DGRPool

GWAS results were computed on dm3 genome.

If you want to make an independent analysis with DGRP2 or PLINK2, you can find here prepared input files for this phenotype: DGRP2 results PLINK2 results

Full results

Phenotype distribution and association to known covariates

Shapiro-Wilk test of normality (p-value=1.479e^-13)
Null Hypothesis is rejected (p<=0.05).
Interpretation: NOT NORMAL distribution of this phenotype

We tested for association of this phenotype with 6 known covariates Huang et al., 2014 using both ANOVA and Kruskal-Wallis association tests.

ANOVA test

Covariate	p-value	Significance
In_3R_K	0.002916

Kruskal-Wallis test

Covariate	χ²	p-value	Significance
In_3R_K	10.2972	0.0058

PNG PDF

QQplot

PNG PDF

Manhattan plot

GWAS results

6072 significant hits at p-value < 0.001. The 1000 top results are displayed in the table below.

We performed a gene enrichment calculation (Fisher's exact test) of all GWAS-associated genes at p < 0.001. Genesets were taken from two database: the Gene Ontology (GO) and the FlyBase phenotypes. GO enrichment FlyBase phenotype enrichment

Variant impact HIGH MODERATE LOW MODIFIER

Chromosome	Position	ID	Reference	Variant	p-value	FDR_BH	Transcript annotation	Binding site annotation
3L	12031268	3L_12031268_SNP [dm3] 3L_12038168_SNP [dm6]	C	G	7.121e^-17	1.325e^-10	INTRON rols
3L	8451039	3L_8451039_SNP [dm3] 3L_8457939_SNP [dm6]	C	T	5.110e^-13	4.071e^-7	INTRON Gug	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_Trl
2R	17866839	2R_17866839_SNP [dm3] 2R_21979334_SNP [dm6]	T	C	6.565e^-13	4.071e^-7	SYNONYMOUS_CODING Gr58b UPSTREAM Gr58a	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	5855431	3R_5855431_SNP [dm3] 3R_10029709_SNP [dm6]	G	C	3.357e^-12	1.561e^-6	INTRON Mical
2R	15207702	2R_15207702_INS [dm3] 2R_19320197_INS [dm6]	A	ACATTACA	4.977e^-12	1.852e^-6	INTRON Rgk1
3R	9795836	3R_9795836_SNP [dm3] 3R_13970114_SNP [dm6]	C	T	9.593e^-12	2.974e^-6	SYNONYMOUS_CODING rdx	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	11522765	3L_11522765_SNP [dm3] 3L_11529665_SNP [dm6]	T	C	1.492e^-11	3.615e^-6	INTRON Mob2
2R	8176319	2R_8176319_INS [dm3] 2R_12288814_INS [dm6]	A	ATA	1.555e^-11	3.615e^-6	INTRON CG42700
2L	3867675	2L_3867675_SNP [dm3] 2L_3867675_SNP [dm6]	C	T	4.104e^-11	7.993e^-6	UPSTREAM Cep97 DOWNSTREAM CG3964 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA
2L	12765169	2L_12765169_SNP [dm3] 2L_12765169_SNP [dm6]	T	C	4.296e^-11	7.993e^-6	INTERGENIC
2R	16693092	2R_16693092_SNP [dm3] 2R_20805587_SNP [dm6]	A	G	5.110e^-11	8.644e^-6	INTERGENIC
2L	1707752	2L_1707752_SNP [dm3] 2L_1707752_SNP [dm6]	G	A	6.386e^-11	9.139e^-6	UTR_3_PRIME CG17660 UPSTREAM CR44976 DOWNSTREAM cpb	TF binding site mE1_TFBS_cad
2L	1707753	2L_1707753_SNP [dm3] 2L_1707753_SNP [dm6]	G	A	6.386e^-11	9.139e^-6	UTR_3_PRIME CG17660 UPSTREAM CR44976 DOWNSTREAM cpb	TF binding site mE1_TFBS_cad
2R	14709468	2R_14709468_DEL [dm3] 2R_18821963_DEL [dm6]	CC	C	1.344e^-10	1.786e^-5	DOWNSTREAM CG15097 & 1 other INTRON Phb2	TF binding site mE1_TFBS_cad
2R	15042857	2R_15042857_SNP [dm3] 2R_19155352_SNP [dm6]	A	C	1.574e^-10	1.952e^-5	UTR_5_PRIME ena INTRON ena	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	12765157	2L_12765157_SNP [dm3] 2L_12765157_SNP [dm6]	T	C	1.819e^-10	2.115e^-5	INTERGENIC
3R	17137902	3R_17137902_SNP [dm3] 3R_21312180_SNP [dm6]	T	A	2.244e^-10	2.456e^-5	EXON Hsromega
2R	14952171	2R_14952171_SNP [dm3] 2R_19064666_SNP [dm6]	G	T	2.702e^-10	2.793e^-5	INTERGENIC	TF binding site mE1_TFBS_HSA
3R	17137907	3R_17137907_SNP [dm3] 3R_21312185_SNP [dm6]	G	A	3.253e^-10	3.185e^-5	EXON Hsromega
3L	16768392	3L_16768392_SNP [dm3] 3L_16775292_SNP [dm6]	C	T	3.702e^-10	3.316e^-5	SYNONYMOUS_CODING Nrt	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	19895267	X_19895267_SNP [dm3] X_20001234_SNP [dm6]	C	T	3.742e^-10	3.316e^-5	NON_SYNONYMOUS_CODING CG17003	TF binding site mE1_TFBS_chinmo
3L	5285574	3L_5285574_SNP [dm3] 3L_5292474_SNP [dm6]	A	T	4.123e^-10	3.487e^-5	INTERGENIC
2L	6626194	2L_6626194_SNP [dm3] 2L_6626194_SNP [dm6]	G	C	4.802e^-10	3.745e^-5	NON_SYNONYMOUS_CODING Oatp26F DOWNSTREAM CG34345	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	16598389	2L_16598389_SNP [dm3] 2L_16598389_SNP [dm6]	T	G	4.863e^-10	3.745e^-5	INTRON CG42389	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
X	17894069	X_17894069_SNP [dm3] X_18000036_SNP [dm6]	C	A	5.135e^-10	3.745e^-5	INTRON Sh
3L	16427992	3L_16427992_SNP [dm3] 3L_16434892_SNP [dm6]	T	C	5.233e^-10	3.745e^-5	INTRON CG33158 & 1 other
2R	5635494	2R_5635494_SNP [dm3] 2R_9747989_SNP [dm6]	G	T	6.088e^-10	4.172e^-5	UTR_5_PRIME sqa UPSTREAM CheA46a
X	10860656	X_10860656_SNP [dm3] X_10966623_SNP [dm6]	A	T	6.389e^-10	4.172e^-5	INTRON C901
2L	2070954	2L_2070954_DEL [dm3] 2L_2070954_DEL [dm6]	TCTTTGATTT	T	6.503e^-10	4.172e^-5	INTRON dpr3
2L	171817	2L_171817_SNP [dm3] 2L_171817_SNP [dm6]	G	A	6.995e^-10	4.338e^-5	INTRON spen	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	4928467	X_4928467_SNP [dm3] X_5034434_SNP [dm6]	T	A	7.329e^-10	4.398e^-5	INTRON CR44833
3R	5587282	3R_5587282_SNP [dm3] 3R_9761560_SNP [dm6]	T	A	9.538e^-10	5.545e^-5	UTR_3_PRIME Snap24 DOWNSTREAM CG8417
3L	18655273	3L_18655273_SNP [dm3] 3L_18662173_SNP [dm6]	G	A	1.351e^-9	7.615e^-5	INTRON MYPT-75D
2L	710274	2L_710274_SNP [dm3] 2L_710274_SNP [dm6]	C	T	1.763e^-9	9.647e^-5	UPSTREAM CR44988 INTRON ds
3L	18655225	3L_18655225_SNP [dm3] 3L_18662125_SNP [dm6]	A	T	1.860e^-9	9.886e^-5	INTRON MYPT-75D
2L	20388449	2L_20388449_SNP [dm3] 2L_20388449_SNP [dm6]	G	T	3.182e^-9	1.634e^-4	INTRON CG10947
X	8478150	X_8478150_SNP [dm3] X_8584117_SNP [dm6]	G	A	3.250e^-9	1.634e^-4	NON_SYNONYMOUS_CODING CG12065	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
3L	14206003	3L_14206003_INS [dm3] 3L_14212903_INS [dm6]	T	TGG	3.707e^-9	1.815e^-4	INTRON nuf	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2L	2085036	2L_2085036_SNP [dm3] 2L_2085036_SNP [dm6]	G	T	3.981e^-9	1.894e^-4	DOWNSTREAM CR44055 INTRON dpr3
3R	2318018	3R_2318018_SNP [dm3] 3R_6492296_SNP [dm6]	G	A	4.100e^-9	1.894e^-4	INTRON CG15186	TF binding site mE1_TFBS_cad
2R	7313871	2R_7313871_DEL [dm3] 2R_11426366_DEL [dm6]	ATAA	A	4.339e^-9	1.894e^-4	INTRON Drip
2R	1024810	2R_1024810_SNP [dm3] 2R_5137305_SNP [dm6]	A	T	4.350e^-9	1.894e^-4	INTERGENIC	transposable element FlyBase
3R	9628976	3R_9628976_INS [dm3] 3R_13803254_INS [dm6]	C	CC	4.377e^-9	1.894e^-4	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	19622756	2L_19622756_SNP [dm3] 2L_19622756_SNP [dm6]	T	C	5.997e^-9	2.536e^-4	INTRON Lar
3R	3416388	3R_3416388_SNP [dm3] 3R_7590666_SNP [dm6]	C	T	9.081e^-9	3.755e^-4	INTRON CG34127
2R	11585560	2R_11585560_SNP [dm3] 2R_15698055_SNP [dm6]	C	G	1.077e^-8	4.174e^-4	DOWNSTREAM CG30080 & 2 others INTERGENIC	TF binding site mE1_TFBS_bab1
2R	15209666	2R_15209666_SNP [dm3] 2R_19322161_SNP [dm6]	T	A	1.131e^-8	4.174e^-4	INTRON Rgk1	TF binding site mE1_TFBS_inv
3L	274909	3L_274909_SNP [dm3] 3L_274909_SNP [dm6]	T	C	1.152e^-8	4.174e^-4	UTR_3_PRIME miple2 UPSTREAM ttm2
2L	1714084	2L_1714084_SNP [dm3] 2L_1714084_SNP [dm6]	C	T	1.178e^-8	4.174e^-4	SYNONYMOUS_CODING frtz	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	7749889	X_7749889_SNP [dm3] X_7855856_SNP [dm6]	T	C	1.250e^-8	4.174e^-4	INTERGENIC
3R	1761481	3R_1761481_INS [dm3] 3R_5935759_INS [dm6]	C	CGTCTAA	1.253e^-8	4.174e^-4	INTRON CG34113
3R	1761482	3R_1761482_DEL [dm3] 3R_5935760_DEL [dm6]	TTGCCATTA	T	1.253e^-8	4.174e^-4	INTRON CG34113
X	12060488	X_12060488_SNP [dm3] X_12166455_SNP [dm6]	A	G	1.283e^-8	4.174e^-4	INTRON Ten-a
X	19908450	X_19908450_SNP [dm3] X_20014417_SNP [dm6]	C	T	1.347e^-8	4.174e^-4	UPSTREAM Dop2R INTRON Dop2R
X	19908498	X_19908498_SNP [dm3] X_20014465_SNP [dm6]	T	A	1.485e^-8	4.174e^-4	UPSTREAM Dop2R INTRON Dop2R
2L	15029851	2L_15029851_SNP [dm3] 2L_15029851_SNP [dm6]	C	T	1.490e^-8	4.174e^-4	SYNONYMOUS_CODING GABA-B-R1 DOWNSTREAM CG33310
2L	15031365	2L_15031365_SNP [dm3] 2L_15031365_SNP [dm6]	G	T	1.490e^-8	4.174e^-4	NON_SYNONYMOUS_CODING CG31832 INTRON GABA-B-R1
2L	15031905	2L_15031905_SNP [dm3] 2L_15031905_SNP [dm6]	A	G	1.490e^-8	4.174e^-4	UPSTREAM CG31832 INTRON GABA-B-R1
2L	15031956	2L_15031956_SNP [dm3] 2L_15031956_SNP [dm6]	A	T	1.490e^-8	4.174e^-4	UPSTREAM CG31832 INTRON GABA-B-R1
2L	15031960	2L_15031960_SNP [dm3] 2L_15031960_SNP [dm6]	T	G	1.490e^-8	4.174e^-4	UPSTREAM CG31832 INTRON GABA-B-R1
2L	16609803	2L_16609803_SNP [dm3] 2L_16609803_SNP [dm6]	G	A	1.490e^-8	4.174e^-4	NON_SYNONYMOUS_CODING CG4631 INTRON CG42389
3R	5655791	3R_5655791_SNP [dm3] 3R_9830069_SNP [dm6]	A	T	1.490e^-8	4.174e^-4	INTRON Teh1
3R	5655867	3R_5655867_SNP [dm3] 3R_9830145_SNP [dm6]	T	C	1.490e^-8	4.174e^-4	INTRON Teh1
3R	5865381	3R_5865381_SNP [dm3] 3R_10039659_SNP [dm6]	G	A	1.490e^-8	4.174e^-4	INTRON Mical
3R	5866688	3R_5866688_SNP [dm3] 3R_10040966_SNP [dm6]	T	C	1.490e^-8	4.174e^-4	INTRON Mical
2R	15209632	2R_15209632_SNP [dm3] 2R_19322127_SNP [dm6]	T	G	1.534e^-8	4.174e^-4	INTRON Rgk1	TF binding site mE1_TFBS_inv
X	8809756	X_8809756_SNP [dm3] X_8915723_SNP [dm6]	A	T	1.603e^-8	4.174e^-4	INTRON rdgA
2R	1024229	2R_1024229_SNP [dm3] 2R_5136724_SNP [dm6]	C	T	1.608e^-8	4.174e^-4	INTERGENIC	transposable element FlyBase
2R	1024243	2R_1024243_SNP [dm3] 2R_5136738_SNP [dm6]	C	A	1.608e^-8	4.174e^-4	INTERGENIC	transposable element FlyBase
2R	1027532	2R_1027532_SNP [dm3] 2R_5140027_SNP [dm6]	T	C	1.608e^-8	4.174e^-4	INTERGENIC
2R	1031474	2R_1031474_SNP [dm3] 2R_5143969_SNP [dm6]	C	G	1.608e^-8	4.174e^-4	UPSTREAM Atf6 INTERGENIC	transposable element FlyBase
3L	3468418	3L_3468418_SNP [dm3] 3L_3468418_SNP [dm6]	T	A	1.616e^-8	4.174e^-4	UTR_3_PRIME CG14971 DOWNSTREAM CycJ
2L	12765164	2L_12765164_SNP [dm3] 2L_12765164_SNP [dm6]	T	G	1.787e^-8	4.507e^-4	INTERGENIC
2R	19131156	2R_19131156_SNP [dm3] 2R_23243633_SNP [dm6]	G	T	1.823e^-8	4.507e^-4	DOWNSTREAM yip3 INTERGENIC
2L	4045651	2L_4045651_DEL [dm3] 2L_4045651_DEL [dm6]	TG	T	1.924e^-8	4.507e^-4	INTRON ed	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	4137890	X_4137890_DEL [dm3] X_4243857_DEL [dm6]	AAACAATATTTAA...	A	1.924e^-8	4.507e^-4	DOWNSTREAM Muc4B INTERGENIC
X	4137915	X_4137915_SNP [dm3] X_4243882_SNP [dm6]	A	C	1.924e^-8	4.507e^-4	DOWNSTREAM Muc4B INTERGENIC
3R	22811592	3R_22811592_SNP [dm3] 3R_26985870_SNP [dm6]	G	T	1.935e^-8	4.507e^-4	SYNONYMOUS_CODING CG31075 DOWNSTREAM CG14253	TF binding site mE1_TFBS_cad
X	4137957	X_4137957_DEL [dm3] X_4243924_DEL [dm6]	AGTTCG	A	1.963e^-8	4.507e^-4	DOWNSTREAM Muc4B INTERGENIC
2R	1031975	2R_1031975_SNP [dm3] 2R_5144470_SNP [dm6]	T	A	2.055e^-8	4.507e^-4	UPSTREAM Atf6 INTERGENIC	transposable element FlyBase
3R	23327567	3R_23327567_SNP [dm3] 3R_27501845_SNP [dm6]	T	A	2.085e^-8	4.507e^-4	NON_SYNONYMOUS_CODING CG43139 DOWNSTREAM CG5402
3R	23327635	3R_23327635_SNP [dm3] 3R_27501913_SNP [dm6]	G	C	2.085e^-8	4.507e^-4	NON_SYNONYMOUS_CODING CG43139 DOWNSTREAM CG5402
2R	1020872	2R_1020872_SNP [dm3] 2R_5133367_SNP [dm6]	A	T	2.156e^-8	4.507e^-4	INTERGENIC	transposable element FlyBase
2R	1027138	2R_1027138_SNP [dm3] 2R_5139633_SNP [dm6]	C	A	2.156e^-8	4.507e^-4	INTERGENIC	TF binding site mE1_TFBS_cad
2R	1035997	2R_1035997_SNP [dm3] 2R_5148492_SNP [dm6]	G	A	2.156e^-8	4.507e^-4	NON_SYNONYMOUS_CODING Atf6
2R	1036711	2R_1036711_SNP [dm3] 2R_5149206_SNP [dm6]	T	C	2.156e^-8	4.507e^-4	INTRON Atf6
2R	14489957	2R_14489957_SNP [dm3] 2R_18602452_SNP [dm6]	C	T	2.156e^-8	4.507e^-4	INTRON GEFmeso
X	15641956	X_15641956_SNP [dm3] X_15747923_SNP [dm6]	C	T	2.156e^-8	4.507e^-4	SYNONYMOUS_CODING Tcp-1zeta	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	19899677	X_19899677_SNP [dm3] X_20005644_SNP [dm6]	A	T	2.156e^-8	4.507e^-4	UTR_3_PRIME Dop2R
X	8809749	X_8809749_SNP [dm3] X_8915716_SNP [dm6]	A	G	2.292e^-8	4.628e^-4	INTRON rdgA
3L	15373417	3L_15373417_SNP [dm3] 3L_15380317_SNP [dm6]	G	T	2.334e^-8	4.628e^-4	INTERGENIC
3L	11950719	3L_11950719_SNP [dm3] 3L_11957619_SNP [dm6]	G	T	2.366e^-8	4.628e^-4	UTR_5_PRIME CG11570 UPSTREAM CG43294 DOWNSTREAM CG7248
2L	5662627	2L_5662627_SNP [dm3] 2L_5662627_SNP [dm6]	A	T	2.427e^-8	4.628e^-4	UPSTREAM Hsp60C & 1 other INTERGENIC
2R	10867349	2R_10867349_SNP [dm3] 2R_14979844_SNP [dm6]	A	T	2.512e^-8	4.628e^-4	UTR_3_PRIME ckn
X	4137932	X_4137932_SNP [dm3] X_4243899_SNP [dm6]	C	A	2.535e^-8	4.628e^-4	DOWNSTREAM Muc4B INTERGENIC
X	4137949	X_4137949_INS [dm3] X_4243916_INS [dm6]	G	GTT	2.535e^-8	4.628e^-4	DOWNSTREAM Muc4B INTERGENIC
X	4137951	X_4137951_INS [dm3] X_4243918_INS [dm6]	A	AT	2.535e^-8	4.628e^-4	DOWNSTREAM Muc4B INTERGENIC
X	4137954	X_4137954_SNP [dm3] X_4243921_SNP [dm6]	A	T	2.535e^-8	4.628e^-4	DOWNSTREAM Muc4B INTERGENIC
X	4137976	X_4137976_SNP [dm3] X_4243943_SNP [dm6]	G	C	2.535e^-8	4.628e^-4	DOWNSTREAM Muc4B INTERGENIC
3R	10739739	3R_10739739_SNP [dm3] 3R_14914017_SNP [dm6]	G	C	2.546e^-8	4.628e^-4	INTERGENIC
2R	15207720	2R_15207720_SNP [dm3] 2R_19320215_SNP [dm6]	C	A	2.623e^-8	4.628e^-4	INTRON Rgk1
2R	15207750	2R_15207750_SNP [dm3] 2R_19320245_SNP [dm6]	T	C	2.623e^-8	4.628e^-4	INTRON Rgk1
2R	15209990	2R_15209990_SNP [dm3] 2R_19322485_SNP [dm6]	C	T	2.623e^-8	4.628e^-4	INTRON Rgk1
2R	15209994	2R_15209994_SNP [dm3] 2R_19322489_SNP [dm6]	G	A	2.623e^-8	4.628e^-4	INTRON Rgk1
2R	15210127	2R_15210127_SNP [dm3] 2R_19322622_SNP [dm6]	C	T	2.623e^-8	4.628e^-4	INTRON Rgk1
3L	5285558	3L_5285558_SNP [dm3] 3L_5292458_SNP [dm6]	A	T	2.662e^-8	4.628e^-4	INTERGENIC
2R	11773047	2R_11773047_SNP [dm3] 2R_15885542_SNP [dm6]	G	A	2.683e^-8	4.628e^-4	INTRON sli	TF binding site mE1_TFBS_sens
3R	3419522	3R_3419522_SNP [dm3] 3R_7593800_SNP [dm6]	T	G	2.687e^-8	4.628e^-4	INTRON CG34127
3R	24786811	3R_24786811_SNP [dm3] 3R_28961089_SNP [dm6]	T	A	2.744e^-8	4.683e^-4	INTRON CG14521
2R	1021056	2R_1021056_SNP [dm3] 2R_5133551_SNP [dm6]	C	A	2.788e^-8	4.715e^-4	INTERGENIC	transposable element FlyBase
2R	19301842	2R_19301842_SNP [dm3] 2R_23414319_SNP [dm6]	C	G	2.999e^-8	5.026e^-4	INTRON CG9812
3L	18648833	3L_18648833_SNP [dm3] 3L_18655733_SNP [dm6]	C	T	3.032e^-8	5.036e^-4	INTRON MYPT-75D
2L	7946179	2L_7946179_SNP [dm3] 2L_7946179_SNP [dm6]	G	T	3.145e^-8	5.178e^-4	INTRON Snoo
2L	15029979	2L_15029979_SNP [dm3] 2L_15029979_SNP [dm6]	C	T	3.173e^-8	5.178e^-4	SPLICE_SITE_REGION GABA-B-R1 DOWNSTREAM CG33310 & 1 other INTRON GABA-B-R1
3R	25119727	3R_25119727_SNP [dm3] 3R_29294005_SNP [dm6]	G	A	3.430e^-8	5.550e^-4	UTR_3_PRIME CG14506	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3R	21630205	3R_21630205_SNP [dm3] 3R_25804483_SNP [dm6]	C	G	3.467e^-8	5.561e^-4	INTERGENIC
2L	3139051	2L_3139051_SNP [dm3] 2L_3139051_SNP [dm6]	C	T	3.593e^-8	5.713e^-4	INTRON toc
2R	1018870	2R_1018870_SNP [dm3] 2R_5131365_SNP [dm6]	C	T	3.743e^-8	5.902e^-4	INTERGENIC	transposable element FlyBase
2L	10400657	2L_10400657_SNP [dm3] 2L_10400657_SNP [dm6]	G	T	3.934e^-8	6.151e^-4	SYNONYMOUS_CODING Cnot4
3L	18646229	3L_18646229_SNP [dm3] 3L_18653129_SNP [dm6]	T	A	4.206e^-8	6.414e^-4	INTRON MYPT-75D
