T	C	4.450e^-5	0.126	UPSTREAM Npc2d INTERGENIC	TF binding site BDTNP1_TFBS_twi
3L	12022217	3L_12022217_SNP [dm3] 3L_12029117_SNP [dm6]	T	G	4.456e^-5	0.126	DOWNSTREAM CR43994 INTRON rols	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3R	4032163	3R_4032163_SNP [dm3] 3R_8206441_SNP [dm6]	C	T	4.469e^-5	0.126	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	15863952	3L_15863952_SNP [dm3] 3L_15870852_SNP [dm6]	C	T	4.475e^-5	0.126	INTRON pHCl	TF binding site mE1_TFBS_cad
2R	17614454	2R_17614454_SNP [dm3] 2R_21726949_SNP [dm6]	T	A	4.477e^-5	0.126	DOWNSTREAM CR44750 INTERGENIC
3R	15101018	3R_15101018_SNP [dm3] 3R_19275296_SNP [dm6]	A	G	4.492e^-5	0.126	INTERGENIC
3R	5900631	3R_5900631_SNP [dm3] 3R_10074909_SNP [dm6]	G	A	4.509e^-5	0.126	NON_SYNONYMOUS_CODING CG5361	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	5913405	3R_5913405_SNP [dm3] 3R_10087683_SNP [dm6]	C	G	4.509e^-5	0.126	INTRON CR45054	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Trl
3R	5968261	3R_5968261_SNP [dm3] 3R_10142539_SNP [dm6]	G	A	4.517e^-5	0.126	SYNONYMOUS_CODING TAF1B UPSTREAM CG42759
3R	5999861	3R_5999861_SNP [dm3] 3R_10174139_SNP [dm6]	G	A	4.517e^-5	0.126	INTRON CG12814
3R	6255180	3R_6255180_SNP [dm3] 3R_10429458_SNP [dm6]	C	T	4.517e^-5	0.126	INTERGENIC
3R	6270025	3R_6270025_SNP [dm3] 3R_10444303_SNP [dm6]	T	C	4.523e^-5	0.126	INTERGENIC
3R	8895750	3R_8895750_SNP [dm3] 3R_13070028_SNP [dm6]	C	A	4.526e^-5	0.126	INTRON sim	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	4782601	3R_4782601_SNP [dm3] 3R_8956879_SNP [dm6]	A	T	4.529e^-5	0.126	INTRON CG11966	TF binding site BDTNP1_TFBS_twi
3L	1490386	3L_1490386_DEL [dm3] 3L_1490386_DEL [dm6]	CACACGATTTTTTGGC...	C	4.532e^-5	0.126	UPSTREAM stet DOWNSTREAM CG12084 INTERGENIC	TF binding site mE1_TFBS_sbb transposable element FlyBase
3R	4862576	3R_4862576_SNP [dm3] 3R_9036854_SNP [dm6]	A	C	4.534e^-5	0.126	INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	13275344	3R_13275344_SNP [dm3] 3R_17449622_SNP [dm6]	A	G	4.537e^-5	0.126	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3R	15551730	3R_15551730_SNP [dm3] 3R_19726008_SNP [dm6]	C	A	4.550e^-5	0.126	INTERGENIC
2L	4110394	2L_4110394_SNP [dm3] 2L_4110394_SNP [dm6]	A	T	4.563e^-5	0.126	INTRON ed
2L	13720745	2L_13720745_SNP [dm3] 2L_13720745_SNP [dm6]	A	G	4.570e^-5	0.126	INTERGENIC
2L	13720751	2L_13720751_SNP [dm3] 2L_13720751_SNP [dm6]	A	G	4.570e^-5	0.126	INTERGENIC
2L	10709974	2L_10709974_DEL [dm3] 2L_10709974_DEL [dm6]	AAATTGA	A	4.571e^-5	0.126	UPSTREAM CR44407 & 1 other INTERGENIC
3R	10256875	3R_10256875_SNP [dm3] 3R_14431153_SNP [dm6]	T	C	4.575e^-5	0.126	INTRON cv-c
3R	5112716	3R_5112716_SNP [dm3] 3R_9286994_SNP [dm6]	T	G	4.575e^-5	0.126	INTERGENIC
3R	5160363	3R_5160363_SNP [dm3] 3R_9334641_SNP [dm6]	T	A	4.575e^-5	0.126	UTR_5_PRIME CG8866 UPSTREAM CG8121	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_D mE1_TFBS_disco mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3R	8026722	3R_8026722_SNP [dm3] 3R_12201000_SNP [dm6]	G	A	4.575e^-5	0.126	INTERGENIC
3R	9904321	3R_9904321_SNP [dm3] 3R_14078599_SNP [dm6]	G	T	4.575e^-5	0.126	INTRON foxo
3R	14748955	3R_14748955_SNP [dm3] 3R_18923233_SNP [dm6]	C	T	4.591e^-5	0.126	UPSTREAM Xrp1 INTRON Xrp1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_zfh1
3L	14499866	3L_14499866_SNP [dm3] 3L_14506766_SNP [dm6]	A	C	4.604e^-5	0.126	INTRON bbg
3R	8401138	3R_8401138_SNP [dm3] 3R_12575416_SNP [dm6]	T	A	4.642e^-5	0.127	INTRON Octbeta2R
3R	8895745	3R_8895745_SNP [dm3] 3R_13070023_SNP [dm6]	A	C	4.649e^-5	0.127	INTRON sim	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	9448808	2L_9448808_SNP [dm3] 2L_9448808_SNP [dm6]	C	G	4.649e^-5	0.127	INTRON numb	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_jumu mE1_TFBS_kn mE1_TFBS_Stat92E mE1_TFBS_Trl
2L	11834683	2L_11834683_SNP [dm3] 2L_11834683_SNP [dm6]	G	A	4.664e^-5	0.127	SYNONYMOUS_CODING CG45012 UPSTREAM CR45013 DOWNSTREAM CG45011 INTRON Pde1c
3R	10018064	3R_10018064_SNP [dm3] 3R_14192342_SNP [dm6]	C	T	4.672e^-5	0.127	INTRON Dop1R1
X	19351002	X_19351002_SNP [dm3] X_19456969_SNP [dm6]	A	T	4.688e^-5	0.127	INTRON kek5
3R	4765616	3R_4765616_SNP [dm3] 3R_8939894_SNP [dm6]	C	T	4.710e^-5	0.128	INTRON skap
3L	21435142	3L_21435142_INS [dm3] 3L_21442042_INS [dm6]	A	AT	4.716e^-5	0.128	UPSTREAM CG5664 DOWNSTREAM CG5656 INTERGENIC	transposable element FlyBase
X	9641795	X_9641795_SNP [dm3] X_9747762_SNP [dm6]	C	A	4.734e^-5	0.128	INTRON Sp1	TF binding site BDTNP1_TFBS_dl
X	14111668	X_14111668_DEL [dm3] X_14217635_DEL [dm6]	AGAA	A	4.739e^-5	0.128	INTRON l_1_G0007
3R	6259266	3R_6259266_SNP [dm3] 3R_10433544_SNP [dm6]	C	T	4.772e^-5	0.128	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	16819587	3L_16819587_SNP [dm3] 3L_16826487_SNP [dm6]	A	T	4.780e^-5	0.129	INTRON CG13024
3R	15105030	3R_15105030_SNP [dm3] 3R_19279308_SNP [dm6]	T	G	4.801e^-5	0.129	INTRON CR44173
3L	13051231	3L_13051231_SNP [dm3] 3L_13058131_SNP [dm6]	A	C	4.820e^-5	0.129	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_zfh1
3L	13120564	3L_13120564_SNP [dm3] 3L_13127464_SNP [dm6]	C	T	4.820e^-5	0.129	INTERGENIC
