©2022-2025 Deplancke lab, EPFL, 1015 Lausanne
By genomic position | |
Variant impact | |
Gene name |
Involved in binding site | |
Binding site |
Covariate | p-value | Significance |
---|---|---|
In_2L_t | 0.07619 |
Chromosome | Position | ID | Reference | Variant | p-value | FDR_BH | Transcript annotation | Binding site annotation | |
---|---|---|---|---|---|---|---|---|---|
3L | 1267036 | 3L_1267036_SNP [dm3] 3L_1267036_SNP [dm6] | C | A | 8.426e-12 | 1.568e-5 |
INTRON
CG9134 |
||
3R | 22459768 | 3R_22459768_SNP [dm3] 3R_26634046_SNP [dm6] | G | A | 1.604e-10 | 1.138e-4 |
NON_SYNONYMOUS_CODING
TwdlH UPSTREAM TwdlR |
||
2R | 13394527 | 2R_13394527_SNP [dm3] 2R_17507022_SNP [dm6] | A | G | 1.834e-10 | 1.138e-4 |
UTR_3_PRIME
CG43164 INTRON CG43164 |
||
2R | 17032827 | 2R_17032827_SNP [dm3] 2R_21145322_SNP [dm6] | T | C | 1.380e-9 | 4.949e-4 |
SYNONYMOUS_CODING
Xbp1 UTR_3_PRIME Xbp1 UPSTREAM Hmg-2 |
||
3L | 17621401 | 3L_17621401_SNP [dm3] 3L_17628301_SNP [dm6] | G | A | 1.465e-9 | 4.949e-4 |
SYNONYMOUS_CODING
CG7510 DOWNSTREAM scaRNA:MeU4-A65 |
||
3R | 15006202 | 3R_15006202_SNP [dm3] 3R_19180480_SNP [dm6] | A | G | 1.759e-9 | 4.949e-4 |
START_GAINED
CG5555 UTR_5_PRIME CG5555 UPSTREAM CG31475 & 1 other |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA
|
|
3L | 1265905 | 3L_1265905_SNP [dm3] 3L_1265905_SNP [dm6] | A | G | 2.128e-9 | 4.949e-4 |
UTR_5_PRIME
CG9134 INTRON CG9134 |
TF binding site
mE1_TFBS_Trl
|
|
3L | 1265911 | 3L_1265911_SNP [dm3] 3L_1265911_SNP [dm6] | A | T | 2.128e-9 | 4.949e-4 |
UTR_5_PRIME
CG9134 INTRON CG9134 |
TF binding site
mE1_TFBS_Trl
|
|
3L | 20125117 | 3L_20125117_SNP [dm3] 3L_20132017_SNP [dm6] | T | A | 2.935e-9 | 5.153e-4 |
UPSTREAM
obst-J DOWNSTREAM CG7335 INTRON gig |
||
2L | 4651746 | 2L_4651746_SNP [dm3] 2L_4651746_SNP [dm6] | A | T | 3.016e-9 | 5.153e-4 |
INTRON
CG3355 |
||
2R | 13394575 | 2R_13394575_SNP [dm3] 2R_17507070_SNP [dm6] | T | A | 3.214e-9 | 5.153e-4 |
UTR_3_PRIME
CG43164 INTRON CG43164 |
||
X | 10448694 | X_10448694_SNP [dm3] X_10554661_SNP [dm6] | A | C | 3.466e-9 | 5.153e-4 |
INTRON
spri |
||
3L | 17820876 | 3L_17820876_SNP [dm3] 3L_17827776_SNP [dm6] | C | G | 3.612e-9 | 5.153e-4 |
INTRON
Grd |
||
2L | 4651749 | 2L_4651749_SNP [dm3] 2L_4651749_SNP [dm6] | A | T | 3.878e-9 | 5.153e-4 |
INTRON
CG3355 |
||
3R | 18302458 | 3R_18302458_SNP [dm3] 3R_22476736_SNP [dm6] | C | T | 4.774e-9 | 5.537e-4 |
INTRON
Nrx-1 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_Trl
|
|
3R | 10742973 | 3R_10742973_SNP [dm3] 3R_14917251_SNP [dm6] | G | T | 4.780e-9 | 5.537e-4 |
INTERGENIC
|
||
3R | 7408270 | 3R_7408270_SNP [dm3] 3R_11582548_SNP [dm6] | G | A | 5.545e-9 | 5.537e-4 |