3L	18646230	3L_18646230_SNP [dm3] 3L_18653130_SNP [dm6]	C	T	4.206e^-8	6.414e^-4	INTRON MYPT-75D
3L	18646232	3L_18646232_SNP [dm3] 3L_18653132_SNP [dm6]	T	A	4.206e^-8	6.414e^-4	INTRON MYPT-75D
2L	986011	2L_986011_SNP [dm3] 2L_986011_SNP [dm6]	G	T	4.260e^-8	6.441e^-4	INTERGENIC	TF binding site mE1_TFBS_chinmo
X	17998578	X_17998578_SNP [dm3] X_18104545_SNP [dm6]	C	T	4.293e^-8	6.441e^-4	SYNONYMOUS_CODING CG7135	TF binding site mE1_TFBS_cad mE1_TFBS_eve mE1_TFBS_HSA mE1_TFBS_sens
2L	11296317	2L_11296317_DEL [dm3] 2L_11296317_DEL [dm6]	TT	T	4.440e^-8	6.609e^-4	INTERGENIC
2R	15207957	2R_15207957_INS [dm3] 2R_19320452_INS [dm6]	A	ATTTACCATTACCATTACCA...	4.595e^-8	6.784e^-4	INTRON Rgk1
2L	3924618	2L_3924618_SNP [dm3] 2L_3924618_SNP [dm6]	C	T	4.823e^-8	7.066e^-4	INTRON fred
3R	17136760	3R_17136760_SNP [dm3] 3R_21311038_SNP [dm6]	T	C	5.207e^-8	7.569e^-4	DOWNSTREAM Hsromega EXON Hsromega
3L	678218	3L_678218_SNP [dm3] 3L_678218_SNP [dm6]	C	T	5.289e^-8	7.572e^-4	NON_SYNONYMOUS_CODING CG17129
3R	5825499	3R_5825499_SNP [dm3] 3R_9999777_SNP [dm6]	T	A	5.291e^-8	7.572e^-4	UTR_3_PRIME CG5359 DOWNSTREAM CG5359 INTRON Spn85F	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2R	11160257	2R_11160257_SNP [dm3] 2R_15272752_SNP [dm6]	C	T	5.414e^-8	7.688e^-4	INTRON Trpm
2R	6304649	2R_6304649_SNP [dm3] 2R_10417144_SNP [dm6]	C	T	5.497e^-8	7.747e^-4	UPSTREAM CG42732 INTERGENIC	TF binding site mE1_TFBS_GATAe mE1_TFBS_HSA
2R	17397317	2R_17397317_DEL [dm3] 2R_21509812_DEL [dm6]	TTTTACGT	T	5.676e^-8	7.939e^-4	INTRON MESK2
X	19908515	X_19908515_SNP [dm3] X_20014482_SNP [dm6]	C	A	5.905e^-8	8.198e^-4	UPSTREAM Dop2R INTRON Dop2R
3R	27760358	3R_27760358_DEL [dm3] 3R_31934636_DEL [dm6]	AGCATCAAAACTTATAACTA...	A	5.970e^-8	8.227e^-4	INTRON heph
2L	5624936	2L_5624936_SNP [dm3] 2L_5624936_SNP [dm6]	A	G	6.136e^-8	8.394e^-4	INTERGENIC
3L	6271261	3L_6271261_SNP [dm3] 3L_6278161_SNP [dm6]	A	G	6.726e^-8	9.134e^-4	INTERGENIC
2R	6331614	2R_6331614_SNP [dm3] 2R_10444109_SNP [dm6]	T	A	7.377e^-8	9.904e^-4	UPSTREAM Galphao INTRON Galphao	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	7088957	3L_7088957_SNP [dm3] 3L_7095857_SNP [dm6]	A	T	7.400e^-8	9.904e^-4	INTRON form3	TF binding site BDTNP1_TFBS_da
3R	12519275	3R_12519275_SNP [dm3] 3R_16693553_SNP [dm6]	A	G	8.843e^-8	0.001	INTRON Ubx	regulatory region REDfly_CRMs
2R	11585565	2R_11585565_SNP [dm3] 2R_15698060_SNP [dm6]	A	T	8.943e^-8	0.001	DOWNSTREAM CG30080 & 2 others INTERGENIC	TF binding site mE1_TFBS_bab1
3L	18606241	3L_18606241_SNP [dm3] 3L_18613141_SNP [dm6]	A	T	9.584e^-8	0.001	SYNONYMOUS_CODING CG32199 INTRON CG4174 & 1 other	TF binding site mE1_TFBS_HSA
3R	20930743	3R_20930743_SNP [dm3] 3R_25105021_SNP [dm6]	A	T	9.584e^-8	0.001	SYNONYMOUS_CODING CG34027
2L	1139590	2L_1139590_SNP [dm3] 2L_1139590_SNP [dm6]	C	T	9.614e^-8	0.001	NON_SYNONYMOUS_CODING CG4577	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	10339932	3L_10339932_SNP [dm3] 3L_10346832_SNP [dm6]	T	C	9.614e^-8	0.001	INTERGENIC
X	21540417	X_21540417_SNP [dm3] X_21669390_SNP [dm6]	T	A	9.644e^-8	0.001	INTERGENIC
3R	3393442	3R_3393442_SNP [dm3] 3R_7567720_SNP [dm6]	A	G	1.053e^-7	0.001	INTERGENIC
3R	21722451	3R_21722451_SNP [dm3] 3R_25896729_SNP [dm6]	A	C	1.080e^-7	0.001	UPSTREAM MCO3 INTRON CG5948
3L	4626341	3L_4626341_SNP [dm3] 3L_4626341_SNP [dm6]	T	A	1.099e^-7	0.001	UPSTREAM Rpd3 & 1 other DOWNSTREAM CR45438 INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	12485197	2R_12485197_SNP [dm3] 2R_16597692_SNP [dm6]	A	G	1.112e^-7	0.001	INTRON CG8303
2L	18910367	2L_18910367_SNP [dm3] 2L_18910367_SNP [dm6]	C	T	1.114e^-7	0.001	INTERGENIC
3L	20795721	3L_20795721_SNP [dm3] 3L_20802621_SNP [dm6]	A	G	1.115e^-7	0.001	NON_SYNONYMOUS_CODING Spc105R
2L	1606380	2L_1606380_INS [dm3] 2L_1606380_INS [dm6]	T	TT	1.143e^-7	0.001	INTRON CG31935 & 1 other
3L	1339101	3L_1339101_SNP [dm3] 3L_1339101_SNP [dm6]	C	T	1.143e^-7	0.001	SYNONYMOUS_CODING l_3_02640 DOWNSTREAM CG2199
2L	16198338	2L_16198338_SNP [dm3] 2L_16198338_SNP [dm6]	C	T	1.189e^-7	0.001	INTERGENIC
2R	17723768	2R_17723768_SNP [dm3] 2R_21836263_SNP [dm6]	T	A	1.213e^-7	0.001	SYNONYMOUS_CODING CG4377
3L	18655191	3L_18655191_SNP [dm3] 3L_18662091_SNP [dm6]	C	G	1.234e^-7	0.001	INTRON MYPT-75D
2R	10862187	2R_10862187_SNP [dm3] 2R_14974682_SNP [dm6]	G	A	1.247e^-7	0.001	INTRON ckn	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_prd BDTNP1_TFBS_sna
2R	11862920	2R_11862920_SNP [dm3] 2R_15975415_SNP [dm6]	C	T	1.247e^-7	0.001	NON_SYNONYMOUS_CODING Strn-Mlck
2L	9043154	2L_9043154_SNP [dm3] 2L_9043154_SNP [dm6]	A	G	1.369e^-7	0.002	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	4720491	2L_4720491_SNP [dm3] 2L_4720491_SNP [dm6]	C	A	1.372e^-7	0.002	UTR_3_PRIME CG34351
3L	4614091	3L_4614091_SNP [dm3] 3L_4614091_SNP [dm6]	T	C	1.375e^-7	0.002	UPSTREAM Src64B INTRON Src64B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3L	271206	3L_271206_SNP [dm3] 3L_271206_SNP [dm6]	A	T	1.385e^-7	0.002	UTR_5_PRIME miple2 UPSTREAM miple2 DOWNSTREAM miple	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	18666490	3R_18666490_SNP [dm3] 3R_22840768_SNP [dm6]	T	A	1.403e^-7	0.002	INTERGENIC
3R	14370557	3R_14370557_SNP [dm3] 3R_18544835_SNP [dm6]	A	T	1.516e^-7	0.002	INTRON fru
3L	18686014	3L_18686014_SNP [dm3] 3L_18692914_SNP [dm6]	A	C	1.517e^-7	0.002	DOWNSTREAM CR43987 INTERGENIC
X	13244547	X_13244547_SNP [dm3] X_13350514_SNP [dm6]	G	T	1.570e^-7	0.002	INTERGENIC
X	15999596	X_15999596_DEL [dm3] X_16105563_DEL [dm6]	TTTAA	T	1.571e^-7	0.002	UPSTREAM CG42354 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk mE1_TFBS_zfh1
X	15999603	X_15999603_SNP [dm3] X_16105570_SNP [dm6]	A	C	1.571e^-7	0.002	UPSTREAM CG42354 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_cnc mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_ttk mE1_TFBS_zfh1
2R	1021839	2R_1021839_SNP [dm3] 2R_5134334_SNP [dm6]	C	G	1.586e^-7	0.002	INTERGENIC	transposable element FlyBase
2R	1021910	2R_1021910_SNP [dm3] 2R_5134405_SNP [dm6]	T	A	1.586e^-7	0.002	INTERGENIC	transposable element FlyBase
3L	15582582	3L_15582582_SNP [dm3] 3L_15589482_SNP [dm6]	C	G	1.589e^-7	0.002	UTR_5_PRIME RhoGAP71E	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	16049214	3L_16049214_SNP [dm3] 3L_16056114_SNP [dm6]	G	C	1.725e^-7	0.002	INTRON Mbs	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
3L	17405953	3L_17405953_SNP [dm3] 3L_17412853_SNP [dm6]	C	G	1.740e^-7	0.002	INTRON blot	TF binding site BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	5611006	2R_5611006_SNP [dm3] 2R_9723501_SNP [dm6]	G	A	1.752e^-7	0.002	INTRON sqa
3L	14474547	3L_14474547_SNP [dm3] 3L_14481447_SNP [dm6]	C	A	1.752e^-7	0.002	INTRON bbg
3L	14476306	3L_14476306_SNP [dm3] 3L_14483206_SNP [dm6]	C	T	1.752e^-7	0.002	INTRON bbg
3L	6241197	3L_6241197_SNP [dm3] 3L_6248097_SNP [dm6]	G	A	1.752e^-7	0.002	SYNONYMOUS_CODING Best2
3L	6241551	3L_6241551_SNP [dm3] 3L_6248451_SNP [dm6]	T	C	1.752e^-7	0.002	INTRON Best2
3L	6242114	3L_6242114_SNP [dm3] 3L_6249014_SNP [dm6]	T	C	1.752e^-7	0.002	INTRON Best2
3L	6244300	3L_6244300_SNP [dm3] 3L_6251200_SNP [dm6]	A	C	1.752e^-7	0.002	INTRON Best2
3L	6244986	3L_6244986_SNP [dm3] 3L_6251886_SNP [dm6]	A	G	1.752e^-7	0.002	SYNONYMOUS_CODING Best2
3L	6245089	3L_6245089_SNP [dm3] 3L_6251989_SNP [dm6]	A	T	1.752e^-7	0.002	INTRON Best2
3L	6245091	3L_6245091_SNP [dm3] 3L_6251991_SNP [dm6]	A	T	1.752e^-7	0.002	INTRON Best2
3L	6264230	3L_6264230_DEL [dm3] 3L_6271130_DEL [dm6]	GG	G	1.752e^-7	0.002	INTERGENIC
3L	6264301	3L_6264301_SNP [dm3] 3L_6271201_SNP [dm6]	T	G	1.752e^-7	0.002	INTERGENIC
3L	6264312	3L_6264312_SNP [dm3] 3L_6271212_SNP [dm6]	G	T	1.752e^-7	0.002	INTERGENIC
3L	6264330	3L_6264330_INS [dm3] 3L_6271230_INS [dm6]	T	TTT	1.752e^-7	0.002	INTERGENIC
3L	6264332	3L_6264332_SNP [dm3] 3L_6271232_SNP [dm6]	C	T	1.752e^-7	0.002	INTERGENIC
3L	6264335	3L_6264335_SNP [dm3] 3L_6271235_SNP [dm6]	G	A	1.752e^-7	0.002	INTERGENIC
3L	6264346	3L_6264346_SNP [dm3] 3L_6271246_SNP [dm6]	T	G	1.752e^-7	0.002	INTERGENIC
3L	6264378	3L_6264378_SNP [dm3] 3L_6271278_SNP [dm6]	A	T	1.752e^-7	0.002	INTERGENIC
3L	6264379	3L_6264379_SNP [dm3] 3L_6271279_SNP [dm6]	G	A	1.752e^-7	0.002	INTERGENIC
3L	6264519	3L_6264519_SNP [dm3] 3L_6271419_SNP [dm6]	T	C	1.752e^-7	0.002	INTERGENIC
3L	6265004	3L_6265004_SNP [dm3] 3L_6271904_SNP [dm6]	T	C	1.752e^-7	0.002	INTERGENIC	TF binding site mE1_TFBS_inv
3L	7212836	3L_7212836_SNP [dm3] 3L_7219736_SNP [dm6]	T	C	1.752e^-7	0.002	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17749611	2R_17749611_SNP [dm3] 2R_21862106_SNP [dm6]	T	G	1.775e^-7	0.002	DOWNSTREAM CG9294 INTERGENIC
2L	8343657	2L_8343657_DEL [dm3] 2L_8343657_DEL [dm6]	AGCTGGAGGAGCA...	A	1.786e^-7	0.002	CODON_DELETION CG14273 EXON CR45371
3R	7959933	3R_7959933_SNP [dm3] 3R_12134211_SNP [dm6]	T	A	1.827e^-7	0.002	INTERGENIC	TF binding site mE1_TFBS_inv
X	749623	X_749623_SNP [dm3] X_855590_SNP [dm6]	A	G	1.987e^-7	0.002	INTRON CG43867	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
2L	5647383	2L_5647383_SNP [dm3] 2L_5647383_SNP [dm6]	A	T	2.056e^-7	0.002	INTRON CG31646	TF binding site mE1_TFBS_cad
2L	12776114	2L_12776114_SNP [dm3] 2L_12776114_SNP [dm6]	T	A	2.090e^-7	0.002	INTERGENIC
3L	14473862	3L_14473862_SNP [dm3] 3L_14480762_SNP [dm6]	C	T	2.096e^-7	0.002	INTRON bbg
3R	25501373	3R_25501373_SNP [dm3] 3R_29675651_SNP [dm6]	C	G	2.109e^-7	0.002	UTR_5_PRIME Cap-D2 UPSTREAM Bub3	TF binding site BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3R	1758115	3R_1758115_INS [dm3] 3R_5932393_INS [dm6]	A	GACGTTTCTTGT...	2.179e^-7	0.002	INTRON CG34113
3L	6245100	3L_6245100_SNP [dm3] 3L_6252000_SNP [dm6]	T	A	2.208e^-7	0.002	SPLICE_SITE_REGION Best2 INTRON Best2
2R	9309216	2R_9309216_SNP [dm3] 2R_13421711_SNP [dm6]	C	T	2.210e^-7	0.002	SPLICE_SITE_REGION CG42321 INTRON CG42321
2R	19590890	2R_19590890_SNP [dm3] 2R_23703367_SNP [dm6]	T	C	2.218e^-7	0.002	SYNONYMOUS_CODING l_2_dtl UPSTREAM CG4091	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	4002700	2L_4002700_SNP [dm3] 2L_4002700_SNP [dm6]	C	T	2.225e^-7	0.002	INTERGENIC
3L	10788352	3L_10788352_SNP [dm3] 3L_10795252_SNP [dm6]	C	T	2.225e^-7	0.002	DOWNSTREAM CR44546 INTERGENIC
3L	2578835	3L_2578835_SNP [dm3] 3L_2578835_SNP [dm6]	A	G	2.225e^-7	0.002	INTRON msn	TF binding site BDTNP1_TFBS_twi
3R	19362225	3R_19362225_SNP [dm3] 3R_23536503_SNP [dm6]	G	T	2.225e^-7	0.002	SYNONYMOUS_CODING CG16732 DOWNSTREAM CG10168
2L	9043145	2L_9043145_SNP [dm3] 2L_9043145_SNP [dm6]	T	C	2.249e^-7	0.002	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	7954074	3R_7954074_SNP [dm3] 3R_12128352_SNP [dm6]	A	C	2.255e^-7	0.002	UPSTREAM CG4702 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	2240192	3R_2240192_SNP [dm3] 3R_6414470_SNP [dm6]	G	T	2.303e^-7	0.002	INTRON gpp	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2L	10387774	2L_10387774_SNP [dm3] 2L_10387774_SNP [dm6]	T	G	2.314e^-7	0.002	UPSTREAM da DOWNSTREAM mRpS7 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
3L	6264340	3L_6264340_SNP [dm3] 3L_6271240_SNP [dm6]	A	G	2.433e^-7	0.002	INTERGENIC
2R	11484099	2R_11484099_SNP [dm3] 2R_15596594_SNP [dm6]	C	T	2.527e^-7	0.002	INTERGENIC
2R	11862665	2R_11862665_SNP [dm3] 2R_15975160_SNP [dm6]	A	G	2.534e^-7	0.002	SYNONYMOUS_CODING Strn-Mlck
2R	6046654	2R_6046654_SNP [dm3] 2R_10159149_SNP [dm6]	A	G	2.574e^-7	0.002	UPSTREAM mlt INTRON KCNQ	TF binding site BDTNP1_TFBS_dl mE1_TFBS_Dll mE1_TFBS_HSA mE1_TFBS_Trl
3R	3416389	3R_3416389_SNP [dm3] 3R_7590667_SNP [dm6]	C	A	2.620e^-7	0.002	INTRON CG34127
2R	12444111	2R_12444111_SNP [dm3] 2R_16556606_SNP [dm6]	T	A	2.699e^-7	0.002	INTRON Syn2
3R	4053435	3R_4053435_SNP [dm3] 3R_8227713_SNP [dm6]	G	A	2.733e^-7	0.002	UPSTREAM CR45550 EXON CR45551
2R	7018538	2R_7018538_SNP [dm3] 2R_11131033_SNP [dm6]	C	G	2.760e^-7	0.002	INTERGENIC
3L	2578822	3L_2578822_SNP [dm3] 3L_2578822_SNP [dm6]	A	G	2.761e^-7	0.002	INTRON msn	TF binding site BDTNP1_TFBS_twi
3L	2578845	3L_2578845_SNP [dm3] 3L_2578845_SNP [dm6]	A	T	2.761e^-7	0.002	INTRON msn	TF binding site BDTNP1_TFBS_twi
3L	2578872	3L_2578872_SNP [dm3] 3L_2578872_SNP [dm6]	G	A	2.761e^-7	0.002	INTRON msn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
3L	2578878	3L_2578878_INS [dm3] 3L_2578878_INS [dm6]	T	TAAGTAACTATATACTA...	2.761e^-7	0.002	INTRON msn	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
3L	6264367	3L_6264367_SNP [dm3] 3L_6271267_SNP [dm6]	T	C	2.785e^-7	0.002	INTERGENIC
3L	20091651	3L_20091651_INS [dm3] 3L_20098551_INS [dm6]	A	AG	2.794e^-7	0.002	UTR_3_PRIME CG14186
X	20564528	X_20564528_SNP [dm3] X_20693501_SNP [dm6]	T	C	2.817e^-7	0.002	UPSTREAM run INTRON run	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_Trl
X	20566630	X_20566630_SNP [dm3] X_20695603_SNP [dm6]	A	G	2.817e^-7	0.002	INTRON run	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3L	6245098	3L_6245098_SNP [dm3] 3L_6251998_SNP [dm6]	A	T	2.842e^-7	0.002	INTRON Best2
3R	4362872	3R_4362872_SNP [dm3] 3R_8537150_SNP [dm6]	A	C	2.854e^-7	0.002	INTERGENIC
2R	19376237	2R_19376237_INS [dm3] 2R_23488714_INS [dm6]	A	AT	2.911e^-7	0.002	INTRON CG43795
3L	3344505	3L_3344505_SNP [dm3] 3L_3344505_SNP [dm6]	T	C	2.932e^-7	0.002	INTRON kst
3L	16315635	3L_16315635_SNP [dm3] 3L_16322535_SNP [dm6]	A	T	2.938e^-7	0.002	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	6043916	2R_6043916_SNP [dm3] 2R_10156411_SNP [dm6]	T	C	2.960e^-7	0.002	UTR_3_PRIME mlt INTRON KCNQ	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	18734083	3R_18734083_SNP [dm3] 3R_22908361_SNP [dm6]	A	T	3.001e^-7	0.002	INTRON klg
3L	4614072	3L_4614072_SNP [dm3] 3L_4614072_SNP [dm6]	G	A	3.012e^-7	0.002	UPSTREAM Src64B INTRON Src64B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3L	4614078	3L_4614078_SNP [dm3] 3L_4614078_SNP [dm6]	C	G	3.012e^-7	0.002	UPSTREAM Src64B INTRON Src64B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3R	2240193	3R_2240193_SNP [dm3] 3R_6414471_SNP [dm6]	A	T	3.020e^-7	0.002	INTRON gpp	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	16762226	2R_16762226_SNP [dm3] 2R_20874721_SNP [dm6]	G	A	3.036e^-7	0.002	UTR_5_PRIME Ipk1 INTRON Ipk1
2R	16762272	2R_16762272_SNP [dm3] 2R_20874767_SNP [dm6]	G	T	3.036e^-7	0.002	INTRON Ipk1
2R	16764756	2R_16764756_SNP [dm3] 2R_20877251_SNP [dm6]	C	A	3.036e^-7	0.002	SPLICE_SITE_REGION Ipk1 INTRON Ipk1
2R	1084656	2R_1084656_SNP [dm3] 2R_5197151_SNP [dm6]	G	T	3.054e^-7	0.002	INTRON Nipped-A	transposable element FlyBase
2R	17868827	2R_17868827_SNP [dm3] 2R_21981322_SNP [dm6]	C	T	3.158e^-7	0.002	DOWNSTREAM Gr58a INTERGENIC
2L	207210	2L_207210_SNP [dm3] 2L_207210_SNP [dm6]	A	T	3.178e^-7	0.002	UTR_5_PRIME Tbc1d15-17 UPSTREAM Tbc1d15-17 & 1 other INTRON CG11617	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	15207761	2R_15207761_SNP [dm3] 2R_19320256_SNP [dm6]	T	C	3.296e^-7	0.002	INTRON Rgk1
3L	6231961	3L_6231961_DEL [dm3] 3L_6238861_DEL [dm6]	TATC	T	3.331e^-7	0.002	INTRON CG10226