3R	5442464	3R_5442464_SNP [dm3] 3R_9616742_SNP [dm6]	G	A	4.832e^-5	0.129	INTRON CG8312
X	14955994	X_14955994_SNP [dm3] X_15061961_SNP [dm6]	T	A	4.844e^-5	0.129	INTRON hiw
3L	14516660	3L_14516660_SNP [dm3] 3L_14523560_SNP [dm6]	G	T	4.881e^-5	0.13	INTRON bbg	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_Trl
2R	6524674	2R_6524674_SNP [dm3] 2R_10637169_SNP [dm6]	A	G	4.881e^-5	0.13	INTRON CG11883
2R	17468009	2R_17468009_SNP [dm3] 2R_21580504_SNP [dm6]	C	T	4.896e^-5	0.13	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	8140211	3R_8140211_SNP [dm3] 3R_12314489_SNP [dm6]	T	C	4.908e^-5	0.13	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	8899649	3R_8899649_SNP [dm3] 3R_13073927_SNP [dm6]	C	T	4.918e^-5	0.13	INTRON sim	TF binding site BDTNP1_TFBS_dl
X	16073320	X_16073320_SNP [dm3] X_16179287_SNP [dm6]	C	A	4.923e^-5	0.13	INTERGENIC	TF binding site mE1_TFBS_sens
X	14298280	X_14298280_DEL [dm3] X_14404247_DEL [dm6]	AATGCGCCC	A	4.929e^-5	0.13	INTRON dpr8
X	13576447	X_13576447_SNP [dm3] X_13682414_SNP [dm6]	C	T	4.950e^-5	0.13	UPSTREAM CG11158 INTERGENIC
3L	13185039	3L_13185039_SNP [dm3] 3L_13191939_SNP [dm6]	C	A	4.961e^-5	0.13	INTERGENIC
3L	13185359	3L_13185359_SNP [dm3] 3L_13192259_SNP [dm6]	T	G	4.961e^-5	0.13	INTERGENIC	TF binding site mE1_TFBS_cad
3L	13185360	3L_13185360_SNP [dm3] 3L_13192260_SNP [dm6]	A	T	4.961e^-5	0.13	INTERGENIC	TF binding site mE1_TFBS_cad
X	15997076	X_15997076_INS [dm3] X_16103043_INS [dm6]	T	TT	4.962e^-5	0.13	UTR_5_PRIME CG42353 & 1 other INTRON CG42354 & 1 other	TF binding site BDTNP1_TFBS_dl
3R	8357264	3R_8357264_SNP [dm3] 3R_12531542_SNP [dm6]	C	T	4.985e^-5	0.13	INTRON Octbeta3R
3L	20573939	3L_20573939_SNP [dm3] 3L_20580839_SNP [dm6]	T	G	4.991e^-5	0.13	INTERGENIC
3R	8235993	3R_8235993_SNP [dm3] 3R_12410271_SNP [dm6]	T	G	4.992e^-5	0.13	SPLICE_SITE_REGION CG5196 INTRON CG5196	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA
2R	17765086	2R_17765086_SNP [dm3] 2R_21877581_SNP [dm6]	C	T	4.999e^-5	0.13	INTRON Fili	TF binding site mE1_TFBS_cnc
X	19351037	X_19351037_SNP [dm3] X_19457004_SNP [dm6]	A	C	5.011e^-5	0.13	INTRON kek5
3R	6303095	3R_6303095_SNP [dm3] 3R_10477373_SNP [dm6]	C	A	5.023e^-5	0.13	INTERGENIC
3R	6303116	3R_6303116_SNP [dm3] 3R_10477394_SNP [dm6]	C	T	5.023e^-5	0.13	INTERGENIC
3L	13185057	3L_13185057_SNP [dm3] 3L_13191957_SNP [dm6]	G	T	5.024e^-5	0.13	INTERGENIC
3R	8140235	3R_8140235_SNP [dm3] 3R_12314513_SNP [dm6]	T	C	5.028e^-5	0.13	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	20401925	3L_20401925_SNP [dm3] 3L_20408825_SNP [dm6]	G	A	5.037e^-5	0.13	SYNONYMOUS_CODING CG13248	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	20401961	3L_20401961_SNP [dm3] 3L_20408861_SNP [dm6]	C	T	5.037e^-5	0.13	SYNONYMOUS_CODING CG13248	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3L	14508369	3L_14508369_SNP [dm3] 3L_14515269_SNP [dm6]	G	T	5.053e^-5	0.13	INTRON bbg
3R	6810264	3R_6810264_SNP [dm3] 3R_10984542_SNP [dm6]	T	G	5.062e^-5	0.13	INTRON CG34114
2L	11362633	2L_11362633_SNP [dm3] 2L_11362633_SNP [dm6]	T	G	5.076e^-5	0.13	INTRON salr	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	9902127	3R_9902127_SNP [dm3] 3R_14076405_SNP [dm6]	A	G	5.089e^-5	0.13	INTRON foxo
X	17932872	X_17932872_SNP [dm3] X_18038839_SNP [dm6]	C	T	5.092e^-5	0.13	INTRON Sh
3R	7145231	3R_7145231_DEL [dm3] 3R_11319509_DEL [dm6]	AT	A	5.095e^-5	0.13	INTERGENIC
3R	7145234	3R_7145234_SNP [dm3] 3R_11319512_SNP [dm6]	C	G	5.095e^-5	0.13	INTERGENIC
2L	16524503	2L_16524503_SNP [dm3] 2L_16524503_SNP [dm6]	A	T	5.124e^-5	0.131	INTRON CG5953
X	5254001	X_5254001_SNP [dm3] X_5359968_SNP [dm6]	A	T	5.124e^-5	0.131	INTRON SK
3L	11930766	3L_11930766_SNP [dm3] 3L_11937666_SNP [dm6]	C	T	5.124e^-5	0.131	SYNONYMOUS_CODING CG44837	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	6118068	2L_6118068_SNP [dm3] 2L_6118068_SNP [dm6]	A	T	5.130e^-5	0.131	UPSTREAM CG31642 INTRON stai
3R	4249440	3R_4249440_SNP [dm3] 3R_8423718_SNP [dm6]	A	T	5.150e^-5	0.131	INTRON CG45263
3L	7550200	3L_7550200_SNP [dm3] 3L_7557100_SNP [dm6]	C	T	5.209e^-5	0.132	NON_SYNONYMOUS_CODING CG14837
3R	10975710	3R_10975710_SNP [dm3] 3R_15149988_SNP [dm6]	A	G	5.227e^-5	0.132	UPSTREAM Gyc88E INTERGENIC
3L	5891125	3L_5891125_SNP [dm3] 3L_5898025_SNP [dm6]	T	C	5.229e^-5	0.132	SYNONYMOUS_CODING CG5592 UPSTREAM Pole2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	5891129	3L_5891129_SNP [dm3] 3L_5898029_SNP [dm6]	G	C	5.229e^-5	0.132	NON_SYNONYMOUS_CODING CG5592 UPSTREAM Pole2	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3R	15551665	3R_15551665_SNP [dm3] 3R_19725943_SNP [dm6]	T	C	5.245e^-5	0.132	INTERGENIC
3R	5112700	3R_5112700_SNP [dm3] 3R_9286978_SNP [dm6]	C	G	5.245e^-5	0.132	INTERGENIC
3R	5324292	3R_5324292_SNP [dm3] 3R_9498570_SNP [dm6]	T	C	5.245e^-5	0.132	UPSTREAM RhoL INTRON RhoL	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi
3R	8357364	3R_8357364_SNP [dm3] 3R_12531642_SNP [dm6]	T	A	5.245e^-5	0.132	INTRON Octbeta3R
3L	14818158	3L_14818158_SNP [dm3] 3L_14825058_SNP [dm6]	A	T	5.250e^-5	0.132	INTRON CG17839