UPSTREAM
wkd INTRON wkd |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_chinmo
|
|
3L | 20142685 | 3L_20142685_SNP [dm3] 3L_20149585_SNP [dm6] | C | G | 5.573e-9 | 5.537e-4 |
DOWNSTREAM
CG42674 INTERGENIC |
||
2R | 17786108 | 2R_17786108_SNP [dm3] 2R_21898603_SNP [dm6] | G | C | 5.893e-9 | 5.537e-4 |
INTRON
Fili |
||
X | 9995477 | X_9995477_SNP [dm3] X_10101444_SNP [dm6] | T | A | 6.054e-9 | 5.537e-4 |
INTRON
RhoU |
||
3R | 27128898 | 3R_27128898_SNP [dm3] 3R_31303176_SNP [dm6] | T | G | 6.250e-9 | 5.537e-4 |
SYNONYMOUS_CODING
CG11340 |
TF binding site
mE1_TFBS_sens
|
|
3R | 10742971 | 3R_10742971_SNP [dm3] 3R_14917249_SNP [dm6] | A | G | 7.093e-9 | 5.631e-4 |
INTERGENIC
|
||
X | 9989207 | X_9989207_SNP [dm3] X_10095174_SNP [dm6] | A | T | 7.098e-9 | 5.631e-4 |
INTRON
RhoU |
||
3R | 10742970 | 3R_10742970_SNP [dm3] 3R_14917248_SNP [dm6] | A | G | 7.263e-9 | 5.631e-4 |
INTERGENIC
|
||
2R | 15363608 | 2R_15363608_SNP [dm3] 2R_19476103_SNP [dm6] | C | A | 7.628e-9 | 5.677e-4 |
INTRON
par-1 |
||
2L | 4651752 | 2L_4651752_SNP [dm3] 2L_4651752_SNP [dm6] | G | T | 8.881e-9 | 6.355e-4 |
INTRON
CG3355 |
||
2R | 17907306 | 2R_17907306_SNP [dm3] 2R_22019801_SNP [dm6] | A | C | 1.160e-8 | 7.991e-4 |
INTRON
CG34370 |
||
2L | 4651847 | 2L_4651847_SNP [dm3] 2L_4651847_SNP [dm6] | A | C | 1.409e-8 | 9.360e-4 |
SYNONYMOUS_CODING
CG3355 |
TF binding site
mE1_TFBS_chinmo
|
|
2L | 18345672 | 2L_18345672_SNP [dm3] 2L_18345672_SNP [dm6] | T | C | 1.830e-8 | 0.001 |
INTRON
Fas3 |
TF binding site
mE1_TFBS_inv
|
|
3R | 25907637 | 3R_25907637_SNP [dm3] 3R_30081915_SNP [dm6] | A | C | 1.831e-8 | 0.001 |
INTRON
sima |
||
3L | 14609897 | 3L_14609897_SNP [dm3] 3L_14616797_SNP [dm6] | C | A | 1.923e-8 | 0.001 |
INTRON
shd |
||
3L | 14609938 | 3L_14609938_SNP [dm3] 3L_14616838_SNP [dm6] | A | G | 1.923e-8 | 0.001 |
INTRON
shd |
||
3R | 8733591 | 3R_8733591_SNP [dm3] 3R_12907869_SNP [dm6] | G | A | 1.924e-8 | 0.001 |
INTERGENIC
|
||
3R | 22214579 | 3R_22214579_SNP [dm3] 3R_26388857_SNP [dm6] | T | A | 1.999e-8 | 0.001 |
INTERGENIC
|
||
2L | 16530582 | 2L_16530582_SNP [dm3] 2L_16530582_SNP [dm6] | A | T | 2.049e-8 | 0.001 |
INTRON
CG5953 |
||
X | 10146042 | X_10146042_SNP [dm3] X_10252009_SNP [dm6] | A | G | 2.055e-8 | 0.001 |
INTRON
Hk |
||
3R | 14718822 | 3R_14718822_SNP [dm3] 3R_18893100_SNP [dm6] | C | G | 2.103e-8 | 0.001 |
INTERGENIC
|
||
2R | 18930044 | 2R_18930044_SNP [dm3] 2R_23042521_SNP [dm6] | C | T | 2.126e-8 | 0.001 |
UTR_5_PRIME
CG42741 INTRON twi |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA
|
|
3L | 1683617 | 3L_1683617_SNP [dm3] 3L_1683617_SNP [dm6] | A | T | 2.126e-8 | 0.001 |