3L	258162	3L_258162_SNP [dm3] 3L_258162_SNP [dm6]	C	T	3.351e^-7	0.002	UPSTREAM wac & 1 other DOWNSTREAM Tudor-SN INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
3L	260211	3L_260211_SNP [dm3] 3L_260211_SNP [dm6]	A	T	3.351e^-7	0.002	INTRON Tudor-SN EXON snoRNA:Tudor-SN-a	TF binding site mE1_TFBS_sens
2L	12813045	2L_12813045_SNP [dm3] 2L_12813045_SNP [dm6]	T	G	3.432e^-7	0.003	INTERGENIC	TF binding site BDTNP1_TFBS_twi
2R	13491871	2R_13491871_SNP [dm3] 2R_17604366_SNP [dm6]	C	T	3.433e^-7	0.003	UTR_3_PRIME lack UPSTREAM tRNA:CR30231 DOWNSTREAM tRNA:CR30333 & 2 others
3L	6259158	3L_6259158_SNP [dm3] 3L_6266058_SNP [dm6]	A	T	3.484e^-7	0.003	INTERGENIC
3L	12225185	3L_12225185_DEL [dm3] 3L_12232085_DEL [dm6]	CATTGG	A	3.505e^-7	0.003	INTRON app
2R	6847830	2R_6847830_SNP [dm3] 2R_10960325_SNP [dm6]	A	G	3.584e^-7	0.003	INTERGENIC
3L	3312755	3L_3312755_SNP [dm3] 3L_3312755_SNP [dm6]	T	C	3.647e^-7	0.003	SPLICE_SITE_REGION ZnT63C INTRON ZnT63C	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	12607525	3L_12607525_SNP [dm3] 3L_12614425_SNP [dm6]	G	A	3.734e^-7	0.003	INTRON caup	TF binding site mE1_TFBS_Stat92E
3L	16310860	3L_16310860_SNP [dm3] 3L_16317760_SNP [dm6]	T	C	3.796e^-7	0.003	UPSTREAM Nplp3 INTERGENIC
X	717095	X_717095_DEL [dm3] X_823062_DEL [dm6]	GGG	G	3.859e^-7	0.003	INTRON CG43867
3L	6257597	3L_6257597_SNP [dm3] 3L_6264497_SNP [dm6]	T	C	3.971e^-7	0.003	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_Trl mE1_TFBS_zfh1
3L	3486481	3L_3486481_SNP [dm3] 3L_3486481_SNP [dm6]	G	A	4.007e^-7	0.003	INTRON CG42324
2L	990403	2L_990403_DEL [dm3] 2L_990403_DEL [dm6]	GTGTATATG	G	4.015e^-7	0.003	INTRON CR44801
X	12416461	X_12416461_SNP [dm3] X_12522428_SNP [dm6]	G	A	4.018e^-7	0.003	SYNONYMOUS_CODING CG43921 UTR_5_PRIME CG43921
2R	2784461	2R_2784461_SNP [dm3] 2R_6896956_SNP [dm6]	T	C	4.021e^-7	0.003	INTRON CG30158	TF binding site mE1_TFBS_chinmo
3R	3161953	3R_3161953_SNP [dm3] 3R_7336231_SNP [dm6]	T	G	4.054e^-7	0.003	INTERGENIC
3R	23745267	3R_23745267_SNP [dm3] 3R_27919545_SNP [dm6]	C	A	4.350e^-7	0.003	UPSTREAM CG33213 DOWNSTREAM CG12259 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb mE1_TFBS_HSA
2R	6761120	2R_6761120_SNP [dm3] 2R_10873615_SNP [dm6]	C	G	4.603e^-7	0.003	INTRON CG30015	TF binding site BDTNP1_TFBS_dl
3L	14039455	3L_14039455_SNP [dm3] 3L_14046355_SNP [dm6]	C	A	4.652e^-7	0.003	SYNONYMOUS_CODING blue	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3L	14480424	3L_14480424_SNP [dm3] 3L_14487324_SNP [dm6]	C	T	4.652e^-7	0.003	INTRON bbg
3L	14480633	3L_14480633_SNP [dm3] 3L_14487533_SNP [dm6]	A	G	4.652e^-7	0.003	INTRON bbg
3L	14482147	3L_14482147_SNP [dm3] 3L_14489047_SNP [dm6]	A	C	4.652e^-7	0.003	INTRON bbg	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	14482281	3L_14482281_SNP [dm3] 3L_14489181_SNP [dm6]	G	T	4.652e^-7	0.003	INTRON bbg	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	14484608	3L_14484608_SNP [dm3] 3L_14491508_SNP [dm6]	A	C	4.652e^-7	0.003	INTRON bbg	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
2R	15207525	2R_15207525_DEL [dm3] 2R_19320020_DEL [dm6]	AA	A	4.711e^-7	0.003	INTRON Rgk1
2L	15033071	2L_15033071_SNP [dm3] 2L_15033071_SNP [dm6]	G	A	4.779e^-7	0.003	UTR_3_PRIME GABA-B-R1
3R	24392224	3R_24392224_SNP [dm3] 3R_28566502_SNP [dm6]	G	A	4.837e^-7	0.003	INTERGENIC	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	8809765	X_8809765_SNP [dm3] X_8915732_SNP [dm6]	T	C	4.942e^-7	0.003	INTRON rdgA
X	8809773	X_8809773_SNP [dm3] X_8915740_SNP [dm6]	T	A	4.942e^-7	0.003	INTRON rdgA
3L	7088913	3L_7088913_SNP [dm3] 3L_7095813_SNP [dm6]	A	G	4.966e^-7	0.003	INTRON form3	TF binding site BDTNP1_TFBS_da
2R	1046287	2R_1046287_SNP [dm3] 2R_5158782_SNP [dm6]	G	A	4.969e^-7	0.003	INTERGENIC	transposable element FlyBase
3L	6645410	3L_6645410_SNP [dm3] 3L_6652310_SNP [dm6]	T	C	4.969e^-7	0.003	INTERGENIC
3L	12069433	3L_12069433_SNP [dm3] 3L_12076333_SNP [dm6]	C	T	4.992e^-7	0.003	INTRON Sema-5c
2L	5880221	2L_5880221_SNP [dm3] 2L_5880221_SNP [dm6]	C	G	5.034e^-7	0.003	UPSTREAM rau INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2L	14696348	2L_14696348_SNP [dm3] 2L_14696348_SNP [dm6]	A	C	5.065e^-7	0.003	INTERGENIC
2R	4446014	2R_4446014_SNP [dm3] 2R_8558509_SNP [dm6]	T	C	5.080e^-7	0.003	EXON CR45308
3R	16116609	3R_16116609_SNP [dm3] 3R_20290887_SNP [dm6]	T	A	5.098e^-7	0.003	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
3R	1592191	3R_1592191_SNP [dm3] 3R_5766469_SNP [dm6]	A	T	5.125e^-7	0.003	INTRON CG2082
X	12404466	X_12404466_SNP [dm3] X_12510433_SNP [dm6]	C	G	5.147e^-7	0.003	INTRON CG2556
X	12404475	X_12404475_MNP [dm3] X_12510442_MNP [dm6]	TTT	AAC	5.147e^-7	0.003	INTRON CG2556
X	12404479	X_12404479_SNP [dm3] X_12510446_SNP [dm6]	T	C	5.147e^-7	0.003	INTRON CG2556
3R	5806070	3R_5806070_SNP [dm3] 3R_9980348_SNP [dm6]	T	A	5.415e^-7	0.003	INTRON Glut4EF
3L	21947357	3L_21947357_SNP [dm3] 3L_21954257_SNP [dm6]	G	A	5.512e^-7	0.003	UPSTREAM CG7458 INTERGENIC
3R	10950739	3R_10950739_DEL [dm3] 3R_15125017_DEL [dm6]	TT	T	5.542e^-7	0.003	INTRON CG42788
3L	14479217	3L_14479217_SNP [dm3] 3L_14486117_SNP [dm6]	T	A	5.584e^-7	0.004	INTRON bbg
3R	27143329	3R_27143329_SNP [dm3] 3R_31317607_SNP [dm6]	A	C	5.655e^-7	0.004	INTRON CG34347
3R	16116619	3R_16116619_SNP [dm3] 3R_20290897_SNP [dm6]	G	T	5.725e^-7	0.004	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
3R	20031994	3R_20031994_SNP [dm3] 3R_24206272_SNP [dm6]	T	G	5.726e^-7	0.004	INTRON twin	TF binding site mE1_TFBS_inv
2R	15212913	2R_15212913_SNP [dm3] 2R_19325408_SNP [dm6]	T	C	5.793e^-7	0.004	START_GAINED Rgk1 UTR_5_PRIME Rgk1 INTRON Rgk1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
2R	6828070	2R_6828070_SNP [dm3] 2R_10940565_SNP [dm6]	A	G	5.812e^-7	0.004	SYNONYMOUS_CODING Spn47C
3L	14484792	3L_14484792_SNP [dm3] 3L_14491692_SNP [dm6]	T	A	5.922e^-7	0.004	INTRON bbg	TF binding site BDTNP1_TFBS_da mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_HSA
3L	5076292	3L_5076292_SNP [dm3] 3L_5076292_SNP [dm6]	G	A	5.942e^-7	0.004	INTRON Con
3L	11958697	3L_11958697_SNP [dm3] 3L_11965597_SNP [dm6]	A	C	6.003e^-7	0.004	INTRON prc
2R	16764707	2R_16764707_SNP [dm3] 2R_20877202_SNP [dm6]	A	T	6.093e^-7	0.004	INTRON Ipk1
2R	6821593	2R_6821593_SNP [dm3] 2R_10934088_SNP [dm6]	G	A	6.141e^-7	0.004	INTERGENIC
3R	4366792	3R_4366792_SNP [dm3] 3R_8541070_SNP [dm6]	T	C	6.149e^-7	0.004	INTERGENIC
2R	4268468	2R_4268468_SNP [dm3] 2R_8380963_SNP [dm6]	G	A	6.268e^-7	0.004	INTRON pdm3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2L	3110736	2L_3110736_SNP [dm3] 2L_3110736_SNP [dm6]	T	A	6.277e^-7	0.004	UTR_3_PRIME PpD6 INTRON toc
X	9096670	X_9096670_SNP [dm3] X_9202637_SNP [dm6]	A	G	6.340e^-7	0.004	UPSTREAM su_r_ INTERGENIC
2R	12487943	2R_12487943_SNP [dm3] 2R_16600438_SNP [dm6]	T	C	6.369e^-7	0.004	DOWNSTREAM CG5089 INTRON CG8303
2R	12487956	2R_12487956_SNP [dm3] 2R_16600451_SNP [dm6]	T	A	6.369e^-7	0.004	DOWNSTREAM CG5089 INTRON CG8303
X	12404467	X_12404467_SNP [dm3] X_12510434_SNP [dm6]	T	C	6.457e^-7	0.004	INTRON CG2556
X	7998307	X_7998307_SNP [dm3] X_8104274_SNP [dm6]	A	G	6.565e^-7	0.004	SYNONYMOUS_CODING Gclc	TF binding site mE1_TFBS_chinmo
X	16850744	X_16850744_SNP [dm3] X_16956711_SNP [dm6]	T	G	6.732e^-7	0.004	UTR_3_PRIME CG9086 DOWNSTREAM CG9086 & 1 other	TF binding site BDTNP1_TFBS_dl
3R	3195560	3R_3195560_SNP [dm3] 3R_7369838_SNP [dm6]	C	A	6.806e^-7	0.004	UPSTREAM MstProx INTERGENIC
3L	3659674	3L_3659674_DEL [dm3] 3L_3659674_DEL [dm6]	TTTATTTTTGCAGTTTTGCT...	T	6.919e^-7	0.004	UTR_3_PRIME CG43098
3R	1902836	3R_1902836_SNP [dm3] 3R_6077114_SNP [dm6]	T	A	6.952e^-7	0.004	INTRON Or83c
3L	4625700	3L_4625700_INS [dm3] 3L_4625700_INS [dm6]	T	TCATAGGC	7.153e^-7	0.004	DOWNSTREAM CR45438 INTRON Src64B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_disco mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	12607636	3L_12607636_SNP [dm3] 3L_12614536_SNP [dm6]	A	C	7.241e^-7	0.004	INTRON caup	TF binding site mE1_TFBS_HSA mE1_TFBS_Stat92E
3R	4366756	3R_4366756_SNP [dm3] 3R_8541034_SNP [dm6]	T	G	7.636e^-7	0.004	INTERGENIC
3L	11955668	3L_11955668_SNP [dm3] 3L_11962568_SNP [dm6]	A	T	7.684e^-7	0.004	SYNONYMOUS_CODING prc	TF binding site mE1_TFBS_chinmo
3L	14480760	3L_14480760_SNP [dm3] 3L_14487660_SNP [dm6]	A	T	7.775e^-7	0.004	INTRON bbg
3L	14480825	3L_14480825_SNP [dm3] 3L_14487725_SNP [dm6]	G	A	7.775e^-7	0.004	INTRON bbg
3L	14480829	3L_14480829_SNP [dm3] 3L_14487729_SNP [dm6]	T	A	7.775e^-7	0.004	INTRON bbg
3R	2058260	3R_2058260_SNP [dm3] 3R_6232538_SNP [dm6]	G	T	7.867e^-7	0.004	INTERGENIC
2R	7078684	2R_7078684_DEL [dm3] 2R_11191179_DEL [dm6]	GTG	G	7.867e^-7	0.004	INTRON shn	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
2L	12112481	2L_12112481_SNP [dm3] 2L_12112481_SNP [dm6]	T	C	7.893e^-7	0.004	DOWNSTREAM Phae2 INTERGENIC
3R	4366774	3R_4366774_SNP [dm3] 3R_8541052_SNP [dm6]	G	A	8.051e^-7	0.005	INTERGENIC
2L	6639822	2L_6639822_SNP [dm3] 2L_6639822_SNP [dm6]	G	A	8.097e^-7	0.005	NON_SYNONYMOUS_CODING CG31635	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
2L	10150006	2L_10150006_SNP [dm3] 2L_10150006_SNP [dm6]	A	T	8.101e^-7	0.005	INTRON CG44153 & 1 other
3L	6622961	3L_6622961_SNP [dm3] 3L_6629861_SNP [dm6]	A	T	8.148e^-7	0.005	INTRON GluRIA
3R	16116563	3R_16116563_SNP [dm3] 3R_20290841_SNP [dm6]	T	A	8.433e^-7	0.005	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
3L	5083305	3L_5083305_SNP [dm3] 3L_5083305_SNP [dm6]	T	G	8.484e^-7	0.005	INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3L	6245073	3L_6245073_SNP [dm3] 3L_6251973_SNP [dm6]	A	G	8.578e^-7	0.005	INTRON Best2
3L	4388061	3L_4388061_SNP [dm3] 3L_4388061_SNP [dm6]	T	A	8.599e^-7	0.005	INTRON slow
3L	4389221	3L_4389221_SNP [dm3] 3L_4389221_SNP [dm6]	C	A	8.599e^-7	0.005	INTRON slow	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	4389241	3L_4389241_SNP [dm3] 3L_4389241_SNP [dm6]	G	A	8.599e^-7	0.005	INTRON slow	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	4389252	3L_4389252_INS [dm3] 3L_4389252_INS [dm6]	A	CG	8.599e^-7	0.005	INTRON slow	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	4389263	3L_4389263_SNP [dm3] 3L_4389263_SNP [dm6]	T	A	8.599e^-7	0.005	INTRON slow	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	4389296	3L_4389296_DEL [dm3] 3L_4389296_DEL [dm6]	CATTCTATTG	C	8.599e^-7	0.005	INTRON slow	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
3L	4392048	3L_4392048_SNP [dm3] 3L_4392048_SNP [dm6]	T	G	8.599e^-7	0.005	INTRON slow	TF binding site mE1_TFBS_cad
3L	4392536	3L_4392536_SNP [dm3] 3L_4392536_SNP [dm6]	C	A	8.599e^-7	0.005	INTRON slow
3L	4393856	3L_4393856_SNP [dm3] 3L_4393856_SNP [dm6]	G	A	8.599e^-7	0.005	INTRON slow
3R	2311050	3R_2311050_SNP [dm3] 3R_6485328_SNP [dm6]	A	T	8.628e^-7	0.005	INTRON CG15186
3L	18068088	3L_18068088_SNP [dm3] 3L_18074988_SNP [dm6]	T	A	8.701e^-7	0.005	EXON CR45391
X	8809777	X_8809777_SNP [dm3] X_8915744_SNP [dm6]	G	T	8.849e^-7	0.005	INTRON rdgA
2R	16766725	2R_16766725_SNP [dm3] 2R_20879220_SNP [dm6]	C	T	8.919e^-7	0.005	UPSTREAM Cib2 DOWNSTREAM Ipk1 INTERGENIC
3L	14761593	3L_14761593_SNP [dm3] 3L_14768493_SNP [dm6]	C	G	8.934e^-7	0.005	SYNONYMOUS_CODING CG17173 DOWNSTREAM CG9384 & 1 other	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	21825160	3R_21825160_SNP [dm3] 3R_25999438_SNP [dm6]	A	C	9.017e^-7	0.005	UPSTREAM E_spl_mgamma-HLH DOWNSTREAM E_spl_mdelta-HLH INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2R	7443254	2R_7443254_SNP [dm3] 2R_11555749_SNP [dm6]	C	A	9.067e^-7	0.005	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
X	715205	X_715205_SNP [dm3] X_821172_SNP [dm6]	C	T	9.279e^-7	0.005	SYNONYMOUS_CODING CG43867	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	5548781	2L_5548781_SNP [dm3] 2L_5548781_SNP [dm6]	G	C	9.479e^-7	0.005	UTR_3_PRIME Oscillin DOWNSTREAM CG14014 INTRON Oscillin
3L	20825167	3L_20825167_INS [dm3] 3L_20832067_INS [dm6]	A	ATTTATTTATAACG...	9.488e^-7	0.005	INTRON Pka-R1
2L	5107266	2L_5107266_SNP [dm3] 2L_5107266_SNP [dm6]	G	C	9.582e^-7	0.005	INTRON Msp300	TF binding site mE1_TFBS_Trl
3R	3345135	3R_3345135_DEL [dm3] 3R_7519413_DEL [dm6]	AA	A	9.613e^-7	0.005	UTR_5_PRIME Ubc84D DOWNSTREAM alpha-Est7
3L	5076687	3L_5076687_SNP [dm3] 3L_5076687_SNP [dm6]	A	G	9.691e^-7	0.005	INTRON Con
3L	5076709	3L_5076709_SNP [dm3] 3L_5076709_SNP [dm6]	T	C	9.691e^-7	0.005	INTRON Con
3R	2025838	3R_2025838_SNP [dm3] 3R_6200116_SNP [dm6]	G	A	9.712e^-7	0.005	INTRON Osi24
3L	12666791	3L_12666791_SNP [dm3] 3L_12673691_SNP [dm6]	C	A	9.846e^-7	0.005	INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	2111925	3R_2111925_SNP [dm3] 3R_6286203_SNP [dm6]	A	T	9.854e^-7	0.005	INTERGENIC
3R	2112074	3R_2112074_SNP [dm3] 3R_6286352_SNP [dm6]	C	T	9.854e^-7	0.005	INTERGENIC
3R	2112107	3R_2112107_SNP [dm3] 3R_6286385_SNP [dm6]	G	A	9.854e^-7	0.005	INTERGENIC
3R	2112123	3R_2112123_SNP [dm3] 3R_6286401_SNP [dm6]	C	A	1.010e^-6	0.005	INTERGENIC
2L	21920804	2L_21920804_SNP [dm3] 2L_21920804_SNP [dm6]	T	G	1.016e^-6	0.005	DOWNSTREAM CG11634 INTERGENIC
2L	1408866	2L_1408866_SNP [dm3] 2L_1408866_SNP [dm6]	G	T	1.019e^-6	0.005	INTRON lea	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_inv
3L	5067884	3L_5067884_SNP [dm3] 3L_5067884_SNP [dm6]	A	T	1.031e^-6	0.005	INTRON Con
3L	16417565	3L_16417565_SNP [dm3] 3L_16424465_SNP [dm6]	C	T	1.061e^-6	0.005	INTRON CG33158 & 1 other	TF binding site BDTNP1_TFBS_twi
3L	4388056	3L_4388056_SNP [dm3] 3L_4388056_SNP [dm6]	T	C	1.068e^-6	0.005	INTRON slow
3L	5379452	3L_5379452_SNP [dm3] 3L_5386352_SNP [dm6]	T	C	1.068e^-6	0.005	INTERGENIC
3L	6262108	3L_6262108_SNP [dm3] 3L_6269008_SNP [dm6]	C	T	1.082e^-6	0.005	INTERGENIC
2L	3975492	2L_3975492_SNP [dm3] 2L_3975492_SNP [dm6]	T	A	1.094e^-6	0.005	INTRON fred
3R	12783001	3R_12783001_SNP [dm3] 3R_16957279_SNP [dm6]	A	G	1.106e^-6	0.006	INTRON Abd-B	TF binding site mE1_TFBS_bab1
3R	19264195	3R_19264195_SNP [dm3] 3R_23438473_SNP [dm6]	C	T	1.106e^-6	0.006	INTRON CG4374	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	19365789	2R_19365789_INS [dm3] 2R_23478266_INS [dm6]	GC	TAA	1.116e^-6	0.006	UPSTREAM CR43793 INTRON CG43795
3L	18070150	3L_18070150_SNP [dm3] 3L_18077050_SNP [dm6]	A	G	1.122e^-6	0.006	UPSTREAM CR45392 INTERGENIC
2L	15031093	2L_15031093_SNP [dm3] 2L_15031093_SNP [dm6]	T	C	1.131e^-6	0.006	SYNONYMOUS_CODING CG31832 INTRON GABA-B-R1
2R	11845302	2R_11845302_SNP [dm3] 2R_15957797_SNP [dm6]	C	T	1.137e^-6	0.006	UPSTREAM Strn-Mlck INTRON Strn-Mlck	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
X	10665901	X_10665901_SNP [dm3] X_10771868_SNP [dm6]	G	A	1.140e^-6	0.006	UTR_3_PRIME BTBD9 UPSTREAM CG15211 DOWNSTREAM BTBD9	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
2R	2716776	2R_2716776_SNP [dm3] 2R_6829271_SNP [dm6]	A	G	1.161e^-6	0.006	INTRON CG15236	TF binding site mE1_TFBS_chinmo
2L	8920808	2L_8920808_SNP [dm3] 2L_8920808_SNP [dm6]	C	T	1.199e^-6	0.006	INTRON CG34398
3R	1765743	3R_1765743_DEL [dm3] 3R_5940021_DEL [dm6]	TTTAAGTGGATTAATAAGTA...	T	1.207e^-6	0.006	INTRON CG34113