3L	14501533	3L_14501533_SNP [dm3] 3L_14508433_SNP [dm6]	T	C	5.251e^-5	0.132	NON_SYNONYMOUS_CODING bbg	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	16653424	2L_16653424_SNP [dm3] 2L_16653424_SNP [dm6]	C	G	5.255e^-5	0.132	INTRON CG42389	TF binding site mE1_TFBS_inv
2L	2835571	2L_2835571_SNP [dm3] 2L_2835571_SNP [dm6]	T	G	5.264e^-5	0.132	DOWNSTREAM CG3119 INTRON CG3119
2L	8796795	2L_8796795_SNP [dm3] 2L_8796795_SNP [dm6]	T	C	5.279e^-5	0.132	INTERGENIC	TF binding site mE1_TFBS_sens
3L	13860281	3L_13860281_SNP [dm3] 3L_13867181_SNP [dm6]	A	C	5.283e^-5	0.132	UPSTREAM CG8745 DOWNSTREAM dysc INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	16772989	X_16772989_SNP [dm3] X_16878956_SNP [dm6]	G	C	5.288e^-5	0.132	INTERGENIC
3R	4709874	3R_4709874_SNP [dm3] 3R_8884152_SNP [dm6]	G	A	5.302e^-5	0.132	INTRON pyd	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
2L	19833079	2L_19833079_SNP [dm3] 2L_19833079_SNP [dm6]	A	G	5.308e^-5	0.132	INTRON sick
2L	19833083	2L_19833083_SNP [dm3] 2L_19833083_SNP [dm6]	T	C	5.308e^-5	0.132	INTRON sick
3L	22688791	3L_22688791_SNP [dm3] 3L_22695691_SNP [dm6]	C	G	5.318e^-5	0.132	UPSTREAM CG14452 INTERGENIC	transposable element FlyBase
X	12517223	X_12517223_DEL [dm3] X_12623190_DEL [dm6]	AA	A	5.333e^-5	0.132	DOWNSTREAM CR44568 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	16038145	3R_16038145_SNP [dm3] 3R_20212423_SNP [dm6]	C	T	5.334e^-5	0.132	INTRON Nlg4
2R	1992860	2R_1992860_SNP [dm3] 2R_6105355_SNP [dm6]	G	A	5.339e^-5	0.132	INTRON EcR	TF binding site BDTNP1_TFBS_twi
2L	7644141	2L_7644141_SNP [dm3] 2L_7644141_SNP [dm6]	C	T	5.365e^-5	0.132	NON_SYNONYMOUS_CODING Slob UTR_3_PRIME Slob
2L	17237785	2L_17237785_SNP [dm3] 2L_17237785_SNP [dm6]	G	C	5.366e^-5	0.132	INTRON beat-IIIc	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3R	4854672	3R_4854672_SNP [dm3] 3R_9028950_SNP [dm6]	T	A	5.375e^-5	0.132	INTRON neur	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl mE1_TFBS_Ubx
3R	11347732	3R_11347732_SNP [dm3] 3R_15522010_SNP [dm6]	G	A	5.381e^-5	0.132	INTERGENIC
2L	2668495	2L_2668495_SNP [dm3] 2L_2668495_SNP [dm6]	C	T	5.405e^-5	0.132	INTERGENIC
3R	9862721	3R_9862721_SNP [dm3] 3R_14036999_SNP [dm6]	A	G	5.434e^-5	0.133	UPSTREAM CG9922 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	4800441	3R_4800441_INS [dm3] 3R_8974719_INS [dm6]	C	TCAGAACA	5.434e^-5	0.133	INTERGENIC
2R	10485914	2R_10485914_SNP [dm3] 2R_14598409_SNP [dm6]	G	T	5.446e^-5	0.133	SYNONYMOUS_CODING RpI1
3L	17558424	3L_17558424_SNP [dm3] 3L_17565324_SNP [dm6]	A	G	5.469e^-5	0.133	DOWNSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_HSA
3R	8234140	3R_8234140_SNP [dm3] 3R_12408418_SNP [dm6]	C	G	5.470e^-5	0.133	NON_SYNONYMOUS_CODING CG5196 UPSTREAM CG5196 DOWNSTREAM CG5167	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_cad
3R	8235851	3R_8235851_SNP [dm3] 3R_12410129_SNP [dm6]	A	G	5.470e^-5	0.133	INTRON CG5196	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
2L	13720735	2L_13720735_INS [dm3] 2L_13720735_INS [dm6]	A	AAA	5.474e^-5	0.133	INTERGENIC
3R	13256612	3R_13256612_SNP [dm3] 3R_17430890_SNP [dm6]	C	T	5.489e^-5	0.133	INTRON CG5873
3R	8380183	3R_8380183_SNP [dm3] 3R_12554461_SNP [dm6]	C	T	5.533e^-5	0.134	SYNONYMOUS_CODING Octbeta2R
3L	20404403	3L_20404403_SNP [dm3] 3L_20411303_SNP [dm6]	T	A	5.534e^-5	0.134	UPSTREAM CG13248 INTERGENIC
3R	15953189	3R_15953189_SNP [dm3] 3R_20127467_SNP [dm6]	C	G	5.608e^-5	0.135	INTERGENIC
3R	15814199	3R_15814199_SNP [dm3] 3R_19988477_SNP [dm6]	C	T	5.608e^-5	0.135	INTRON Hs6st	TF binding site BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10115288	3R_10115288_INS [dm3] 3R_14289566_INS [dm6]	G	GCT	5.629e^-5	0.135	UPSTREAM CG12207 DOWNSTREAM CR45596 INTRON CG12207
3R	8196076	3R_8196076_SNP [dm3] 3R_12370354_SNP [dm6]	A	C	5.629e^-5	0.135	INTERGENIC	TF binding site mE1_TFBS_Trl
3R	10271429	3R_10271429_SNP [dm3] 3R_14445707_SNP [dm6]	A	T	5.630e^-5	0.135	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	12417256	2L_12417256_SNP [dm3] 2L_12417256_SNP [dm6]	C	A	5.638e^-5	0.135	INTRON vir-1
2R	19993383	2R_19993383_SNP [dm3] 2R_24105860_SNP [dm6]	C	T	5.649e^-5	0.135	NON_SYNONYMOUS_CODING enok	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	12734885	3R_12734885_SNP [dm3] 3R_16909163_SNP [dm6]	C	T	5.650e^-5	0.135	INTRON iab-8	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3R	8224915	3R_8224915_SNP [dm3] 3R_12399193_SNP [dm6]	A	T	5.659e^-5	0.135	SYNONYMOUS_CODING lig3 UPSTREAM Cyp9f3Psi INTRON CG34402	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	5786538	3R_5786538_SNP [dm3] 3R_9960816_SNP [dm6]	G	A	5.670e^-5	0.135	INTRON Glut4EF	TF binding site mE1_TFBS_HSA
2R	18080405	2R_18080405_DEL [dm3] 2R_22192900_DEL [dm6]	AGCCACAGA	A	5.724e^-5	0.137	INTRON Swim
2R	11693784	2R_11693784_SNP [dm3] 2R_15806279_SNP [dm6]	G	C	5.732e^-5	0.137	INTRON tun & 1 other
3L	12843526	3L_12843526_DEL [dm3] 3L_12850426_DEL [dm6]	AA	A	5.803e^-5	0.138	UPSTREAM CG10948 INTRON Wbp2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