INTRON
CG7991 |
TF binding site
mE1_TFBS_chinmo
|
|
3L | 20148520 | 3L_20148520_SNP [dm3] 3L_20155420_SNP [dm6] | T | A | 2.284e-8 | 0.001 |
INTRON
CG42674 |
||
X | 198663 | X_198663_SNP [dm3] X_304630_SNP [dm6] | C | T | 2.292e-8 | 0.001 |
INTRON
CG3777 |
TF binding site
BDTNP1_TFBS_twi
|
|
3L | 14609826 | 3L_14609826_SNP [dm3] 3L_14616726_SNP [dm6] | T | G | 2.559e-8 | 0.001 |
INTRON
shd |
||
2R | 7946478 | 2R_7946478_SNP [dm3] 2R_12058973_SNP [dm6] | C | A | 2.714e-8 | 0.001 |
INTRON
Drep-3 |
||
2R | 13568462 | 2R_13568462_SNP [dm3] 2R_17680957_SNP [dm6] | A | G | 3.405e-8 | 0.001 |
INTRON
Sema-1b |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 13568471 | 2R_13568471_INS [dm3] 2R_17680966_INS [dm6] | T | TATAT | 3.405e-8 | 0.001 |
INTRON
Sema-1b |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
X | 2179675 | X_2179675_INS [dm3] X_2285642_INS [dm6] | A | AG | 3.570e-8 | 0.001 |
INTRON
CG2865 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 13568877 | 2R_13568877_SNP [dm3] 2R_17681372_SNP [dm6] | C | A | 3.606e-8 | 0.001 |
INTRON
Sema-1b |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad
|
|
2L | 4651991 | 2L_4651991_SNP [dm3] 2L_4651991_SNP [dm6] | C | T | 3.691e-8 | 0.001 |
SYNONYMOUS_CODING
CG3355 |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 13568487 | 2R_13568487_SNP [dm3] 2R_17680982_SNP [dm6] | T | C | 3.700e-8 | 0.001 |
INTRON
Sema-1b |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
|
|
2R | 18511623 | 2R_18511623_SNP [dm3] 2R_22624118_SNP [dm6] | C | T | 3.788e-8 | 0.001 |
INTRON
CG33143 |
||
2L | 10941742 | 2L_10941742_SNP [dm3] 2L_10941742_SNP [dm6] | T | A | 3.851e-8 | 0.001 |
DOWNSTREAM
CR44492 INTRON dpr2 |
||
3R | 20598446 | 3R_20598446_SNP [dm3] 3R_24772724_SNP [dm6] | G | A | 3.967e-8 | 0.001 |
INTRON
CG42331 |
||
2L | 10941707 | 2L_10941707_SNP [dm3] 2L_10941707_SNP [dm6] | C | T | 4.519e-8 | 0.002 |
DOWNSTREAM
CR44492 INTRON dpr2 |
||
3R | 6685499 | 3R_6685499_SNP [dm3] 3R_10859777_SNP [dm6] | G | A | 4.793e-8 | 0.002 |
SYNONYMOUS_CODING
CG14694 DOWNSTREAM CG6574 |
TF binding site
BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
|
|
X | 5951250 | X_5951250_DEL [dm3] X_6057217_DEL [dm6] | TTT | T | 4.926e-8 | 0.002 |
INTRON
CG5921 |
TF binding site
BDTNP1_TFBS_twi
|
|
3R | 18517580 | 3R_18517580_SNP [dm3] 3R_22691858_SNP [dm6] | T | G | 5.156e-8 | 0.002 |
NON_SYNONYMOUS_CODING
Nup133 |
TF binding site
mE1_TFBS_cad
|
|
3L | 9443614 | 3L_9443614_SNP [dm3] 3L_9450514_SNP [dm6] | C | A | 5.442e-8 | 0.002 |
UTR_3_PRIME
CG3529 DOWNSTREAM CG3448 |
||
3L | 14609765 | 3L_14609765_SNP [dm3] 3L_14616665_SNP [dm6] | A | T | 6.052e-8 | 0.002 |