2R	12576939	2R_12576939_SNP [dm3] 2R_16689434_SNP [dm6]	C	T	1.218e^-6	0.006	INTRON CG30463
3R	1759069	3R_1759069_SNP [dm3] 3R_5933347_SNP [dm6]	C	A	1.237e^-6	0.006	INTRON CG34113
3L	14115804	3L_14115804_SNP [dm3] 3L_14122704_SNP [dm6]	C	T	1.259e^-6	0.006	INTRON Sox21b
X	897555	X_897555_SNP [dm3] X_1003522_SNP [dm6]	C	G	1.274e^-6	0.006	INTERGENIC
X	897568	X_897568_SNP [dm3] X_1003535_SNP [dm6]	T	C	1.274e^-6	0.006	INTERGENIC
3L	12451042	3L_12451042_SNP [dm3] 3L_12457942_SNP [dm6]	T	C	1.283e^-6	0.006	INTERGENIC
2L	9345312	2L_9345312_SNP [dm3] 2L_9345312_SNP [dm6]	C	T	1.303e^-6	0.006	DOWNSTREAM CG3748 INTERGENIC
2R	15209062	2R_15209062_SNP [dm3] 2R_19321557_SNP [dm6]	C	G	1.309e^-6	0.006	INTRON Rgk1	TF binding site mE1_TFBS_inv
3R	21722470	3R_21722470_SNP [dm3] 3R_25896748_SNP [dm6]	A	G	1.336e^-6	0.006	UPSTREAM MCO3 INTRON CG5948
X	6643129	X_6643129_SNP [dm3] X_6749096_SNP [dm6]	A	T	1.362e^-6	0.006	INTRON CG14439
3R	11000450	3R_11000450_SNP [dm3] 3R_15174728_SNP [dm6]	T	C	1.363e^-6	0.006	DOWNSTREAM Mf INTRON Mf & 1 other
3L	7886129	3L_7886129_SNP [dm3] 3L_7893029_SNP [dm6]	T	C	1.377e^-6	0.006	INTRON CG32365
2R	19370726	2R_19370726_SNP [dm3] 2R_23483203_SNP [dm6]	T	A	1.377e^-6	0.006	INTRON CG43795	TF binding site mE1_TFBS_chinmo
2R	19372995	2R_19372995_SNP [dm3] 2R_23485472_SNP [dm6]	G	A	1.377e^-6	0.006	INTRON CG43795
3L	2615029	3L_2615029_SNP [dm3] 3L_2615029_SNP [dm6]	C	G	1.382e^-6	0.006	INTRON Pxn	TF binding site mE1_TFBS_chinmo
2R	8891128	2R_8891128_SNP [dm3] 2R_13003623_SNP [dm6]	A	G	1.390e^-6	0.006	SYNONYMOUS_CODING Su_z_2	TF binding site mE1_TFBS_chinmo
3R	19757524	3R_19757524_SNP [dm3] 3R_23931802_SNP [dm6]	C	T	1.406e^-6	0.007	SYNONYMOUS_CODING CG13599 UPSTREAM Rpt2 DOWNSTREAM RpS19b	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Ubx
3R	21766437	3R_21766437_SNP [dm3] 3R_25940715_SNP [dm6]	T	A	1.406e^-6	0.007	INTRON CCAP-R
3L	5067841	3L_5067841_SNP [dm3] 3L_5067841_SNP [dm6]	G	A	1.419e^-6	0.007	INTRON Con
X	4490968	X_4490968_SNP [dm3] X_4596935_SNP [dm6]	T	C	1.425e^-6	0.007	INTRON CR32773	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
2L	10716310	2L_10716310_SNP [dm3] 2L_10716310_SNP [dm6]	C	T	1.430e^-6	0.007	INTERGENIC
2R	20080559	2R_20080559_SNP [dm3] 2R_24193036_SNP [dm6]	G	A	1.450e^-6	0.007	SYNONYMOUS_CODING ocm
3L	3294498	3L_3294498_SNP [dm3] 3L_3294498_SNP [dm6]	G	A	1.451e^-6	0.007	UPSTREAM CG12009 INTRON CG12009
3R	4367437	3R_4367437_SNP [dm3] 3R_8541715_SNP [dm6]	A	G	1.518e^-6	0.007	INTERGENIC
2R	7066958	2R_7066958_SNP [dm3] 2R_11179453_SNP [dm6]	G	T	1.523e^-6	0.007	INTRON shn
X	6531242	X_6531242_SNP [dm3] X_6637209_SNP [dm6]	C	A	1.526e^-6	0.007	INTRON pigs EXON CR44817	TF binding site BDTNP1_TFBS_prd mE1_TFBS_HSA
X	22287361	X_22287361_SNP [dm3] X_22885525_SNP [dm6]	G	A	1.549e^-6	0.007	UTR_3_PRIME CG42346
3L	6239428	3L_6239428_SNP [dm3] 3L_6246328_SNP [dm6]	T	A	1.562e^-6	0.007	UTR_3_PRIME Best2 UPSTREAM Mdr65
2R	19217353	2R_19217353_SNP [dm3] 2R_23329830_SNP [dm6]	C	A	1.571e^-6	0.007	NON_SYNONYMOUS_CODING CG30413	TF binding site BDTNP1_TFBS_dl
2L	12770724	2L_12770724_SNP [dm3] 2L_12770724_SNP [dm6]	C	T	1.583e^-6	0.007	INTERGENIC
2L	8698949	2L_8698949_SNP [dm3] 2L_8698949_SNP [dm6]	G	C	1.591e^-6	0.007	SYNONYMOUS_CODING Hnf4 INTRON Hnf4
3R	15954454	3R_15954454_SNP [dm3] 3R_20128732_SNP [dm6]	T	C	1.597e^-6	0.007	INTERGENIC
3R	16002809	3R_16002809_SNP [dm3] 3R_20177087_SNP [dm6]	G	T	1.597e^-6	0.007	INTERGENIC
2R	10348289	2R_10348289_SNP [dm3] 2R_14460784_SNP [dm6]	C	T	1.602e^-6	0.007	INTRON Oaz	TF binding site mE1_TFBS_cad
3L	12975444	3L_12975444_INS [dm3] 3L_12982344_INS [dm6]	A	AGACA	1.606e^-6	0.007	INTERGENIC
3R	7954076	3R_7954076_SNP [dm3] 3R_12128354_SNP [dm6]	G	T	1.615e^-6	0.007	UPSTREAM CG4702 INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3R	20266831	3R_20266831_DEL [dm3] 3R_24441109_DEL [dm6]	TAT	T	1.655e^-6	0.007	DOWNSTREAM CR43455 INTRON nAChRalpha1
X	20795597	X_20795597_DEL [dm3] X_20924570_DEL [dm6]	AAAATCAAAATTA...	A	1.707e^-6	0.008	UPSTREAM shakB INTRON shakB	TF binding site BDTNP1_TFBS_dl
2R	9265341	2R_9265341_DEL [dm3] 2R_13377836_DEL [dm6]	AA	A	1.717e^-6	0.008	UPSTREAM CG10814 INTERGENIC	TF binding site mE1_TFBS_chinmo
X	10856776	X_10856776_SNP [dm3] X_10962743_SNP [dm6]	C	T	1.724e^-6	0.008	SYNONYMOUS_CODING Myo10A	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo mE1_TFBS_HSA
X	18149806	X_18149806_SNP [dm3] X_18255773_SNP [dm6]	G	T	1.724e^-6	0.008	DOWNSTREAM CR45613 INTERGENIC
3L	20147197	3L_20147197_SNP [dm3] 3L_20154097_SNP [dm6]	T	C	1.729e^-6	0.008	SYNONYMOUS_CODING CG42674	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	25561711	3R_25561711_SNP [dm3] 3R_29735989_SNP [dm6]	T	A	1.752e^-6	0.008	UPSTREAM CG7598 DOWNSTREAM Kul INTRON CG7601	TF binding site mE1_TFBS_sens
2L	7984561	2L_7984561_SNP [dm3] 2L_7984561_SNP [dm6]	C	A	1.758e^-6	0.008	UTR_5_PRIME CG7231 UPSTREAM Snoo & 1 other	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	4993738	3L_4993738_SNP [dm3] 3L_4993738_SNP [dm6]	T	A	1.762e^-6	0.008	DOWNSTREAM CG32232 INTRON Con	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4993753	3L_4993753_SNP [dm3] 3L_4993753_SNP [dm6]	C	T	1.762e^-6	0.008	DOWNSTREAM CG32232 INTRON Con	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	17997739	3R_17997739_SNP [dm3] 3R_22172017_SNP [dm6]	G	C	1.762e^-6	0.008	INTRON SKIP	TF binding site mE1_TFBS_cad
3R	2995649	3R_2995649_SNP [dm3] 3R_7169927_SNP [dm6]	G	A	1.762e^-6	0.008	INTRON sas
3L	13645488	3L_13645488_SNP [dm3] 3L_13652388_SNP [dm6]	A	T	1.771e^-6	0.008	INTRON bru-3
3L	14288130	3L_14288130_SNP [dm3] 3L_14295030_SNP [dm6]	G	A	1.773e^-6	0.008	INTRON fz
2L	1006271	2L_1006271_SNP [dm3] 2L_1006271_SNP [dm6]	G	A	1.811e^-6	0.008	INTERGENIC	TF binding site mE1_TFBS_bab1 mE1_TFBS_cad mE1_TFBS_ttk
3R	8477772	3R_8477772_SNP [dm3] 3R_12652050_SNP [dm6]	C	G	1.812e^-6	0.008	NON_SYNONYMOUS_CODING Dtg	TF binding site mE1_TFBS_sens
3R	8477780	3R_8477780_SNP [dm3] 3R_12652058_SNP [dm6]	T	G	1.812e^-6	0.008	NON_SYNONYMOUS_CODING Dtg	TF binding site mE1_TFBS_sens
3R	8477805	3R_8477805_SNP [dm3] 3R_12652083_SNP [dm6]	G	A	1.812e^-6	0.008	NON_SYNONYMOUS_CODING Dtg	TF binding site mE1_TFBS_sens
3R	8477828	3R_8477828_SNP [dm3] 3R_12652106_SNP [dm6]	T	C	1.812e^-6	0.008	SYNONYMOUS_CODING Dtg	TF binding site mE1_TFBS_sens
3R	8477845	3R_8477845_SNP [dm3] 3R_12652123_SNP [dm6]	G	A	1.812e^-6	0.008	NON_SYNONYMOUS_CODING Dtg	TF binding site mE1_TFBS_sens
3R	14325920	3R_14325920_SNP [dm3] 3R_18500198_SNP [dm6]	A	G	1.840e^-6	0.008	INTRON fru
X	18293570	X_18293570_SNP [dm3] X_18399537_SNP [dm6]	C	G	1.843e^-6	0.008	DOWNSTREAM CG34328 INTRON CG32549
3L	14529395	3L_14529395_SNP [dm3] 3L_14536295_SNP [dm6]	C	T	1.847e^-6	0.008	UPSTREAM CG43246 & 1 other INTERGENIC
X	16012277	X_16012277_DEL [dm3] X_16118244_DEL [dm6]	ACT	A	1.863e^-6	0.008	UTR_3_PRIME disco-r DOWNSTREAM disco-r
2L	22081119	2L_22081119_SNP [dm3] 2L_22081119_SNP [dm6]	A	T	1.884e^-6	0.008	DOWNSTREAM ttm3 INTERGENIC	transposable element FlyBase
3R	25627275	3R_25627275_SNP [dm3] 3R_29801553_SNP [dm6]	C	T	1.913e^-6	0.008	UTR_3_PRIME Ice DOWNSTREAM CG7834
3R	16115031	3R_16115031_SNP [dm3] 3R_20289309_SNP [dm6]	C	A	1.952e^-6	0.008	SYNONYMOUS_CODING cic	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
3R	16115043	3R_16115043_SNP [dm3] 3R_20289321_SNP [dm6]	T	C	1.952e^-6	0.008	SYNONYMOUS_CODING cic	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2L	12770801	2L_12770801_SNP [dm3] 2L_12770801_SNP [dm6]	C	A	1.956e^-6	0.008	INTERGENIC
3L	11957739	3L_11957739_SNP [dm3] 3L_11964639_SNP [dm6]	A	T	1.998e^-6	0.008	SYNONYMOUS_CODING prc	TF binding site mE1_TFBS_chinmo
2L	7669149	2L_7669149_SNP [dm3] 2L_7669149_SNP [dm6]	T	A	1.998e^-6	0.008	INTRON Slob & 1 other
3L	22890565	3L_22890565_SNP [dm3] 3L_22897465_SNP [dm6]	C	A	2.075e^-6	0.008	DOWNSTREAM CR44688 & 1 other INTERGENIC
2L	12987898	2L_12987898_SNP [dm3] 2L_12987898_SNP [dm6]	T	C	2.082e^-6	0.008	INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	18853460	2L_18853460_SNP [dm3] 2L_18853460_SNP [dm6]	A	T	2.082e^-6	0.008	SPLICE_SITE_REGION CG17321 INTRON CG17321	TF binding site mE1_TFBS_cad
2L	18864569	2L_18864569_SNP [dm3] 2L_18864569_SNP [dm6]	T	G	2.082e^-6	0.008	INTRON tup
2L	18864574	2L_18864574_SNP [dm3] 2L_18864574_SNP [dm6]	C	T	2.082e^-6	0.008	INTRON tup
2L	3466560	2L_3466560_SNP [dm3] 2L_3466560_SNP [dm6]	A	C	2.082e^-6	0.008	UPSTREAM msl-2 DOWNSTREAM CG3238 INTRON Pdsw	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	6062579	2L_6062579_SNP [dm3] 2L_6062579_SNP [dm6]	C	A	2.082e^-6	0.008	UPSTREAM CG13994 DOWNSTREAM Fbw5 INTRON CG9140	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	7711535	2L_7711535_SNP [dm3] 2L_7711535_SNP [dm6]	G	A	2.082e^-6	0.008	UTR_5_PRIME Ntl DOWNSTREAM Tep3 INTRON Ntl & 1 other
2L	7711884	2L_7711884_SNP [dm3] 2L_7711884_SNP [dm6]	G	A	2.082e^-6	0.008	SYNONYMOUS_CODING Ntl DOWNSTREAM tRNA:Y1:28C
2R	14316322	2R_14316322_SNP [dm3] 2R_18428817_SNP [dm6]	G	A	2.082e^-6	0.008	SYNONYMOUS_CODING CG12263	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	14741371	2R_14741371_SNP [dm3] 2R_18853866_SNP [dm6]	C	T	2.082e^-6	0.008	SYNONYMOUS_CODING Jheh1 UPSTREAM CG18190	TF binding site mE1_TFBS_cad mE1_TFBS_sens
2R	15229198	2R_15229198_SNP [dm3] 2R_19341693_SNP [dm6]	A	G	2.082e^-6	0.008	UPSTREAM CG9975 INTRON Rgk1
2R	15229200	2R_15229200_SNP [dm3] 2R_19341695_SNP [dm6]	G	A	2.082e^-6	0.008	UPSTREAM CG9975 INTRON Rgk1
2R	15466293	2R_15466293_SNP [dm3] 2R_19578788_SNP [dm6]	G	C	2.082e^-6	0.008	INTRON sm
2R	19213364	2R_19213364_SNP [dm3] 2R_23325841_SNP [dm6]	G	C	2.082e^-6	0.008	NON_SYNONYMOUS_CODING CG9861 DOWNSTREAM CG30417	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
2R	19214231	2R_19214231_SNP [dm3] 2R_23326708_SNP [dm6]	G	A	2.082e^-6	0.008	NON_SYNONYMOUS_CODING CG9861 DOWNSTREAM CG30417	TF binding site mE1_TFBS_cad
2R	19217788	2R_19217788_SNP [dm3] 2R_23330265_SNP [dm6]	A	G	2.082e^-6	0.008	UPSTREAM CG30413 INTERGENIC
2R	20161452	2R_20161452_SNP [dm3] 2R_24273929_SNP [dm6]	C	T	2.082e^-6	0.008	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_chinmo
2R	20166819	2R_20166819_SNP [dm3] 2R_24279296_SNP [dm6]	T	C	2.082e^-6	0.008	INTRON nvy	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo
2R	5626104	2R_5626104_SNP [dm3] 2R_9738599_SNP [dm6]	T	G	2.082e^-6	0.008	INTRON sqa
2R	5626465	2R_5626465_SNP [dm3] 2R_9738960_SNP [dm6]	C	A	2.082e^-6	0.008	INTRON sqa
2R	5627174	2R_5627174_SNP [dm3] 2R_9739669_SNP [dm6]	G	A	2.082e^-6	0.008	INTRON sqa	TF binding site BDTNP1_TFBS_twi
2R	5627175	2R_5627175_SNP [dm3] 2R_9739670_SNP [dm6]	G	T	2.082e^-6	0.008	INTRON sqa	TF binding site BDTNP1_TFBS_twi
2R	5628530	2R_5628530_SNP [dm3] 2R_9741025_SNP [dm6]	C	T	2.082e^-6	0.008	INTRON sqa
2R	5630371	2R_5630371_SNP [dm3] 2R_9742866_SNP [dm6]	C	T	2.082e^-6	0.008	INTRON sqa
2R	5632539	2R_5632539_SNP [dm3] 2R_9745034_SNP [dm6]	A	T	2.082e^-6	0.008	UTR_5_PRIME sqa
2R	6018557	2R_6018557_SNP [dm3] 2R_10131052_SNP [dm6]	A	G	2.082e^-6	0.008	INTRON gem	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	6018558	2R_6018558_SNP [dm3] 2R_10131053_SNP [dm6]	T	G	2.082e^-6	0.008	INTRON gem	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	6018560	2R_6018560_SNP [dm3] 2R_10131055_SNP [dm6]	A	G	2.082e^-6	0.008	INTRON gem	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	6018564	2R_6018564_INS [dm3] 2R_10131059_INS [dm6]	C	CA	2.082e^-6	0.008	INTRON gem	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	8473568	2R_8473568_SNP [dm3] 2R_12586063_SNP [dm6]	C	T	2.082e^-6	0.008	UTR_5_PRIME Sin3A	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_Trl
2R	8475259	2R_8475259_SNP [dm3] 2R_12587754_SNP [dm6]	A	G	2.082e^-6	0.008	INTRON Sin3A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_Trl
3L	12699067	3L_12699067_SNP [dm3] 3L_12705967_SNP [dm6]	T	C	2.082e^-6	0.008	INTRON mirr	TF binding site BDTNP1_TFBS_da
3L	12975995	3L_12975995_SNP [dm3] 3L_12982895_SNP [dm6]	T	G	2.082e^-6	0.008	INTERGENIC
3L	12976003	3L_12976003_DEL [dm3] 3L_12982903_DEL [dm6]	CC	C	2.082e^-6	0.008	INTERGENIC
3L	1341481	3L_1341481_SNP [dm3] 3L_1341481_SNP [dm6]	G	T	2.082e^-6	0.008	SYNONYMOUS_CODING CG2199	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_sens
3L	1341493	3L_1341493_SNP [dm3] 3L_1341493_SNP [dm6]	A	T	2.082e^-6	0.008	SYNONYMOUS_CODING CG2199 DOWNSTREAM Ptp61F	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_z mE1_TFBS_sens
3L	16205317	3L_16205317_SNP [dm3] 3L_16212217_SNP [dm6]	C	G	2.082e^-6	0.008	DOWNSTREAM CG13073 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	16205356	3L_16205356_INS [dm3] 3L_16212256_INS [dm6]	TGTCTC	GAAAGAGA	2.082e^-6	0.008	DOWNSTREAM CG13073 INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	17436902	3L_17436902_SNP [dm3] 3L_17443802_SNP [dm6]	G	T	2.082e^-6	0.008	INTRON CG18265
3L	22752839	3L_22752839_DEL [dm3] 3L_22759739_DEL [dm6]	TTCAAACTTTACGCAGAATG...	T	2.082e^-6	0.008	UPSTREAM SPoCk INTRON SPoCk
3L	22752906	3L_22752906_SNP [dm3] 3L_22759806_SNP [dm6]	C	T	2.082e^-6	0.008	UPSTREAM SPoCk INTRON SPoCk
3L	6942907	3L_6942907_SNP [dm3] 3L_6949807_SNP [dm6]	A	T	2.082e^-6	0.008	UTR_3_PRIME CG10077 DOWNSTREAM tow
3L	7847876	3L_7847876_SNP [dm3] 3L_7854776_SNP [dm6]	C	T	2.082e^-6	0.008	UTR_5_PRIME Pdp1 INTRON Pdp1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Trl
3L	9381511	3L_9381511_SNP [dm3] 3L_9388411_SNP [dm6]	G	A	2.082e^-6	0.008	INTRON CG4080	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	9389047	3L_9389047_SNP [dm3] 3L_9395947_SNP [dm6]	C	T	2.082e^-6	0.008	INTRON CG4080	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	12648913	3R_12648913_SNP [dm3] 3R_16823191_SNP [dm6]	G	A	2.082e^-6	0.008	INTRON abd-A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3R	17197803	3R_17197803_SNP [dm3] 3R_21372081_SNP [dm6]	G	A	2.082e^-6	0.008	DOWNSTREAM mod_mdg4_ INTRON mod_mdg4_
3R	17198001	3R_17198001_SNP [dm3] 3R_21372279_SNP [dm6]	T	C	2.082e^-6	0.008	UTR_3_PRIME mod_mdg4_ INTRON mod_mdg4_
3R	17198134	3R_17198134_SNP [dm3] 3R_21372412_SNP [dm6]	C	T	2.082e^-6	0.008	UTR_3_PRIME mod_mdg4_ INTRON mod_mdg4_	TF binding site mE1_TFBS_cad
3R	21373978	3R_21373978_SNP [dm3] 3R_25548256_SNP [dm6]	G	A	2.082e^-6	0.008	INTRON msi
3R	21374095	3R_21374095_SNP [dm3] 3R_25548373_SNP [dm6]	A	C	2.082e^-6	0.008	INTRON msi
3R	8044430	3R_8044430_DEL [dm3] 3R_12218708_DEL [dm6]	GCCTATCTGC	G	2.082e^-6	0.008	INTRON CG4848	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
3R	9822798	3R_9822798_DEL [dm3] 3R_13997076_DEL [dm6]	TC	T	2.082e^-6	0.008	INTRON rdx
X	11323880	X_11323880_SNP [dm3] X_11429847_SNP [dm6]	A	T	2.082e^-6	0.008	UTR_3_PRIME Gs2 DOWNSTREAM Evi5
X	11418931	X_11418931_SNP [dm3] X_11524898_SNP [dm6]	A	G	2.082e^-6	0.008	INTRON Drak
X	14802174	X_14802174_SNP [dm3] X_14908141_SNP [dm6]	C	T	2.082e^-6	0.008	SYNONYMOUS_CODING CG9509 INTRON Flo2
X	15474225	X_15474225_SNP [dm3] X_15580192_SNP [dm6]	T	A	2.082e^-6	0.008	DOWNSTREAM CG7872 & 1 other INTERGENIC