2R	13563047	2R_13563047_SNP [dm3] 2R_17675542_SNP [dm6]	T	C	5.804e^-5	0.138	SYNONYMOUS_CODING Sema-1b	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	10864005	2R_10864005_SNP [dm3] 2R_14976500_SNP [dm6]	C	T	5.837e^-5	0.138	INTRON ckn	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi
3L	16481114	3L_16481114_DEL [dm3] 3L_16488014_DEL [dm6]	TT	T	5.840e^-5	0.138	INTRON CG33158	TF binding site BDTNP1_TFBS_dl
3L	18330786	3L_18330786_SNP [dm3] 3L_18337686_SNP [dm6]	C	G	5.846e^-5	0.138	INTERGENIC
3R	5892612	3R_5892612_SNP [dm3] 3R_10066890_SNP [dm6]	T	G	5.876e^-5	0.139	NON_SYNONYMOUS_CODING CG33783
2L	10452608	2L_10452608_INS [dm3] 2L_10452608_INS [dm6]	C	TGGA	5.878e^-5	0.139	UPSTREAM ppk10 DOWNSTREAM CG5322 INTERGENIC
3R	18480943	3R_18480943_SNP [dm3] 3R_22655221_SNP [dm6]	T	G	5.881e^-5	0.139	INTRON CG45058
X	10830109	X_10830109_SNP [dm3] X_10936076_SNP [dm6]	T	A	5.902e^-5	0.139	INTRON Myo10A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10119599	3R_10119599_INS [dm3] 3R_14293877_INS [dm6]	C	CTGTTACTCTCTAC...	5.930e^-5	0.139	INTRON CG12207
3R	10119602	3R_10119602_SNP [dm3] 3R_14293880_SNP [dm6]	T	A	5.930e^-5	0.139	INTRON CG12207
3R	4439626	3R_4439626_SNP [dm3] 3R_8613904_SNP [dm6]	G	T	5.930e^-5	0.139	INTRON 5-HT2B	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
3L	157864	3L_157864_SNP [dm3] 3L_157864_SNP [dm6]	G	T	5.979e^-5	0.139	INTRON p130CAS EXON CR43151	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	166495	3L_166495_SNP [dm3] 3L_166495_SNP [dm6]	A	G	5.979e^-5	0.139	INTRON p130CAS
3L	176180	3L_176180_SNP [dm3] 3L_176180_SNP [dm6]	G	A	5.979e^-5	0.139	SYNONYMOUS_CODING CG7049 DOWNSTREAM Vdup1	TF binding site BDTNP1_TFBS_dl
3L	181876	3L_181876_SNP [dm3] 3L_181876_SNP [dm6]	G	A	5.979e^-5	0.139	SYNONYMOUS_CODING CG13875 DOWNSTREAM CG34140 & 1 other	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	15112128	X_15112128_SNP [dm3] X_15218095_SNP [dm6]	T	G	5.984e^-5	0.139	INTERGENIC
X	15546090	X_15546090_SNP [dm3] X_15652057_SNP [dm6]	A	G	5.984e^-5	0.139	INTERGENIC
3L	526220	3L_526220_SNP [dm3] 3L_526220_SNP [dm6]	T	A	6.004e^-5	0.139	INTRON klar
3L	526284	3L_526284_SNP [dm3] 3L_526284_SNP [dm6]	A	C	6.004e^-5	0.139	UPSTREAM CR45118 INTRON klar
3R	15101032	3R_15101032_DEL [dm3] 3R_19275310_DEL [dm6]	TGTGTAAAATATGGA...	T	6.038e^-5	0.14	INTERGENIC
3R	8240575	3R_8240575_SNP [dm3] 3R_12414853_SNP [dm6]	T	C	6.082e^-5	0.141	INTRON pps	TF binding site mE1_TFBS_sens
2L	22055452	2L_22055452_SNP [dm3] 2L_22055452_SNP [dm6]	A	C	6.088e^-5	0.141	INTERGENIC
4	900325	4_900325_DEL [dm3] 4_879699_DEL [dm6]	AACTATATAACATA...	A	6.120e^-5	0.141	INTRON unc-13 EXON CR44029	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6310129	2L_6310129_SNP [dm3] 2L_6310129_SNP [dm6]	A	T	6.147e^-5	0.141	DOWNSTREAM CG13984 INTRON Ddr
2L	19790657	2L_19790657_SNP [dm3] 2L_19790657_SNP [dm6]	C	T	6.180e^-5	0.141	INTRON CdGAPr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	19790723	2L_19790723_SNP [dm3] 2L_19790723_SNP [dm6]	G	C	6.180e^-5	0.141	INTRON CdGAPr	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	13278402	3R_13278402_SNP [dm3] 3R_17452680_SNP [dm6]	A	C	6.194e^-5	0.141	INTERGENIC
3R	8236367	3R_8236367_SNP [dm3] 3R_12410645_SNP [dm6]	T	C	6.197e^-5	0.141	SYNONYMOUS_CODING CG5196	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	14266228	2R_14266228_SNP [dm3] 2R_18378723_SNP [dm6]	C	T	6.213e^-5	0.141	DOWNSTREAM CR42736 INTERGENIC	TF binding site mE1_TFBS_cad
2R	14290001	2R_14290001_SNP [dm3] 2R_18402496_SNP [dm6]	C	T	6.213e^-5	0.141	UPSTREAM GstE4 DOWNSTREAM CR43687 EXON CR43688	TF binding site mE1_TFBS_Trl
2R	17623937	2R_17623937_SNP [dm3] 2R_21736432_SNP [dm6]	A	T	6.213e^-5	0.141	INTERGENIC
2R	17635889	2R_17635889_SNP [dm3] 2R_21748384_SNP [dm6]	C	T	6.213e^-5	0.141	INTERGENIC
X	10867011	X_10867011_SNP [dm3] X_10972978_SNP [dm6]	A	G	6.213e^-5	0.141	INTRON CG42339
X	10867075	X_10867075_SNP [dm3] X_10973042_SNP [dm6]	A	G	6.213e^-5	0.141	INTRON CG42339
X	10867199	X_10867199_SNP [dm3] X_10973166_SNP [dm6]	T	C	6.213e^-5	0.141	INTRON CG42339
X	16150714	X_16150714_SNP [dm3] X_16256681_SNP [dm6]	A	G	6.213e^-5	0.141	INTERGENIC
X	2156588	X_2156588_SNP [dm3] X_2262555_SNP [dm6]	T	C	6.213e^-5	0.141	UPSTREAM CG3071 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
X	2157651	X_2157651_SNP [dm3] X_2263618_SNP [dm6]	C	T	6.213e^-5	0.141	NON_SYNONYMOUS_CODING CG3071	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_sens
X	8577753	X_8577753_SNP [dm3] X_8683720_SNP [dm6]	G	A	6.213e^-5	0.141	INTRON CG11284
2R	11446483	2R_11446483_SNP [dm3] 2R_15558978_SNP [dm6]	G	T	6.214e^-5	0.141	UPSTREAM CG12963 INTRON CG12963	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
4	849482	4_849482_SNP [dm3] 4_828856_SNP [dm6]	T	A	6.234e^-5	0.141	INTRON Sox102F	TF binding site BDTNP1_TFBS_twi
3R	2516927	3R_2516927_SNP [dm3] 3R_6691205_SNP [dm6]	T	A	6.246e^-5	0.141	SYNONYMOUS_CODING Ccp84Ae UPSTREAM Ccp84Af
3R	4890630	3R_4890630_SNP [dm3] 3R_9064908_SNP [dm6]	C	G	6.249e^-5	0.141	NON_SYNONYMOUS_CODING beag UPSTREAM Ada	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2L	17368556	2L_17368556_SNP [dm3] 2L_17368556_SNP [dm6]	T	G	6.251e^-5	0.141	DOWNSTREAM Lrch INTRON Lrch	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3R	5473945	3R_5473945_SNP [dm3] 3R_9648223_SNP [dm6]	C	T	6.265e^-5	0.141	INTRON Dh44