UTR_5_PRIME
shd INTRON shd |
||
3L | 20124067 | 3L_20124067_SNP [dm3] 3L_20130967_SNP [dm6] | T | A | 6.389e-8 | 0.002 |
SYNONYMOUS_CODING
obst-J INTRON gig |
TF binding site
mE1_TFBS_chinmo mE1_TFBS_HSA
|
|
3R | 20598451 | 3R_20598451_SNP [dm3] 3R_24772729_SNP [dm6] | A | C | 6.696e-8 | 0.002 |
INTRON
CG42331 |
||
3L | 1682547 | 3L_1682547_SNP [dm3] 3L_1682547_SNP [dm6] | T | C | 7.440e-8 | 0.002 |
INTRON
CG7991 |
||
2R | 18610848 | 2R_18610848_SNP [dm3] 2R_22723343_SNP [dm6] | T | A | 7.551e-8 | 0.002 |
INTRON
jbug |
TF binding site
mE1_TFBS_cad mE1_TFBS_inv
|
|
2L | 12161557 | 2L_12161557_SNP [dm3] 2L_12161557_SNP [dm6] | T | A | 7.604e-8 | 0.002 |
NON_SYNONYMOUS_CODING
CG31760 UPSTREAM CG31861 |
||
3R | 24458866 | 3R_24458866_SNP [dm3] 3R_28633144_SNP [dm6] | T | A | 8.635e-8 | 0.003 |
INTRON
CG10011 |
TF binding site
mE1_TFBS_sens
|
|
2R | 14553551 | 2R_14553551_SNP [dm3] 2R_18666046_SNP [dm6] | A | T | 8.959e-8 | 0.003 |
UPSTREAM
CG33136 INTERGENIC |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_run
|
|
3R | 10797461 | 3R_10797461_SNP [dm3] 3R_14971739_SNP [dm6] | C | G | 9.646e-8 | 0.003 |
INTERGENIC
|
||
3L | 14609861 | 3L_14609861_SNP [dm3] 3L_14616761_SNP [dm6] | T | C | 9.998e-8 | 0.003 |
INTRON
shd |
||
3L | 14609881 | 3L_14609881_SNP [dm3] 3L_14616781_SNP [dm6] | T | A | 9.998e-8 | 0.003 |
INTRON
shd |
||
3R | 23312737 | 3R_23312737_SNP [dm3] 3R_27487015_SNP [dm6] | T | C | 1.002e-7 | 0.003 |
UPSTREAM
Gr98a INTERGENIC |
||
3R | 26002253 | 3R_26002253_SNP [dm3] 3R_30176531_SNP [dm6] | C | A | 1.004e-7 | 0.003 |
NON_SYNONYMOUS_CODING
CG1983 |
||
3R | 20500622 | 3R_20500622_SNP [dm3] 3R_24674900_SNP [dm6] | T | C | 1.006e-7 | 0.003 |
INTRON
slo |
||
3R | 16671543 | 3R_16671543_SNP [dm3] 3R_20845821_SNP [dm6] | G | A | 1.048e-7 | 0.003 |
DOWNSTREAM
CG15695 INTERGENIC |
TF binding site
BDTNP1_TFBS_dl
|
|
2R | 17907323 | 2R_17907323_SNP [dm3] 2R_22019818_SNP [dm6] | G | T | 1.084e-7 | 0.003 |
INTRON
CG34370 |
||
2R | 19824631 | 2R_19824631_SNP [dm3] 2R_23937108_SNP [dm6] | G | T | 1.085e-7 | 0.003 |
UTR_3_PRIME
CG3735 DOWNSTREAM CG3735 |
||
X | 16319823 | X_16319823_SNP [dm3] X_16425790_SNP [dm6] | G | C | 1.113e-7 | 0.003 |
INTRON
hang |
TF binding site
BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
|
|
X | 10448953 | X_10448953_SNP [dm3] X_10554920_SNP [dm6] | A | G | 1.148e-7 | 0.003 |
INTRON
spri |
||
2L | 4652030 | 2L_4652030_SNP [dm3] 2L_4652030_SNP [dm6] | T | C | 1.330e-7 | 0.003 |
SYNONYMOUS_CODING
CG3355 |
TF binding site
mE1_TFBS_chinmo
|
|
2R | 18064541 | 2R_18064541_SNP [dm3] 2R_22177036_SNP [dm6] | C | T | 1.332e-7 | 0.003 |