X	16155305	X_16155305_SNP [dm3] X_16261272_SNP [dm6]	A	G	2.082e^-6	0.008	INTERGENIC
X	19899790	X_19899790_SNP [dm3] X_20005757_SNP [dm6]	T	A	2.082e^-6	0.008	UTR_3_PRIME Dop2R
X	6716484	X_6716484_SNP [dm3] X_6822451_SNP [dm6]	C	T	2.082e^-6	0.008	SYNONYMOUS_CODING CG4542 UPSTREAM Atx-1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	6716652	X_6716652_SNP [dm3] X_6822619_SNP [dm6]	C	T	2.082e^-6	0.008	NON_SYNONYMOUS_CODING CG4542 UPSTREAM Atx-1	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
X	6718109	X_6718109_SNP [dm3] X_6824076_SNP [dm6]	T	C	2.082e^-6	0.008	UTR_3_PRIME Atx-1 UPSTREAM nonC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
X	6718191	X_6718191_SNP [dm3] X_6824158_SNP [dm6]	C	T	2.082e^-6	0.008	UTR_3_PRIME Atx-1 UPSTREAM nonC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
X	6718314	X_6718314_SNP [dm3] X_6824281_SNP [dm6]	C	T	2.082e^-6	0.008	UPSTREAM nonC DOWNSTREAM Atx-1 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens mE1_TFBS_Ubx
X	9241783	X_9241783_SNP [dm3] X_9347750_SNP [dm6]	G	C	2.082e^-6	0.008	INTRON CG34449
3R	5319141	3R_5319141_SNP [dm3] 3R_9493419_SNP [dm6]	G	A	2.099e^-6	0.008	UTR_5_PRIME CG16779	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sbb mE1_TFBS_Trl
X	19882870	X_19882870_SNP [dm3] X_19988837_SNP [dm6]	C	A	2.119e^-6	0.008	INTERGENIC
2R	19221582	2R_19221582_SNP [dm3] 2R_23334059_SNP [dm6]	G	A	2.121e^-6	0.008	INTERGENIC
3L	7874584	3L_7874584_SNP [dm3] 3L_7881484_SNP [dm6]	G	A	2.121e^-6	0.008	INTRON CG32365
3R	3030335	3R_3030335_SNP [dm3] 3R_7204613_SNP [dm6]	T	G	2.121e^-6	0.008	INTERGENIC
3R	6525267	3R_6525267_SNP [dm3] 3R_10699545_SNP [dm6]	C	T	2.132e^-6	0.008	UPSTREAM pug DOWNSTREAM CG14683 INTRON pug	TF binding site BDTNP1_TFBS_da mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Trl
3R	5855553	3R_5855553_SNP [dm3] 3R_10029831_SNP [dm6]	T	C	2.138e^-6	0.008	INTRON Mical
3L	10722278	3L_10722278_SNP [dm3] 3L_10729178_SNP [dm6]	C	A	2.145e^-6	0.008	INTERGENIC
3L	16234998	3L_16234998_SNP [dm3] 3L_16241898_SNP [dm6]	G	T	2.195e^-6	0.008	INTERGENIC
3R	25502314	3R_25502314_SNP [dm3] 3R_29676592_SNP [dm6]	C	T	2.213e^-6	0.008	SYNONYMOUS_CODING Cap-D2	TF binding site mE1_TFBS_sens
2L	7659973	2L_7659973_SNP [dm3] 2L_7659973_SNP [dm6]	C	T	2.218e^-6	0.008	UPSTREAM Slob INTRON Slob	TF binding site BDTNP1_TFBS_dl
2L	922186	2L_922186_SNP [dm3] 2L_922186_SNP [dm6]	A	T	2.240e^-6	0.008	UPSTREAM CG4341 INTERGENIC
X	21871882	X_21871882_SNP [dm3] X_22470046_SNP [dm6]	G	A	2.245e^-6	0.008	UTR_3_PRIME CG14619 & 1 other DOWNSTREAM CG14613
3L	5699409	3L_5699409_SNP [dm3] 3L_5706309_SNP [dm6]	A	G	2.280e^-6	0.008	INTRON sif	TF binding site mE1_TFBS_cad
2L	2471536	2L_2471536_DEL [dm3] 2L_2471536_DEL [dm6]	AG	A	2.288e^-6	0.008	DOWNSTREAM CR45286 INTERGENIC	enhancer FlyBase
3R	24469051	3R_24469051_DEL [dm3] 3R_28643329_DEL [dm6]	TATTATCGTTGTTTGTTCCA...	CT	2.315e^-6	0.008	UPSTREAM CG14062 INTERGENIC
2L	20508010	2L_20508010_SNP [dm3] 2L_20508010_SNP [dm6]	A	T	2.324e^-6	0.008	INTERGENIC
2R	904073	2R_904073_SNP [dm3] 2R_5016568_SNP [dm6]	C	G	2.332e^-6	0.008	INTRON Ir41a
2R	20001149	2R_20001149_SNP [dm3] 2R_24113626_SNP [dm6]	A	C	2.334e^-6	0.008	UPSTREAM CG3253 INTRON CG4049	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
X	5570172	X_5570172_DEL [dm3] X_5676139_DEL [dm6]	GCACGCCATTTG...	G	2.387e^-6	0.008	INTRON Tre1	regulatory region REDfly_CRMs
2R	11472294	2R_11472294_SNP [dm3] 2R_15584789_SNP [dm6]	A	C	2.387e^-6	0.008	INTERGENIC
3L	15608034	3L_15608034_SNP [dm3] 3L_15614934_SNP [dm6]	T	C	2.399e^-6	0.008	INTRON comm3
2R	6018553	2R_6018553_DEL [dm3] 2R_10131048_DEL [dm6]	ACA	T	2.403e^-6	0.008	INTRON gem	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
2R	12483928	2R_12483928_SNP [dm3] 2R_16596423_SNP [dm6]	A	T	2.417e^-6	0.008	INTRON CG8303
3L	16205255	3L_16205255_SNP [dm3] 3L_16212155_SNP [dm6]	A	C	2.418e^-6	0.008	DOWNSTREAM CG13073 INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	6716371	X_6716371_SNP [dm3] X_6822338_SNP [dm6]	A	G	2.418e^-6	0.008	UPSTREAM Atx-1 INTRON CG4542	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	7201109	2R_7201109_SNP [dm3] 2R_11313604_SNP [dm6]	C	A	2.425e^-6	0.008	NON_SYNONYMOUS_CODING nompA	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	10218490	2L_10218490_SNP [dm3] 2L_10218490_SNP [dm6]	A	T	2.463e^-6	0.008	INTRON Npc1a	TF binding site mE1_TFBS_HSA
2L	10218493	2L_10218493_SNP [dm3] 2L_10218493_SNP [dm6]	T	C	2.463e^-6	0.008	INTRON Npc1a	TF binding site mE1_TFBS_HSA
2L	56682	2L_56682_SNP [dm3] 2L_56682_SNP [dm6]	A	G	2.463e^-6	0.008	INTRON Cda5
2L	5857690	2L_5857690_SNP [dm3] 2L_5857690_SNP [dm6]	G	T	2.463e^-6	0.008	DOWNSTREAM TrissinR INTERGENIC
2L	61157	2L_61157_SNP [dm3] 2L_61157_SNP [dm6]	T	A	2.463e^-6	0.008	INTRON Cda5
2L	7944054	2L_7944054_DEL [dm3] 2L_7944054_DEL [dm6]	ATATTAG	A	2.463e^-6	0.008	INTRON Snoo
2L	7944098	2L_7944098_SNP [dm3] 2L_7944098_SNP [dm6]	C	T	2.463e^-6	0.008	INTRON Snoo
2R	19221577	2R_19221577_SNP [dm3] 2R_23334054_SNP [dm6]	A	G	2.463e^-6	0.008	INTERGENIC
2R	19221741	2R_19221741_SNP [dm3] 2R_23334218_SNP [dm6]	T	C	2.463e^-6	0.008	INTERGENIC
2R	6490043	2R_6490043_SNP [dm3] 2R_10602538_SNP [dm6]	T	C	2.463e^-6	0.008	INTRON psq	TF binding site BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
3L	10722000	3L_10722000_SNP [dm3] 3L_10728900_SNP [dm6]	C	G	2.463e^-6	0.008	INTERGENIC
3L	13290580	3L_13290580_SNP [dm3] 3L_13297480_SNP [dm6]	A	G	2.463e^-6	0.008	UPSTREAM Sfp70A4 & 1 other DOWNSTREAM CR45255 EXON CR45253
3L	13290598	3L_13290598_SNP [dm3] 3L_13297498_SNP [dm6]	T	G	2.463e^-6	0.008	UPSTREAM Sfp70A4 & 1 other DOWNSTREAM CR45255 EXON CR45253
3L	683870	3L_683870_SNP [dm3] 3L_683870_SNP [dm6]	T	C	2.463e^-6	0.008	SYNONYMOUS_CODING ebd1	TF binding site BDTNP1_TFBS_dl mE1_TFBS_chinmo mE1_TFBS_sens
2L	14587776	2L_14587776_SNP [dm3] 2L_14587776_SNP [dm6]	T	A	2.476e^-6	0.008	DOWNSTREAM CG42680 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv mE1_TFBS_Kr
3L	4509165	3L_4509165_SNP [dm3] 3L_4509165_SNP [dm6]	C	A	2.478e^-6	0.008	UPSTREAM NT1 INTERGENIC
3L	4509609	3L_4509609_SNP [dm3] 3L_4509609_SNP [dm6]	T	G	2.478e^-6	0.008	INTERGENIC
2R	11353954	2R_11353954_SNP [dm3] 2R_15466449_SNP [dm6]	A	T	2.481e^-6	0.008	INTRON CG43729
3L	16205329	3L_16205329_SNP [dm3] 3L_16212229_SNP [dm6]	C	A	2.481e^-6	0.008	DOWNSTREAM CG13073 INTERGENIC	TF binding site BDTNP1_TFBS_dl
2L	905192	2L_905192_DEL [dm3] 2L_905192_DEL [dm6]	CTCCCTTC	C	2.491e^-6	0.008	DOWNSTREAM CR45261 INTERGENIC
2R	19219193	2R_19219193_SNP [dm3] 2R_23331670_SNP [dm6]	A	G	2.491e^-6	0.008	INTERGENIC
2R	21120804	2R_21120804_SNP [dm3] 2R_25233281_SNP [dm6]	C	T	2.491e^-6	0.008	INTRON CG9380	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3L	12976159	3L_12976159_SNP [dm3] 3L_12983059_SNP [dm6]	G	A	2.491e^-6	0.008	INTERGENIC
3L	18064885	3L_18064885_SNP [dm3] 3L_18071785_SNP [dm6]	C	T	2.491e^-6	0.008	SYNONYMOUS_CODING CG44005 DOWNSTREAM CG44004
3L	18171438	3L_18171438_DEL [dm3] 3L_18178338_DEL [dm6]	TTCTTAGC	T	2.491e^-6	0.008	INTRON W
3L	18171447	3L_18171447_SNP [dm3] 3L_18178347_SNP [dm6]	T	A	2.491e^-6	0.008	INTRON W
3L	18602322	3L_18602322_SNP [dm3] 3L_18609222_SNP [dm6]	G	C	2.491e^-6	0.008	NON_SYNONYMOUS_CODING CG18231 UPSTREAM CG32201 INTRON CG4174 & 1 other
3L	5032005	3L_5032005_SNP [dm3] 3L_5032005_SNP [dm6]	G	C	2.491e^-6	0.008	INTRON Con
3R	12704672	3R_12704672_SNP [dm3] 3R_16878950_SNP [dm6]	G	T	2.491e^-6	0.008	INTRON iab-8	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_hb BDTNP1_TFBS_kni BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr
X	5517017	X_5517017_SNP [dm3] X_5622984_SNP [dm6]	A	G	2.491e^-6	0.008	SYNONYMOUS_CODING l_1_G0045 UPSTREAM mir-3645 & 1 other	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Mad BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	6717898	X_6717898_SNP [dm3] X_6823865_SNP [dm6]	T	C	2.491e^-6	0.008	SYNONYMOUS_CODING Atx-1 UPSTREAM nonC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_shn BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	5143035	2R_5143035_SNP [dm3] 2R_9255530_SNP [dm6]	C	T	2.492e^-6	0.008	SYNONYMOUS_CODING Pkn
2R	14430442	2R_14430442_SNP [dm3] 2R_18542937_SNP [dm6]	G	T	2.502e^-6	0.008	INTRON Rgk2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	16353277	2L_16353277_SNP [dm3] 2L_16353277_SNP [dm6]	G	A	2.502e^-6	0.008	SYNONYMOUS_CODING CG4455 UPSTREAM chif & 1 other	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	2738046	2L_2738046_SNP [dm3] 2L_2738046_SNP [dm6]	A	T	2.502e^-6	0.008	DOWNSTREAM mir-4914 INTRON CG31689
3R	10525041	3R_10525041_SNP [dm3] 3R_14699319_SNP [dm6]	C	T	2.502e^-6	0.008	SYNONYMOUS_CODING kibra	TF binding site mE1_TFBS_cad
X	22227003	X_22227003_SNP [dm3] X_22825167_SNP [dm6]	A	T	2.502e^-6	0.008	UTR_3_PRIME fog DOWNSTREAM fog	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1
2L	18886479	2L_18886479_SNP [dm3] 2L_18886479_SNP [dm6]	T	C	2.506e^-6	0.008	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
2L	20857121	2L_20857121_SNP [dm3] 2L_20857121_SNP [dm6]	G	A	2.506e^-6	0.008	UTR_3_PRIME CG14400 DOWNSTREAM twit	TF binding site mE1_TFBS_HSA
2L	20857230	2L_20857230_SNP [dm3] 2L_20857230_SNP [dm6]	T	A	2.506e^-6	0.008	NON_SYNONYMOUS_CODING CG14400 DOWNSTREAM twit	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	13189003	2R_13189003_SNP [dm3] 2R_17301498_SNP [dm6]	C	G	2.512e^-6	0.008	INTRON mbl
2R	17056903	2R_17056903_SNP [dm3] 2R_21169398_SNP [dm6]	T	G	2.512e^-6	0.008	NON_SYNONYMOUS_CODING hng1 UPSTREAM CG4266 DOWNSTREAM LSm1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2R	3817055	2R_3817055_SNP [dm3] 2R_7929550_SNP [dm6]	C	T	2.512e^-6	0.008	SYNONYMOUS_CODING CG8791 DOWNSTREAM CG30381	TF binding site mE1_TFBS_cad
2R	3820599	2R_3820599_SNP [dm3] 2R_7933094_SNP [dm6]	C	T	2.512e^-6	0.008	SYNONYMOUS_CODING drosha UPSTREAM rnh1	TF binding site mE1_TFBS_sens
2R	5633365	2R_5633365_SNP [dm3] 2R_9745860_SNP [dm6]	C	T	2.512e^-6	0.008	UTR_5_PRIME sqa UPSTREAM sqa
2R	5633403	2R_5633403_SNP [dm3] 2R_9745898_SNP [dm6]	G	T	2.512e^-6	0.008	UTR_5_PRIME sqa UPSTREAM sqa
X	9375476	X_9375476_SNP [dm3] X_9481443_SNP [dm6]	G	C	2.512e^-6	0.008	INTRON mgl
2R	16249393	2R_16249393_SNP [dm3] 2R_20361888_SNP [dm6]	G	T	2.540e^-6	0.008	INTERGENIC
3L	4097981	3L_4097981_SNP [dm3] 3L_4097981_SNP [dm6]	T	C	2.563e^-6	0.008	INTRON CG14995	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA
X	901651	X_901651_INS [dm3] X_1007618_INS [dm6]	C	CCCACTC	2.569e^-6	0.008	INTERGENIC
2R	14309409	2R_14309409_SNP [dm3] 2R_18421904_SNP [dm6]	A	T	2.572e^-6	0.008	DOWNSTREAM Dp1 INTRON CG5174
2R	14741314	2R_14741314_SNP [dm3] 2R_18853809_SNP [dm6]	A	C	2.572e^-6	0.008	SYNONYMOUS_CODING Jheh1 UPSTREAM CG18190	TF binding site mE1_TFBS_cad
2R	17646191	2R_17646191_SNP [dm3] 2R_21758686_SNP [dm6]	T	A	2.572e^-6	0.008	DOWNSTREAM Grx-1 INTERGENIC
2R	6018562	2R_6018562_SNP [dm3] 2R_10131057_SNP [dm6]	G	A	2.572e^-6	0.008	INTRON gem	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3L	22752907	3L_22752907_SNP [dm3] 3L_22759807_SNP [dm6]	C	T	2.572e^-6	0.008	UPSTREAM SPoCk INTRON SPoCk
3R	22423299	3R_22423299_SNP [dm3] 3R_26597577_SNP [dm6]	C	T	2.572e^-6	0.008	INTRON scrib
X	5600699	X_5600699_SNP [dm3] X_5706666_SNP [dm6]	T	A	2.572e^-6	0.008	INTRON CG4096	TF binding site mE1_TFBS_chinmo
X	7903752	X_7903752_SNP [dm3] X_8009719_SNP [dm6]	C	T	2.572e^-6	0.008	INTRON Tbh
X	8113447	X_8113447_SNP [dm3] X_8219414_SNP [dm6]	C	A	2.572e^-6	0.008	INTRON sdt	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna BDTNP1_TFBS_twi
2L	12776121	2L_12776121_SNP [dm3] 2L_12776121_SNP [dm6]	A	G	2.583e^-6	0.008	INTERGENIC
3L	12607549	3L_12607549_SNP [dm3] 3L_12614449_SNP [dm6]	T	A	2.655e^-6	0.008	INTRON caup	TF binding site mE1_TFBS_Stat92E
2L	2737994	2L_2737994_SNP [dm3] 2L_2737994_SNP [dm6]	T	G	2.703e^-6	0.008	DOWNSTREAM mir-4914 INTRON CG31689
3L	19366004	3L_19366004_SNP [dm3] 3L_19372904_SNP [dm6]	T	C	2.721e^-6	0.008	INTRON CG32206	TF binding site BDTNP1_TFBS_Med
3L	9380951	3L_9380951_SNP [dm3] 3L_9387851_SNP [dm6]	G	T	2.723e^-6	0.008	SYNONYMOUS_CODING CG4080	TF binding site mE1_TFBS_cad
X	13207005	X_13207005_SNP [dm3] X_13312972_SNP [dm6]	G	T	2.731e^-6	0.008	INTRON IP3K2
2R	16914649	2R_16914649_SNP [dm3] 2R_21027144_SNP [dm6]	T	C	2.748e^-6	0.008	INTERGENIC
3R	25500821	3R_25500821_SNP [dm3] 3R_29675099_SNP [dm6]	T	A	2.777e^-6	0.008	UPSTREAM Cap-D2 DOWNSTREAM ppk19 INTRON Bub3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA mE1_TFBS_sens
3R	25500902	3R_25500902_SNP [dm3] 3R_29675180_SNP [dm6]	C	T	2.777e^-6	0.008	SYNONYMOUS_CODING Bub3 UPSTREAM Cap-D2 DOWNSTREAM ppk19	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_sens
3R	25502086	3R_25502086_SNP [dm3] 3R_29676364_SNP [dm6]	G	A	2.777e^-6	0.008	SYNONYMOUS_CODING Cap-D2 UPSTREAM Bub3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_sens
2R	14620418	2R_14620418_INS [dm3] 2R_18732913_INS [dm6]	T	TT	2.785e^-6	0.008	INTRON Hs3st-A
2R	11353991	2R_11353991_SNP [dm3] 2R_15466486_SNP [dm6]	A	G	2.802e^-6	0.009	INTRON CG43729
2R	2699974	2R_2699974_SNP [dm3] 2R_6812469_SNP [dm6]	A	G	2.809e^-6	0.009	UPSTREAM koi INTRON koi	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_sens
2R	15207144	2R_15207144_SNP [dm3] 2R_19319639_SNP [dm6]	A	G	2.813e^-6	0.009	SYNONYMOUS_CODING Rgk1
X	8809576	X_8809576_INS [dm3] X_8915543_INS [dm6]	A	AA	2.874e^-6	0.009	INTRON rdgA
3L	14479229	3L_14479229_SNP [dm3] 3L_14486129_SNP [dm6]	A	C	2.890e^-6	0.009	INTRON bbg
3L	14479231	3L_14479231_SNP [dm3] 3L_14486131_SNP [dm6]	T	C	2.890e^-6	0.009	INTRON bbg
3L	14479233	3L_14479233_SNP [dm3] 3L_14486133_SNP [dm6]	T	A	2.890e^-6	0.009	INTRON bbg
3R	25501294	3R_25501294_SNP [dm3] 3R_29675572_SNP [dm6]	C	G	2.902e^-6	0.009	UPSTREAM Cap-D2 & 1 other INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_disco mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_jumu
2L	7946284	2L_7946284_SNP [dm3] 2L_7946284_SNP [dm6]	C	G	2.903e^-6	0.009	INTRON Snoo
2R	6877805	2R_6877805_SNP [dm3] 2R_10990300_SNP [dm6]	G	T	2.917e^-6	0.009	SYNONYMOUS_CODING luna	TF binding site BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	15637464	2L_15637464_SNP [dm3] 2L_15637464_SNP [dm6]	A	G	2.948e^-6	0.009	INTERGENIC
2R	19221810	2R_19221810_DEL [dm3] 2R_23334287_DEL [dm6]	AA	A	2.948e^-6	0.009	INTERGENIC
2L	4840357	2L_4840357_SNP [dm3] 2L_4840357_SNP [dm6]	G	A	2.950e^-6	0.009	NON_SYNONYMOUS_CODING CG12194	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
2L	10387580	2L_10387580_SNP [dm3] 2L_10387580_SNP [dm6]	A	G	2.962e^-6	0.009	UTR_3_PRIME mRpS7 UPSTREAM da DOWNSTREAM mRpS7	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med
2R	16449701	2R_16449701_SNP [dm3] 2R_20562196_SNP [dm6]	A	G	2.970e^-6	0.009	UTR_5_PRIME Mgat1 UPSTREAM CR44653 DOWNSTREAM CG43308 & 1 other	TF binding site BDTNP1_TFBS_dl
2R	8473775	2R_8473775_SNP [dm3] 2R_12586270_SNP [dm6]	A	G	2.971e^-6	0.009	INTRON Sin3A	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_Trl mE1_TFBS_zfh1