3L	20074170	3L_20074170_SNP [dm3] 3L_20081070_SNP [dm6]	A	T	6.266e^-5	0.141	INTRON sNPF-R
2R	7406564	2R_7406564_SNP [dm3] 2R_11519059_SNP [dm6]	T	G	6.270e^-5	0.141	INTERGENIC
3R	6708245	3R_6708245_SNP [dm3] 3R_10882523_SNP [dm6]	A	G	6.296e^-5	0.141	UTR_3_PRIME CG14696 UPSTREAM Tpc1	TF binding site mE1_TFBS_Ubx
3R	4955320	3R_4955320_SNP [dm3] 3R_9129598_SNP [dm6]	A	G	6.322e^-5	0.141	INTRON pum
2L	6753953	2L_6753953_SNP [dm3] 2L_6753953_SNP [dm6]	C	T	6.343e^-5	0.141	SYNONYMOUS_CODING CG11221	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	5783874	3R_5783874_SNP [dm3] 3R_9958152_SNP [dm6]	C	A	6.345e^-5	0.141	INTRON Glut4EF
3R	25431144	3R_25431144_INS [dm3] 3R_29605422_INS [dm6]	G	GTG	6.371e^-5	0.141	INTRON alph
X	10830776	X_10830776_SNP [dm3] X_10936743_SNP [dm6]	A	T	6.372e^-5	0.141	INTRON Myo10A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	10832811	X_10832811_SNP [dm3] X_10938778_SNP [dm6]	A	C	6.372e^-5	0.141	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10833220	X_10833220_SNP [dm3] X_10939187_SNP [dm6]	G	T	6.372e^-5	0.141	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10833367	X_10833367_SNP [dm3] X_10939334_SNP [dm6]	A	C	6.372e^-5	0.141	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10833484	X_10833484_DEL [dm3] X_10939451_DEL [dm6]	TTAGAAAAACATGGCATGAA...	GTAAAATT	6.372e^-5	0.141	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10833615	X_10833615_SNP [dm3] X_10939582_SNP [dm6]	A	G	6.372e^-5	0.141	INTRON Myo10A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17426694	2R_17426694_SNP [dm3] 2R_21539189_SNP [dm6]	A	G	6.376e^-5	0.141	SYNONYMOUS_CODING CG33226 DOWNSTREAM CG30283 INTRON Egfr	TF binding site BDTNP1_TFBS_twi
3R	3020483	3R_3020483_SNP [dm3] 3R_7194761_SNP [dm6]	T	C	6.385e^-5	0.141	UTR_3_PRIME lap INTRON lap	TF binding site BDTNP1_TFBS_dl
X	18913456	X_18913456_SNP [dm3] X_19019423_SNP [dm6]	T	A	6.395e^-5	0.141	INTRON CG43759
3L	13121727	3L_13121727_SNP [dm3] 3L_13128627_SNP [dm6]	T	A	6.419e^-5	0.141	INTERGENIC
2L	6118069	2L_6118069_SNP [dm3] 2L_6118069_SNP [dm6]	A	G	6.423e^-5	0.141	UPSTREAM CG31642 INTRON stai
3R	13314929	3R_13314929_SNP [dm3] 3R_17489207_SNP [dm6]	A	T	6.436e^-5	0.141	INTRON Dscam3
3R	13314931	3R_13314931_SNP [dm3] 3R_17489209_SNP [dm6]	G	A	6.436e^-5	0.141	INTRON Dscam3
3R	9745534	3R_9745534_SNP [dm3] 3R_13919812_SNP [dm6]	G	A	6.454e^-5	0.141	INTERGENIC
3L	15486719	3L_15486719_SNP [dm3] 3L_15493619_SNP [dm6]	A	T	6.463e^-5	0.141	INTRON CG12355	TF binding site mE1_TFBS_Trl
3L	13819457	3L_13819457_SNP [dm3] 3L_13826357_SNP [dm6]	G	A	6.490e^-5	0.141	INTERGENIC
3L	13822128	3L_13822128_SNP [dm3] 3L_13829028_SNP [dm6]	C	G	6.490e^-5	0.141	INTERGENIC
3L	13830001	3L_13830001_SNP [dm3] 3L_13836901_SNP [dm6]	T	C	6.490e^-5	0.141	UPSTREAM CG43184 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	15883476	3L_15883476_SNP [dm3] 3L_15890376_SNP [dm6]	C	T	6.506e^-5	0.141	INTRON pHCl
2L	20378754	2L_20378754_SNP [dm3] 2L_20378754_SNP [dm6]	G	T	6.520e^-5	0.141	INTRON CG16798	TF binding site mE1_TFBS_cad
2L	4108538	2L_4108538_SNP [dm3] 2L_4108538_SNP [dm6]	A	G	6.520e^-5	0.141	INTRON ed
3R	4755611	3R_4755611_DEL [dm3] 3R_8929889_DEL [dm6]	AAA	A	6.535e^-5	0.141	INTRON pyd
2L	7805809	2L_7805809_INS [dm3] 2L_7805809_INS [dm6]	T	TT	6.573e^-5	0.141	INTRON cdc14	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3R	13810039	3R_13810039_SNP [dm3] 3R_17984317_SNP [dm6]	T	G	6.589e^-5	0.141	INTRON cpo	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	11300890	3L_11300890_SNP [dm3] 3L_11307790_SNP [dm6]	T	C	6.595e^-5	0.141	INTERGENIC
3R	10789054	3R_10789054_SNP [dm3] 3R_14963332_SNP [dm6]	A	T	6.606e^-5	0.141	INTERGENIC
3R	16558216	3R_16558216_SNP [dm3] 3R_20732494_SNP [dm6]	T	C	6.609e^-5	0.141	SYNONYMOUS_CODING CG31205
3R	8109086	3R_8109086_SNP [dm3] 3R_12283364_SNP [dm6]	G	A	6.613e^-5	0.141	INTRON svp
3R	10119234	3R_10119234_SNP [dm3] 3R_14293512_SNP [dm6]	T	G	6.613e^-5	0.141	INTRON CG12207
3R	8149867	3R_8149867_SNP [dm3] 3R_12324145_SNP [dm6]	C	T	6.613e^-5	0.141	SYNONYMOUS_CODING CG10013	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	8149879	3R_8149879_SNP [dm3] 3R_12324157_SNP [dm6]	T	C	6.613e^-5	0.141	SYNONYMOUS_CODING CG10013	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	8149912	3R_8149912_SNP [dm3] 3R_12324190_SNP [dm6]	T	C	6.613e^-5	0.141	SYNONYMOUS_CODING CG10013	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
3R	8157236	3R_8157236_SNP [dm3] 3R_12331514_SNP [dm6]	T	A	6.613e^-5	0.141	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
3R	8157307	3R_8157307_SNP [dm3] 3R_12331585_SNP [dm6]	A	T	6.613e^-5	0.141	INTERGENIC
3R	8166239	3R_8166239_SNP [dm3] 3R_12340517_SNP [dm6]	C	G	6.613e^-5	0.141	INTERGENIC
3R	4252790	3R_4252790_SNP [dm3] 3R_8427068_SNP [dm6]	T	C	6.636e^-5	0.141	INTRON CG45263