SYNONYMOUS_CODING
CG6758 UPSTREAM CR45151 DOWNSTREAM CG11170 |
TF binding site
mE1_TFBS_chinmo
|
|
X | 10448920 | X_10448920_SNP [dm3] X_10554887_SNP [dm6] | A | C | 1.411e-7 | 0.003 |
INTRON
spri |
||
2R | 14693442 | 2R_14693442_SNP [dm3] 2R_18805937_SNP [dm6] | T | C | 1.533e-7 | 0.003 |
INTRON
CR44468 EXON CR44468 |
TF binding site
BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
|
|
3R | 20598378 | 3R_20598378_SNP [dm3] 3R_24772656_SNP [dm6] | A | C | 1.536e-7 | 0.003 |
INTRON
CG42331 |
||
3L | 449945 | 3L_449945_SNP [dm3] 3L_449945_SNP [dm6] | T | A | 1.540e-7 | 0.003 |
INTRON
klar |
||
3L | 20151293 | 3L_20151293_SNP [dm3] 3L_20158193_SNP [dm6] | G | T | 1.579e-7 | 0.004 |
INTRON
CG42674 |
||
3L | 17828757 | 3L_17828757_SNP [dm3] 3L_17835657_SNP [dm6] | A | G | 1.589e-7 | 0.004 |
UPSTREAM
CG32189 INTRON Grd |
||
X | 10448670 | X_10448670_SNP [dm3] X_10554637_SNP [dm6] | A | G | 1.605e-7 | 0.004 |
INTRON
spri |
||
X | 14081697 | X_14081697_SNP [dm3] X_14187664_SNP [dm6] | C | A | 1.738e-7 | 0.004 |
UTR_3_PRIME
CG12481 |
||
3L | 17693433 | 3L_17693433_SNP [dm3] 3L_17700333_SNP [dm6] | T | G | 1.866e-7 | 0.004 |
INTRON
Ccn |
||
X | 9995812 | X_9995812_SNP [dm3] X_10101779_SNP [dm6] | T | A | 1.907e-7 | 0.004 |
INTRON
RhoU |
||
3L | 3850886 | 3L_3850886_SNP [dm3] 3L_3850886_SNP [dm6] | C | T | 1.923e-7 | 0.004 |
INTRON
Awh |
||
2L | 4792467 | 2L_4792467_SNP [dm3] 2L_4792467_SNP [dm6] | A | G | 1.957e-7 | 0.004 |
INTRON
CG15630 |
||
3L | 826240 | 3L_826240_SNP [dm3] 3L_826240_SNP [dm6] | C | T | 2.148e-7 | 0.004 |
DOWNSTREAM
CG13900 & 2 others INTERGENIC |
||
2R | 13531420 | 2R_13531420_SNP [dm3] 2R_17643915_SNP [dm6] | T | A | 2.193e-7 | 0.004 |
INTERGENIC
|
||
2R | 13531421 | 2R_13531421_SNP [dm3] 2R_17643916_SNP [dm6] | C | A | 2.193e-7 | 0.004 |
INTERGENIC
|
||
2R | 13531428 | 2R_13531428_SNP [dm3] 2R_17643923_SNP [dm6] | G | A | 2.193e-7 | 0.004 |
INTERGENIC
|
||
2L | 7093843 | 2L_7093843_SNP [dm3] 2L_7093843_SNP [dm6] | A | C | 2.200e-7 | 0.004 |
INTERGENIC
|
TF binding site
BDTNP1_TFBS_dl
|
|
3L | 17693439 | 3L_17693439_SNP [dm3] 3L_17700339_SNP [dm6] | G | T | 2.206e-7 | 0.004 |
INTRON
Ccn |
||
2R | 8720799 | 2R_8720799_SNP [dm3] 2R_12833294_SNP [dm6] | G | T | 2.227e-7 | 0.004 |
INTERGENIC
|
||
3L | 23247735 | 3L_23247735_SNP [dm3] 3L_23254635_SNP [dm6] | A | G | 2.341e-7 | 0.004 |
INTRON
nAChRalpha4 |
TF binding site
mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
|
|
2R | 12746551 | 2R_12746551_DEL [dm3] 2R_16859046_DEL [dm6] | TAACT | T | 2.437e-7 | 0.004 |
INTRON
Dek |
||
3R | 10797544 | 3R_10797544_SNP [dm3] 3R_14971822_SNP [dm6] | A | T | 2.451e-7 | 0.004 |
INTERGENIC
|