3L	670867	3L_670867_DEL [dm3] 3L_670867_DEL [dm6]	TAAAT	T	2.973e^-6	0.009	INTERGENIC
X	19908565	X_19908565_SNP [dm3] X_20014532_SNP [dm6]	A	T	2.980e^-6	0.009	UPSTREAM Dop2R INTRON Dop2R
2R	14430193	2R_14430193_SNP [dm3] 2R_18542688_SNP [dm6]	G	T	2.981e^-6	0.009	INTRON Rgk2	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	20919593	2R_20919593_SNP [dm3] 2R_25032070_SNP [dm6]	T	C	2.981e^-6	0.009	UPSTREAM Nplp1 DOWNSTREAM uzip INTERGENIC
3L	16479105	3L_16479105_SNP [dm3] 3L_16486005_SNP [dm6]	C	A	2.981e^-6	0.009	INTRON CG33158	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA
X	5554283	X_5554283_SNP [dm3] X_5660250_SNP [dm6]	T	C	2.981e^-6	0.009	SYNONYMOUS_CODING CG42265	TF binding site BDTNP1_TFBS_sna mE1_TFBS_chinmo
2L	12272964	2L_12272964_INS [dm3] 2L_12272964_INS [dm6]	G	GATAACACGGCTACTGCG...	2.982e^-6	0.009	INTRON aret
3R	2499802	3R_2499802_SNP [dm3] 3R_6674080_SNP [dm6]	T	A	2.988e^-6	0.009	INTRON lab	regulatory region FlyBase REDfly_CRMs
3L	17560865	3L_17560865_SNP [dm3] 3L_17567765_SNP [dm6]	T	G	2.994e^-6	0.009	INTRON Eip74EF
3L	17561048	3L_17561048_SNP [dm3] 3L_17567948_SNP [dm6]	A	G	2.994e^-6	0.009	INTRON Eip74EF
3R	5805829	3R_5805829_SNP [dm3] 3R_9980107_SNP [dm6]	C	T	2.999e^-6	0.009	INTRON Glut4EF	TF binding site mE1_TFBS_Trl
3R	12648574	3R_12648574_SNP [dm3] 3R_16822852_SNP [dm6]	G	A	3.004e^-6	0.009	INTRON abd-A	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad
2L	15439059	2L_15439059_SNP [dm3] 2L_15439059_SNP [dm6]	G	C	3.008e^-6	0.009	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	13990836	3R_13990836_SNP [dm3] 3R_18165114_SNP [dm6]	T	C	3.011e^-6	0.009	UPSTREAM CG7218 DOWNSTREAM CG7215 & 1 other INTRON Cbp20	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2L	17942960	2L_17942960_SNP [dm3] 2L_17942960_SNP [dm6]	G	C	3.012e^-6	0.009	INTERGENIC
2L	4786885	2L_4786885_SNP [dm3] 2L_4786885_SNP [dm6]	A	G	3.019e^-6	0.009	INTRON CG15630
3L	4509013	3L_4509013_SNP [dm3] 3L_4509013_SNP [dm6]	C	T	3.031e^-6	0.009	UPSTREAM NT1 INTERGENIC
3L	15745606	3L_15745606_SNP [dm3] 3L_15752506_SNP [dm6]	A	G	3.040e^-6	0.009	INTERGENIC	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3L	2791908	3L_2791908_SNP [dm3] 3L_2791908_SNP [dm6]	G	A	3.052e^-6	0.009	SYNONYMOUS_CODING CG43444	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	248511	3L_248511_SNP [dm3] 3L_248511_SNP [dm6]	G	A	3.065e^-6	0.009	SYNONYMOUS_CODING mthl14	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2L	18873450	2L_18873450_SNP [dm3] 2L_18873450_SNP [dm6]	A	C	3.066e^-6	0.009	INTRON tup	TF binding site BDTNP1_TFBS_dl
3L	4613491	3L_4613491_SNP [dm3] 3L_4613491_SNP [dm6]	T	A	3.077e^-6	0.009	UPSTREAM Src64B INTRON Src64B	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi
2R	14491556	2R_14491556_INS [dm3] 2R_18604051_INS [dm6]	A	ACA	3.079e^-6	0.009	INTRON GEFmeso	TF binding site mE1_TFBS_inv
3R	26738087	3R_26738087_SNP [dm3] 3R_30912365_SNP [dm6]	C	G	3.079e^-6	0.009	UPSTREAM Ptx1 INTERGENIC	silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	3261064	3R_3261064_SNP [dm3] 3R_7435342_SNP [dm6]	T	C	3.079e^-6	0.009	INTERGENIC
3L	14575781	3L_14575781_SNP [dm3] 3L_14582681_SNP [dm6]	C	T	3.087e^-6	0.009	DOWNSTREAM HGTX INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_hb BDTNP1_TFBS_tll mE1_TFBS_HSA
3R	15825746	3R_15825746_SNP [dm3] 3R_20000024_SNP [dm6]	G	A	3.092e^-6	0.009	INTRON Hs6st
2R	11638360	2R_11638360_SNP [dm3] 2R_15750855_SNP [dm6]	T	A	3.094e^-6	0.009	INTRON CG30089	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_Trl
2R	11641149	2R_11641149_SNP [dm3] 2R_15753644_SNP [dm6]	G	A	3.094e^-6	0.009	INTRON CG30089
3R	10415986	3R_10415986_SNP [dm3] 3R_14590264_SNP [dm6]	A	G	3.094e^-6	0.009	INTRON stumps	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10416032	3R_10416032_SNP [dm3] 3R_14590310_SNP [dm6]	T	G	3.094e^-6	0.009	INTRON stumps	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	9807706	3R_9807706_SNP [dm3] 3R_13981984_SNP [dm6]	C	G	3.095e^-6	0.009	SYNONYMOUS_CODING rdx INTRON rdx	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	8971707	X_8971707_SNP [dm3] X_9077674_SNP [dm6]	A	C	3.098e^-6	0.009	INTRON CG44325
3R	2446333	3R_2446333_SNP [dm3] 3R_6620611_SNP [dm6]	A	T	3.100e^-6	0.009	INTERGENIC
2R	3819525	2R_3819525_SNP [dm3] 2R_7932020_SNP [dm6]	G	A	3.103e^-6	0.009	SYNONYMOUS_CODING rnh1 UPSTREAM drosha	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_ttk mE1_TFBS_Ubx
3R	21861178	3R_21861178_SNP [dm3] 3R_26035456_SNP [dm6]	G	A	3.108e^-6	0.009	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3R	21861404	3R_21861404_SNP [dm3] 3R_26035682_SNP [dm6]	T	A	3.108e^-6	0.009	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl
3L	16854728	3L_16854728_SNP [dm3] 3L_16861628_SNP [dm6]	C	T	3.129e^-6	0.009	SYNONYMOUS_CODING CG13029 INTRON Rh4	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_zfh1
3L	307221	3L_307221_SNP [dm3] 3L_307221_SNP [dm6]	A	G	3.129e^-6	0.009	SYNONYMOUS_CODING fwd
3L	307273	3L_307273_SNP [dm3] 3L_307273_SNP [dm6]	G	A	3.129e^-6	0.009	INTRON fwd
3L	307334	3L_307334_SNP [dm3] 3L_307334_SNP [dm6]	A	T	3.129e^-6	0.009	SYNONYMOUS_CODING fwd
X	9153177	X_9153177_SNP [dm3] X_9259144_SNP [dm6]	T	G	3.129e^-6	0.009	UTR_3_PRIME ric8a DOWNSTREAM CR17438 & 1 other
X	20802525	X_20802525_SNP [dm3] X_20931498_SNP [dm6]	G	A	3.160e^-6	0.009	SYNONYMOUS_CODING CG11227 UTR_3_PRIME CG11227
X	20802531	X_20802531_SNP [dm3] X_20931504_SNP [dm6]	G	A	3.160e^-6	0.009	SYNONYMOUS_CODING CG11227 UTR_3_PRIME CG11227
2R	9157285	2R_9157285_SNP [dm3] 2R_13269780_SNP [dm6]	T	A	3.171e^-6	0.009	INTRON Dh31-R
2R	14313839	2R_14313839_SNP [dm3] 2R_18426334_SNP [dm6]	G	A	3.181e^-6	0.009	UPSTREAM CG12263 DOWNSTREAM CG5174 INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_HSA mE1_TFBS_Ubx
X	10860643	X_10860643_DEL [dm3] X_10966610_DEL [dm6]	TAATATTA	T	3.199e^-6	0.009	INTRON C901
X	10860652	X_10860652_SNP [dm3] X_10966619_SNP [dm6]	T	G	3.199e^-6	0.009	INTRON C901
X	10860658	X_10860658_SNP [dm3] X_10966625_SNP [dm6]	T	G	3.199e^-6	0.009	INTRON C901
X	10860660	X_10860660_SNP [dm3] X_10966627_SNP [dm6]	T	A	3.199e^-6	0.009	INTRON C901
X	10860661	X_10860661_DEL [dm3] X_10966628_DEL [dm6]	ACGTTTGACTACTCCGT...	A	3.199e^-6	0.009	INTRON C901
3L	15636878	3L_15636878_SNP [dm3] 3L_15643778_SNP [dm6]	G	A	3.214e^-6	0.009	INTRON comm3
3R	5772099	3R_5772099_SNP [dm3] 3R_9946377_SNP [dm6]	A	G	3.215e^-6	0.009	INTRON Glut4EF	TF binding site mE1_TFBS_cad
2L	12776115	2L_12776115_SNP [dm3] 2L_12776115_SNP [dm6]	T	G	3.216e^-6	0.009	INTERGENIC
X	20466250	X_20466250_SNP [dm3] X_20595223_SNP [dm6]	C	G	3.216e^-6	0.009	INTRON RunxA
2R	5596618	2R_5596618_SNP [dm3] 2R_9709113_SNP [dm6]	A	T	3.332e^-6	0.009	DOWNSTREAM CG10459 EXON CR44292	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	14697330	2L_14697330_SNP [dm3] 2L_14697330_SNP [dm6]	T	C	3.413e^-6	0.009	INTERGENIC
3L	24227373	3L_24227373_SNP [dm3] 3L_24234273_SNP [dm6]	C	A	3.443e^-6	0.009	INTRON Snap25
2R	14620406	2R_14620406_SNP [dm3] 2R_18732901_SNP [dm6]	C	G	3.451e^-6	0.009	INTRON Hs3st-A
2R	2704966	2R_2704966_SNP [dm3] 2R_6817461_SNP [dm6]	T	A	3.471e^-6	0.009	UTR_3_PRIME koi
2L	3975374	2L_3975374_SNP [dm3] 2L_3975374_SNP [dm6]	G	A	3.481e^-6	0.009	INTRON fred
2L	6812044	2L_6812044_SNP [dm3] 2L_6812044_SNP [dm6]	G	A	3.481e^-6	0.009	UPSTREAM CR44081 INTERGENIC
2L	16090471	2L_16090471_SNP [dm3] 2L_16090471_SNP [dm6]	C	G	3.514e^-6	0.009	INTERGENIC
3L	12828705	3L_12828705_SNP [dm3] 3L_12835605_SNP [dm6]	A	T	3.514e^-6	0.009	INTRON CG10960	TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
3L	12031304	3L_12031304_SNP [dm3] 3L_12038204_SNP [dm6]	T	C	3.543e^-6	0.01	INTRON rols
2L	1635691	2L_1635691_SNP [dm3] 2L_1635691_SNP [dm6]	A	T	3.549e^-6	0.01	INTERGENIC
2L	12181138	2L_12181138_SNP [dm3] 2L_12181138_SNP [dm6]	G	T	3.560e^-6	0.01	INTRON aret
2R	15208978	2R_15208978_SNP [dm3] 2R_19321473_SNP [dm6]	C	A	3.566e^-6	0.01	INTRON Rgk1	TF binding site mE1_TFBS_inv
2L	9043147	2L_9043147_SNP [dm3] 2L_9043147_SNP [dm6]	C	A	3.574e^-6	0.01	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	15888267	3L_15888267_SNP [dm3] 3L_15895167_SNP [dm6]	C	A	3.578e^-6	0.01	INTRON pHCl
3R	11470927	3R_11470927_SNP [dm3] 3R_15645205_SNP [dm6]	C	A	3.591e^-6	0.01	INTERGENIC	TF binding site BDTNP1_TFBS_da
2R	4291040	2R_4291040_SNP [dm3] 2R_8403535_SNP [dm6]	T	A	3.603e^-6	0.01	INTRON CG2121
3R	13990841	3R_13990841_INS [dm3] 3R_18165119_INS [dm6]	T	TCCTTGTCGGTTAAAGGGAT...	3.605e^-6	0.01	UPSTREAM CG7218 DOWNSTREAM CG7215 & 1 other INTRON Cbp20	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
X	11656119	X_11656119_SNP [dm3] X_11762086_SNP [dm6]	A	G	3.627e^-6	0.01	INTRON m
2R	15204367	2R_15204367_SNP [dm3] 2R_19316862_SNP [dm6]	T	C	3.631e^-6	0.01	INTRON Rgk1
3L	11957706	3L_11957706_DEL [dm3] 3L_11964606_DEL [dm6]	CTAATG	C	3.647e^-6	0.01	INTRON prc	TF binding site mE1_TFBS_chinmo
3R	8597694	3R_8597694_DEL [dm3] 3R_12771972_DEL [dm6]	CT	C	3.656e^-6	0.01	INTRON beat-Vc
3R	22253655	3R_22253655_SNP [dm3] 3R_26427933_SNP [dm6]	T	A	3.663e^-6	0.01	UPSTREAM CR43434 INTRON CR31084
3L	16748564	3L_16748564_SNP [dm3] 3L_16755464_SNP [dm6]	T	C	3.671e^-6	0.01	UPSTREAM CG42852 INTERGENIC
3L	2554680	3L_2554680_SNP [dm3] 3L_2554680_SNP [dm6]	G	A	3.682e^-6	0.01	UPSTREAM Spn DOWNSTREAM msn INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_bab1 mE1_TFBS_HSA
3R	9960089	3R_9960089_SNP [dm3] 3R_14134367_SNP [dm6]	A	T	3.684e^-6	0.01	INTERGENIC
2R	8939920	2R_8939920_SNP [dm3] 2R_13052415_SNP [dm6]	C	T	3.695e^-6	0.01	INTERGENIC
3L	11504590	3L_11504590_SNP [dm3] 3L_11511490_SNP [dm6]	G	A	3.695e^-6	0.01	UPSTREAM CG33272 & 1 other INTERGENIC	regulatory region REDfly_CRMs TF binding site mE1_TFBS_bab1 mE1_TFBS_HSA
X	10860319	X_10860319_SNP [dm3] X_10966286_SNP [dm6]	G	A	3.695e^-6	0.01	SYNONYMOUS_CODING C901
3L	14479228	3L_14479228_SNP [dm3] 3L_14486128_SNP [dm6]	A	G	3.700e^-6	0.01	INTRON bbg
2R	2660756	2R_2660756_SNP [dm3] 2R_6773251_SNP [dm6]	A	G	3.748e^-6	0.01	INTRON Epac
3R	9886754	3R_9886754_SNP [dm3] 3R_14061032_SNP [dm6]	A	G	3.778e^-6	0.01	INTRON foxo	TF binding site BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_cnc mE1_TFBS_HSA
X	7997451	X_7997451_SNP [dm3] X_8103418_SNP [dm6]	T	A	3.807e^-6	0.01	UTR_3_PRIME Gclc
2L	12453448	2L_12453448_SNP [dm3] 2L_12453448_SNP [dm6]	C	A	3.809e^-6	0.01	UPSTREAM CR17024 & 1 other INTERGENIC
3L	1915124	3L_1915124_INS [dm3] 3L_1915124_INS [dm6]	A	AAA	3.809e^-6	0.01	INTERGENIC
2L	1379193	2L_1379193_SNP [dm3] 2L_1379193_SNP [dm6]	G	A	3.817e^-6	0.01	DOWNSTREAM CR44898 & 1 other INTERGENIC
3L	312177	3L_312177_SNP [dm3] 3L_312177_SNP [dm6]	T	A	3.873e^-6	0.01	UPSTREAM fwd INTRON fwd	TF binding site BDTNP1_TFBS_z mE1_TFBS_HSA
2L	8284419	2L_8284419_DEL [dm3] 2L_8284419_DEL [dm6]	AATTAACTTTAATTACTTCC...	A	3.885e^-6	0.01	INTRON Btk29A	TF binding site mE1_TFBS_inv
2R	7537932	2R_7537932_SNP [dm3] 2R_11650427_SNP [dm6]	T	C	3.931e^-6	0.01	INTRON CG9003	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad
3L	15944639	3L_15944639_SNP [dm3] 3L_15951539_SNP [dm6]	T	C	3.949e^-6	0.01	INTRON Pka-C3
2L	9431672	2L_9431672_SNP [dm3] 2L_9431672_SNP [dm6]	G	A	3.949e^-6	0.01	UTR_5_PRIME scat UPSTREAM FucTB	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	16116625	3R_16116625_SNP [dm3] 3R_20290903_SNP [dm6]	C	A	3.981e^-6	0.01	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
3R	16116627	3R_16116627_SNP [dm3] 3R_20290905_SNP [dm6]	C	T	3.981e^-6	0.01	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
2R	12481883	2R_12481883_SNP [dm3] 2R_16594378_SNP [dm6]	G	A	4.007e^-6	0.01	UTR_5_PRIME CG8306 DOWNSTREAM CG8303	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Trl mE1_TFBS_zfh1
3L	12978497	3L_12978497_SNP [dm3] 3L_12985397_SNP [dm6]	G	C	4.028e^-6	0.01	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1
2L	10382946	2L_10382946_SNP [dm3] 2L_10382946_SNP [dm6]	C	A	4.059e^-6	0.01	DOWNSTREAM gny INTRON CG5096
X	12405544	X_12405544_SNP [dm3] X_12511511_SNP [dm6]	C	T	4.075e^-6	0.01	INTRON CG2556
2R	2704880	2R_2704880_SNP [dm3] 2R_6817375_SNP [dm6]	A	C	4.089e^-6	0.01	UTR_3_PRIME koi
2R	5596674	2R_5596674_SNP [dm3] 2R_9709169_SNP [dm6]	T	A	4.118e^-6	0.01	DOWNSTREAM CG10459 EXON CR44292	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_slp1 mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	14697331	2L_14697331_SNP [dm3] 2L_14697331_SNP [dm6]	G	T	4.127e^-6	0.01	INTERGENIC
2L	15437693	2L_15437693_DEL [dm3] 2L_15437693_DEL [dm6]	TGAA	T	4.133e^-6	0.01	INTERGENIC
X	5795147	X_5795147_DEL [dm3] X_5901114_DEL [dm6]	TT	T	4.172e^-6	0.011	UPSTREAM Act5C INTRON Act5C	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_Trl
2L	4551812	2L_4551812_SNP [dm3] 2L_4551812_SNP [dm6]	A	G	4.176e^-6	0.011	INTRON dp
2L	5458360	2L_5458360_SNP [dm3] 2L_5458360_SNP [dm6]	C	G	4.176e^-6	0.011	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_slp1 mE1_TFBS_HSA
2L	7989834	2L_7989834_SNP [dm3] 2L_7989834_SNP [dm6]	C	T	4.176e^-6	0.011	INTRON pes	TF binding site mE1_TFBS_inv
X	5283251	X_5283251_SNP [dm3] X_5389218_SNP [dm6]	A	T	4.176e^-6	0.011	INTRON SK	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
X	13984289	X_13984289_SNP [dm3] X_14090256_SNP [dm6]	A	G	4.219e^-6	0.011	INTERGENIC
2L	9138793	2L_9138793_SNP [dm3] 2L_9138793_SNP [dm6]	C	T	4.226e^-6	0.011	INTRON CG32982	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_HSA mE1_TFBS_sens
X	14331720	X_14331720_INS [dm3] X_14437687_INS [dm6]	T	TT	4.254e^-6	0.011	INTRON dpr8
X	14331738	X_14331738_SNP [dm3] X_14437705_SNP [dm6]	A	G	4.254e^-6	0.011	INTRON dpr8
3R	5825072	3R_5825072_SNP [dm3] 3R_9999350_SNP [dm6]	G	A	4.277e^-6	0.011	SYNONYMOUS_CODING Spn85F DOWNSTREAM CG5359	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2L	1644458	2L_1644458_SNP [dm3] 2L_1644458_SNP [dm6]	T	C	4.291e^-6	0.011	INTERGENIC	TF binding site BDTNP1_TFBS_dl mE1_TFBS_ftz_f1 mE1_TFBS_HSA
2L	1646258	2L_1646258_SNP [dm3] 2L_1646258_SNP [dm6]	C	T	4.291e^-6	0.011	DOWNSTREAM CR45695 INTERGENIC
2L	10385734	2L_10385734_SNP [dm3] 2L_10385734_SNP [dm6]	T	C	4.313e^-6	0.011	UPSTREAM mRpS7 INTRON cdc2	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
2R	17144452	2R_17144452_SNP [dm3] 2R_21256947_SNP [dm6]	T	C	4.350e^-6	0.011	INTRON Rgk3
3R	5085234	3R_5085234_DEL [dm3] 3R_9259512_DEL [dm6]	ATA	A	4.378e^-6	0.011	INTRON CG8436	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	10878560	3R_10878560_SNP [dm3] 3R_15052838_SNP [dm6]	C	T	4.380e^-6	0.011	INTERGENIC
3R	10878563	3R_10878563_SNP [dm3] 3R_15052841_SNP [dm6]	A	C	4.380e^-6	0.011	INTERGENIC
X	7859988	X_7859988_SNP [dm3] X_7965955_SNP [dm6]	T	G	4.392e^-6	0.011	INTRON sn & 1 other	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_sna mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_HSA
2L	6585743	2L_6585743_SNP [dm3] 2L_6585743_SNP [dm6]	C	A	4.401e^-6	0.011	INTRON CG11319