3R	13275216	3R_13275216_DEL [dm3] 3R_17449494_DEL [dm6]	ATGTACA	T	6.641e^-5	0.141	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3R	13275268	3R_13275268_SNP [dm3] 3R_17449546_SNP [dm6]	A	G	6.641e^-5	0.141	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3R	13275270	3R_13275270_SNP [dm3] 3R_17449548_SNP [dm6]	G	C	6.641e^-5	0.141	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
X	11582956	X_11582956_SNP [dm3] X_11688923_SNP [dm6]	A	G	6.650e^-5	0.141	INTRON bif	TF binding site BDTNP1_TFBS_dl
3L	10774593	3L_10774593_SNP [dm3] 3L_10781493_SNP [dm6]	G	A	6.651e^-5	0.141	INTERGENIC
2L	17040731	2L_17040731_SNP [dm3] 2L_17040731_SNP [dm6]	T	G	6.667e^-5	0.141	INTERGENIC
3R	10271290	3R_10271290_SNP [dm3] 3R_14445568_SNP [dm6]	T	C	6.669e^-5	0.141	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
X	14956144	X_14956144_SNP [dm3] X_15062111_SNP [dm6]	T	C	6.674e^-5	0.141	INTRON hiw
3R	10270625	3R_10270625_SNP [dm3] 3R_14444903_SNP [dm6]	T	A	6.677e^-5	0.141	INTRON cv-c	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	6089528	2R_6089528_SNP [dm3] 2R_10202023_SNP [dm6]	T	C	6.679e^-5	0.141	INTERGENIC
3L	13824591	3L_13824591_SNP [dm3] 3L_13831491_SNP [dm6]	A	T	6.704e^-5	0.141	INTERGENIC
2L	19339835	2L_19339835_SNP [dm3] 2L_19339835_SNP [dm6]	G	C	6.706e^-5	0.141	SYNONYMOUS_CODING dnt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	6259229	3R_6259229_SNP [dm3] 3R_10433507_SNP [dm6]	C	T	6.709e^-5	0.141	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	21335262	X_21335262_SNP [dm3] X_21464235_SNP [dm6]	T	G	6.713e^-5	0.141	INTERGENIC
3L	13179510	3L_13179510_SNP [dm3] 3L_13186410_SNP [dm6]	G	A	6.715e^-5	0.141	INTERGENIC
3R	6194330	3R_6194330_DEL [dm3] 3R_10368608_DEL [dm6]	GCC	T	6.720e^-5	0.141	INTRON Rfx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	7363731	2L_7363731_DEL [dm3] 2L_7363731_DEL [dm6]	TTAAGGTTGTCTATATT...	T	6.763e^-5	0.142	SPLICE_SITE_DONOR Wnt10 SPLICE_SITE_REGION Wnt10 UTR_5_PRIME Wnt10 INTRON Wnt10 INTRAGENIC Wnt10
3R	15953823	3R_15953823_SNP [dm3] 3R_20128101_SNP [dm6]	G	A	6.770e^-5	0.142	INTERGENIC
3R	9021822	3R_9021822_SNP [dm3] 3R_13196100_SNP [dm6]	A	C	6.808e^-5	0.142	INTERGENIC	TF binding site BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_inv
2L	20788362	2L_20788362_SNP [dm3] 2L_20788362_SNP [dm6]	A	T	6.843e^-5	0.143	DOWNSTREAM vari INTRON Pomp	TF binding site BDTNP1_TFBS_dl
3R	8221724	3R_8221724_SNP [dm3] 3R_12396002_SNP [dm6]	G	A	6.852e^-5	0.143	UPSTREAM CG10096 & 1 other DOWNSTREAM Cyp9f3Psi INTRON CG34402
3L	1401430	3L_1401430_SNP [dm3] 3L_1401430_SNP [dm6]	C	A	6.859e^-5	0.143	UTR_3_PRIME CG32320 UPSTREAM tRNA:E4:62Ad & 1 other INTRON Ptp61F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	10060721	3R_10060721_SNP [dm3] 3R_14234999_SNP [dm6]	T	C	6.866e^-5	0.143	INTERGENIC
2L	7434856	2L_7434856_SNP [dm3] 2L_7434856_SNP [dm6]	T	A	6.867e^-5	0.143	INTERGENIC
3R	8235840	3R_8235840_SNP [dm3] 3R_12410118_SNP [dm6]	T	C	6.878e^-5	0.143	INTRON CG5196	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_HSA
2L	6241374	2L_6241374_SNP [dm3] 2L_6241374_SNP [dm6]	A	G	6.903e^-5	0.143	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2L	1435202	2L_1435202_SNP [dm3] 2L_1435202_SNP [dm6]	T	A	6.908e^-5	0.143	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad
3R	8400763	3R_8400763_SNP [dm3] 3R_12575041_SNP [dm6]	C	G	6.965e^-5	0.144	INTRON Octbeta2R
3R	2857100	3R_2857100_SNP [dm3] 3R_7031378_SNP [dm6]	T	G	6.965e^-5	0.144	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv
3R	8929414	3R_8929414_SNP [dm3] 3R_13103692_SNP [dm6]	G	T	6.979e^-5	0.144	INTRON timeout
3L	17558387	3L_17558387_SNP [dm3] 3L_17565287_SNP [dm6]	T	C	6.982e^-5	0.144	DOWNSTREAM snoRNA:Me28S-A576 INTRON Eip74EF	TF binding site mE1_TFBS_HSA
2R	14289986	2R_14289986_SNP [dm3] 2R_18402481_SNP [dm6]	C	G	7.012e^-5	0.145	UPSTREAM GstE4 DOWNSTREAM CR43687 EXON CR43688	TF binding site mE1_TFBS_Trl
3R	8208870	3R_8208870_INS [dm3] 3R_12383148_INS [dm6]	A	ATTTGGCTGAGTAATTGG...	7.034e^-5	0.145	UPSTREAM GstD11 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	15159912	3R_15159912_SNP [dm3] 3R_19334190_SNP [dm6]	C	A	7.057e^-5	0.145	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3R	15092878	3R_15092878_DEL [dm3] 3R_19267156_DEL [dm6]	AA	A	7.064e^-5	0.145	INTERGENIC
3R	15092888	3R_15092888_SNP [dm3] 3R_19267166_SNP [dm6]	A	T	7.064e^-5	0.145	INTERGENIC
2R	12416604	2R_12416604_SNP [dm3] 2R_16529099_SNP [dm6]	A	T	7.068e^-5	0.145	INTRON Sema-2a
3R	6576075	3R_6576075_SNP [dm3] 3R_10750353_SNP [dm6]	C	G	7.077e^-5	0.145	UTR_5_PRIME TkR86C
3L	12663205	3L_12663205_SNP [dm3] 3L_12670105_SNP [dm6]	G	C	7.093e^-5	0.145	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	20187504	3L_20187504_SNP [dm3] 3L_20194404_SNP [dm6]	G	T	7.104e^-5	0.145	INTRON CG42674
3R	3875782	3R_3875782_SNP [dm3] 3R_8050060_SNP [dm6]	A	G	7.124e^-5	0.145	DOWNSTREAM CG43618 & 1 other INTRON CG43060
3R	4572507	3R_4572507_SNP [dm3] 3R_8746785_SNP [dm6]	A	T	7.158e^-5	0.146	INTRON CG9801	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	6109922	3R_6109922_SNP [dm3] 3R_10284200_SNP [dm6]	G	T	7.186e^-5	0.146	UPSTREAM CG43143 INTRON CG43143	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	11901922	2L_11901922_SNP [dm3] 2L_11901922_SNP [dm6]	T	A	7.228e^-5	0.147	INTRON Pde1c