2L	3626806	2L_3626806_SNP [dm3] 2L_3626806_SNP [dm6]	C	T	4.405e^-6	0.011	SYNONYMOUS_CODING for INTRON for	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA mE1_TFBS_sens
X	5082790	X_5082790_SNP [dm3] X_5188757_SNP [dm6]	C	T	4.426e^-6	0.011	INTRON rg & 1 other EXON CR44834
2R	10352316	2R_10352316_SNP [dm3] 2R_14464811_SNP [dm6]	C	T	4.446e^-6	0.011	SYNONYMOUS_CODING Oaz	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_sens
2R	21133804	2R_21133804_SNP [dm3] 2R_25246281_SNP [dm6]	A	C	4.449e^-6	0.011	UPSTREAM CG30429 INTRON CG9380	TF binding site BDTNP1_TFBS_hb
2L	15032981	2L_15032981_SNP [dm3] 2L_15032981_SNP [dm6]	T	A	4.452e^-6	0.011	UTR_3_PRIME GABA-B-R1
X	11656117	X_11656117_SNP [dm3] X_11762084_SNP [dm6]	G	A	4.493e^-6	0.011	INTRON m
2R	15210041	2R_15210041_SNP [dm3] 2R_19322536_SNP [dm6]	A	G	4.496e^-6	0.011	INTRON Rgk1
3L	14652592	3L_14652592_SNP [dm3] 3L_14659492_SNP [dm6]	G	T	4.500e^-6	0.011	INTRON dlp	TF binding site BDTNP1_TFBS_twi
3R	12896174	3R_12896174_SNP [dm3] 3R_17070452_SNP [dm6]	A	G	4.506e^-6	0.011	DOWNSTREAM Ns1 & 1 other INTERGENIC
2R	14625255	2R_14625255_SNP [dm3] 2R_18737750_SNP [dm6]	G	A	4.528e^-6	0.011	UPSTREAM CG33998 INTRON Hs3st-A
2R	9730374	2R_9730374_SNP [dm3] 2R_13842869_SNP [dm6]	C	A	4.529e^-6	0.011	UTR_3_PRIME Syngr
X	10859600	X_10859600_SNP [dm3] X_10965567_SNP [dm6]	T	C	4.529e^-6	0.011	INTRON C901	TF binding site mE1_TFBS_chinmo
2R	6047992	2R_6047992_DEL [dm3] 2R_10160487_DEL [dm6]	CC	T	4.551e^-6	0.011	INTRON KCNQ	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA mE1_TFBS_Trl
3L	16310791	3L_16310791_SNP [dm3] 3L_16317691_SNP [dm6]	A	T	4.653e^-6	0.011	UPSTREAM Nplp3 INTERGENIC
3L	11466458	3L_11466458_SNP [dm3] 3L_11473358_SNP [dm6]	A	G	4.655e^-6	0.011	UPSTREAM Vha16-3 INTRON Vha16-3	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
X	10860679	X_10860679_SNP [dm3] X_10966646_SNP [dm6]	A	G	4.695e^-6	0.011	INTRON C901
2R	15781035	2R_15781035_SNP [dm3] 2R_19893530_SNP [dm6]	C	G	4.749e^-6	0.011	INTERGENIC	TF binding site BDTNP1_TFBS_da mE1_TFBS_HSA
2R	12726132	2R_12726132_SNP [dm3] 2R_16838627_SNP [dm6]	C	T	4.760e^-6	0.011	EXON CR43650	TF binding site BDTNP1_TFBS_Med
2L	1846011	2L_1846011_SNP [dm3] 2L_1846011_SNP [dm6]	G	C	4.777e^-6	0.012	INTRON wry
2R	8352335	2R_8352335_SNP [dm3] 2R_12464830_SNP [dm6]	C	A	4.839e^-6	0.012	SYNONYMOUS_CODING Lac DOWNSTREAM dgt5	TF binding site mE1_TFBS_chinmo
2L	7468953	2L_7468953_SNP [dm3] 2L_7468953_SNP [dm6]	A	T	4.839e^-6	0.012	INTRON CG6055
3L	11950913	3L_11950913_SNP [dm3] 3L_11957813_SNP [dm6]	T	C	4.848e^-6	0.012	UPSTREAM CG43294 & 1 other INTERGENIC
3L	6273133	3L_6273133_SNP [dm3] 3L_6280033_SNP [dm6]	C	T	4.848e^-6	0.012	INTERGENIC
2R	11353290	2R_11353290_SNP [dm3] 2R_15465785_SNP [dm6]	A	T	4.860e^-6	0.012	INTRON CG43729
2R	15206882	2R_15206882_SNP [dm3] 2R_19319377_SNP [dm6]	A	G	4.921e^-6	0.012	INTRON Rgk1
3L	2989358	3L_2989358_INS [dm3] 3L_2989358_INS [dm6]	A	ATACA	4.922e^-6	0.012	INTERGENIC
3R	16116624	3R_16116624_SNP [dm3] 3R_20290902_SNP [dm6]	C	A	4.938e^-6	0.012	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
X	22079570	X_22079570_DEL [dm3] X_22677734_DEL [dm6]	GTTCGTGAGAATGTCAG...	G	4.961e^-6	0.012	INTRON CR44997	TF binding site mE1_TFBS_HSA
X	22079604	X_22079604_SNP [dm3] X_22677768_SNP [dm6]	C	T	4.961e^-6	0.012	INTRON CR44997	TF binding site mE1_TFBS_HSA
3R	5219432	3R_5219432_SNP [dm3] 3R_9393710_SNP [dm6]	A	T	4.976e^-6	0.012	INTRON FER	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_z mE1_TFBS_Trl
2L	13757301	2L_13757301_DEL [dm3] 2L_13757301_DEL [dm6]	GG	G	4.994e^-6	0.012	DOWNSTREAM CR44846 INTRON TM9SF4
2R	8888908	2R_8888908_SNP [dm3] 2R_13001403_SNP [dm6]	C	T	4.994e^-6	0.012	SYNONYMOUS_CODING Su_z_2	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
2R	8891159	2R_8891159_SNP [dm3] 2R_13003654_SNP [dm6]	G	A	4.994e^-6	0.012	NON_SYNONYMOUS_CODING Su_z_2	TF binding site mE1_TFBS_chinmo
2L	12203410	2L_12203410_SNP [dm3] 2L_12203410_SNP [dm6]	C	T	4.998e^-6	0.012	INTRON aret
3L	13199067	3L_13199067_SNP [dm3] 3L_13205967_SNP [dm6]	A	G	5.000e^-6	0.012	INTERGENIC
2L	904242	2L_904242_SNP [dm3] 2L_904242_SNP [dm6]	G	A	5.016e^-6	0.012	EXON CR45261
3R	10878568	3R_10878568_SNP [dm3] 3R_15052846_SNP [dm6]	A	C	5.033e^-6	0.012	INTERGENIC
3R	3149013	3R_3149013_SNP [dm3] 3R_7323291_SNP [dm6]	A	C	5.053e^-6	0.012	INTERGENIC
3R	3149365	3R_3149365_SNP [dm3] 3R_7323643_SNP [dm6]	C	A	5.053e^-6	0.012	INTERGENIC
3R	3164632	3R_3164632_SNP [dm3] 3R_7338910_SNP [dm6]	G	T	5.053e^-6	0.012	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3R	3169411	3R_3169411_SNP [dm3] 3R_7343689_SNP [dm6]	A	C	5.053e^-6	0.012	INTERGENIC	TF binding site mE1_TFBS_cnc
3R	3173136	3R_3173136_SNP [dm3] 3R_7347414_SNP [dm6]	A	C	5.053e^-6	0.012	SYNONYMOUS_CODING nxf4	TF binding site mE1_TFBS_sens
3R	3192710	3R_3192710_SNP [dm3] 3R_7366988_SNP [dm6]	A	T	5.053e^-6	0.012	NON_SYNONYMOUS_CODING MstProx DOWNSTREAM Mst84Da	TF binding site mE1_TFBS_eve mE1_TFBS_HSA
3R	3199024	3R_3199024_SNP [dm3] 3R_7373302_SNP [dm6]	A	C	5.053e^-6	0.012	INTERGENIC
3L	19957008	3L_19957008_SNP [dm3] 3L_19963908_SNP [dm6]	T	A	5.115e^-6	0.012	INTRON Ac76E
3R	5822218	3R_5822218_SNP [dm3] 3R_9996496_SNP [dm6]	T	C	5.115e^-6	0.012	SYNONYMOUS_CODING Gr85a UPSTREAM Spn85F	TF binding site mE1_TFBS_sens
2R	3339636	2R_3339636_SNP [dm3] 2R_7452131_SNP [dm6]	T	C	5.124e^-6	0.012	UPSTREAM fa2h EXON CR45320	TF binding site mE1_TFBS_cad
2R	8939945	2R_8939945_SNP [dm3] 2R_13052440_SNP [dm6]	C	T	5.170e^-6	0.012	INTERGENIC
X	20562195	X_20562195_SNP [dm3] X_20691168_SNP [dm6]	T	G	5.191e^-6	0.012	UPSTREAM CR45610 INTRON run	regulatory region FlyBase REDfly_CRMs silencer mE1_HDAC_PRE TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_Kr mE1_TFBS_sens
X	4928472	X_4928472_SNP [dm3] X_5034439_SNP [dm6]	T	A	5.202e^-6	0.012	INTRON CR44833
X	14331815	X_14331815_SNP [dm3] X_14437782_SNP [dm6]	A	G	5.217e^-6	0.012	INTRON dpr8
2R	11472381	2R_11472381_SNP [dm3] 2R_15584876_SNP [dm6]	G	C	5.228e^-6	0.012	INTERGENIC
2L	18900107	2L_18900107_DEL [dm3] 2L_18900107_DEL [dm6]	GAACATTTACTTT...	G	5.320e^-6	0.012	EXON CR44739	TF binding site mE1_TFBS_cnc mE1_TFBS_HSA
2L	15192796	2L_15192796_SNP [dm3] 2L_15192796_SNP [dm6]	T	A	5.333e^-6	0.012	INTRON CG4168
3L	18601617	3L_18601617_SNP [dm3] 3L_18608517_SNP [dm6]	G	A	5.367e^-6	0.012	NON_SYNONYMOUS_CODING CG18231 INTRON CG4174 & 1 other
2L	13755698	2L_13755698_SNP [dm3] 2L_13755698_SNP [dm6]	T	G	5.415e^-6	0.012	INTRON CR44846 & 1 other
2L	13759931	2L_13759931_SNP [dm3] 2L_13759931_SNP [dm6]	T	A	5.415e^-6	0.012	INTRON TM9SF4
3R	2016520	3R_2016520_SNP [dm3] 3R_6190798_SNP [dm6]	G	C	5.423e^-6	0.012	INTRON NPFR	TF binding site mE1_TFBS_inv
3L	11389243	3L_11389243_INS [dm3] 3L_11396143_INS [dm6]	A	AACAAA	5.435e^-6	0.012	DOWNSTREAM CG11726 INTERGENIC
3R	4883149	3R_4883149_SNP [dm3] 3R_9057427_SNP [dm6]	A	C	5.450e^-6	0.012	INTRON Kdm2	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_kn mE1_TFBS_Trl
3R	3227065	3R_3227065_DEL [dm3] 3R_7401343_DEL [dm6]	GGCTGGCCAGCCA...	G	5.462e^-6	0.012	INTERGENIC
X	7103736	X_7103736_SNP [dm3] X_7209703_SNP [dm6]	G	A	5.473e^-6	0.012	INTRON CR44357 & 1 other
2L	9167622	2L_9167622_DEL [dm3] 2L_9167622_DEL [dm6]	AA	A	5.522e^-6	0.013	INTRON tai	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
3R	20701852	3R_20701852_SNP [dm3] 3R_24876130_SNP [dm6]	G	A	5.529e^-6	0.013	UTR_5_PRIME CG3744 UPSTREAM CG11089 & 1 other INTRON CG3744	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_HSA
2R	4466542	2R_4466542_SNP [dm3] 2R_8579037_SNP [dm6]	C	A	5.558e^-6	0.013	UPSTREAM CG42326 INTRON CG42326
2R	11586353	2R_11586353_SNP [dm3] 2R_15698848_SNP [dm6]	C	T	5.574e^-6	0.013	UTR_3_PRIME CG42662 & 1 other DOWNSTREAM CG33462	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA
X	8809793	X_8809793_SNP [dm3] X_8915760_SNP [dm6]	A	C	5.631e^-6	0.013	INTRON rdgA
X	14391896	X_14391896_DEL [dm3] X_14497863_DEL [dm6]	ACACGCACATTTA...	A	5.641e^-6	0.013	DOWNSTREAM CG12540 INTERGENIC
3R	15076771	3R_15076771_SNP [dm3] 3R_19251049_SNP [dm6]	A	G	5.698e^-6	0.013	INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
3R	5025518	3R_5025518_SNP [dm3] 3R_9199796_SNP [dm6]	A	G	5.778e^-6	0.013	INTRON pum
3R	25197603	3R_25197603_DEL [dm3] 3R_29371881_DEL [dm6]	CGTTT	C	5.855e^-6	0.013	INTERGENIC
3L	11950967	3L_11950967_SNP [dm3] 3L_11957867_SNP [dm6]	A	G	5.878e^-6	0.013	UPSTREAM CG43294 & 1 other INTERGENIC
2L	13757379	2L_13757379_SNP [dm3] 2L_13757379_SNP [dm6]	C	T	5.914e^-6	0.013	DOWNSTREAM CR44846 INTRON TM9SF4
2L	13081825	2L_13081825_SNP [dm3] 2L_13081825_SNP [dm6]	G	T	5.928e^-6	0.013	INTERGENIC
2L	1638618	2L_1638618_SNP [dm3] 2L_1638618_SNP [dm6]	C	T	5.947e^-6	0.013	INTERGENIC
2R	4268655	2R_4268655_SNP [dm3] 2R_8381150_SNP [dm6]	T	C	5.959e^-6	0.013	INTRON pdm3	TF binding site BDTNP1_TFBS_dl mE1_TFBS_HSA
3R	12517739	3R_12517739_SNP [dm3] 3R_16692017_SNP [dm6]	A	T	5.971e^-6	0.013	INTRON Ubx	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	10355264	3L_10355264_SNP [dm3] 3L_10362164_SNP [dm6]	T	A	5.972e^-6	0.013	EXON CR44327	TF binding site BDTNP1_TFBS_dl
3L	10232707	3L_10232707_SNP [dm3] 3L_10239607_SNP [dm6]	C	T	5.982e^-6	0.013	UPSTREAM CR45403 INTERGENIC
X	16619677	X_16619677_SNP [dm3] X_16725644_SNP [dm6]	G	T	5.983e^-6	0.013	INTRON CG32572
3L	12445433	3L_12445433_SNP [dm3] 3L_12452333_SNP [dm6]	C	T	5.993e^-6	0.013	INTERGENIC
2R	15204956	2R_15204956_SNP [dm3] 2R_19317451_SNP [dm6]	T	C	6.026e^-6	0.013	INTRON Rgk1
3R	16116427	3R_16116427_SNP [dm3] 3R_20290705_SNP [dm6]	G	A	6.080e^-6	0.014	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
2R	6676320	2R_6676320_SNP [dm3] 2R_10788815_SNP [dm6]	C	G	6.100e^-6	0.014	INTRON CG33144
2L	14587768	2L_14587768_SNP [dm3] 2L_14587768_SNP [dm6]	G	T	6.146e^-6	0.014	DOWNSTREAM CG42680 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv mE1_TFBS_Kr
2L	14587775	2L_14587775_SNP [dm3] 2L_14587775_SNP [dm6]	A	T	6.146e^-6	0.014	DOWNSTREAM CG42680 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_inv mE1_TFBS_Kr
2R	4311862	2R_4311862_MNP [dm3] 2R_8424357_MNP [dm6]	AGG	TTT	6.175e^-6	0.014	INTRON CSN7	TF binding site mE1_TFBS_chinmo
2R	12487477	2R_12487477_SNP [dm3] 2R_16599972_SNP [dm6]	A	G	6.182e^-6	0.014	SYNONYMOUS_CODING CG5089 INTRON CG8303
2R	8906878	2R_8906878_SNP [dm3] 2R_13019373_SNP [dm6]	G	A	6.183e^-6	0.014	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA
3L	21955541	3L_21955541_SNP [dm3] 3L_21962441_SNP [dm6]	G	C	6.185e^-6	0.014	NON_SYNONYMOUS_CODING CS-2 DOWNSTREAM CR45757	TF binding site mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_inv mE1_TFBS_sens
3R	3198340	3R_3198340_SNP [dm3] 3R_7372618_SNP [dm6]	A	C	6.222e^-6	0.014	INTERGENIC
X	13550968	X_13550968_INS [dm3] X_13656935_INS [dm6]	T	TATT	6.240e^-6	0.014	INTRON NFAT
3R	22358195	3R_22358195_SNP [dm3] 3R_26532473_SNP [dm6]	T	C	6.269e^-6	0.014	INTRON plum
3L	8704804	3L_8704804_SNP [dm3] 3L_8711704_SNP [dm6]	G	C	6.288e^-6	0.014	INTERGENIC	regulatory region REDfly_CRMs
3R	4442768	3R_4442768_SNP [dm3] 3R_8617046_SNP [dm6]	C	T	6.317e^-6	0.014	INTRON 5-HT2B	TF binding site mE1_TFBS_inv
3L	8582514	3L_8582514_SNP [dm3] 3L_8589414_SNP [dm6]	C	T	6.346e^-6	0.014	UPSTREAM CG43078 INTRON CG43078
2R	5613592	2R_5613592_SNP [dm3] 2R_9726087_SNP [dm6]	A	T	6.453e^-6	0.014	INTRON sqa
3L	14501103	3L_14501103_SNP [dm3] 3L_14508003_SNP [dm6]	T	C	6.457e^-6	0.014	NON_SYNONYMOUS_CODING bbg	TF binding site mE1_TFBS_cad mE1_TFBS_HSA
3L	17471788	3L_17471788_SNP [dm3] 3L_17478688_SNP [dm6]	A	G	6.476e^-6	0.014	NON_SYNONYMOUS_CODING CG13733 UPSTREAM qjt
2R	14427029	2R_14427029_SNP [dm3] 2R_18539524_SNP [dm6]	T	C	6.561e^-6	0.014	UPSTREAM Rgk2 DOWNSTREAM Pepck & 1 other INTERGENIC
2L	1009050	2L_1009050_SNP [dm3] 2L_1009050_SNP [dm6]	A	G	6.617e^-6	0.014	UTR_3_PRIME IA-2
2L	1009053	2L_1009053_SNP [dm3] 2L_1009053_SNP [dm6]	A	G	6.617e^-6	0.014	UTR_3_PRIME IA-2
2L	1139143	2L_1139143_SNP [dm3] 2L_1139143_SNP [dm6]	A	T	6.625e^-6	0.014	SYNONYMOUS_CODING CG4577	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	15206522	2R_15206522_SNP [dm3] 2R_19319017_SNP [dm6]	G	C	6.677e^-6	0.014	INTRON Rgk1
2R	12718683	2R_12718683_SNP [dm3] 2R_16831178_SNP [dm6]	G	A	6.744e^-6	0.015	UPSTREAM mir-8 EXON CR43650	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_HSA
2R	8891475	2R_8891475_SNP [dm3] 2R_13003970_SNP [dm6]	A	G	6.767e^-6	0.015	NON_SYNONYMOUS_CODING Su_z_2	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
2R	11586614	2R_11586614_SNP [dm3] 2R_15699109_SNP [dm6]	G	T	6.778e^-6	0.015	SYNONYMOUS_CODING CG42662 UTR_3_PRIME CG30080	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4775381	3L_4775381_SNP [dm3] 3L_4775381_SNP [dm6]	A	G	6.846e^-6	0.015	INTRON RhoGEF64C
3L	4775412	3L_4775412_SNP [dm3] 3L_4775412_SNP [dm6]	A	G	6.846e^-6	0.015	INTRON RhoGEF64C
X	15358594	X_15358594_SNP [dm3] X_15464561_SNP [dm6]	G	A	6.867e^-6	0.015	UTR_3_PRIME CG6294 UPSTREAM CG6299 INTRON CG6299 & 1 other	TF binding site mE1_TFBS_chinmo
2R	14758362	2R_14758362_SNP [dm3] 2R_18870857_SNP [dm6]	C	A	6.883e^-6	0.015	INTERGENIC
2R	5634977	2R_5634977_SNP [dm3] 2R_9747472_SNP [dm6]	T	A	6.964e^-6	0.015	UTR_5_PRIME sqa
2L	5550825	2L_5550825_SNP [dm3] 2L_5550825_SNP [dm6]	A	G	7.090e^-6	0.015	UTR_5_PRIME CG14014	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
X	4710682	X_4710682_SNP [dm3] X_4816649_SNP [dm6]	G	A	7.098e^-6	0.015	INTERGENIC
2L	18337130	2L_18337130_SNP [dm3] 2L_18337130_SNP [dm6]	G	A	7.134e^-6	0.015	INTRON Fas3	TF binding site BDTNP1_TFBS_da mE1_TFBS_D mE1_TFBS_HSA
2L	13760716	2L_13760716_SNP [dm3] 2L_13760716_SNP [dm6]	G	T	7.175e^-6	0.015	INTRON TM9SF4
2L	6753989	2L_6753989_SNP [dm3] 2L_6753989_SNP [dm6]	T	G	7.190e^-6	0.015	SYNONYMOUS_CODING CG11221	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3R	26072556	3R_26072556_SNP [dm3] 3R_30246834_SNP [dm6]	T	G	7.194e^-6	0.015	UPSTREAM CG9733 INTERGENIC
3R	16116447	3R_16116447_INS [dm3] 3R_20290725_INS [dm6]	C	TT	7.249e^-6	0.015	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3R	16116450	3R_16116450_SNP [dm3] 3R_20290728_SNP [dm6]	A	T	7.249e^-6	0.015	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
3R	16116452	3R_16116452_INS [dm3] 3R_20290730_INS [dm6]	G	GTGTTTTGAACAAA...	7.249e^-6	0.015	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
3R	16116457	3R_16116457_SNP [dm3] 3R_20290735_SNP [dm6]	G	A	7.249e^-6	0.015	INTRON cic	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_tll BDTNP1_TFBS_twi mE1_TFBS_cad
2R	4467745	2R_4467745_SNP [dm3] 2R_8580240_SNP [dm6]	A	T	7.312e^-6	0.016	INTRON CG42326
3L	4775403	3L_4775403_SNP [dm3] 3L_4775403_SNP [dm6]	G	T	7.325e^-6	0.016	INTRON RhoGEF64C
X	8549549	X_8549549_SNP [dm3] X_8655516_SNP [dm6]	G	A	7.346e^-6	0.016	INTERGENIC	regulatory region REDfly_CRMs TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_HSA mE1_TFBS_sens
2L	17005079	2L_17005079_SNP [dm3] 2L_17005079_SNP [dm6]	C	T	7.413e^-6	0.016	INTERGENIC
3R	8572212	3R_8572212_SNP [dm3] 3R_12746490_SNP [dm6]	A	C	7.476e^-6	0.016	UTR_3_PRIME beat-Vc