3L	2432636	3L_2432636_SNP [dm3] 3L_2432636_SNP [dm6]	T	C	7.238e^-5	0.147	INTRON CG45186
3R	5472590	3R_5472590_SNP [dm3] 3R_9646868_SNP [dm6]	A	G	7.244e^-5	0.147	UPSTREAM Fst INTRON Dh44
3R	10851322	3R_10851322_SNP [dm3] 3R_15025600_SNP [dm6]	T	G	7.245e^-5	0.147	INTERGENIC
2R	3356580	2R_3356580_SNP [dm3] 2R_7469075_SNP [dm6]	A	C	7.271e^-5	0.147	INTRON Aldh-III
X	12361455	X_12361455_SNP [dm3] X_12467422_SNP [dm6]	C	G	7.272e^-5	0.147	INTRON CG42258	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12361514	X_12361514_INS [dm3] X_12467481_INS [dm6]	A	ATTATAAGGTTCTTA...	7.272e^-5	0.147	INTRON CG42258	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12361563	X_12361563_SNP [dm3] X_12467530_SNP [dm6]	A	G	7.272e^-5	0.147	INTRON CG42258	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	12361565	X_12361565_SNP [dm3] X_12467532_SNP [dm6]	T	A	7.272e^-5	0.147	INTRON CG42258	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	8427461	X_8427461_DEL [dm3] X_8533428_DEL [dm6]	GATG	G	7.300e^-5	0.147	INTRON Nrg	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10119233	3R_10119233_SNP [dm3] 3R_14293511_SNP [dm6]	C	T	7.311e^-5	0.147	INTRON CG12207
2R	18602573	2R_18602573_SNP [dm3] 2R_22715068_SNP [dm6]	T	C	7.334e^-5	0.148	INTRON CG30268	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	20378724	2L_20378724_SNP [dm3] 2L_20378724_SNP [dm6]	T	C	7.353e^-5	0.148	INTRON CG16798	TF binding site mE1_TFBS_cad
2L	9449015	2L_9449015_SNP [dm3] 2L_9449015_SNP [dm6]	C	G	7.359e^-5	0.148	UPSTREAM numb INTRON numb	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_jumu mE1_TFBS_kn mE1_TFBS_sens mE1_TFBS_Stat92E mE1_TFBS_Trl mE1_TFBS_Ubx mE1_TFBS_zfh1
3L	12473709	3L_12473709_SNP [dm3] 3L_12480609_SNP [dm6]	C	A	7.371e^-5	0.148	INTRON CG10663
X	6208279	X_6208279_SNP [dm3] X_6314246_SNP [dm6]	G	A	7.390e^-5	0.148	INTRON CG15894
2L	7643995	2L_7643995_SNP [dm3] 2L_7643995_SNP [dm6]	C	T	7.415e^-5	0.148	SYNONYMOUS_CODING Slob UTR_3_PRIME Slob
3R	5759448	3R_5759448_SNP [dm3] 3R_9933726_SNP [dm6]	A	C	7.417e^-5	0.148	INTRON Glut4EF
2R	3076014	2R_3076014_SNP [dm3] 2R_7188509_SNP [dm6]	T	A	7.436e^-5	0.148	INTRON pk	TF binding site BDTNP1_TFBS_dl mE1_TFBS_inv
3R	8646044	3R_8646044_SNP [dm3] 3R_12820322_SNP [dm6]	C	A	7.444e^-5	0.148	INTERGENIC
3R	5466017	3R_5466017_SNP [dm3] 3R_9640295_SNP [dm6]	A	T	7.454e^-5	0.148	UPSTREAM Dh44 INTRON Dh44
3R	8915027	3R_8915027_SNP [dm3] 3R_13089305_SNP [dm6]	C	A	7.472e^-5	0.148	UTR_5_PRIME CG34308 INTRON timeout	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	4868144	3R_4868144_SNP [dm3] 3R_9042422_SNP [dm6]	C	A	7.488e^-5	0.148	DOWNSTREAM Nmdmc & 1 other INTERGENIC
3R	4868145	3R_4868145_SNP [dm3] 3R_9042423_SNP [dm6]	A	G	7.488e^-5	0.148	DOWNSTREAM Nmdmc & 1 other INTERGENIC
3R	5916983	3R_5916983_SNP [dm3] 3R_10091261_SNP [dm6]	C	T	7.497e^-5	0.148	DOWNSTREAM CR45054 & 1 other INTERGENIC
3R	10890379	3R_10890379_SNP [dm3] 3R_15064657_SNP [dm6]	T	A	7.497e^-5	0.148	INTRON dpr9
2R	6509660	2R_6509660_SNP [dm3] 2R_10622155_SNP [dm6]	A	T	7.507e^-5	0.148	UPSTREAM CG11883 INTRON CG11883
2L	1175856	2L_1175856_SNP [dm3] 2L_1175856_SNP [dm6]	G	A	7.512e^-5	0.148	SYNONYMOUS_CODING CG4887	TF binding site BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_inv
X	6676375	X_6676375_SNP [dm3] X_6782342_SNP [dm6]	G	A	7.512e^-5	0.148	UTR_3_PRIME C3G
2L	7584498	2L_7584498_SNP [dm3] 2L_7584498_SNP [dm6]	T	A	7.557e^-5	0.149	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18904086	2L_18904086_SNP [dm3] 2L_18904086_SNP [dm6]	T	C	7.571e^-5	0.149	INTERGENIC
2L	9689142	2L_9689142_SNP [dm3] 2L_9689142_SNP [dm6]	T	C	7.595e^-5	0.149	INTRON Pka-C1
2L	9408965	2L_9408965_SNP [dm3] 2L_9408965_SNP [dm6]	T	A	7.609e^-5	0.149	INTRON Shawl
2L	6265021	2L_6265021_SNP [dm3] 2L_6265021_SNP [dm6]	C	T	7.616e^-5	0.149	UPSTREAM CG13983 INTRON Ddr
2R	12386551	2R_12386551_SNP [dm3] 2R_16499046_SNP [dm6]	T	A	7.616e^-5	0.149	INTRON CG7813	TF binding site BDTNP1_TFBS_dl
3L	4616497	3L_4616497_SNP [dm3] 3L_4616497_SNP [dm6]	C	T	7.616e^-5	0.149	INTRON Src64B
3L	9464446	3L_9464446_SNP [dm3] 3L_9471346_SNP [dm6]	A	G	7.616e^-5	0.149	SYNONYMOUS_CODING CG44838 INTRON CG44838	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	19731871	3R_19731871_SNP [dm3] 3R_23906149_SNP [dm6]	T	C	7.616e^-5	0.149	INTRON sba
3R	18102687	3R_18102687_SNP [dm3] 3R_22276965_SNP [dm6]	G	T	7.662e^-5	0.15	INTRON SKIP
X	12361518	X_12361518_SNP [dm3] X_12467485_SNP [dm6]	A	C	7.708e^-5	0.15	INTRON CG42258	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
4	865184	4_865184_SNP [dm3] 4_844558_SNP [dm6]	C	T	7.712e^-5	0.15	UPSTREAM fd102C DOWNSTREAM CR33797 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	10867187	X_10867187_INS [dm3] X_10973154_INS [dm6]	C	CAGCAGGC	7.716e^-5	0.15	INTRON CG42339
3L	10774286	3L_10774286_SNP [dm3] 3L_10781186_SNP [dm6]	G	A	7.777e^-5	0.151	INTERGENIC
2R	17663571	2R_17663571_SNP [dm3] 2R_21776066_SNP [dm6]	C	T	7.787e^-5	0.151	INTERGENIC
2R	17663631	2R_17663631_SNP [dm3] 2R_21776126_SNP [dm6]	T	C	7.787e^-5	0.151	INTERGENIC