2R	1660199	2R_1660199_MNP [dm3] 2R_5772694_MNP [dm6]	TGCT	AAGC	7.492e^-6	0.016	UTR_3_PRIME Gp210 DOWNSTREAM Gp210	TF binding site BDTNP1_TFBS_dl
2R	1660205	2R_1660205_DEL [dm3] 2R_5772700_DEL [dm6]	ACGT	A	7.492e^-6	0.016	UTR_3_PRIME Gp210 DOWNSTREAM Gp210	TF binding site BDTNP1_TFBS_dl
3R	3303616	3R_3303616_SNP [dm3] 3R_7477894_SNP [dm6]	A	G	7.543e^-6	0.016	INTERGENIC	insulator Insulator_Class_I.mE01
3L	21957635	3L_21957635_SNP [dm3] 3L_21964535_SNP [dm6]	G	T	7.585e^-6	0.016	NON_SYNONYMOUS_CODING CS-2
X	14522862	X_14522862_SNP [dm3] X_14628829_SNP [dm6]	C	T	7.589e^-6	0.016	INTRON NetA	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_twi mE1_TFBS_cad mE1_TFBS_D mE1_TFBS_HSA mE1_TFBS_Kr
3L	5484108	3L_5484108_SNP [dm3] 3L_5491008_SNP [dm6]	C	A	7.603e^-6	0.016	INTERGENIC
X	19908402	X_19908402_SNP [dm3] X_20014369_SNP [dm6]	G	A	7.686e^-6	0.016	UPSTREAM Dop2R INTRON Dop2R
2R	2778906	2R_2778906_SNP [dm3] 2R_6891401_SNP [dm6]	A	C	7.759e^-6	0.016	UPSTREAM CG30158 INTERGENIC
3L	10722287	3L_10722287_SNP [dm3] 3L_10729187_SNP [dm6]	T	C	7.773e^-6	0.016	INTERGENIC
3R	27337388	3R_27337388_SNP [dm3] 3R_31511666_SNP [dm6]	C	T	7.780e^-6	0.016	INTERGENIC
X	14262307	X_14262307_SNP [dm3] X_14368274_SNP [dm6]	A	T	7.844e^-6	0.016	INTRON dpr8
2L	14587796	2L_14587796_SNP [dm3] 2L_14587796_SNP [dm6]	G	A	7.844e^-6	0.016	DOWNSTREAM CG42680 INTERGENIC	TF binding site mE1_TFBS_inv mE1_TFBS_Kr
X	16619402	X_16619402_SNP [dm3] X_16725369_SNP [dm6]	A	G	7.874e^-6	0.016	INTRON CG32572
2R	16758540	2R_16758540_SNP [dm3] 2R_20871035_SNP [dm6]	T	C	7.891e^-6	0.016	DOWNSTREAM IM14 INTRON Ipk1	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_HSA mE1_TFBS_Ubx
X	13731296	X_13731296_SNP [dm3] X_13837263_SNP [dm6]	C	A	7.934e^-6	0.016	UPSTREAM AMPdeam INTRON AMPdeam
3L	11166381	3L_11166381_SNP [dm3] 3L_11173281_SNP [dm6]	G	A	7.956e^-6	0.016	UPSTREAM CG14142 DOWNSTREAM CG7616 INTERGENIC
X	21009855	X_21009855_SNP [dm3] X_21138828_SNP [dm6]	G	A	7.956e^-6	0.016	SYNONYMOUS_CODING CG34120
X	21009861	X_21009861_SNP [dm3] X_21138834_SNP [dm6]	C	T	7.956e^-6	0.016	SYNONYMOUS_CODING CG34120
X	6523328	X_6523328_SNP [dm3] X_6629295_SNP [dm6]	C	T	7.956e^-6	0.016	INTRON pigs
2R	12528329	2R_12528329_INS [dm3] 2R_16640824_INS [dm6]	T	TCC	8.056e^-6	0.017	UPSTREAM Alk & 1 other INTERGENIC	enhancer mE1_CBP_Enhancers TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_gt BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_slp1 BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_eve mE1_TFBS_HSA
2R	8891500	2R_8891500_SNP [dm3] 2R_13003995_SNP [dm6]	C	T	8.066e^-6	0.017	SYNONYMOUS_CODING Su_z_2	TF binding site mE1_TFBS_chinmo mE1_TFBS_sens
3R	4876246	3R_4876246_SNP [dm3] 3R_9050524_SNP [dm6]	G	A	8.091e^-6	0.017	UTR_5_PRIME Nmdmc UPSTREAM Mst85C INTRON Mst85C	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_Med mE1_TFBS_cad mE1_TFBS_HSA
2L	13739723	2L_13739723_SNP [dm3] 2L_13739723_SNP [dm6]	T	C	8.138e^-6	0.017	INTERGENIC
2R	21133611	2R_21133611_SNP [dm3] 2R_25246088_SNP [dm6]	A	G	8.149e^-6	0.017	UPSTREAM CG30429 INTRON CG9380
2R	21133618	2R_21133618_SNP [dm3] 2R_25246095_SNP [dm6]	T	A	8.149e^-6	0.017	UPSTREAM CG30429 INTRON CG9380
2L	7063094	2L_7063094_SNP [dm3] 2L_7063094_SNP [dm6]	C	T	8.169e^-6	0.017	UTR_3_PRIME Mnn1 UPSTREAM Sem1 DOWNSTREAM Mnn1
3L	16478926	3L_16478926_SNP [dm3] 3L_16485826_SNP [dm6]	A	G	8.218e^-6	0.017	INTRON CG33158	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_D mE1_TFBS_HSA
2L	7105793	2L_7105793_SNP [dm3] 2L_7105793_SNP [dm6]	C	T	8.281e^-6	0.017	INTRON Pvf3
3L	14479215	3L_14479215_SNP [dm3] 3L_14486115_SNP [dm6]	C	A	8.382e^-6	0.017	INTRON bbg
3L	10242130	3L_10242130_SNP [dm3] 3L_10249030_SNP [dm6]	G	T	8.467e^-6	0.017	UPSTREAM CR44540 INTERGENIC
3L	10242147	3L_10242147_SNP [dm3] 3L_10249047_SNP [dm6]	T	G	8.467e^-6	0.017	UPSTREAM CR44540 INTERGENIC
2R	14399673	2R_14399673_SNP [dm3] 2R_18512168_SNP [dm6]	T	A	8.470e^-6	0.017	INTERGENIC
2R	2780747	2R_2780747_SNP [dm3] 2R_6893242_SNP [dm6]	A	G	8.687e^-6	0.018	INTRON CG30158
3R	2253577	3R_2253577_SNP [dm3] 3R_6427855_SNP [dm6]	C	G	8.870e^-6	0.018	INTRON gpp	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_prd BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3L	4614050	3L_4614050_SNP [dm3] 3L_4614050_SNP [dm6]	C	T	8.934e^-6	0.018	UPSTREAM Src64B INTRON Src64B	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_hkb mE1_TFBS_HSA mE1_TFBS_sens
3L	10514048	3L_10514048_DEL [dm3] 3L_10520948_DEL [dm6]	TT	T	8.936e^-6	0.018	INTRON A2bp1
3R	13550724	3R_13550724_SNP [dm3] 3R_17725002_SNP [dm6]	C	A	8.947e^-6	0.018	UTR_5_PRIME Atg8b UPSTREAM Lgr1
3L	2659427	3L_2659427_SNP [dm3] 3L_2659427_SNP [dm6]	A	C	8.988e^-6	0.018	UPSTREAM CG33233 INTRON Fife	TF binding site mE1_TFBS_chinmo
3L	903023	3L_903023_SNP [dm3] 3L_903023_SNP [dm6]	C	T	9.059e^-6	0.018	SYNONYMOUS_CODING CG13905	TF binding site mE1_TFBS_sens
X	16619821	X_16619821_SNP [dm3] X_16725788_SNP [dm6]	T	G	9.074e^-6	0.018	INTRON CG32572
2R	8876288	2R_8876288_SNP [dm3] 2R_12988783_SNP [dm6]	C	T	9.088e^-6	0.018	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	258057	3L_258057_SNP [dm3] 3L_258057_SNP [dm6]	G	A	9.214e^-6	0.019	UPSTREAM wac & 1 other DOWNSTREAM Tudor-SN INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_GATAe mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_Ubx
3R	8477505	3R_8477505_SNP [dm3] 3R_12651783_SNP [dm6]	A	C	9.223e^-6	0.019	NON_SYNONYMOUS_CODING Dtg	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	7651424	3R_7651424_SNP [dm3] 3R_11825702_SNP [dm6]	T	C	9.276e^-6	0.019	INTRON CG6959
3L	3658870	3L_3658870_SNP [dm3] 3L_3658870_SNP [dm6]	A	G	9.358e^-6	0.019	UPSTREAM CG43098 INTERGENIC
X	4998689	X_4998689_SNP [dm3] X_5104656_SNP [dm6]	G	C	9.441e^-6	0.019	INTRON rg & 1 other
2R	12122463	2R_12122463_SNP [dm3] 2R_16234958_SNP [dm6]	C	G	9.445e^-6	0.019	UPSTREAM CG7786 DOWNSTREAM CG15701 INTERGENIC	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo mE1_TFBS_HSA
2R	19364924	2R_19364924_SNP [dm3] 2R_23477401_SNP [dm6]	C	G	9.470e^-6	0.019	UPSTREAM CG13557 DOWNSTREAM CR43792 INTRON CG43795 EXON CR43793
2R	19366329	2R_19366329_SNP [dm3] 2R_23478806_SNP [dm6]	C	T	9.470e^-6	0.019	INTRON CG43795
2R	19366355	2R_19366355_SNP [dm3] 2R_23478832_SNP [dm6]	G	A	9.470e^-6	0.019	INTRON CG43795
3R	8477754	3R_8477754_SNP [dm3] 3R_12652032_SNP [dm6]	G	A	9.523e^-6	0.019	NON_SYNONYMOUS_CODING Dtg	TF binding site mE1_TFBS_sens
3L	14481779	3L_14481779_SNP [dm3] 3L_14488679_SNP [dm6]	A	G	9.529e^-6	0.019	INTRON bbg	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_HSA
3L	2315501	3L_2315501_SNP [dm3] 3L_2315501_SNP [dm6]	G	A	9.562e^-6	0.019	INTERGENIC
3L	2704625	3L_2704625_SNP [dm3] 3L_2704625_SNP [dm6]	A	C	9.562e^-6	0.019	INTRON Fife
X	20568566	X_20568566_SNP [dm3] X_20697539_SNP [dm6]	A	G	9.575e^-6	0.019	DOWNSTREAM run INTERGENIC	regulatory region FlyBase REDfly_CRMs TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_prd BDTNP1_TFBS_twi
2R	8876287	2R_8876287_SNP [dm3] 2R_12988782_SNP [dm6]	T	A	9.618e^-6	0.019	INTERGENIC	TF binding site BDTNP1_TFBS_dl
3L	12358202	3L_12358202_SNP [dm3] 3L_12365102_SNP [dm6]	A	T	9.631e^-6	0.019	INTERGENIC
2R	9284793	2R_9284793_SNP [dm3] 2R_13397288_SNP [dm6]	G	C	9.653e^-6	0.019	SYNONYMOUS_CODING CG4744	TF binding site mE1_TFBS_sens
2R	9288601	2R_9288601_SNP [dm3] 2R_13401096_SNP [dm6]	C	G	9.653e^-6	0.019	INTERGENIC
3R	16342239	3R_16342239_SNP [dm3] 3R_20516517_SNP [dm6]	T	C	9.653e^-6	0.019	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_sbb
X	20510574	X_20510574_SNP [dm3] X_20639547_SNP [dm6]	C	G	9.653e^-6	0.019	INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_sna BDTNP1_TFBS_twi mE1_TFBS_HSA
3R	1698650	3R_1698650_SNP [dm3] 3R_5872928_SNP [dm6]	T	G	9.671e^-6	0.019	INTRON CG34113
3L	4529063	3L_4529063_SNP [dm3] 3L_4529063_SNP [dm6]	A	G	9.681e^-6	0.019	INTRON Tie
3R	3161111	3R_3161111_SNP [dm3] 3R_7335389_SNP [dm6]	G	A	9.684e^-6	0.019	INTERGENIC
3L	2683126	3L_2683126_SNP [dm3] 3L_2683126_SNP [dm6]	T	C	9.801e^-6	0.019	INTRON Fife
X	4644700	X_4644700_SNP [dm3] X_4750667_SNP [dm6]	C	T	9.830e^-6	0.019	INTERGENIC
3R	5602348	3R_5602348_SNP [dm3] 3R_9776626_SNP [dm6]	C	T	9.941e^-6	0.019	SYNONYMOUS_CODING topi	TF binding site mE1_TFBS_chinmo mE1_TFBS_HSA
X	8737994	X_8737994_SNP [dm3] X_8843961_SNP [dm6]	A	C	9.943e^-6	0.019	INTRON CG12075
X	8737996	X_8737996_SNP [dm3] X_8843963_SNP [dm6]	G	A	9.943e^-6	0.019	INTRON CG12075
X	19593344	X_19593344_INS [dm3] X_19699311_INS [dm6]	A	ACAGAA	9.952e^-6	0.019	UTR_3_PRIME Cdc42 DOWNSTREAM CG14231 & 1 other
3R	2454956	3R_2454956_SNP [dm3] 3R_6629234_SNP [dm6]	C	G	9.965e^-6	0.019	UTR_5_PRIME CG15177 UPSTREAM sunz	TF binding site mE1_TFBS_HSA mE1_TFBS_sens
3R	3295695	3R_3295695_SNP [dm3] 3R_7469973_SNP [dm6]	T	A	9.973e^-6	0.019	INTERGENIC
3R	15862757	3R_15862757_SNP [dm3] 3R_20037035_SNP [dm6]	T	A	1.009e^-5	0.02	UTR_3_PRIME CG17193 UPSTREAM CG10889
2R	15204509	2R_15204509_SNP [dm3] 2R_19317004_SNP [dm6]	C	T	1.014e^-5	0.02	INTRON Rgk1
2R	4467736	2R_4467736_SNP [dm3] 2R_8580231_SNP [dm6]	T	G	1.019e^-5	0.02	INTRON CG42326
2R	14399718	2R_14399718_SNP [dm3] 2R_18512213_SNP [dm6]	C	G	1.023e^-5	0.02	INTERGENIC
3R	11649862	3R_11649862_SNP [dm3] 3R_15824140_SNP [dm6]	C	A	1.034e^-5	0.02	UTR_3_PRIME rec DOWNSTREAM rec & 1 other
2R	10457922	2R_10457922_SNP [dm3] 2R_14570417_SNP [dm6]	A	T	1.036e^-5	0.02	DOWNSTREAM LamC INTRON ttv
2L	7093210	2L_7093210_SNP [dm3] 2L_7093210_SNP [dm6]	G	A	1.043e^-5	0.02	INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_inv
X	15358598	X_15358598_SNP [dm3] X_15464565_SNP [dm6]	T	C	1.044e^-5	0.02	UTR_3_PRIME CG6294 UPSTREAM CG6299 INTRON CG6299 & 1 other	TF binding site mE1_TFBS_chinmo
3R	10878671	3R_10878671_SNP [dm3] 3R_15052949_SNP [dm6]	A	G	1.050e^-5	0.02	INTERGENIC
3R	24388578	3R_24388578_DEL [dm3] 3R_28562856_DEL [dm6]	GTTAG	G	1.053e^-5	0.02	INTERGENIC	TF binding site BDTNP1_TFBS_dl BDTNP1_TFBS_twi
3R	1765384	3R_1765384_SNP [dm3] 3R_5939662_SNP [dm6]	C	T	1.057e^-5	0.02	UTR_5_PRIME CG34113
2R	14979437	2R_14979437_SNP [dm3] 2R_19091932_SNP [dm6]	T	G	1.064e^-5	0.021	INTRON 5-HT1A
2R	15207756	2R_15207756_SNP [dm3] 2R_19320251_SNP [dm6]	T	G	1.065e^-5	0.021	INTRON Rgk1
2R	8842853	2R_8842853_SNP [dm3] 2R_12955348_SNP [dm6]	C	T	1.067e^-5	0.021	UTR_3_PRIME CG13321 DOWNSTREAM CG13321	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl
3R	17141018	3R_17141018_SNP [dm3] 3R_21315296_SNP [dm6]	G	A	1.068e^-5	0.021	EXON Hsromega	TF binding site mE1_TFBS_HSA mE1_TFBS_zfh1
2L	12771147	2L_12771147_SNP [dm3] 2L_12771147_SNP [dm6]	T	G	1.070e^-5	0.021	INTERGENIC
3L	215071	3L_215071_SNP [dm3] 3L_215071_SNP [dm6]	T	C	1.071e^-5	0.021	SYNONYMOUS_CODING CG16940
2L	13256187	2L_13256187_SNP [dm3] 2L_13256187_SNP [dm6]	C	G	1.074e^-5	0.021	SYNONYMOUS_CODING CG31728	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
2L	9547725	2L_9547725_SNP [dm3] 2L_9547725_SNP [dm6]	T	C	1.075e^-5	0.021	UTR_3_PRIME jp DOWNSTREAM jp & 1 other
3L	3471595	3L_3471595_SNP [dm3] 3L_3471595_SNP [dm6]	C	A	1.078e^-5	0.021	UTR_3_PRIME CG32267 UPSTREAM CG14971 & 1 other	TF binding site mE1_TFBS_HSA
3L	3472423	3L_3472423_SNP [dm3] 3L_3472423_SNP [dm6]	C	T	1.078e^-5	0.021	UPSTREAM CG42324 & 1 other INTERGENIC
3L	3472593	3L_3472593_SNP [dm3] 3L_3472593_SNP [dm6]	A	T	1.078e^-5	0.021	UTR_5_PRIME CG42324 UPSTREAM CG32267
2L	22666568	2L_22666568_SNP [dm3] 2L_22773836_SNP [dm6]	G	A	1.082e^-5	0.021	INTERGENIC
X	5068772	X_5068772_SNP [dm3] X_5174739_SNP [dm6]	T	G	1.082e^-5	0.021	INTRON rg & 1 other
2L	18624516	2L_18624516_SNP [dm3] 2L_18624516_SNP [dm6]	C	T	1.087e^-5	0.021	INTRON MESR3
2R	15039991	2R_15039991_SNP [dm3] 2R_19152486_SNP [dm6]	G	T	1.093e^-5	0.021	INTRON ena
3R	18666004	3R_18666004_SNP [dm3] 3R_22840282_SNP [dm6]	A	T	1.111e^-5	0.021	INTERGENIC
3R	16116401	3R_16116401_SNP [dm3] 3R_20290679_SNP [dm6]	T	A	1.111e^-5	0.021	INTRON cic	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_ftz BDTNP1_TFBS_Med BDTNP1_TFBS_twi mE1_TFBS_cad
3R	16115067	3R_16115067_SNP [dm3] 3R_20289345_SNP [dm6]	T	C	1.115e^-5	0.021	SYNONYMOUS_CODING cic	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi mE1_TFBS_chinmo mE1_TFBS_HSA
2R	12718907	2R_12718907_SNP [dm3] 2R_16831402_SNP [dm6]	C	T	1.120e^-5	0.021	UPSTREAM mir-8 EXON CR43650	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cad mE1_TFBS_HSA
X	7974990	X_7974990_SNP [dm3] X_8080957_SNP [dm6]	A	T	1.123e^-5	0.021	INTRON CG2254	TF binding site BDTNP1_TFBS_dl
2L	5624967	2L_5624967_SNP [dm3] 2L_5624967_SNP [dm6]	C	T	1.137e^-5	0.022	INTERGENIC
2R	17059114	2R_17059114_SNP [dm3] 2R_21171609_SNP [dm6]	T	C	1.139e^-5	0.022	UPSTREAM LSm1 INTRON Xpd	TF binding site BDTNP1_TFBS_dl mE1_TFBS_cad mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_sens mE1_TFBS_Ubx
2L	3856009	2L_3856009_SNP [dm3] 2L_3856009_SNP [dm6]	C	A	1.142e^-5	0.022	DOWNSTREAM CR45450 INTERGENIC	TF binding site mE1_TFBS_HSA mE1_TFBS_Trl
3L	8509120	3L_8509120_SNP [dm3] 3L_8516020_SNP [dm6]	C	G	1.146e^-5	0.022	SYNONYMOUS_CODING CG6765	TF binding site mE1_TFBS_cad mE1_TFBS_chinmo
3L	1190618	3L_1190618_SNP [dm3] 3L_1190618_SNP [dm6]	G	C	1.147e^-5	0.022	UTR_3_PRIME Trh DOWNSTREAM CG13912
3L	258139	3L_258139_DEL [dm3] 3L_258139_DEL [dm6]	TT	T	1.157e^-5	0.022	UPSTREAM wac & 1 other DOWNSTREAM Tudor-SN INTERGENIC	TF binding site BDTNP1_TFBS_bcd BDTNP1_TFBS_dl BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi mE1_TFBS_bab1 mE1_TFBS_D mE1_TFBS_h mE1_TFBS_HSA mE1_TFBS_jumu mE1_TFBS_Ubx
3L	5330553	3L_5330553_SNP [dm3] 3L_5337453_SNP [dm6]	G	A	1.160e^-5	0.022	INTERGENIC
2R	11484046	2R_11484046_SNP [dm3] 2R_15596541_SNP [dm6]	G	T	1.166e^-5	0.022	INTERGENIC
X	13442900	X_13442900_SNP [dm3] X_13548867_SNP [dm6]	A	T	1.180e^-5	0.022	INTERGENIC
3R	15815340	3R_15815340_SNP [dm3] 3R_19989618_SNP [dm6]	C	A	1.186e^-5	0.022	INTRON Hs6st
3L	14479213	3L_14479213_SNP [dm3] 3L_14486113_SNP [dm6]	A	G	1.205e^-5	0.023	INTRON bbg
3L	270798	3L_270798_SNP [dm3] 3L_270798_SNP [dm6]	A	C	1.211e^-5	0.023	UPSTREAM miple2 DOWNSTREAM miple INTERGENIC	TF binding site BDTNP1_TFBS_da BDTNP1_TFBS_dl BDTNP1_TFBS_hb BDTNP1_TFBS_Med BDTNP1_TFBS_slp1 BDTNP1_TFBS_twi BDTNP1_TFBS_z mE1_TFBS_cnc mE1_TFBS_HSA mE1_TFBS_Trl
2L	4724134	2L_4724134_SNP [dm3] 2L_4724134_SNP [dm6]	C	T	1.227e^-5	0.023	INTERGENIC
3L	12649955	3L_12649955_SNP [dm3] 3L_12656855_SNP [dm6]	T	G	1.236e^-5	0.023	INTERGENIC
2R	11994748	2R_11994748_SNP [dm3] 2R_16107243_SNP [dm6]	C	T	1.242e^-5	0.023	DOWNSTREAM Ric & 1 other INTERGENIC
2L	15034312	2L_15034312_SNP [dm3] 2L_15034312_SNP [dm6]	A	G	1.257e^-5	0.023	UTR_3_PRIME GABA-B-R1 DOWNSTREAM GABA-B-R1
3R	8527747	3R_8527747_SNP [dm3] 3R_12702025_SNP [dm6]	G	C	1.259e^-5	0.023	INTRON Past1	TF binding site mE1_TFBS_HSA mE1_TFBS_sens

By genomic position
Variant impact
Gene name

Microbiota_OTU020 phenotype

Phenotype distribution and association to known covariates

QQplot

Manhattan plot

GWAS results