2R	10504618	2R_10504618_SNP [dm3] 2R_14617113_SNP [dm6]	A	G	7.819e^-5	0.151	SYNONYMOUS_CODING Su_var_2-HP2	TF binding site mE1_TFBS_sens
X	11072365	X_11072365_SNP [dm3] X_11178332_SNP [dm6]	T	C	7.820e^-5	0.151	INTERGENIC
3R	13275285	3R_13275285_SNP [dm3] 3R_17449563_SNP [dm6]	C	G	7.821e^-5	0.151	UPSTREAM Eh INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
2L	9799151	2L_9799151_SNP [dm3] 2L_9799151_SNP [dm6]	C	T	7.821e^-5	0.151	INTRON nAChRalpha6
X	13695468	X_13695468_SNP [dm3] X_13801435_SNP [dm6]	T	C	7.847e^-5	0.152	INTRON inaE
3R	5945774	3R_5945774_SNP [dm3] 3R_10120052_SNP [dm6]	A	C	7.857e^-5	0.152	UTR_3_PRIME CG3940 DOWNSTREAM gammaSnap2 & 1 other
X	14888020	X_14888020_SNP [dm3] X_14993987_SNP [dm6]	G	A	7.879e^-5	0.152	INTRON eag	TF binding site mE1_TFBS_HSA
3L	456773	3L_456773_SNP [dm3] 3L_456773_SNP [dm6]	G	T	7.907e^-5	0.152	INTRON klar	TF binding site mE1_TFBS_HSA
3L	21726198	3L_21726198_SNP [dm3] 3L_21733098_SNP [dm6]	G	A	7.918e^-5	0.152	NON_SYNONYMOUS_CODING CG14568
3R	10397208	3R_10397208_SNP [dm3] 3R_14571486_SNP [dm6]	G	T	7.918e^-5	0.152	SYNONYMOUS_CODING CG7987	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	6544151	2R_6544151_SNP [dm3] 2R_10656646_SNP [dm6]	C	T	7.936e^-5	0.152	DOWNSTREAM CR44452 INTERGENIC
3R	4864153	3R_4864153_DEL [dm3] 3R_9038431_DEL [dm6]	TCTT	T	7.955e^-5	0.152	UPSTREAM hyx INTRON neur	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
3R	7293849	3R_7293849_SNP [dm3] 3R_11468127_SNP [dm6]	G	A	7.975e^-5	0.152	DOWNSTREAM CG17230 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	7301090	3R_7301090_SNP [dm3] 3R_11475368_SNP [dm6]	T	G	7.975e^-5	0.152	INTERGENIC	TF binding site mE1_TFBS_inv
2L	1890691	2L_1890691_SNP [dm3] 2L_1890691_SNP [dm6]	A	T	7.976e^-5	0.152	INTRON CG7337
3L	7044160	3L_7044160_SNP [dm3] 3L_7051060_SNP [dm6]	C	T	7.983e^-5	0.152	INTRON Mp
3R	8149903	3R_8149903_SNP [dm3] 3R_12324181_SNP [dm6]	C	T	8.011e^-5	0.153	SYNONYMOUS_CODING CG10013	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	9798812	3R_9798812_SNP [dm3] 3R_13973090_SNP [dm6]	G	A	8.012e^-5	0.153	DOWNSTREAM CR43460 INTRON rdx & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
3L	12065790	3L_12065790_SNP [dm3] 3L_12072690_SNP [dm6]	T	C	8.035e^-5	0.153	INTRON Sema-5c
2L	18932415	2L_18932415_SNP [dm3] 2L_18932415_SNP [dm6]	T	A	8.063e^-5	0.153	INTRON ssp3
3R	13890166	3R_13890166_SNP [dm3] 3R_18064444_SNP [dm6]	G	C	8.068e^-5	0.153	INTERGENIC	TF binding site mE1_TFBS_cad
2L	6118070	2L_6118070_DEL [dm3] 2L_6118070_DEL [dm6]	GT	G	8.071e^-5	0.153	UPSTREAM CG31642 INTRON stai
X	14892589	X_14892589_SNP [dm3] X_14998556_SNP [dm6]	T	C	8.097e^-5	0.154	UTR_3_PRIME eag INTRON eag
2L	11000979	2L_11000979_SNP [dm3] 2L_11000979_SNP [dm6]	A	T	8.145e^-5	0.154	UTR_5_PRIME aub INTRON aub
X	14754768	X_14754768_SNP [dm3] X_14860735_SNP [dm6]	T	G	8.160e^-5	0.154	INTRON Flo2
3R	4248024	3R_4248024_SNP [dm3] 3R_8422302_SNP [dm6]	G	T	8.160e^-5	0.154	INTRON CG45263
X	12361566	X_12361566_SNP [dm3] X_12467533_SNP [dm6]	G	T	8.161e^-5	0.154	INTRON CG42258	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	6241298	2L_6241298_SNP [dm3] 2L_6241298_SNP [dm6]	A	G	8.161e^-5	0.154	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Kr
2R	17568865	2R_17568865_SNP [dm3] 2R_21681360_SNP [dm6]	G	T	8.166e^-5	0.154	INTRON CG30263
X	15435881	X_15435881_SNP [dm3] X_15541848_SNP [dm6]	T	G	8.174e^-5	0.154	INTRON Ac13E
3R	4624600	3R_4624600_SNP [dm3] 3R_8798878_SNP [dm6]	G	T	8.213e^-5	0.154	INTRON Pif1A & 1 other
3L	1068956	3L_1068956_SNP [dm3] 3L_1068956_SNP [dm6]	C	T	8.216e^-5	0.154	INTRON bab1
2L	9225675	2L_9225675_SNP [dm3] 2L_9225675_SNP [dm6]	T	A	8.249e^-5	0.155	INTRON tai	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_Kr
2R	18733306	2R_18733306_SNP [dm3] 2R_22845783_SNP [dm6]	A	G	8.298e^-5	0.155	UPSTREAM CG3649 INTERGENIC	TF binding site mE1_TFBS_cad
3R	10018287	3R_10018287_SNP [dm3] 3R_14192565_SNP [dm6]	G	T	8.316e^-5	0.155	INTRON Dop1R1
3R	12117094	3R_12117094_SNP [dm3] 3R_16291372_SNP [dm6]	C	A	8.345e^-5	0.155	INTRON gish	TF binding site mE1_TFBS_bab1
3R	4195223	3R_4195223_SNP [dm3] 3R_8369501_SNP [dm6]	C	A	8.377e^-5	0.155	INTRON CG45263
3L	18325614	3L_18325614_SNP [dm3] 3L_18332514_SNP [dm6]	C	A	8.397e^-5	0.155	INTERGENIC	TF binding site BDTNP1_TFBS_da
X	13166542	X_13166542_SNP [dm3] X_13272509_SNP [dm6]	T	A	8.399e^-5	0.155	START_GAINED HDAC4 UTR_5_PRIME HDAC4 INTRON HDAC4	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	5477861	3R_5477861_SNP [dm3] 3R_9652139_SNP [dm6]	G	A	8.407e^-5	0.155	DOWNSTREAM CG43441 INTRON CG9492	TF binding site BDTNP1_TFBS_da
3R	5813779	3R_5813779_SNP [dm3] 3R_9988057_SNP [dm6]	G	A	8.408e^-5	0.155	NON_SYNONYMOUS_CODING Glut4EF UTR_3_PRIME Glut4EF	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	14880639	X_14880639_DEL [dm3] X_14986606_DEL [dm6]	TACACATAT	T	8.416e^-5	0.155	INTRON eag	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA

By genomic position
Variant impact
Gene name

Microbiota_OTU115 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results